View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8905A_low_40 (Length: 373)

Name: NF8905A_low_40
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8905A_low_40
NF8905A_low_40
[»] chr7 (34 HSPs)
chr7 (8-373)||(39930916-39931282)
chr7 (108-353)||(36363991-36364236)
chr7 (113-311)||(4937553-4937751)
chr7 (110-311)||(17721152-17721353)
chr7 (113-311)||(234863-235061)
chr7 (118-311)||(11276678-11276871)
chr7 (118-311)||(29968491-29968684)
chr7 (125-308)||(31423122-31423305)
chr7 (57-162)||(9978664-9978769)
chr7 (144-311)||(47877500-47877666)
chr7 (117-189)||(13553613-13553685)
chr7 (178-308)||(37255278-37255408)
chr7 (144-297)||(25018774-25018927)
chr7 (79-189)||(18768047-18768157)
chr7 (60-277)||(6335776-6335993)
chr7 (133-278)||(17056079-17056224)
chr7 (111-189)||(32815738-32815816)
chr7 (120-189)||(34457590-34457659)
chr7 (109-189)||(9895537-9895617)
chr7 (170-289)||(17504041-17504160)
chr7 (170-289)||(17549054-17549173)
chr7 (118-289)||(19544832-19545003)
chr7 (103-278)||(27218537-27218712)
chr7 (106-297)||(45164977-45165168)
chr7 (144-258)||(41805215-41805328)
chr7 (125-189)||(11341435-11341500)
chr7 (116-189)||(23887722-23887795)
chr7 (116-189)||(23898898-23898971)
chr7 (118-189)||(19735157-19735229)
chr7 (133-189)||(22819162-22819218)
chr7 (107-183)||(587530-587606)
chr7 (79-203)||(5327388-5327512)
chr7 (217-297)||(11341327-11341407)
chr7 (147-191)||(15653166-15653210)
[»] scaffold1350 (1 HSPs)
scaffold1350 (79-314)||(58-293)
[»] scaffold0034 (1 HSPs)
scaffold0034 (113-311)||(105268-105466)
[»] chr8 (34 HSPs)
chr8 (113-311)||(7924903-7925101)
chr8 (113-311)||(8300320-8300518)
chr8 (113-311)||(41664793-41664991)
chr8 (110-311)||(9923118-9923319)
chr8 (113-311)||(172464-172662)
chr8 (102-311)||(20824816-20825025)
chr8 (109-308)||(13878908-13879107)
chr8 (109-308)||(25090907-25091105)
chr8 (8-167)||(14345240-14345398)
chr8 (120-297)||(36492912-36493089)
chr8 (109-308)||(17700000-17700199)
chr8 (118-241)||(32267141-32267264)
chr8 (229-328)||(38046858-38046957)
chr8 (144-258)||(12332418-12332532)
chr8 (118-189)||(24794385-24794456)
chr8 (109-258)||(43271007-43271155)
chr8 (109-200)||(37434380-37434471)
chr8 (117-189)||(11393777-11393849)
chr8 (117-189)||(43249234-43249305)
chr8 (116-307)||(37165549-37165740)
chr8 (79-308)||(42176946-42177172)
chr8 (263-365)||(43283248-43283350)
chr8 (105-189)||(16048333-16048417)
chr8 (118-257)||(8902398-8902537)
chr8 (60-189)||(5585328-5585457)
chr8 (214-297)||(4310368-4310451)
chr8 (105-200)||(18187774-18187869)
chr8 (117-200)||(23942715-23942798)
chr8 (117-187)||(10530306-10530376)
chr8 (107-189)||(27288715-27288797)
chr8 (123-191)||(6245719-6245787)
chr8 (133-189)||(40366287-40366343)
chr8 (9-47)||(43611512-43611550)
chr8 (117-189)||(25320450-25320522)
[»] chr4 (37 HSPs)
chr4 (113-311)||(23642016-23642214)
chr4 (79-308)||(55725097-55725326)
chr4 (113-311)||(23647674-23647872)
chr4 (113-311)||(47419321-47419519)
chr4 (113-311)||(1827965-1828163)
chr4 (113-311)||(19755784-19755982)
chr4 (113-311)||(19783824-19784022)
chr4 (113-311)||(15740737-15740935)
chr4 (109-308)||(48312614-48312813)
chr4 (109-311)||(46146194-46146396)
chr4 (120-310)||(5789524-5789714)
chr4 (117-308)||(11586627-11586818)
chr4 (109-308)||(54482580-54482779)
chr4 (118-189)||(42952935-42953006)
chr4 (75-203)||(19115061-19115189)
chr4 (117-297)||(7099013-7099193)
chr4 (118-190)||(43516178-43516250)
chr4 (117-203)||(26694553-26694639)
chr4 (127-189)||(51072132-51072194)
chr4 (109-230)||(19733402-19733523)
chr4 (76-303)||(8935599-8935826)
chr4 (214-297)||(19162703-19162786)
chr4 (264-311)||(19735311-19735358)
chr4 (59-245)||(7662679-7662865)
chr4 (107-165)||(25136067-25136125)
chr4 (74-191)||(23872862-23872979)
chr4 (214-307)||(36183058-36183151)
chr4 (144-276)||(38296258-38296390)
chr4 (263-303)||(23657822-23657862)
chr4 (153-188)||(13841794-13841829)
chr4 (214-297)||(40688597-40688680)
chr4 (103-200)||(5633850-5633947)
chr4 (124-189)||(48805617-48805682)
chr4 (74-191)||(55299249-55299366)
chr4 (106-162)||(19162595-19162651)
chr4 (107-183)||(29122839-29122914)
chr4 (225-277)||(54685161-54685213)
[»] chr3 (39 HSPs)
chr3 (113-311)||(2364794-2364992)
chr3 (113-311)||(34332240-34332438)
chr3 (109-324)||(962584-962799)
chr3 (113-311)||(10322996-10323194)
chr3 (113-311)||(19919654-19919852)
chr3 (109-308)||(19891197-19891396)
chr3 (109-308)||(48569460-48569659)
chr3 (111-311)||(3141368-3141568)
chr3 (113-311)||(16179464-16179662)
chr3 (109-305)||(12341676-12341872)
chr3 (127-297)||(52250564-52250733)
chr3 (105-314)||(20531470-20531677)
chr3 (120-276)||(48930278-48930434)
chr3 (117-189)||(21739952-21740024)
chr3 (118-189)||(14863895-14863966)
chr3 (117-189)||(10868242-10868314)
chr3 (117-189)||(15481187-15481259)
chr3 (103-278)||(31675481-31675656)
chr3 (152-278)||(6825372-6825498)
chr3 (117-297)||(25024273-25024453)
chr3 (103-191)||(34830030-34830118)
chr3 (117-189)||(36709549-36709621)
chr3 (214-297)||(8130482-8130565)
chr3 (103-278)||(31920766-31920941)
chr3 (118-276)||(40513154-40513312)
chr3 (79-189)||(45684815-45684925)
chr3 (60-189)||(22734095-22734224)
chr3 (133-258)||(44888474-44888599)
chr3 (107-183)||(23604008-23604084)
chr3 (104-191)||(30166760-30166847)
chr3 (109-191)||(3271119-3271201)
chr3 (117-189)||(1231653-1231725)
chr3 (133-189)||(31548017-31548073)
chr3 (118-189)||(46908100-46908171)
chr3 (144-258)||(17077754-17077868)
chr3 (116-189)||(55367249-55367321)
chr3 (125-189)||(35273726-35273790)
chr3 (107-163)||(42458703-42458758)
chr3 (117-189)||(42674868-42674940)
[»] chr5 (38 HSPs)
chr5 (109-324)||(33170162-33170377)
chr5 (113-311)||(42514237-42514435)
chr5 (113-311)||(27116598-27116796)
chr5 (113-311)||(30731739-30731937)
chr5 (110-311)||(28535098-28535298)
chr5 (113-311)||(42928648-42928846)
chr5 (110-311)||(35983213-35983414)
chr5 (118-311)||(23238900-23239093)
chr5 (102-311)||(8299596-8299805)
chr5 (109-289)||(10780740-10780920)
chr5 (144-311)||(31642028-31642195)
chr5 (109-303)||(27796009-27796203)
chr5 (120-297)||(41590627-41590804)
chr5 (109-258)||(27165386-27165535)
chr5 (65-325)||(22094627-22094887)
chr5 (102-258)||(25856853-25857009)
chr5 (120-297)||(4297741-4297918)
chr5 (79-189)||(38358106-38358216)
chr5 (117-203)||(35122135-35122221)
chr5 (118-295)||(380434-380611)
chr5 (149-278)||(476763-476892)
chr5 (75-200)||(30509434-30509559)
chr5 (75-200)||(30549774-30549899)
chr5 (263-311)||(27165525-27165573)
chr5 (73-191)||(10486304-10486423)
chr5 (214-297)||(36256309-36256392)
chr5 (233-311)||(12825716-12825794)
chr5 (104-189)||(26262292-26262377)
chr5 (73-161)||(26261702-26261790)
chr5 (104-191)||(34481585-34481672)
chr5 (217-303)||(15862206-15862292)
chr5 (107-169)||(41925734-41925796)
chr5 (217-303)||(42039234-42039320)
chr5 (74-203)||(10460794-10460922)
chr5 (109-189)||(26263407-26263487)
chr5 (112-185)||(38184033-38184106)
chr5 (112-185)||(38214251-38214324)
chr5 (263-311)||(25856999-25857047)
[»] chr1 (21 HSPs)
chr1 (113-311)||(6051120-6051318)
chr1 (113-258)||(35541604-35541749)
chr1 (117-311)||(47622506-47622700)
chr1 (117-189)||(20796296-20796368)
chr1 (117-189)||(49264393-49264465)
chr1 (117-189)||(39430916-39430988)
chr1 (103-191)||(45795912-45796000)
chr1 (74-245)||(32352696-32352867)
chr1 (133-278)||(22191227-22191372)
chr1 (126-191)||(45270878-45270943)
chr1 (123-276)||(13867268-13867421)
chr1 (103-278)||(3544516-3544691)
chr1 (103-189)||(1248001-1248087)
chr1 (127-257)||(33142652-33142782)
chr1 (144-189)||(15174746-15174791)
chr1 (117-189)||(13112717-13112789)
chr1 (153-189)||(26131910-26131946)
chr1 (73-203)||(25504379-25504509)
chr1 (144-189)||(3074384-3074429)
chr1 (144-189)||(21405476-21405521)
chr1 (144-189)||(44692059-44692104)
[»] chr2 (27 HSPs)
chr2 (109-307)||(14440265-14440463)
chr2 (117-311)||(28253237-28253431)
chr2 (130-365)||(37445556-37445792)
chr2 (79-258)||(12646091-12646270)
chr2 (109-308)||(33515628-33515827)
chr2 (144-297)||(43310790-43310943)
chr2 (148-297)||(26146746-26146895)
chr2 (117-189)||(11233919-11233991)
chr2 (103-189)||(33583842-33583928)
chr2 (117-189)||(9668435-9668507)
chr2 (79-200)||(35488465-35488586)
chr2 (103-191)||(11196988-11197076)
chr2 (79-189)||(28399941-28400051)
chr2 (214-297)||(13416202-13416285)
chr2 (104-227)||(13550718-13550841)
chr2 (104-227)||(13551171-13551294)
chr2 (125-303)||(20004483-20004662)
chr2 (64-191)||(45422157-45422284)
chr2 (130-258)||(37437559-37437688)
chr2 (74-203)||(15018302-15018431)
chr2 (146-191)||(15127057-15127102)
chr2 (144-204)||(10689178-10689238)
chr2 (139-191)||(42051722-42051774)
chr2 (119-191)||(43722474-43722546)
chr2 (263-325)||(15018180-15018242)
chr2 (151-197)||(30504774-30504820)
chr2 (120-189)||(36804758-36804827)
[»] chr6 (36 HSPs)
chr6 (113-311)||(2554123-2554321)
chr6 (109-311)||(17605755-17605957)
chr6 (117-308)||(14372420-14372611)
chr6 (82-308)||(10576644-10576870)
chr6 (109-311)||(13938236-13938437)
chr6 (113-257)||(24766839-24766983)
chr6 (79-310)||(18681965-18682196)
chr6 (109-258)||(21629543-21629692)
chr6 (102-305)||(17577130-17577335)
chr6 (241-314)||(10922067-10922140)
chr6 (111-308)||(20882456-20882653)
chr6 (117-189)||(13086178-13086250)
chr6 (79-258)||(15956383-15956561)
chr6 (103-252)||(14843552-14843701)
chr6 (107-183)||(17228636-17228712)
chr6 (278-365)||(5041980-5042066)
chr6 (144-191)||(34434897-34434944)
chr6 (74-227)||(15674430-15674583)
chr6 (116-200)||(1104375-1104459)
chr6 (117-189)||(21549487-21549559)
chr6 (73-303)||(502917-503147)
chr6 (166-275)||(18588902-18589011)
chr6 (133-278)||(29056069-29056214)
chr6 (263-303)||(5085601-5085641)
chr6 (225-297)||(15602855-15602927)
chr6 (118-310)||(32186201-32186393)
chr6 (74-181)||(15987896-15988003)
chr6 (217-307)||(26514245-26514335)
chr6 (166-271)||(7956149-7956254)
chr6 (263-324)||(24767004-24767065)
chr6 (74-191)||(26205978-26206095)
chr6 (126-203)||(33805405-33805482)
chr6 (75-163)||(7217718-7217806)
chr6 (263-303)||(8264748-8264788)
chr6 (157-189)||(14552041-14552073)
chr6 (157-189)||(19616348-19616380)
[»] scaffold0472 (1 HSPs)
scaffold0472 (118-311)||(3769-3962)
[»] scaffold0131 (1 HSPs)
scaffold0131 (60-245)||(3928-4113)
[»] scaffold0002 (2 HSPs)
scaffold0002 (60-245)||(327507-327692)
scaffold0002 (60-245)||(312053-312238)
[»] scaffold0016 (1 HSPs)
scaffold0016 (147-258)||(28344-28455)
[»] scaffold0043 (1 HSPs)
scaffold0043 (103-252)||(34024-34173)
[»] scaffold0029 (1 HSPs)
scaffold0029 (60-245)||(134226-134411)
[»] scaffold0309 (1 HSPs)
scaffold0309 (118-197)||(715-794)
[»] scaffold0418 (1 HSPs)
scaffold0418 (59-245)||(8187-8373)
[»] scaffold0308 (1 HSPs)
scaffold0308 (117-203)||(17770-17856)
[»] scaffold0048 (1 HSPs)
scaffold0048 (126-191)||(63737-63802)
[»] scaffold0036 (1 HSPs)
scaffold0036 (102-189)||(2993-3080)
[»] scaffold0250 (1 HSPs)
scaffold0250 (127-189)||(12464-12526)
[»] scaffold0112 (1 HSPs)
scaffold0112 (117-187)||(15090-15160)
[»] scaffold0026 (1 HSPs)
scaffold0026 (217-302)||(67606-67691)


Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 8 - 373
Target Start/End: Original strand, 39930916 - 39931282
Alignment:
Q  8 catcaggtataatctcttccataaaatatttattgaataannnnnnnnggaaggggtgtgagggacataggaaaatttcttggataggatggtcttctgt 107  Q
    ||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39930916 catcatgtataatctcttccataaaatatttattgaataattttttttggaaggggtgtgagggacataggaaaatttcttggataggatggtcttctgt 39931015  T
Q  108 ttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggt 207  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39931016 ttgtttgagaaaggagtatggagggttgggggttaggaggttgagggagcttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggt 39931115  T
Q  208 gatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  39931116 gatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggttggaggatgggggccggagttgttcttgttggtggtgggagatag 39931215  T
Q  308 tgagaatccgggatggggttgaaggta-ggagtgatgggtggtttgcgtcgtgtgtgtctttttggt 373  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  39931216 tgagaattcgggatggggttgaaggtagggagtgatgggtggtttgtgtcgtgtgtgtctttttggt 39931282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 108 - 353
Target Start/End: Complemental strand, 36364236 - 36363991
Alignment:
Q  108 ttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggt 207  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||    
T  36364236 ttgtttgagaaaggagtatggtgggttgggggttaggagattgagggagtttaatattgctttgttgagtaaatggtgttggcgtttgttagtggagggt 36364137  T
Q  208 gatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 307  Q
     ||| |||| || ||||||||||||||||||| || ||||||||||||     | ||||||||| ||||||||||||||||| ||| ||| |||||||||    
T  36364136 aatggtttggggcgtagggtgttggtggctagttaaggtgtggaggataaatagttggaggatgagggccgaagttgttcttcttgatggagggagatag 36364037  T
Q  308 tgagaatccgggatggggttgaaggtaggagtgatgggtggtttgc 353  Q
    ||||||||||||||||||| | ||||||  ||||||||||||||||    
T  36364036 tgagaatccgggatggggtaggaggtagtggtgatgggtggtttgc 36363991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 4937553 - 4937751
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  4937553 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 4937652  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  4937653 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 4937751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 110 - 311
Target Start/End: Complemental strand, 17721353 - 17721152
Alignment:
Q  110 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 209  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| | ||| |||| ||||||||||||||||| |||||| |||||   ||    
T  17721353 gtttgaggaaggagtatggagggttgggggttacgaggttgagagagtttaatttagctttgttgggtaaatggtgttggcggttgttattggagaagga 17721254  T
Q  210 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 309  Q
     | ||||||| | | |||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||    
T  17721253 agctttgtggagaaaggtgttggtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtg 17721154  T
Q  310 ag 311  Q
    ||    
T  17721153 ag 17721152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 234863 - 235061
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| |||||||||||||||||||| |||| ||||||| | ||||||||||||||| |||| ||||||||||||||| | |||||| ||||| | || |     
T  234863 tgaggaaggagtatggagggttgggagttacgaggttgcgagagtttaatattgctttgttgggtaaatggtgttggtggttgttattggagagagaagc 234962  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  234963 tttgtggcgaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 235061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 118 - 311
Target Start/End: Original strand, 11276678 - 11276871
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| || | ||||||||||||||||| |||||| ||||| | || | |||||    
T  11276678 aaggagtatggagggttgggggttacgaggttgagggagtttaacattgctttggtgggtaaatggtgttggcggttgttattggagagggaagctttgt 11276777  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    || | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||| ||| |||||||| |  |||||| |||||||||||||    
T  11276778 ggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatggggcccggagttgttcgtcgtggtggagggagatagtgag 11276871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 118 - 311
Target Start/End: Complemental strand, 29968684 - 29968491
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||| | || | |||||    
T  29968684 aaggagtatggagggttgggggttacgagattgagggagtttaatattgctttgttgggtaaatggtgttggcggttgttattggagagggaagctttgt 29968585  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    || | | |||||| |||||||||||||| |||| ||||||  |  ||||||||| |||||| |||||||| |  |||||| |||||||||||||    
T  29968584 ggagaaaggtgttagtggctaggtatggcgtggcggatggaggtttggaggatgcgggccggagttgttcgtcgtggtggagggagatagtgag 29968491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 125 - 308
Target Start/End: Complemental strand, 31423305 - 31423122
Alignment:
Q  125 atggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtag 224  Q
    |||||||| |||| |||| ||||||||| |||||||| | |||| |||| || |||||||||||||| |||||||| ||  | |||| ||||||| ||||    
T  31423305 atggagggatgggtgttaggaggttgagagagtttaacagtgctttgttggggaaatggtgttggcggttgttagttgatagggatggtttgtggcgtag 31423206  T
Q  225 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    |||||||||||||||| ||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||| | ||||||||||    
T  31423205 ggtgttggtggctaggcatggtgtggcggatggtggtttggaggatgggggccggagttgttcttcgtggttgagggagatagt 31423122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 9978664 - 9978769
Alignment:
Q  57 gaaggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggag 156  Q
    |||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||| | |||||||||||| |||||||| ||||||||||||||||||    
T  9978664 gaagggttgtgagggacataggaaaattacttggatatcatggtcttctgtttgtttaaaaaaggagtatggtgggttgggcgttatgaggttgagggag 9978763  T
Q  157 tttaat 162  Q
    ||||||    
T  9978764 tttaat 9978769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 47877666 - 47877500
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 243  Q
    ||||||||| ||||||||||||||| |||| | ||||||||||||||| |||||| ||||| | || | ||||||| |   |||||||||||||||||||    
T  47877666 gaggttgagagagtttaatattgctttgttggataaatggtgttggcggttgttattggagagggaagctttgtggcgacaggtgttggtggctaggtat 47877567  T
Q  244 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| ||||||  |  |||||||| ||||||| ||||||||||  |||||| |||||||||||||    
T  47877566 ggtgtggcggatggaggtttggaggat-ggggccggagttgttcttcgtggtggagggagatagtgag 47877500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 13553613 - 13553685
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||| ||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||    
T  13553613 aaaggagtctggggggttgggggttaggaggttgagggagtttaattttgctttgttagataaatggtgttgg 13553685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 37255408 - 37255278
Alignment:
Q  178 aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 277  Q
    ||||| |||||||| |||||||| ||  | |||| |||| || |||||||||||||||||||||||||||||| ||||||  |  ||||||||||||||     
T  37255408 aaatgatgttggcggttgttagttgatagggatggtttggggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggct 37255309  T
Q  278 gaagttgttcttgttggtggtgggagatagt 308  Q
    | |||||||| |  || ||| ||||||||||    
T  37255308 ggagttgttcatcgtgatggagggagatagt 37255278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 297
Target Start/End: Original strand, 25018774 - 25018927
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 243  Q
    ||||||||||||||||||| ||||  ||||| | ||||||||||||||||| || ||| || |   |   || |||| ||||||||||||||| || |||    
T  25018774 gaggttgagggagtttaatgttgcgttgttaagaaaatggtgttggcgtttattggtgaagaggagtagcttatggtatagggtgttggtggcaagatat 25018873  T
Q  244 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    |||| ||||| |||| || |||||| |||||| |||||| |||||| |||||||    
T  25018874 ggtgaggaggctgggaggttggaggttgggggtcgaagtggttcttcttggtgg 25018927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 18768157 - 18768047
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||| |||||||||| |||  |||| | ||||  | |||||||| |||||| |||||||||| ||| |||| |||||||||||||||| |  ||||||    
T  18768157 aaaattacttggataggttgggattctttgtgttctaaaaaggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggta 18768058  T
Q  179 aatggtgttgg 189  Q
    |||||||||||    
T  18768057 aatggtgttgg 18768047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 277
Target Start/End: Original strand, 6335776 - 6335993
Alignment:
Q  60 ggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagttt 159  Q
    |||| |||||| ||||||||||||||||||| |||| |||   ||||||||||||| ||||||||| || ||||| || |||| |  |||| |||||||     
T  6335776 ggggagtgaggaacataggaaaatttcttgggtaggttggaggtctgtttgtttgaaaaaggagtacggggggttaggagttaggcagttgcgggagttc 6335875  T
Q  160 aatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggc 259  Q
    |||   ||  |||| ||||||||||||||  | || ||||| ||  | |  |  || |||| | |||||||||| |||||||||||||||   ||||||     
T  6335876 aatgaggcattgttgggtaaatggtgttgaagattattagtagatagaggagggttatggtatcgggtgttggttgctaggtatggtgtgcgcgatggga 6335975  T
Q  260 ggctggaggatgggggcc 277  Q
    || |||||||||||||||    
T  6335976 ggttggaggatgggggcc 6335993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 278
Target Start/End: Complemental strand, 17056224 - 17056079
Alignment:
Q  133 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 232  Q
    |||||||| | |||| |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||    
T  17056224 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 17056125  T
Q  233 tggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    ||||  | ||||||| |||||||||| || ||| || |||||||||    
T  17056124 tggcgcgttatggtgaggaggatgggaggttggtggttgggggccg 17056079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 32815738 - 32815816
Alignment:
Q  111 tttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||| ||||||||| ||| |||||||||||||   || |||||||||||||||||||||| ||||  ||||||||||||    
T  32815738 tttgggaaaggagtttggtgggttgggggttaaccggatgagggagtttaatattgctcttttagaaaaatggtgttgg 32815816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 34457590 - 34457659
Alignment:
Q  120 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||| ||||||| |||||||||| ||| |||| |||||||||||||||| |  |||||||||||||||||    
T  34457590 ggagcatggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttgg 34457659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 9895617 - 9895537
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||| | ||||||||||||||||||| ||| | || ||| ||||| |||||||||| | || |||||||||||||||||    
T  9895617 tgtttgcgtaaggagtatggagggttggcggtgaggaagttaagggaatttaatattgatttgctaggtaaatggtgttgg 9895537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 289
Target Start/End: Original strand, 17504041 - 17504160
Alignment:
Q  170 tgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggagga 269  Q
    |||||||||| |||||||||| | ||||||| ||  | |||| | | |||| | | ||||||||||| || || |||| |||||||||| || |||||||    
T  17504041 tgttaggtaagtggtgttggcatatgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggagga 17504140  T
Q  270 tgggggccgaagttgttctt 289  Q
    ||||||||| ||| ||||||    
T  17504141 tgggggccggagtggttctt 17504160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 17549173 - 17549054
Alignment:
Q  170 tgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggagga 269  Q
    |||||||||| |||||||||| | ||||||| ||  | |||| | | |||| | | ||||||||||| || || |||| |||||||||| || |||||||    
T  17549173 tgttaggtaagtggtgttggcatatgttagttgatagagatggtctttggtatcgagtgttggtggcgagatacggtgaggaggatgggaggttggagga 17549074  T
Q  270 tgggggccgaagttgttctt 289  Q
    ||||||||| ||| ||||||    
T  17549073 tgggggccggagtggttctt 17549054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 289
Target Start/End: Original strand, 19544832 - 19545003
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    ||||||||||||||||| ||||| | |  ||||||||||||||||| |||  | ||||| ||||||||||||||  |||| |||||  | ||||  || |    
T  19544832 aaggagtatggagggttaggggtcaggcagttgagggagtttaatagtgccttattaggcaaatggtgttggcggatgttggtggatagagatgggtttt 19544931  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttctt 289  Q
    ||| ||||||||||| | |  | ||||||| |||||  | | || |||||| ||||||||| ||| ||||||    
T  19544932 ggtatagggtgttggcgacacgatatggtgaggaggcagagaggttggaggttgggggccggagtggttctt 19545003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 278
Target Start/End: Original strand, 27218537 - 27218712
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 202  Q
    ||||||||||| | |||||||| ||||||| ||||||| | |  |||| || | |||||| | ||| |||||||||||||||||||||| |||||  | |    
T  27218537 tctgtttgtttaaaaaaggagtttggagggctgggggtgaggcagttgcggaaatttaatttagctttgttaggtaaatggtgttggcggttgttgatag 27218636  T
Q  203 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    |  | | ||  || |||| ||||||||||||||| || ||||||| |||||  ||| || ||| || |||||||||    
T  27218637 atagaggtggattttggtatagggtgttggtggcgagatatggtgaggaggcagggaggttggcggttgggggccg 27218712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 297
Target Start/End: Original strand, 45164977 - 45165168
Alignment:
Q  106 gtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagg 205  Q
    |||||| |||||||||||||||| || || || |||| | |||||||||||||||||   ||  ||||||| || ||||||||| | ||  | || ||      
T  45164977 gtttgtatgagaaaggagtatggtggtttaggagttaggcggttgagggagtttaatgaggcgttgttagggaagtggtgttggagattacttgttgatc 45165076  T
Q  206 gtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    |||  |  ||||||| | |||||||||| ||||| ||||||||   ||||||| || |||||||||| ||||| ||| |||||| |||||||    
T  45165077 gtggagggttgtggtatggggtgttggttgctagatatggtgttagggatgggaggttggaggatggaggccggagtggttctttttggtgg 45165168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 41805215 - 41805328
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 243  Q
    ||||||||||||||||||| ||  | ||||||| ||||||||||||||||| || |||||| |   |  ||| |||| ||||||||||||||| || |||    
T  41805215 gaggttgagggagtttaatgttcgt-tgttaggaaaatggtgttggcgtttattggtggagaggagtagtttttggtatagggtgttggtggcgagatat 41805313  T
Q  244 ggtgtggaggatggg 258  Q
    |||| ||||| ||||    
T  41805314 ggtgaggaggttggg 41805328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 11341500 - 11341435
Alignment:
Q  125 atggagggttgggggttatgaggttgagggagtttaatatt-gctctgttaggtaaatggtgttgg 189  Q
    ||||||| |||||||||| | ||||||||||||||||| || ||| ||||||| ||||||||||||    
T  11341500 atggaggtttgggggttacgcggttgagggagtttaattttagctatgttaggaaaatggtgttgg 11341435  T

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Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 23887795 - 23887722
Alignment:
Q  116 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||| |||| ||||||||||||||| |    |||||||||||||||||| ||| ||||||| ||||||||||||    
T  23887795 gaaatgagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttgg 23887722  T

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Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 23898971 - 23898898
Alignment:
Q  116 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||| |||| ||||||||||||||| |    |||||||||||||||||| ||| ||||||| ||||||||||||    
T  23898971 gaaatgagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttgg 23898898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 19735229 - 19735157
Alignment:
Q  118 aaggagtatggagggttgggggtt-atgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| |||||||||| ||||| | ||| |||||| |||||||| ||||  ||||||||||||||||||||    
T  19735229 aaggagtctggagggttgagggtttacgagattgaggaagtttaattttgcattgttaggtaaatggtgttgg 19735157  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 22819162 - 22819218
Alignment:
Q  133 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| | ||||||||||||||||||| || |||||||||| || |||||||||    
T  22819162 ttgggggtgaggaggttgagggagtttaatgtttctctgttaggcaagtggtgttgg 22819218  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 587606 - 587530
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 183  Q
    |||| ||||| |||||| |||| |||||||| ||||  || ||| |||||||||||||| || | ||||||||||||    
T  587606 tttgcttgagcaaggagaatggggggttgggtgttaaaagattgcgggagtttaatatttctttattaggtaaatgg 587530  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 5327512 - 5327388
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||| |||||||||| |||  | |||| ||||  | ||||||| | || |||||||| |||| || ||||| |||||||||| ||||| |  |||| |    
T  5327512 aaaattacttggataggttggaatactgtgtgttctaaaaaggagaaaggggggttgggagttaggaagttgaaggagtttaatcttgctttactaggga 5327413  T
Q  179 aatggtgttggcgtttgttagtgga 203  Q
    ||||||||||| |  ||||||||||    
T  5327412 aatggtgttggaggatgttagtgga 5327388  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 11341407 - 11341327
Alignment:
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    |||| |||||||||||  ||||||||||||| |||||  ||| || ||||||  |||||||| |||||||| | |||||||    
T  11341407 tggtatagggtgttggctgctaggtatggtgaggaggcagggaggttggaggtcgggggccggagttgttccttttggtgg 11341327  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 15653166 - 15653210
Alignment:
Q  147 gttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    ||||| ||| ||||||| |||| ||||||||||||||||||||||    
T  15653166 gttgaaggaatttaatagtgctttgttaggtaaatggtgttggcg 15653210  T

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Target: scaffold1350 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 79 - 314
Target Start/End: Complemental strand, 293 - 58
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||||||||||| || |||  |||| | |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| ||||||| |    
T  293 aaaatttcttggattggttggaattctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttaggga 194  T
Q  179 aatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    ||||||||||| | |||||||| ||  | ||||  |||||| ||| ||||||||||| |||||||||||||||||||||  |  ||||||||||||||||    
T  193 aatggtgttggaggttgttagtagatagagatggattgtggcgtaaggtgttggtggttaggtatggtgtggaggatggtggtttggaggatgggggccg 94  T
Q  279 aagttgttcttgttggtggtgggagatagtgagaat 314  Q
    |||||| |||| ||||||| |||||||||| |||||    
T  93 aagttgctcttcttggtggagggagatagtcagaat 58  T

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Target: scaffold0034 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 105268 - 105466
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  105268 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 105367  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  105368 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 105466  T

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Target: chr8 (Bit Score: 103; Significance: 4e-51; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 7925101 - 7924903
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  7925101 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 7925002  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  7925001 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 7924903  T

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Target: chr8; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 8300518 - 8300320
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  8300518 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 8300419  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  8300418 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 8300320  T

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Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 41664793 - 41664991
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | || |     
T  41664793 tgaggaaggagtatggagggttgggggttacgaggttgagagagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggaggc 41664892  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  ||||||  ||||||||||||    
T  41664893 tttgtggaggaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggatggagatagtgag 41664991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 110 - 311
Target Start/End: Complemental strand, 9923319 - 9923118
Alignment:
Q  110 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 209  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   ||    
T  9923319 gtttgaggaaggagtatggagggttgggggttacgaggttgagagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaagga 9923220  T
Q  210 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 309  Q
     | ||||||| | | |||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||    
T  9923219 agctttgtggagaaaggtgttggtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtg 9923120  T
Q  310 ag 311  Q
    ||    
T  9923119 ag 9923118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 172464 - 172662
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||| ||||||||||| ||| | |||||| ||||| | ||||     
T  172464 tgaggaaggagtatggagggttggggtttaagaggttgagggagtttaacattgctttgttgggtaaatggtgctggaggttgttattggagagggatgc 172563  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
     |||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  172564 gttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 311
Target Start/End: Complemental strand, 20825025 - 20824816
Alignment:
Q  102 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtg 201  Q
    |||||| || ||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || |||||||||||| |  |||||||     
T  20825025 ttctgtgtgcttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaatggtgttggaggctgttagtt 20824926  T
Q  202 gagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggg 301  Q
    ||  | |  | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| ||||||||||  |||||| |||    
T  20824925 gataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgttctttgtggtggaggg 20824826  T
Q  302 agatagtgag 311  Q
    |||| |||||    
T  20824825 agattgtgag 20824816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 13878908 - 13879107
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||| |||||||| |||  ||| |||||  ||||||| |||||| || |||| |||||||||||||| |||||||| ||  | |    
T  13878908 tgtttgaggagggagtatggggggttgggtgttcggagattgagcaagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagag 13879007  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    | |  || ||| |||||||||||||||||||||||||||||| ||||||  |  |||||||||||||||  ||||||||||  |||||| ||||||||||    
T  13879008 aggggttatggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccagagttgttcttcgtggtggagggagatagt 13879107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 308
Target Start/End: Complemental strand, 25091105 - 25090907
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||| || ||||| |||| ||| ||||| |||||||| |||||| ||||||| |||||||||| ||| |||||||| ||  | |    
T  25091105 tgtttgaggagggagtatgg-ggtttgggtgttaggagattgagagagtttaacattgctttgttagggaaatggtgttagcggttgttagttgatagag 25091007  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    | |  |||||| |||||||||||||||||| ||||||||||| ||||||  |  |||||||||||||||| || |||||||  |||||| ||||||||||    
T  25091006 aggggttgtggcgtagggtgttggtggctatgtatggtgtggcggatggtggtttggaggatgggggccggagctgttcttcgtggtggagggagatagt 25090907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 14345240 - 14345398
Alignment:
Q  8 catcaggtataatctcttccataaaatatttattgaataannnnnnnnggaaggggtgtgagggacataggaaaatttcttggataggatggtcttctgt 107  Q
    |||||| |||||||||||||||||||| |||| |||||||        ||  ||| ||||||||||||||||||||||||||||||  ||| |||||| |    
T  14345240 catcagatataatctcttccataaaatctttactgaataaatttttttggg-gggttgtgagggacataggaaaatttcttggatatcatgttcttctat 14345338  T
Q  108 ttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgc 167  Q
    |||||||||||||||||||| | | ||| |||| | |||||||||| |||||||| ||||    
T  14345339 ttgtttgagaaaggagtatgaaagtttgagggtgaggaggttgaggaagtttaatgttgc 14345398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 297
Target Start/End: Complemental strand, 36493089 - 36492912
Alignment:
Q  120 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 219  Q
    |||||||||||| ||||||||   ||||||| ||||||||||| ||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||    
T  36493089 ggagtatggaggtttgggggtgcggaggttgcgggagtttaatgttgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatgg 36492990  T
Q  220 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    | ||||||||||||||| |||||||||| |||||||||| || ||| || ||||||||| ||  |||||| |||||||    
T  36492989 tatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttgggggccggagaggttcttcttggtgg 36492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 109 - 308
Target Start/End: Complemental strand, 17700199 - 17700000
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | |||||||||||||||||| || | ||||||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |    
T  17700199 tgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggg 17700100  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
      | ||||||| ||||||||||  ||||||||||||| |||   |||||  |  |||||||||||||||| ||||| ||||   ||||| ||||||||||    
T  17700099 gaggtttgtggagtagggtgttcttggctaggtatggagtgacagatggtggtttggaggatgggggccggagttgctcttcgcggtggagggagatagt 17700000  T

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Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 32267264 - 32267141
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||| || ||| |||| ||||||||||||||||| |||||| ||||| | || | |||||    
T  32267264 aaggagtatggagggttgggggttacgagattgagagagtttaacatagctttgttgggtaaatggtgttggcggttgttattggagagggaagctttgt 32267165  T
Q  218 ggtgtagggtgttggtggctaggt 241  Q
    || | | |||||| ||||||||||    
T  32267164 ggagaaaggtgttagtggctaggt 32267141  T

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Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 229 - 328
Target Start/End: Complemental strand, 38046957 - 38046858
Alignment:
Q  229 ttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttg 328  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||  || ||| |||||||||| ||||| |||| ||| ||||    
T  38046957 ttggttgctaggtatggtgtggaggatgggaggttggaggatgggggccgaagttgttcttcgtgatggagggagatagttagaattcggggtggtgttg 38046858  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 12332532 - 12332418
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag-ggtgatgatttgtggtgtagggtgttggtggctaggta 242  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||| |||| |  | | |||| ||||||||||||||| || ||    
T  12332532 gaggttgagggagtttaatattgcgttgttaggcaaatggtgttggcgtttattagtggagaggtg-tagtctttggtatagggtgttggtggcgagata 12332434  T
Q  243 tggtgtggaggatggg 258  Q
    ||||| ||||||||||    
T  12332433 tggtgaggaggatggg 12332418  T

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Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 24794456 - 24794385
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  24794456 aaggagtctggagggttgggggttaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 24794385  T

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Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 258
Target Start/End: Complemental strand, 43271155 - 43271007
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | |||||||||||| ||||| |||| ||||||||| |||||||| ||| | ||  | || |||||||||||||| |||||||  ||    |    
T  43271155 tgtttgaggagggagtatggagg-ttgggtgttaggaggttgagagagtttaacatttccctactggggaaatggtgttggcggttgttagatgatatgg 43271057  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 258  Q
     || ||||||||||||||||||| |||||||||||||||||| |||||||    
T  43271056 gtggtttgtggtgtagggtgttgatggctaggtatggtgtggcggatggg 43271007  T

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Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 200
Target Start/End: Original strand, 37434380 - 37434471
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 200  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || ||||||||||||||  |||||||    
T  37434380 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttgggaaaatggtgttggcggctgttagt 37434471  T

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Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 11393777 - 11393849
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||||||||||||||||| | | ||||||||||||||| ||||  ||||||||||||||||||||    
T  11393777 aaaggagtctggagggttgggggttaggtgattgagggagtttaattttgcattgttaggtaaatggtgttgg 11393849  T

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Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 43249234 - 43249305
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  43249234 aaaggagtctggagggttgggg-ttaggaggttgagagagtttaattttgctttgttaggtaaatggtgttgg 43249305  T

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Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 307
Target Start/End: Original strand, 37165549 - 37165740
Alignment:
Q  116 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgattt 215  Q
    |||||||| |||| || |||||||| | | |||||| ||| |||||||||||||| ||||| || || |||||| |  ||||||||||  | |  |  ||    
T  37165549 gaaaggagaatgggggtttgggggtgaggcggttgaaggaatttaatattgctctattaggaaagtgatgttggaggatgttagtggatagaggaggctt 37165648  T
Q  216 gtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 307  Q
    ||||| ||||||  ||||||| || ||||| | ||||||||||||| |||||| ||||||||| |||  ||||  ||||||| |||||||||    
T  37165649 gtggtatagggtactggtggcgagatatggcgaggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggagatag 37165740  T

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Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 79 - 308
Target Start/End: Original strand, 42176946 - 42177172
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||||||||| | || |||  |||| | ||| |||| | ||||||||||||| || | |||| | ||||||| |||||||| ||| || |||| |  |    
T  42176946 aaaatttcttgggttggttggagttctttgtgtatgaggagggagtatggagggatgagtgttagggggttgagagagtttaacattcctttgttggaga 42177045  T
Q  179 aatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    |||| ||||| || |||||||| ||  | |||| ||||||| ||||||||||||||||||||||   |  ||  |||||  |  ||||||||| ||||||    
T  42177046 aatgatgttgacggttgttagttgatagggatggtttgtggcgtagggtgttggtggctaggta---tcaggcagatggtggtttggaggatgcgggccg 42177142  T
Q  279 aagttgttcttgttggtggtgggagatagt 308  Q
    |||||||||||  |||||| ||||||||||    
T  42177143 aagttgttcttcgtggtggagggagatagt 42177172  T

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Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 43283248 - 43283350
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtggtttgcgtcgtgtgt 362  Q
    ||||||||||  |||| |||||||||||||||||| ||||||||||||||||  |||||| |||||  | |||   |||| |||||||||| ||||||||    
T  43283248 tggaggatggaagccggagttgttcttgttggtggagggagatagtgagaatttgggatgaggttggtgttagttatgataggtggtttgcttcgtgtgt 43283347  T
Q  363 gtc 365  Q
    |||    
T  43283348 gtc 43283350  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 16048333 - 16048417
Alignment:
Q  105 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||  |||||||||||||||||||||||  || |  | ||||||||||||| || ||||| ||||||||||||||||||    
T  16048333 tgtttgtttacgaaaggagtatggagggttggggactaggcagatgagggagtttaacatggctcttttaggtaaatggtgttgg 16048417  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 8902537 - 8902398
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    |||||| | ||||| |||||||||| |||| |||| || |||||| | ||||| ||||| ||||||||||||||  ||||||| ||  | | ||  ||||    
T  8902537 aaggaggaaggaggtttgggggttaggaggatgagagaatttaatctggctctcttaggaaaatggtgttggcggatgttagttgatagagctggcttgt 8902438  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgg 257  Q
    ||| ||||||||| |||||| | ||||||| |||||||||    
T  8902437 ggtatagggtgttagtggctcgttatggtgaggaggatgg 8902398  T

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Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 189
Target Start/End: Complemental strand, 5585457 - 5585328
Alignment:
Q  60 ggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagttt 159  Q
    |||| ||||||  ||||||||||| |||||| || | |||  |  |||||||||| | |||||||||||||| |||| ||| | || ||| ||||| |||    
T  5585457 ggggagtgaggatcataggaaaatatcttggttacgttggaatattgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaattt 5585358  T
Q  160 aatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||||| |  |||||||||||||||||    
T  5585357 aatattgctttactaggtaaatggtgttgg 5585328  T

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Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 4310368 - 4310451
Alignment:
Q  214 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    ||||||| |||||||||||| ||||| |||| |||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  4310368 ttgtggtatagggtgttggttgctagatatgatgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 4310451  T

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Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 18187869 - 18187774
Alignment:
Q  105 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 200  Q
    |||||||||  |||| |||| ||||||||||||||||| |     |||||||||||| | |||| |||||||||||||||||||| | ||||||||    
T  18187869 tgtttgtttaggaaaagagtctggagggttgggggttaggcatacgagggagtttaacactgctttgttaggtaaatggtgttggagattgttagt 18187774  T

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Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 23942798 - 23942715
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 200  Q
    ||||||| ||||||| |||||||| | || ||||| |||||||||| ||||| |  ||||||||||||||||| | ||||||||    
T  23942798 aaaggagcatggaggtttgggggtcaggaagttgaaggagtttaatgttgctttactaggtaaatggtgttggaggttgttagt 23942715  T

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Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 10530376 - 10530306
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgtt 187  Q
    |||||||||||||||| || | ||||  |||||||| |||||||||||| | |||||||| ||||||||||    
T  10530376 aaaggagtatggagggatgagtgttagtaggttgagagagtttaatattaccctgttaggaaaatggtgtt 10530306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 27288797 - 27288715
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||||||||||||||||||||| ||| ||||||  ||| ||| ||| ||||||||  || | ||||| ||||||||||||    
T  27288797 tttgtttgagaaaggagtatggaggcttgagggttagaaggatgaaggaatttaatatatctttattaggaaaatggtgttgg 27288715  T

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Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 6245787 - 6245719
Alignment:
Q  123 gtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||||||||||||||| | || ||||  |||||||||||  ||| |||||||||||| |||||||||    
T  6245787 gtatggagggttgggggtgaggaagttgcaggagtttaatagcgctttgttaggtaaattgtgttggcg 6245719  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 40366343 - 40366287
Alignment:
Q  133 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||| | ||||||||||||||||| | | |||||| |||||||||||||||    
T  40366343 ttgggggttaggcggttgagggagtttaatgtggttctgtttggtaaatggtgttgg 40366287  T

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Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 43611512 - 43611550
Alignment:
Q  9 atcaggtataatctcttccataaaatatttattgaataa 47  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  43611512 atcaggtataatctcttccattaaatctttattgaataa 43611550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 25320522 - 25320450
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| |||| ||||||||||||| | |||| || ||||||||| || || |||| || ||||||||||||    
T  25320522 aaaggaggatggggggttgggggttaggcggttaagagagtttaatttttctttgttgggaaaatggtgttgg 25320450  T

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Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 23642016 - 23642214
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  23642016 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 23642115  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  23642116 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 23642214  T

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Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 308
Target Start/End: Original strand, 55725097 - 55725326
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||||||||||| || |||  |||| | |||||||| | |||||||||||||||||| |||| ||||||||| ||||||||  ||||| ||||||| |    
T  55725097 aaaatttcttggattggttggaattctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaactttgctttgttaggga 55725196  T
Q  179 aatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    ||||||||||| | |||||||| ||  | ||||  || |||| ||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||    
T  55725197 aatggtgttggaggttgttagtagatagagatggattatggtatagggtgttggtggctaggtatggtgtggaggatggtggtttggaggatgggggccg 55725296  T
Q  279 aagttgttcttgttggtggtgggagatagt 308  Q
     |||||||||| ||||||| ||||||||||    
T  55725297 gagttgttcttcttggtggagggagatagt 55725326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 23647674 - 23647872
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| | ||||||||||||| | |||||| ||||| | ||||     
T  23647674 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttggataaatggtgttggaggttgttattggagagggatgc 23647773  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  23647774 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 23647872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 47419519 - 47419321
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||| ||||||||||||||||  |||| ||||||||||||| |||||| |||||||||||||||||||| | |||||  ||||| | ||||     
T  47419519 tgaggaaggagtttggagggttgggggttcagaggctgagggagtttaacattgctttgttaggtaaatggtgttggaggttgttgttggagagggatgc 47419420  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  47419419 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 47419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 1827965 - 1828163
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||  ||||||||| ||||||||| |||||||| ||| || |||| | ||||||||||||||| |||||| |||||   ||||     
T  1827965 tgaggaaggagtatggaggactgggggttacgaggttgagagagtttaacatttctttgttggataaatggtgttggcggttgttattggagaaggatgt 1828064  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  ||| |||||||||||| |||||||||| ||||||| |||||||||||||    
T  1828065 tttgtggaggaaggtgttagtggctaggtatggtgtggaggatggaggtttggcggatgggggccggagttgttcttcttggtggcgggagatagtgag 1828163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 19755982 - 19755784
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| |||||||||||||||||||| ||||  |||||||| |||||||| |||||| |||| | ||||||||||||||| |||||| ||||| | || |     
T  19755982 tgaggaaggagtatggagggttgggtgttacaaggttgagagagtttaacattgctttgttggataaatggtgttggcggttgttattggagagggaagc 19755883  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  19755882 tttgtggaggaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 19755784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 19783824 - 19784022
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| |||||||||||||||||||| ||||  |||||||| |||||||| |||||| |||| | ||||||||||||||| |||||| ||||| | || |     
T  19783824 tgaggaaggagtatggagggttgggtgttacaaggttgagagagtttaacattgctttgttggataaatggtgttggcggttgttattggagagggaagc 19783923  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  19783924 tttgtggaggaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagatagtgag 19784022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 15740935 - 15740737
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||| | ||||||||  |||||||| |||||| |||| |||||||||||||  || |||||| |||||   || |     
T  15740935 tgaggaaggagtatggagggttgggggtaacgaggttgacagagtttaacattgctttgttgggtaaatggtgtttacggttgttattggagaaggaagt 15740836  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  ||| |||||||||||| ||||||||||  |||||| |||||||||||||    
T  15740835 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggaggtttggcggatgggggccggagttgttcttcatggtggcgggagatagtgag 15740737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 109 - 308
Target Start/End: Complemental strand, 48312813 - 48312614
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||| |||||||| |||  ||| ||||| |||||||| |||||| || |||| |||||||||| ||| |||||||| ||  | |    
T  48312813 tgtttgaggagggagtatggggggttgggtgttcggagattgagagagtttaacattgctttgctagggaaatggtgttagcggttgttagttgatagag 48312714  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    | |  |||||| |||||||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||||||    
T  48312713 aggggttgtggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccggagttgttcttcgtggtggagggagatagt 48312614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 311
Target Start/End: Complemental strand, 46146396 - 46146194
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| |||||||| |||||| |||| |||| ||| ||||||| |||||| |||||| ||||||| |||||||||||  | |||||||| ||| | |    
T  46146396 tgtttgaggaaggagtacggagggatgggtgttaggagattgagggggtttaacattgctttgttaggaaaatggtgttgaaggttgttagtagagagag 46146297  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    |||  |||||| ||||||||||||||||||| |||||||  | ||||||  |  ||||| |||||||||| |||||||| | ||||||| ||||||||||    
T  46146296 atgggttgtggcgtagggtgttggtggctagatatggtgcagcggatggtggtttggagaatgggggccggagttgttcatcttggtggcgggagatagt 46146197  T
Q  309 gag 311  Q
    |||    
T  46146196 gag 46146194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 120 - 310
Target Start/End: Original strand, 5789524 - 5789714
Alignment:
Q  120 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 219  Q
    |||||||| ||||||||| | || ||||||||||||||||||| |  || |||| || || ||||||||| | |||||||| ||| |||| |  ||||||    
T  5789524 ggagtatgaagggttgggagataggaggttgagggagtttaatgtcactttgttgggaaagtggtgttggaggttgttagtagagagtgaagggttgtgg 5789623  T
Q  220 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 310  Q
     ||| |||||| |||||||||||||||||||||| |||  |  |||||||||||||||| |||||||||| ||||||| ||||||| ||||    
T  5789624 cgtaaggtgttagtggctaggtatggtgtggagggtggaggtttggaggatgggggccggagttgttcttcttggtggcgggagattgtga 5789714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 117 - 308
Target Start/End: Original strand, 11586627 - 11586818
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 216  Q
    |||||| ||| ||||| |||  |||| |||||| || ||||||| || ||| |||||||| |||||||||||||| |||||||| ||    || |  |||    
T  11586627 aaaggaatatagagggatggatgttaggaggttaagagagtttattactgccctgttaggaaaatggtgttggcggttgttagttgataaggaagggttg 11586726  T
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    ||||||| |||||| ||||||||||||||||||| ||||||  |  ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  11586727 tggtgtaaggtgttagtggctaggtatggtgtggcggatggaggtttggagaatgggggccgaagttgttcttcttggtggagggagatagt 11586818  T

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Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 54482580 - 54482779
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||| ||| |||| |||  ||| ||||| |||||||| |||||| || |||| |||||||||||||| |||||||| ||  | |    
T  54482580 tgtttgaggagggagtatggggggctgggtgttcggagattgagcgagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagag 54482679  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    | |  || ||| ||||||||||||||||||||||||||||||  |||||  |  ||||||||||||| || ||||||||||  |||||| ||||||||||    
T  54482680 aggggttatggcgtagggtgttggtggctaggtatggtgtggcagatggtggtttggaggatgggggtcggagttgttcttcgtggtggagggagatagt 54482779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 42952935 - 42953006
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  42952935 aaggagtctggagggttgggggttaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 42953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 203
Target Start/End: Complemental strand, 19115189 - 19115061
Alignment:
Q  75 taggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtta 174  Q
    ||||||||| ||||||||||  |||  |||||||||| |   |||||||| ||||||||| |||||||    ||||| |||||||||||||||| | |||    
T  19115189 taggaaaatatcttggatagcttggagttctgtttgtctccaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttatta 19115090  T
Q  175 ggtaaatggtgttggcgtttgttagtgga 203  Q
    || |||||||||||| | |||||||||||    
T  19115089 gggaaatggtgttggaggttgttagtgga 19115061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 7099193 - 7099013
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 216  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||   ||  |||| || || | ||||||| |||||||||| ||  | || | ||||    
T  7099193 aaaggagtatggaggtttgggtgttaggcagttgagggagtttaatgaggcgttgttgggaaagttgtgttggagtttgttagttgatcgagagggtttg 7099094  T
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    |||| | |||| ||| | ||||| ||||||| |||||||| | || |||||||||||||||| ||| |||||  |||||||    
T  7099093 tggtatcgggttttgatagctagatatggtgaggaggatgagaggttggaggatgggggccggagtggttctatttggtgg 7099013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 43516178 - 43516250
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggc 190  Q
    ||||||||||||||||||||||| | || ||||  ||| ||||||| |||| |||||||||||||||||||||    
T  43516178 aaggagtatggagggttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggc 43516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 26694639 - 26694553
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 203  Q
    |||| |||||||||| |||||||| | ||| |||| |||||||||||||||| |  ||||||||||||||||| |  ||||||||||    
T  26694639 aaagaagtatggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagtgga 26694553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 51072132 - 51072194
Alignment:
Q  127 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||| |||||||| | |||| |||||||||||||| ||||||||||||| ||||||||||||    
T  51072132 ggaggtttgggggtcaggaggatgagggagtttaatgttgctctgttagggaaatggtgttgg 51072194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 19733402 - 19733523
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| |||||||| | |||| |||| |||| ||| |||||||||||||| | || | ||||||| |||||||||||| | |||||| | ||| | |    
T  19733402 tgtttgaggaaggagtacgaagggatgggtgttaggagattgagggagtttaacactgttttgttaggaaaatggtgttggaggttgttaatagagagag 19733501  T
Q  209 atgatttgtggtgtagggtgtt 230  Q
    |||  |||||| ||||||||||    
T  19733502 atgggttgtggcgtagggtgtt 19733523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 303
Target Start/End: Complemental strand, 8935826 - 8935599
Alignment:
Q  76 aggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttag 175  Q
    |||||||| |||| |||||  |||  |||||||||| |   |||||||| ||||||||| |||||||    ||||| |||||||||||||||  |  |||    
T  8935826 aggaaaatgtcttagatagattggagttctgtttgtctccaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgccttactag 8935727  T
Q  176 gtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatggggg 275  Q
    | |||||||||||| |  ||||||||||  | | || ||| |||| ||| || || || ||| | ||||| | || |  |||| || |||||||||||||    
T  8935726 ggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgctcgttatggcgaggtgtgtgggaggttggaggatggggg 8935627  T
Q  276 ccgaagttgttcttgttggtggtgggag 303  Q
    ||| |||||||||| ||||||| |||||    
T  8935626 ccggagttgttcttcttggtggcgggag 8935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 19162703 - 19162786
Alignment:
Q  214 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    ||||||| |||||||||||| ||||| ||||||||   ||| ||| || |||||||||||||||| ||| |||||| |||||||    
T  19162703 ttgtggtatagggtgttggttgctagatatggtgttagggacgggaggttggaggatgggggccggagtggttctttttggtgg 19162786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 19735311 - 19735358
Alignment:
Q  264 ggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  19735311 ggaggatgggggccggagttgttcttcttggtggcgggagatagtgag 19735358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 245
Target Start/End: Original strand, 7662679 - 7662865
Alignment:
Q  59 aggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtt 158  Q
    |||| |||||||  ||||| |||||| |||||||||| |||     ||||||||  | ||||||| ||||||| |||||||| |    ||||| ||| ||    
T  7662679 agggatgtgaggatcatagaaaaattacttggataggctggaaaattgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatt 7662778  T
Q  159 taatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 245  Q
    ||||| |||| ||||||||||||||||||||||  |||| |||||  | | || |||||||| ||| || || || |||||||||||    
T  7662779 taatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttgtggtatagtgtcttagttgctaggtatgg 7662865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 25136125 - 25136067
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatatt 165  Q
    ||||||||| ||||||| ||||||| ||||| || | ||||||||||||||||||||||    
T  25136125 tttgtttgaaaaaggagaatggaggtttgggtgtgaagaggttgagggagtttaatatt 25136067  T

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Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 23872862 - 23872979
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    ||||||||||||||||| || | |||    |||||||||| | |||||||||||| || ||||||||   ||  |||| |||||||||| | ||| ||||    
T  23872862 ataggaaaatttcttggttaagttggcaaactgtttgtttaaaaaaggagtatggcggtttgggggtacggaaattgaaggagtttaatttagctttgtt 23872961  T
Q  174 aggtaaatggtgttggcg 191  Q
    ||| ||||||||||||||    
T  23872962 aggaaaatggtgttggcg 23872979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 36183151 - 36183058
Alignment:
Q  214 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 307  Q
    ||||||| ||||||  | ||||| || ||||||| ||||||||||||| |||||| ||||||||| |||  ||||  ||||||| |||||||||    
T  36183151 ttgtggtatagggtacttgtggcaagatatggtgaggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggagatag 36183058  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 276
Target Start/End: Complemental strand, 38296390 - 38296258
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga-tttgtggtgtagggtgttggtggctaggta 242  Q
    |||||||||||||||||||   ||  | ||||| |||||||||||||| || ||||||||| | || || ||| |||| ||||||||||||||| || ||    
T  38296390 gaggttgagggagtttaatgaggcgttattagggaaatggtgttggcggttattagtggagag-gaggagtttttggtatagggtgttggtggcgagata 38296292  T
Q  243 tggtgtggaggatgggcggctggaggatgggggc 276  Q
    ||||| || | ||||| || |||||| |||||||    
T  38296291 tggtgaggtgaatgggaggttggaggttgggggc 38296258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 23657862 - 23657822
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggag 303  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  23657862 tggaggatgggggccgaagttgttcttcttggtggcgggag 23657822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 188
Target Start/End: Complemental strand, 13841829 - 13841794
Alignment:
Q  153 ggagtttaatattgctctgttaggtaaatggtgttg 188  Q
    |||||||||||||||||| |||||||||||||||||    
T  13841829 ggagtttaatattgctcttttaggtaaatggtgttg 13841794  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 40688680 - 40688597
Alignment:
Q  214 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    ||||||| | |||||||||| | ||| ||||||||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  40688680 ttgtggtatcgggtgttggttggtagatatggtgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 40688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 5633850 - 5633947
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 200  Q
    |||||||||||||||||||||  |||||| |||| ||| | |||  | || |||||||||| |||  | |||||||| ||||||||| | ||||||||    
T  5633850 tctgtttgtttgagaaaggaggttggaggtttggaggtaaggagaattagtgagtttaatagtgcattattaggtaagtggtgttggagattgttagt 5633947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 48805682 - 48805617
Alignment:
Q  124 tatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| |||||| | | |||| |||| ||||||||||||||||| |||||||| | |||||||    
T  48805682 tatggaggtttggggctgaggaggatgagagagtttaatattgctctattaggtaagttgtgttgg 48805617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 55299366 - 55299249
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    ||||||||||||||||| || | |||    |||||||||| | |||||||| ||| || ||||||||   ||  |||| |||||||||| | ||| ||||    
T  55299366 ataggaaaatttcttggttaagttggcaaactgtttgtttaaaaaaggagtgtggcggtttgggggtgcggaaattgaaggagtttaatttagctttgtt 55299267  T
Q  174 aggtaaatggtgttggcg 191  Q
    ||| ||||||||||||||    
T  55299266 aggaaaatggtgttggcg 55299249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 19162595 - 19162651
Alignment:
Q  106 gtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaat 162  Q
    |||||| |||||||||||||||| || || || |||| | |||||||||||||||||    
T  19162595 gtttgtatgagaaaggagtatggtggtttaggagttaggcggttgagggagtttaat 19162651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 29122839 - 29122914
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 183  Q
    ||||||||| ||||||| |||| ||||||||| |||  |||||| |||||||||||||| || | ||||| ||||||    
T  29122839 tttgtttgaaaaaggagaatggggggttgggg-ttaaaaggttgcgggagtttaatatttctttattagggaaatgg 29122914  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 54685213 - 54685161
Alignment:
Q  225 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggcc 277  Q
    ||||||||| |||||||||||||||   |||||| || |||||||||||||||    
T  54685213 ggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggcc 54685161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 2364992 - 2364794
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  2364992 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 2364893  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  2364892 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 2364794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 34332240 - 34332438
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | || |     
T  34332240 tgaggaaggagtatggagggttgggggttacgaggttgagagagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggaggc 34332339  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||| | ||||||||||  |||||| |||||||||||||    
T  34332340 tttgtggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggcgggagttgttcttcgtggtggagggagatagtgag 34332438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 109 - 324
Target Start/End: Original strand, 962584 - 962799
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| |||||||| |||||| |||| |||| ||| ||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||| | |    
T  962584 tgtttgaggaaggagtacggagggatgggtgttaggagtttgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagtagagagag 962683  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    |||  |||||| |||||||||| |||||||||||||||| || ||||||  |  ||||||||||||| || |||||||| | ||||||| ||||||||||    
T  962684 atgggttgtggcgtagggtgttagtggctaggtatggtggggcggatggtggtttggaggatgggggtcggagttgttcatcttggtggagggagatagt 962783  T
Q  309 gagaatccgggatggg 324  Q
    ||| ||  ||||||||    
T  962784 gaggattagggatggg 962799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 10322996 - 10323194
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||| ||||||||||||||||| |||| ||||||||||||| |||||| |||| ||||||||||||||| | |||||  ||||| | ||||     
T  10322996 tgaggaaggagtttggagggttgggggttaagaggctgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttgttggagagggatgc 10323095  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| |||| |||||  |||||| ||||||| |||||    
T  10323096 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttattcttcgtggtggagggagattgtgag 10323194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 19919654 - 19919852
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||  |||| || |||||||||||| | |||||| ||||| | ||||     
T  19919654 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgccttgttgggcaaatggtgttggaggttgttattggagagggatgc 19919753  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| |   |||||| |||||||||||||||||||||||||   |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  19919754 tttgtggagacaggtgttagtggctaggtatggtgtggaggatgacggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 19919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 308
Target Start/End: Complemental strand, 19891396 - 19891197
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||||||| |||| |||| ||||||||| ||||||||  ||||  ||||  | |||||||||||||| |||||||| ||  | |    
T  19891396 tgtttgaggagggagtatggagggatgggtgttaggaggttgagagagtttaactttgcattgttgaggaaatggtgttggcgattgttagttgataggg 19891297  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
     || ||||||| ||||||||||||||||||||||||||||||  |||||  |  |||||||||||||||||||||||||||  |||||| ||||||||||    
T  19891296 ttggtttgtggcgtagggtgttggtggctaggtatggtgtggcagatggtggtttggaggatgggggccgaagttgttcttcgtggtggagggagatagt 19891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 48569460 - 48569659
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||||||| |||| |||| ||| ||||| |||||||| |||||| || |||  |||||||||||||| |||||||| ||  | |    
T  48569460 tgtttgaggagggagtatggagggctgggtgttaggagattgagagagtttaacattgctttgctagagaaatggtgttggcggttgttagttgatagag 48569559  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    |||  |||||| |||||||||||||||||||||||||||||| ||||||  |  ||||||||||||||||||| |||||||  |||| | ||||||||||    
T  48569560 atgggttgtggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccgaagctgttcttcgtggtagagggagatagt 48569659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 111 - 311
Target Start/End: Complemental strand, 3141568 - 3141368
Alignment:
Q  111 tttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgat 210  Q
    |||||| ||||||||| ||||| |||| |||| ||| |||||||||||||| | |||| ||||||| |||||||||||| | |||||||| ||| | |||    
T  3141568 tttgaggaaggagtatagagggatgggtgttaggagattgagggagtttaacactgctttgttaggaaaatggtgttggaggttgttagtagagagagat 3141469  T
Q  211 gatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 310  Q
    |  |||||| |||||||||| |||||||||||||||| || ||||||     |||||||||||||||| | |||||| | ||||||| ||||||||||||    
T  3141468 gggttgtggcgtagggtgttagtggctaggtatggtgcggcggatggtgatttggaggatgggggccggaattgttcatcttggtggcgggagatagtga 3141369  T
Q  311 g 311  Q
    |    
T  3141368 g 3141368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 16179662 - 16179464
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| |||||||||| ||||||||| |||| ||||||||||||||||||| | ||| |||| || |||||||||||| | |||||||| ||| |||| |     
T  16179662 tgaggaaggagtatgaagggttgggagttaggaggttgagggagtttaatgtcgctttgttggggaaatggtgttggaggttgttagtagagagtgaagg 16179563  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
     |||||| ||| |||||| ||||| ||||||||||| || | |||  |  |||||||||||||||| |||||||||| ||||||| ||||||| |||||    
T  16179562 gttgtggcgtaaggtgttagtggcgaggtatggtgtagacggtggaggtttggaggatgggggccggagttgttcttcttggtggcgggagattgtgag 16179464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 109 - 305
Target Start/End: Original strand, 12341676 - 12341872
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | |||||||||||||||||| || | ||||||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |    
T  12341676 tgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggg 12341775  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagat 305  Q
      | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| ||||| ||||  |||||| |||||||    
T  12341776 gaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgctcttcgtggtggagggagat 12341872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 127 - 297
Target Start/End: Original strand, 52250564 - 52250733
Alignment:
Q  127 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtaggg 226  Q
    ||||||||||| ||   ||||||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||||| | | |  ||| |||| |||||    
T  52250564 ggagggttgggtgtgcggaggttgagggagtttaatgttgcgttgttagggaaatggtgttggcgtttgttggtggagag-ggtagtttatggtataggg 52250662  T
Q  227 tgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    |||||||||| || ||||||| |||||||||| || |||||| ||||||||| ||| |||||| |||||||    
T  52250663 tgttggtggcgagatatggtgaggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 52250733  T

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Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 105 - 314
Target Start/End: Original strand, 20531470 - 20531677
Alignment:
Q  105 tgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag 204  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||  ||||||| |  ||  | || || ||||||||||||||||||||| | ||     
T  20531470 tgtttgtatgaggaaggagtatggtgggttgggggttaggaggttgag--agtttaacaccgcattattggggaaatggtgttggcgtttgttaattgat 20531567  T
Q  205 ggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggaga 304  Q
     | || | ||||||| ||| ||||||||| |||||||||| || |||||||||  |  |||| ||||||||  | |||| ||||| ||||||| ||||||    
T  20531568 agggaaggtttgtggcgtaaggtgttggtagctaggtatgctgcggaggatggaggtttggaagatgggggttggagttattcttcttggtggagggaga 20531667  T
Q  305 tagtgagaat 314  Q
    ||||||||||    
T  20531668 tagtgagaat 20531677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 120 - 276
Target Start/End: Complemental strand, 48930434 - 48930278
Alignment:
Q  120 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 219  Q
    ||||| |||||| ||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||  |||| || ||| |  ||  ||| |||    
T  48930434 ggagtttggaggtttgggggtgcggaggttgagggagtttaatattgcattgttaggtaaatggtgttggcggctgttggtagagaggaatagtttatgg 48930335  T
Q  220 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggc 276  Q
    | |||||| |||||||| || ||||||| |||||||||| || |||||| |||||||    
T  48930334 tatagggttttggtggcgagatatggtgaggaggatgggaggttggaggttgggggc 48930278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 21739952 - 21740024
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  21739952 aaaggagtctggagggttgggggtaaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 21740024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 14863895 - 14863966
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||  ||||||||||||||||||||    
T  14863895 aaggagtctggagggttgggggttaggagattgagggagtttaattttgcattgttaggtaaatggtgttgg 14863966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 10868314 - 10868242
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||||||||| ||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  10868314 aaaggagtctggagggttaggggtaaggagattgagggagtttaattttgctttgttaggtaaatggtgttgg 10868242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 15481187 - 15481259
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||| |||||||||| || ||||| |||||||||||||||| | ||||||||||||||||||    
T  15481187 aaaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttattaggtaaatggtgttgg 15481259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 278
Target Start/End: Complemental strand, 31675656 - 31675481
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 202  Q
    |||||||||||  ||||||||||||||||||| ||||| |    |||||||||||||||   |||| ||||||||||||||||||||||  |||| ||||    
T  31675656 tctgtttgtttacgaaaggagtatggagggttaggggtgagacagttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtgg 31675557  T
Q  203 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    |  | | || ||| |||| ||||||| ||||||  || ||||||| |||||  ||| || ||||||  ||||||||    
T  31675556 atagaggtggtttttggtatagggtgctggtggtgagatatggtgaggaggcagggaggttggaggtagggggccg 31675481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 6825498 - 6825372
Alignment:
Q  152 gggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtgga 251  Q
    ||||||||||||||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||| |||||||||||||||  ||||||||| |||    
T  6825498 gggagtttaatattgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtagtttatggtatagggtgttggtggcgcggtatggtgagga 6825399  T
Q  252 ggatgggcggctggaggatgggggccg 278  Q
    ||||||| || ||| || |||||||||    
T  6825398 ggatgggaggttggcggttgggggccg 6825372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 25024273 - 25024453
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 216  Q
    |||||||  |||||||||||| |||| |  |||| ||||||||||| |  |||| | ||| |||||||||||| |  ||||||||||  | |||| |||     
T  25024273 aaaggagcttggagggttgggagttaggcagttgggggagtttaatttatctctttaaggaaaatggtgttggaggatgttagtggatagagatggtttt 25024372  T
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    |||| |||||||||||  ||||| ||||||| |||||  ||| || ||| || |||||| || |||||||||| |||||||    
T  25024373 tggtatagggtgttggaagctagatatggtgaggaggcagggaggttggcggttgggggtcggagttgttcttattggtgg 25024453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 34830118 - 34830030
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||||||||  | ||||||||||||||||||||||| | || ||||   || ||||||| |||| ||||||||||||||||||||||    
T  34830118 tctgtttgtttacgtaaggagtatggagggttgggggtgaggaagttgcatgaatttaatagtgctttgttaggtaaatggtgttggcg 34830030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 36709621 - 36709549
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||| |||||||||| || ||||| |||||||||||||||| |  |||||||||||||||||    
T  36709621 aaaggagcatggaggtttgggggttaggaagttgaaggagtttaatattgctttactaggtaaatggtgttgg 36709549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 8130565 - 8130482
Alignment:
Q  214 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    ||||||| |||||||||||| |||||||||||||||   |||||| || |||||| ||||||||| ||| |||||| |||||||    
T  8130565 ttgtggtatagggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggttgggggccggagtggttctttttggtgg 8130482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 278
Target Start/End: Original strand, 31920766 - 31920941
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 202  Q
    |||||||||||  ||||||||||||||||||| || || |    |||||||||||||||   |||| ||||||||||||||||||||||  |||| ||||    
T  31920766 tctgtttgtttacgaaaggagtatggagggttaggagtgagacagttgagggagtttaaccatgctttgttaggtaaatggtgttggcgaatgttggtgg 31920865  T
Q  203 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    |  | | || ||| |||| ||||||| ||||||  || ||||||| |||||  ||| || ||||||  ||||||||    
T  31920866 atagaggtggtttttggtatagggtgctggtggtgagatatggtgaggaggcagggaggttggaggtagggggccg 31920941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 276
Target Start/End: Original strand, 40513154 - 40513312
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    ||||||||||| || |||||||| | || ||||  ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |    
T  40513154 aaggagtatgggggtttgggggtgaggaagttgcaggattttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttat 40513253  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggc 276  Q
    ||| ||||||  |||| ||| ||||||||| |  || ||||||| |||||| |||||||    
T  40513254 ggtatagggtcctggtagctcggtatggtgagacggctgggcggttggaggttgggggc 40513312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 45684925 - 45684815
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||| |||||||||| |||  |||| | ||||  | |||||||| |||||| |||||||||| | | |||| |||||||||||||||| |  ||||||    
T  45684925 aaaattacttggataggttgggattctttgtgttcaaaaaaggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggta 45684826  T
Q  179 aatggtgttgg 189  Q
    |||||||||||    
T  45684825 aatggtgttgg 45684815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 22734095 - 22734224
Alignment:
Q  60 ggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagttt 159  Q
    |||| ||||||  ||||||||||| |||||| || | |||  |  |||||||||| | |||||||||||||| |||| ||| | || ||| ||||| |||    
T  22734095 ggggagtgaggatcataggaaaatatcttggttacgttggaatattgtttgtttgcgtaaggagtatggaggattggaggtgaggaagttaagggaattt 22734194  T
Q  160 aatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||||| |  |||||||||||||||||    
T  22734195 aatattgctttactaggtaaatggtgttgg 22734224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 44888599 - 44888474
Alignment:
Q  133 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 232  Q
    |||||||| | |||| |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||    
T  44888599 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 44888500  T
Q  233 tggctaggtatggtgtggaggatggg 258  Q
    ||||  | ||||||| ||||||||||    
T  44888499 tggcgcgttatggtgaggaggatggg 44888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 23604084 - 23604008
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 183  Q
    ||||||||| ||||||| |||| |||||||||||||  |||||| |||||||||||||| || | ||||| ||||||    
T  23604084 tttgtttgaaaaaggagaatggggggttgggggttaaaaggttgcgggagtttaatatttctttattagggaaatgg 23604008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 30166760 - 30166847
Alignment:
Q  104 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||||||  | ||||||| ||||||| |||||||| | |  ||||| ||| ||||||| |||| ||||||||||||||||||||||    
T  30166760 ctgtttgttccacaaaggagaatggaggtttgggggtgaggcagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcg 30166847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 3271119 - 3271201
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    ||||||||||||||| | ||||| ||||| |||| ||| |||| ||||||| || || |||| |||||||||||||| |||||    
T  3271119 tgtttgagaaaggaggagggaggtttgggtgttaggagtttgaaggagttttatcttactctcttaggtaaatggtggtggcg 3271201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 1231653 - 1231725
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| |||| ||||||||||||| |||||| || ||||||||| || || |||| || ||||||||||||    
T  1231653 aaaggaggatggggggttgggggttaggaggttaagagagtttaatttttctttgttggggaaatggtgttgg 1231725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 31548073 - 31548017
Alignment:
Q  133 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| | |||| |||||||||||||| || |||||||||| ||||||||||||    
T  31548073 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggaaaatggtgttgg 31548017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 46908100 - 46908171
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||||||||||| | | | ||| ||||||||||| ||||| |||||||||| |||| ||||    
T  46908100 aaggagtttggagggttgggggtgaggcgtttgtgggagtttaattttgctttgttaggtaagtggtcttgg 46908171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 17077754 - 17077868
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 243  Q
    |||||||||||||||||| | || | |||| || |||||||||| | | |||||||| ||| | ||||  |||||| ||| |||  |||||||||||||     
T  17077754 gaggttgagggagtttaacactgttttgttgggaaaatggtgttagaggttgttagtagagagagatgggttgtggcgtaaggttctggtggctaggtac 17077853  T
Q  244 ggtgtggaggatggg 258  Q
    || || |||||||||    
T  17077854 ggagtagaggatggg 17077868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Complemental strand, 55367321 - 55367249
Alignment:
Q  116 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||||||||| ||||||||||| | || ||||| ||| |||||| ||||  ||||||| ||||||||||||    
T  55367321 gaaaggagtatgg-gggttgggggtgaggaagttgaaggaatttaatcttgcgttgttaggaaaatggtgttgg 55367249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 35273790 - 35273726
Alignment:
Q  125 atggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||||||||||||||   ||||| | ||||||||| || |||||||||| || |||||||||    
T  35273790 atggagggttgggggttagacggttgggagagtttaatttttctctgttagggaagtggtgttgg 35273726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 42458703 - 42458758
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaata 163  Q
    ||||||||| ||||||| |||||||||| ||||| |  |||||||||||||||||||    
T  42458703 tttgtttgaaaaaggagaatggagggtt-ggggtgaaaaggttgagggagtttaata 42458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 42674868 - 42674940
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||| |||| ||| | ||| |||| |||||||||||||| | |  |||||||||||||||||    
T  42674868 aaaggagcatggaggtttggaggtgaggagattgaaggagtttaatattgttttactaggtaaatggtgttgg 42674940  T

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Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 109 - 324
Target Start/End: Complemental strand, 33170377 - 33170162
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| ||||||||||||||| |||| |||| ||| ||||||||||||||||||||| ||||||| |||||||||||| | |||||||| ||| | |    
T  33170377 tgtttgaggaaggagtatggagggatgggtgttaggagtttgagggagtttaatattgctttgttaggaaaatggtgttggaggttgttagtagagagag 33170278  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    |||  |||||| |||||||||| |||||||||||||||| || ||||||  |  |||||||||||||||| |||||||| | ||||||| ||||||||||    
T  33170277 atgggttgtggcgtagggtgttagtggctaggtatggtgcggcggatggtggtttggaggatgggggccggagttgttcatcttggtggcgggagatagt 33170178  T
Q  309 gagaatccgggatggg 324  Q
    ||| ||  ||||||||    
T  33170177 gaggattagggatggg 33170162  T

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Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 42514435 - 42514237
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||| ||||||| | |||||| | ||| | ||||     
T  42514435 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaattgtgttggaggttgttattagagagggatgc 42514336  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  42514335 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcagtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 42514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 27116598 - 27116796
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| |||||   ||||     
T  27116598 tgaggaaggagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagcaggatgc 27116697  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
     |||||| | | |||||| |||||||||||||| |||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  27116698 gttgtggagaaaggtgttagtggctaggtatggcgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagatcgtgag 27116796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 113 - 311
Target Start/End: Original strand, 30731739 - 30731937
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  30731739 tgaggaaggagtatggagggttgggagttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 30731838  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| |   ||| || ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  30731839 tttgtggagacaggtattagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcatggtggagggagattgtgag 30731937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 110 - 311
Target Start/End: Original strand, 28535098 - 28535298
Alignment:
Q  110 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 209  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||| ||||||||| | ||| |||| ||||||||||||||||| |||||| |||||   ||    
T  28535098 gtttgaggaagaagtatggagggttgggggttacgaggttgagagagtttaatttagct-tgttgggtaaatggtgttggcggttgttattggagaagga 28535196  T
Q  210 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 309  Q
     | ||||||| | | |||||||||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||    
T  28535197 agctttgtggagaaaggtgttggtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggagggagatagtg 28535296  T
Q  310 ag 311  Q
    ||    
T  28535297 ag 28535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 42928846 - 42928648
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||| |||| |||| ||||||||| ||||||||||||||| |||| || || ||||||||||| |||||| | ||  | || |     
T  42928846 tgaggaaggagtatggagggatgggtgttaggaggttgagagagtttaatattgctttgttgggaaagtggtgttggcgattgttaatagatagggaagc 42928747  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||| |||||||||||||||||||||||||||| ||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| || ||||||||||    
T  42928746 tttatggtgtagggtgttggtggctaggtatgatgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggaggcagatagtgag 42928648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 110 - 311
Target Start/End: Original strand, 35983213 - 35983414
Alignment:
Q  110 gtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtga 209  Q
    ||||||| ||||||||||||||||||||||||| ||||||||  ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   ||    
T  35983213 gtttgaggaaggagtatggagggttgggggttacgaggttgaaagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaagga 35983312  T
Q  210 tgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtg 309  Q
     | ||||||| | | ||||||||||||||||||||||| || ||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||    
T  35983313 agctttgtggagaaaggtgttggtggctaggtatggtgaggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtg 35983412  T
Q  310 ag 311  Q
    ||    
T  35983413 ag 35983414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 311
Target Start/End: Complemental strand, 23239093 - 23238900
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || |||||| |||| |||||||||||||| || |||||| ||||| | ||   |||||    
T  23239093 aaggagtatggagggttgggggttacgagattgagggagttcaacattgctttgttgggtaaatggtgttgacggttgttattggagagggaatctttgt 23238994  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    || | | |||||| ||||||||||||||||||| ||||||  |  |||||| ||||||||| |||||||| |  |||||| |||||||||||||    
T  23238993 ggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgag 23238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 102 - 311
Target Start/End: Original strand, 8299596 - 8299805
Alignment:
Q  102 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtg 201  Q
    |||||| || ||||| | |||||||||||||||||| |||| ||||||| | |||||||| |||||| |||| || |||||||||||| |  |||||||     
T  8299596 ttctgtgtgcttgaggagggagtatggagggttgggtgttaggaggttgcgagagtttaacattgctttgttggggaaatggtgttggaggctgttagtt 8299695  T
Q  202 gagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggg 301  Q
    ||  | |  | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| ||||||||||  |||||| |||    
T  8299696 gataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgttctttgtggtggaggg 8299795  T
Q  302 agatagtgag 311  Q
    |||| |||||    
T  8299796 agattgtgag 8299805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 289
Target Start/End: Complemental strand, 10780920 - 10780740
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | |||||||||||||||||| || | ||||||||| |||||||| |||||| |||| || ||||||||||||||  ||||||| ||  | |    
T  10780920 tgtttgaggagggagtatggagggttgggtgtgaggaggttgagagagtttaacattgctttgttggggaaatggtgttggcggctgttagttgataggg 10780821  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttctt 289  Q
      | ||||||| ||||||||||| ||||||||||||| |||| ||||||  |  |||||||||||||||| ||||| ||||    
T  10780820 gaggtttgtggagtagggtgttgttggctaggtatggagtggcggatggtggtttggaggatgggggccggagttgctctt 10780740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 31642195 - 31642028
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 243  Q
    ||||||||| ||||||||| | ||| |||| | ||||||||||||||| |||||| |||||   || | ||||||| | | ||||||||||||||| |||    
T  31642195 gaggttgagagagtttaatttagctttgttggataaatggtgttggcggttgttattggagaaggaagctttgtggagaaaggtgttggtggctagatat 31642096  T
Q  244 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  31642095 ggtgtggcggatggaggtttggaggatgggggccggagttgttcttcatggtggcgggagatagtgag 31642028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 303
Target Start/End: Complemental strand, 27796203 - 27796009
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||| |||||||| |||  ||| |||||  ||||||| |||||| || |||| |||||||||||||| |||||||| ||  | |    
T  27796203 tgtttgaggagggagtatggggggttgggtgttcggagattgagcaagtttaacattgctttgctagggaaatggtgttggcggttgttagttgatagag 27796104  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 303  Q
    | |  || ||| |||||||||||||||||||||||||||||| ||||||  |  |||||||||||||||  ||||||||||  |||||| |||||    
T  27796103 aggggttatggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggccagagttgttcttcgtggtggagggag 27796009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 297
Target Start/End: Complemental strand, 41590804 - 41590627
Alignment:
Q  120 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 219  Q
    |||||||||||| ||||||||   ||||||| ||||||||||| ||||  | ||||| |||||||||||||||||||| || ||| |   |  ||| |||    
T  41590804 ggagtatggaggtttgggggtgcggaggttgcgggagtttaatgttgcgttattaggcaaatggtgttggcgtttgttggttgagaggagtactttatgg 41590705  T
Q  220 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    | ||||||||||||||| |||||||||| |||||||||| || ||| || ||||||||| ||  |||||| |||||||    
T  41590704 tatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttgggggccggagaggttcttcttggtgg 41590627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 109 - 258
Target Start/End: Original strand, 27165386 - 27165535
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| ||||||||||||||| |||| |||| |||||||||  ||||||| |||||  || | || |||||||||||||| |||||||| ||  | |    
T  27165386 tgtttgaggaaggagtatggagggatgggtgttaggaggttgagaaagtttaacattgcattgctggggaaatggtgttggcggttgttagtagataggg 27165485  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 258  Q
    | |  |||| | ||| |||||||||||||||||||| |||||||||||||    
T  27165486 aagggttgttgcgtaaggtgttggtggctaggtatgttgtggaggatggg 27165535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 325
Target Start/End: Original strand, 22094627 - 22094887
Alignment:
Q  65 gtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatat 164  Q
    |||||| ||| |||||||| ||||||||||| ||||||||||||||| |   |||||||| ||||||||| |||||||    ||||| ||||||||||||    
T  22094627 gtgaggaacacaggaaaatatcttggataggctggtcttctgtttgtctccaaaaggagtttggagggttaggggttagacagttgaaggagtttaatat 22094726  T
Q  165 tgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctg 264  Q
    |||| |  |||| || ||||||||| |  ||||||||||  | | || ||| |||| ||| || || || ||| | ||||| | ||    |||| || ||    
T  22094727 tgctttactagggaagtggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgctcgttatggcgaggtttgtgggaggttg 22094826  T
Q  265 gaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatgggg 325  Q
    |||||||||||||||||||||||||  |||||| ||||| | | ||||||  |||||||||    
T  22094827 gaggatgggggccgaagttgttcttcgtggtggcgggaggtggggagaattagggatgggg 22094887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 258
Target Start/End: Original strand, 25856853 - 25857009
Alignment:
Q  102 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtg 201  Q
    |||||| || ||||| | |||||||||||||||||| |||| ||||||| | |||||||| |||||| |||| || |||||||||| | |  |||||||     
T  25856853 ttctgtgtgcttgaggagggagtatggagggttgggtgttaggaggttgcgagagtttaacattgctttgttggggaaatggtgttagaggctgttagtt 25856952  T
Q  202 gagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 258  Q
    ||  | |  | ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  25856953 gataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggg 25857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 120 - 297
Target Start/End: Original strand, 4297741 - 4297918
Alignment:
Q  120 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtgg 219  Q
    |||||||||||| ||||||||   ||||||| ||||||||||| ||||  | ||||| ||||||||||||| |||||| || ||| |   |  ||| |||    
T  4297741 ggagtatggaggtttgggggtgcggaggttgcgggagtttaatgttgcgttattaggcaaatggtgttggcatttgttggttgagaggagtagtttatgg 4297840  T
Q  220 tgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    | ||||||||||||||| |||||||||| |||||||||| || ||| || ||||| ||| ||  |||||| |||||||    
T  4297841 tatagggtgttggtggcgaggtatggtgaggaggatgggaggttggcggttggggcccggagaggttcttcttggtgg 4297918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 38358216 - 38358106
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||| |||||||||| |||  |||| | ||||  | |||||||| |||||| |||||||||| ||| |||| |||||||||||||||| |  ||||||    
T  38358216 aaaattacttggataggttgggattctttatgttctaaaaaggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggta 38358117  T
Q  179 aatggtgttgg 189  Q
    |||||||||||    
T  38358116 aatggtgttgg 38358106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 35122135 - 35122221
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 203  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||| ||||  |  |||| |||||||||||| |  ||||||||||    
T  35122135 aaaggagtctggagggttgggggttaggaggttgaggaagtttaatgttgcattactagggaaatggtgttggaggatgttagtgga 35122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 295
Target Start/End: Complemental strand, 380611 - 380434
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    |||||||||||||| |||||||| | |  ||||||||||||||||| ||   |  |||| ||||||||||||||  |||| |||||  | |||| ||| |    
T  380611 aaggagtatggaggtttgggggtcaggcagttgagggagtttaatagtgtcttactaggcaaatggtgttggcggatgttggtggatagagatggtttct 380512  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggt 295  Q
    ||| ||||||| |||  ||  ||||||||| |||||  ||| || |||||| ||||||||| ||| |||||| |||||    
T  380511 ggtatagggtgctggaagcgcggtatggtgaggaggcagggaggttggaggttgggggccggagtggttcttcttggt 380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 278
Target Start/End: Complemental strand, 476892 - 476763
Alignment:
Q  149 tgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgt 248  Q
    ||||||||||||||| |||| ||||||||||||||||||||||  |||| || ||  | |||| ||| |||| ||||||| |||| || || |||||||     
T  476892 tgagggagtttaatagtgctttgttaggtaaatggtgttggcgaatgttggtagatagagatggtttttggtatagggtgctggtagcgagatatggtga 476793  T
Q  249 ggaggatgggcggctggaggatgggggccg 278  Q
    |||||  ||| || ||||||  ||||||||    
T  476792 ggaggcagggaggttggaggtagggggccg 476763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 30509434 - 30509559
Alignment:
Q  75 taggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtta 174  Q
    |||||||||| |||||||||  |||  | |||||||||  | ||||||||  |||||||||||||||| || ||||| ||| |||||| | ||| || ||    
T  30509434 taggaaaattacttggatagattggaatactgtttgttctaaaaaggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgcta 30509533  T
Q  175 ggtaaatggtgttggcgtttgttagt 200  Q
    || |||||||||||| | ||||||||    
T  30509534 gggaaatggtgttggaggttgttagt 30509559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 200
Target Start/End: Original strand, 30549774 - 30549899
Alignment:
Q  75 taggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtta 174  Q
    |||||||||| |||||||||  |||  | |||||||||  | ||||||||  |||||||||||||||| || ||||| ||| |||||| | ||| || ||    
T  30549774 taggaaaattacttggatagattggaatactgtttgttctaaaaaggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgcta 30549873  T
Q  175 ggtaaatggtgttggcgtttgttagt 200  Q
    || |||||||||||| | ||||||||    
T  30549874 gggaaatggtgttggaggttgttagt 30549899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 27165525 - 27165573
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  27165525 tggaggatgggggccgaagttgttcttcttggtggagggagataatgag 27165573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 10486304 - 10486423
Alignment:
Q  73 cataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctg- 171  Q
    ||||||||||||  |||||||||||||    || ||||||  | ||||||||||||||| |||||||| |  | ||||| ||||||||||| |||| ||     
T  10486304 cataggaaaattagttggataggatggaaaactatttgttccaaaaaggagtatggaggtttgggggtgagaaagttgaaggagtttaatagtgctttgt 10486403  T
Q  172 ttaggtaaatggtgttggcg 191  Q
    ||||| ||||||||||||||    
T  10486404 ttagggaaatggtgttggcg 10486423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 36256392 - 36256309
Alignment:
Q  214 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    ||||||| |||||||||||| | ||| ||||||||   ||||||| || |||||||||||||||| ||| |||||| |||||||    
T  36256392 ttgtggtatagggtgttggttgttagatatggtgttagggatgggaggttggaggatgggggccggagtggttctttttggtgg 36256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 12825794 - 12825716
Alignment:
Q  233 tggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    |||||||||||||||||||||||||  |  ||||||||||||| |  ||||||||||  |||||| ||||||| |||||    
T  12825794 tggctaggtatggtgtggaggatggcagtttggaggatgggggtcagagttgttcttcgtggtggagggagattgtgag 12825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 26262292 - 26262377
Alignment:
Q  104 ctgtttgtttgagaaaggagtatggagggttgggggttatgag-gttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||| |||||||| |||| ||||||| || ||| ||| | ||||||||||||||| |||| ||||||| ||||||||||||    
T  26262292 ctgtttgtttaagaaaggaatatgaagggttgagg-ttaagagagatgagggagtttaatactgctttgttaggaaaatggtgttgg 26262377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 26261702 - 26261790
Alignment:
Q  73 cataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaa 161  Q
    |||||||||||||||||||| || |||    |||||||||| ||||| ||||||||| |||||||||| | |  | |||||||||||||    
T  26261702 cataggaaaatttcttggattggttggaaaactgtttgtttaagaaaagagtatggatggttgggggtaaggcagatgagggagtttaa 26261790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 34481672 - 34481585
Alignment:
Q  104 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||||||| | |||||||||||| || |||||||| | ||   ||| ||||||||| || ||| ||||||| ||||||||||||||    
T  34481672 ctgtttgtttaaaaaaggagtatggtggtttgggggtgaggaaagtgaaggagtttaacatagctttgttagggaaatggtgttggcg 34481585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 15862206 - 15862292
Alignment:
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 303  Q
    |||| |||||||||| | |||||||||||||  |||| ||||||| |||||| ||||||  | |||||||| | ||||||| |||||    
T  15862206 tggtatagggtgttgattgctaggtatggtgaagaggctgggcggttggaggttgggggatggagttgttcgtattggtggagggag 15862292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 41925796 - 41925734
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctc 169  Q
    ||||||||||||||||||||||||| || ||| ||| |    |||||||||||||||||||||    
T  41925796 tttgtttgagaaaggagtatggaggttttgggattaggccaatgagggagtttaatattgctc 41925734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 42039234 - 42039320
Alignment:
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggag 303  Q
    |||| ||||||||||||||| |  ||||||| || || ||||||| |||||||||||||||| |||  || || ||||||| |||||    
T  42039234 tggtatagggtgttggtggcgaaatatggtgaggtggttgggcggttggaggatgggggccggagtgctttttcttggtggagggag 42039320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 10460922 - 10460794
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    ||||||||||| ||||||||  ||||  |||| ||||| |   ||||||| ||||||| |||||||||| ||||||  | ||||||||  |  | |||||    
T  10460922 ataggaaaattgcttggataaaatgggattctatttgtgttccaaaggaggatggaggtttgggggttaggaggttaggagagtttaacttgtcactgtt 10460823  T
Q  174 aggtaaatggtgttggcgtttgttagtgga 203  Q
    ||| ||||||||||||||  ||||||||||    
T  10460822 agg-aaatggtgttggcggatgttagtgga 10460794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 26263407 - 26263487
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggtta-tgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||| |||| ||| |||| |||||||||||| | |||| | |||||||||||||| |||| ||||||| ||||||||||||    
T  26263407 tgtttaagaacggaatatgaagggttgggggtaagtgagat-gagggagtttaatactgctttgttaggaaaatggtgttgg 26263487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 38184106 - 38184033
Alignment:
Q  112 ttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtg 185  Q
    ||||| |||||| | ||||| ||||| ||||  ||||||| |||||||||| ||||||| || |||||||||||    
T  38184106 ttgagtaaggaggagggaggtttgggtgttagaaggttgaaggagtttaatcttgctctcttgggtaaatggtg 38184033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 38214251 - 38214324
Alignment:
Q  112 ttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtg 185  Q
    ||||| |||||| | ||||| ||||| ||||  ||||||| |||||||||| ||||||| || |||||||||||    
T  38214251 ttgagtaaggaggagggaggtttgggtgttagaaggttgaaggagtttaatcttgctctcttgggtaaatggtg 38214324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 25856999 - 25857047
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  25856999 tggaggatgggggccggagttgttctttgtggtggagggagattgtgag 25857047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 6051318 - 6051120
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  6051318 tgaggaaggagtatggagggttgggggttaagaggttgaaggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagcgggatgc 6051219  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||  |||||| ||||||| |||||    
T  6051218 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggcggtttggaggatgggggccggagttgttcttcgtggtggagggagattgtgag 6051120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 35541749 - 35541604
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||| | |||||| ||||| | ||||     
T  35541749 tgaggaagaagtatggagggttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgttattggagagggatgc 35541650  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 258  Q
    ||||||| | | |||||| |||||||||||||||||||||||||||    
T  35541649 tttgtggagaaaggtgttagtggctaggtatggtgtggaggatggg 35541604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 117 - 311
Target Start/End: Original strand, 47622506 - 47622700
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 216  Q
    ||||||||||||||||||||  |||| ||||||| | ||||||||||| || |||||||| ||||| ||||| ||||||||||| ||  | || |  ||     
T  47622506 aaaggagtatggagggttggctgttaggaggttgggagagtttaatatagccctgttaggaaaatgatgttgacgtttgttagttgatagggaagggtta 47622605  T
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||  ||| |||||||||||||||||||||||||| ||||||  |  |||||||| ||||||| |||||||||| ||||||| | |||||||||||    
T  47622606 tgacgtaaggtgttggtggctaggtatggtgtggtggatggaggtttggaggataggggccggagttgttcttcttggtggagagagatagtgag 47622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 20796368 - 20796296
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  20796368 aaaggagtctggaggattgggggttaggaggttgagggagtttaattttgctttgttaggtaaatggtgttgg 20796296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 49264393 - 49264465
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||  ||| | ||||||||||||||||||||    
T  49264393 aaaggagtctggagggttgggggttaggaggttgagggagtttaactttgttttgttaggtaaatggtgttgg 49264465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 39430988 - 39430916
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||||||||| ||||||| |||||||||||||||||||  |||| |||||||||| |||||||||    
T  39430988 aaaggagtctggagggttaggggttaggaggttgagggagtttaattgtgctttgttaggtaagtggtgttgg 39430916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 45796000 - 45795912
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||||||||  | ||||||||||||||||||||||| | || ||||  ||| ||||||| |||| ||||||||||||||||||||||    
T  45796000 tctgtttgtttacgtaaggagtatggagggttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggcg 45795912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 245
Target Start/End: Original strand, 32352696 - 32352867
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    ||||||||||||||||| || | |||    |||||||||| | |||||||||||| || |||||||| | ||  |||| |||||||||| | ||| ||||    
T  32352696 ataggaaaatttcttggttaagttggcaaactgtttgtttaaaaaaggagtatggcggtttgggggtgaggaaattgaaggagtttaatttagctttgtt 32352795  T
Q  174 aggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 245  Q
    ||| ||||||||||||||  |||| |||||  | | || |||||||| |||||| || || |||||||||||    
T  32352796 aggaaaatggtgttggcggatgttggtggatagaggtggtttgtggtatagggttttagtcgctaggtatgg 32352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 22191227 - 22191372
Alignment:
Q  133 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 232  Q
    |||||||| | |||| |||||||||||||| || ||||||||||||||||||||||| | || ||||| ||    | |  | |||||| |||||||||||    
T  22191227 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagggtagtatgtggtatagggtgttgg 22191326  T
Q  233 tggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    ||||  | ||||||| |||||||||| || ||| || |||||||||    
T  22191327 tggcgtgttatggtgaggaggatgggaggttggtggttgggggccg 22191372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 45270943 - 45270878
Alignment:
Q  126 tggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||| ||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  45270943 tggaggtttgggggtgcagaggttgagggagtttaatattgcattgttaggtaaatggtgttggcg 45270878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 276
Target Start/End: Original strand, 13867268 - 13867421
Alignment:
Q  123 gtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgt 222  Q
    ||||||||| |||||||| | || ||||  ||| ||||||| |||| ||||||||||||||||||||||  |||| |||||  | | || ||| |||| |    
T  13867268 gtatggaggtttgggggtgaggaagttgcaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggatagaggtggtttatggtat 13867367  T
Q  223 agggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggc 276  Q
    |||||  |||| ||| ||||||||| |  || ||||||| |||||| |||||||    
T  13867368 agggtcctggtagctcggtatggtgagacggctgggcggttggaggttgggggc 13867421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 278
Target Start/End: Original strand, 3544516 - 3544691
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 202  Q
    |||||||||||   ||||||||||||||||||||| || |    | ||||||||||||||  || | ||||||||||||||||||||||  |||| || |    
T  3544516 tctgtttgtttacaaaaggagtatggagggttgggagtgagatagctgagggagtttaattgtgttttgttaggtaaatggtgttggcgaatgttggtag 3544615  T
Q  203 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    |  | |||| ||| |||| ||||||| |||| || || ||||||| |||||  ||| || ||||||  ||||||||    
T  3544616 atagagatggtttttggtatagggtgctggtagcgagatatggtgaggaggcagggaggttggaggtagggggccg 3544691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 1248001 - 1248087
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||||   |||||||||||| ||||| ||||| | |  ||| ||||||||||||| |||| |||||||||||| |||||||    
T  1248001 tctgtttgtttacaaaaggagtatggggggttaggggtgaggcagttaagggagtttaatagtgctttgttaggtaaatagtgttgg 1248087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 33142652 - 33142782
Alignment:
Q  127 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtaggg 226  Q
    ||||| |||||||| | |||| |||| || |||||| | ||||| |||||||||||||||||| | |||||||| ||  | || |  ||||||| |||||    
T  33142652 ggaggattgggggtgaggaggatgagagaatttaatttggctctcttaggtaaatggtgttggaggttgttagttgatagagaaggcttgtggtataggg 33142751  T
Q  227 tgttggtggctaggtatggtgtggaggatgg 257  Q
    ||||||||||  | || |||| |||||||||    
T  33142752 tgttggtggcccgttacggtgaggaggatgg 33142782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 15174746 - 15174791
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  15174746 gaggttgagggagtttaatgttgctctgttagggaagtggtgttgg 15174791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 13112717 - 13112789
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| |||| ||||||||||||| |||||| || ||||||||| || || |||| || ||||||||||||    
T  13112717 aaaggaggatggggggttgggggttaggaggttaagagagtttaatttttctttgttggggaaatggtgttgg 13112789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 26131946 - 26131910
Alignment:
Q  153 ggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||| ||||||||||||||||||||||||||    
T  26131946 ggagtttaatgttgctctgttaggtaaatggtgttgg 26131910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 25504379 - 25504509
Alignment:
Q  73 cataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgt 172  Q
    ||||||||||| ||||||||||| |||   ||||||||| |    ||||||| ||||||||| |||||||    ||||| |||||||||||||||  |      
T  25504379 cataggaaaatatcttggataggttggagctctgtttgtctccagaaggagtttggagggttaggggttagacagttgatggagtttaatattgccttac 25504478  T
Q  173 taggtaaatggtgttggcgtttgttagtgga 203  Q
    |||| |||||||||||| |  ||||||||||    
T  25504479 tagggaaatggtgttggaggatgttagtgga 25504509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 3074429 - 3074384
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||| |||||||||||||| || |||||||||| ||||||||||||    
T  3074429 gaggatgagggagtttaatgtttctctgttaggaaaatggtgttgg 3074384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 21405521 - 21405476
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||| |||||||||||||| || |||||||||| ||||||||||||    
T  21405521 gaggatgagggagtttaatgtttctctgttaggaaaatggtgttgg 21405476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 44692104 - 44692059
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||||||||||||||||| ||| |||| ||||| |||||||||    
T  44692104 gaggttgagggagtttaatatagctttgtttggtaagtggtgttgg 44692059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 307
Target Start/End: Complemental strand, 14440463 - 14440265
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| ||||||||||| |  ||||||||||||||||||||||| ||  | |    
T  14440463 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctctgttggtgaaatggtgttggcgtttgttagttgataggg 14440364  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 307  Q
     || ||||||||||||||||||| |||||||||||||| ||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||||    
T  14440363 gtggtttgtggtgtagggtgttgttggctaggtatggtatggcggatggtggtttggaggatgggggccggagttgttcttcgtggtggagggagatag 14440265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 117 - 311
Target Start/End: Complemental strand, 28253431 - 28253237
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 216  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||| | || |||||||| ||||||||||||||||||||||||||| | || |  ||     
T  28253431 aaaggagtatggagggttgggtgtaaggaggttgagagagtttaatttagccctgttaggaaaatggtgttggcgtttgttagtggagagggaagggtta 28253332  T
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||| ||| |||||||  ||||||||||||||||| ||||||  |  |||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  28253331 tggcgtaaggtgttgagggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcttggtggagggagatagtgag 28253237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 365
Target Start/End: Complemental strand, 37445792 - 37445556
Alignment:
Q  130 gggttgggggttatgaggttgagggagtttaatattgctctgttaggt-aaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtg 228  Q
    ||||||||||||| || ||||||||||||||| |  ||| |||| ||  ||||||||||||||| ||||||| ||  ||||||  || ||| ||||||||    
T  37445792 gggttgggggttaggaagttgagggagtttaacaccgctttgttgggggaaatggtgttggcgtctgttagttgatagtgatgggttctggcgtagggtg 37445693  T
Q  229 ttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttg 328  Q
    ||||||||||||||||||| ||||||  || || |||||||||||||||| ||||||||||  ||||||||||||   |||||||| ||||| ||| |      
T  37445692 ttggtggctaggtatggtgcggaggacaggaggttggaggatgggggccggagttgttcttcgtggtggtgggagtgtgtgagaattcgggacgggataa 37445593  T
Q  329 aaggtaggagtgatgggtggtttgcgtcgtgtgtgtc 365  Q
     ||||||  |||||||||||||| ||  |||||||||    
T  37445592 gaggtagtggtgatgggtggtttacggagtgtgtgtc 37445556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 79 - 258
Target Start/End: Complemental strand, 12646270 - 12646091
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||||||||||| || |||  |||| | |||||||| | |||||||||||||||||| |||| ||||||||| ||||||||  ||| | ||||||| |    
T  12646270 aaaatttcttggattggttggaattctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaactttgttttgttaggaa 12646171  T
Q  179 aatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 258  Q
    ||||||||||| | |||||||| ||  | ||||  ||||||| ||||||||||||||||||||| |||||||||||||||    
T  12646170 aatggtgttggaggttgttagtagatagagatggattgtggtatagggtgttggtggctaggtaaggtgtggaggatggg 12646091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 33515628 - 33515827
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | ||||||||| ||| |||| |||| ||| || || |||||||| |||||| || |||| ||||||||||| || |||||||| ||  | |    
T  33515628 tgtttgaggagggagtatggggggctgggtgttaggagattaagagagtttaacattgctttgctagggaaatggtgttgacggttgttagttgatagag 33515727  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    |||  |||||| |||||||||||||||||||||||||||||| ||||||  |  ||||||||||||| || || |||||||  |||||| ||||||||||    
T  33515728 atgggttgtggcgtagggtgttggtggctaggtatggtgtggcggatggtggtttggaggatgggggtcggagctgttcttcgtggtggagggagatagt 33515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 297
Target Start/End: Complemental strand, 43310943 - 43310790
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtat 243  Q
    ||||||||||||||||||| ||||  ||||||| ||||||||||||||||| || |||||| |   |  |||||||| ||||||||||||||| || |||    
T  43310943 gaggttgagggagtttaatgttgcgttgttaggcaaatggtgttggcgtttattggtggagaggagtagtttgtggtatagggtgttggtggcgagatat 43310844  T
Q  244 ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    || | |||||||||| || |||||| ||||||||| ||| |||||| |||||||    
T  43310843 ggcgaggaggatgggaggttggaggttgggggccggagtggttcttcttggtgg 43310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 297
Target Start/End: Complemental strand, 26146895 - 26146746
Alignment:
Q  148 ttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtg 247  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||||| |   |  |||||||| ||||||||||||||| || ||||| |    
T  26146895 ttgagggagtttaatgttgcgttgttaggcaaatggtgttggcgtttgttggtggagaggagtagtttgtggtatagggtgttggtggcgagatatggcg 26146796  T
Q  248 tggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
     |||||||||| || |||||| ||||||||| ||| ||| || |||||||    
T  26146795 aggaggatgggaggttggaggttgggggccggagtggttattcttggtgg 26146746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 11233919 - 11233991
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| ||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||    
T  11233919 aaaggagtctggagggttgggggttaggaagttgagggagtttaattttgctttgttaggtaaatggtgttgg 11233991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 33583842 - 33583928
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||||   |||||||||||||||||||||||| | |  |||||||||||||||||| ||| ||||| ||||||||||||||    
T  33583842 tctgtttgtttacaaaaggagtatggagggttgggggtaaggcagttgagggagtttaatatagctttgttaagtaaatggtgttgg 33583928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 9668435 - 9668507
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||| || |||||||||||||| ||||||||||||||||||  ||||| |||||||||||| |||||||    
T  9668435 aaaggagtctgaagggttgggggttaggaggttgagggagtttaactttgctttgttaggtaaatagtgttgg 9668507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 35488586 - 35488465
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    ||||||||||||||||| |||  | |||| ||||  | || |||| ||||||| |||||||||| || ||||| |||||||||| ||||| |  ||||||    
T  35488586 aaaatttcttggataggttggaatactgtgtgttctaaaatggagcatggaggtttgggggttaggaagttgaaggagtttaatgttgctttactaggta 35488487  T
Q  179 aatggtgttggcgtttgttagt 200  Q
    ||||||||||| | ||||||||    
T  35488486 aatggtgttggaggttgttagt 35488465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 11197076 - 11196988
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||||||||| | | ||||||||||||||||||||| | |||||||  ||| |||||||  ||| ||||||| ||||||||||||||    
T  11197076 tctgtttgtttgtgtagggagtatggagggttgggggtaaggaggttgcaggaatttaatagcgctttgttaggcaaatggtgttggcg 11196988  T

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Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 28399941 - 28400051
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||| |||||||||| |||  |||| | ||||  | |||||||| |||||| |||||||||| | | |||| |||||||||||||||| |  ||||||    
T  28399941 aaaattacttggataggttgggattctttgtgttcaaaaaaggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggta 28400040  T
Q  179 aatggtgttgg 189  Q
    |||||||||||    
T  28400041 aatggtgttgg 28400051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 297
Target Start/End: Complemental strand, 13416285 - 13416202
Alignment:
Q  214 ttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    ||||||| | |||||||||| |||||||||||||||   |||||| || |||||||||||||||| ||| |||||  |||||||    
T  13416285 ttgtggtatcgggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggccggagtggttctatttggtgg 13416202  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 227
Target Start/End: Complemental strand, 13550841 - 13550718
Alignment:
Q  104 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 203  Q
    |||||||||| | |||||||| ||| || |||||||| | ||| |||| |||||||||||| ||  ||||||| |||||||||||| | ||||| || ||    
T  13550841 ctgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatatagcattgttagggaaatggtgttggaggttgttggttga 13550742  T
Q  204 gggtgatgatttgtggtgtagggt 227  Q
      | | ||||||||||| ||||||    
T  13550741 tagaggtgatttgtggtatagggt 13550718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 227
Target Start/End: Complemental strand, 13551294 - 13551171
Alignment:
Q  104 ctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 203  Q
    |||||||||| | |||||||| ||| || |||||||| | ||| |||| |||||||||||| ||  ||||||| |||||||||||| | ||||| || ||    
T  13551294 ctgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatatagcattgttagggaaatggtgttggaggttgttggttga 13551195  T
Q  204 gggtgatgatttgtggtgtagggt 227  Q
      | | ||||||||||| ||||||    
T  13551194 tagaggtgatttgtggtatagggt 13551171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 303
Target Start/End: Complemental strand, 20004662 - 20004483
Alignment:
Q  125 atggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtag 224  Q
    ||||||| |||||||||| || | ||||||||||||| | |||| ||||||  |||||||||||| |  ||||||| ||  | |  |||||||||| |||    
T  20004662 atggaggtttgggggttaggaagatgagggagtttaacactgctttgttagaaaaatggtgttggaggatgttagttgataggggagatttgtggtatag 20004563  T
Q  225 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggat-gggggccgaagttgttcttgttggtggtgggag 303  Q
    ||| ||||||||| | || |||| ||| |  ||| || |||||||| |||||  | ||||||||||  ||||||||||||    
T  20004562 ggtattggtggctggttacggtgaggatgtagggaggttggaggatggggggttggagttgttcttcgtggtggtgggag 20004483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 45422284 - 45422157
Alignment:
Q  64 tgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaata 163  Q
    |||||||  ||||| |||||| |||||||||| |||    |||||||||  | ||||||| ||||||| |||||||| |    ||||| ||| |||||||    
T  45422284 tgtgaggatcatagaaaaattacttggataggctggaaaactgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatttaata 45422185  T
Q  164 ttgctctgttaggtaaatggtgttggcg 191  Q
     |||| ||||||||||||||||||||||    
T  45422184 gtgctttgttaggtaaatggtgttggcg 45422157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 37437688 - 37437559
Alignment:
Q  130 gggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgt 229  Q
    |||||||||||||  | ||||||||||||||| |  ||| |||| || ||||||||||||||| ||||||| ||  ||||||  || ||| |  | ||||    
T  37437688 gggttgggggttagaaagttgagggagtttaacaccgctttgttggggaaatggtgttggcgtctgttagttgatagtgatgggttctggcgntgagtgt 37437589  T
Q  230 tggtggcta-ggtatggtgtggaggatggg 258  Q
    ||||||||| ||||||||  ||||||||||    
T  37437588 tggtggctagggtatggtacggaggatggg 37437559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 15018431 - 15018302
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    |||||||||| ||||||||||  |||  |||||||||| |   |||||||| |||||||||  ||||||    ||||| |||||||||||||||  | ||    
T  15018431 ataggaaaatatcttggatagcttggagttctgtttgtctccaaaaggagtttggagggttatgggttagacagttgaaggagtttaatattgccttatt 15018332  T
Q  174 aggtaaatggtgttggcgtttgttagtgga 203  Q
    ||| |||||||||||| | |||| ||||||    
T  15018331 agggaaatggtgttggaggttgtcagtgga 15018302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 15127057 - 15127102
Alignment:
Q  146 ggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||    
T  15127057 ggttgagggagtttaatgttgttatgttaggtaaatggtgttggcg 15127102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 10689238 - 10689178
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggag 204  Q
    ||||||||||||||||||| ||||  ||||||| || |||||||||||||| || ||||||    
T  10689238 gaggttgagggagtttaatgttgcgttgttaggaaagtggtgttggcgtttattggtggag 10689178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 42051722 - 42051774
Alignment:
Q  139 gttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||| |||||| ||||| |||||| |||| |||||||||||||||||||||||    
T  42051722 gttaggaggttaagggaatttaatgttgccctgttaggtaaatggtgttggcg 42051774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 43722474 - 43722546
Alignment:
Q  119 aggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    |||||| |||||| ||||||||   || | |||||||||||||| ||||  ||||||||||||||||||||||    
T  43722474 aggagtttggaggtttgggggtgcagaagatgagggagtttaatgttgcgttgttaggtaaatggtgttggcg 43722546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 15018242 - 15018180
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatgggg 325  Q
    |||||| |||||||||||||||||||| ||||||| ||||| ||| ||| ||  |||||||||    
T  15018242 tggaggttgggggccgaagttgttcttcttggtggcgggaggtagggaggattagggatgggg 15018180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 30504774 - 30504820
Alignment:
Q  151 agggagtttaatattgctctgttaggtaaatggtgttggcgtttgtt 197  Q
    |||||||||||||||||||||||||| || | |||||||| ||||||    
T  30504774 agggagtttaatattgctctgttagggaagtagtgttggcatttgtt 30504820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 36804827 - 36804758
Alignment:
Q  120 ggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||| ||||| |||||||||||| || |||||  ||||||||||||||| |  |||| ||||||||||||    
T  36804827 ggagcatggatggttgggggttaggaagttgaaagagtttaatattgctttactaggaaaatggtgttgg 36804758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 311
Target Start/End: Complemental strand, 2554321 - 2554123
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| |||||||||||||||||| |||||| ||||||||| |||||||| |||||| |||| ||||||||||||||||  |||||| ||||| | || |     
T  2554321 tgaggaaggagtatggagggttgagggttacgaggttgagagagtttaacattgctttgttgggtaaatggtgttggcagttgttattggagagggaagc 2554222  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    ||||||| | | |||||| ||||||||||||||||||| ||||||  |  |||||||||||||||| ||||||||||  |||||| |||||||| ||||    
T  2554221 tttgtggagaaaggtgttagtggctaggtatggtgtggcggatggaggtttggaggatgggggccggagttgttcttcgtggtggagggagataatgag 2554123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 109 - 311
Target Start/End: Original strand, 17605755 - 17605957
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || |||||||||||| |  ||||||| ||  | |    
T  17605755 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaatggtgttggtggctgttagttgataggg 17605854  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
      | ||||||| ||||||||||| ||||||||||||| |||||||||||  |  |||||||||||||||| |||||||||| || |||| ||||||| ||    
T  17605855 gaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggtggtttggaggatgggggccggagttgttcttctttgtggagggagattgt 17605954  T
Q  309 gag 311  Q
    |||    
T  17605955 gag 17605957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 117 - 308
Target Start/End: Original strand, 14372420 - 14372611
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttg 216  Q
    ||||||||||||||||||||| ||||  ||||| || ||||||||| | ||  ||||||| ||||||||| ||||||||||||||||| | || |  ||     
T  14372420 aaaggagtatggagggttgggtgttagaaggttaagagagtttaatttagccttgttaggaaaatggtgtaggcgtttgttagtggagagggaagggtta 14372519  T
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    ||| ||| |||||||||||||||||||||||||| ||| |   |  |||||||||||||||| |||||||||| ||||||| ||||||||||    
T  14372520 tggcgtaaggtgttggtggctaggtatggtgtggcggacgaaagtttggaggatgggggccggagttgttcttcttggtggagggagatagt 14372611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 82 - 308
Target Start/End: Original strand, 10576644 - 10576870
Alignment:
Q  82 atttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaat 181  Q
    ||||||||||| || |||  |||| | |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||| | |||| || ||||    
T  10576644 atttcttggattggttggagttctttgtgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgttttgttggggaaat 10576743  T
Q  182 ggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaag 281  Q
    ||||||||||  ||||||| ||  | |  | |||| || ||||||||||| |||||||||||||||||| ||||||  |  |||||||||||||||| ||    
T  10576744 ggtgttggcggctgttagttgataggggaggtttgcggagtagggtgttgttggctaggtatggtgtggcggatggtggtttggaggatgggggccggag 10576843  T
Q  282 ttgttcttgttggtggtgggagatagt 308  Q
    ||| ||||  |||||| ||||||||||    
T  10576844 ttgctcttcgtggtggagggagatagt 10576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 311
Target Start/End: Complemental strand, 13938437 - 13938236
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtg 208  Q
    |||||||| |||||||| |||||| |||| |||| ||| ||||| |||||||| |||||| ||||| | |||||||||||| | |||||||| ||| | |    
T  13938437 tgtttgaggaaggagtacggagggatgggtgttaggagattgagagagtttaacattgctttgttaagaaaatggtgttggaggttgttagtagagagag 13938338  T
Q  209 atgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    ||| || |||| |||||||||| |||||||||||||||| || ||||||  |  |||||||||||||||| |||||||| | |||||||  |||||||||    
T  13938337 atggtt-gtggcgtagggtgttagtggctaggtatggtgcggcggatggtggtttggaggatgggggccggagttgttcatcttggtggcaggagatagt 13938239  T
Q  309 gag 311  Q
    |||    
T  13938238 gag 13938236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 24766839 - 24766983
Alignment:
Q  113 tgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatga 212  Q
    |||| ||||||||||||||||||||||||| |||||| || ||||||||| ||||| |||||||||||||||||||||| |||||| | ||  | || |     
T  24766839 tgaggaaggagtatggagggttgggggttacgaggttaagagagtttaatgttgctttgttaggtaaatggtgttggcggttgttactagatagggaagc 24766938  T
Q  213 tttgtggtgtagggtgttggtggctaggtatggtgtggaggatgg 257  Q
    ||||||| | | |||||||||||||||||||||||||| ||||||    
T  24766939 tttgtggcgaaaggtgttggtggctaggtatggtgtggcggatgg 24766983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 310
Target Start/End: Original strand, 18681965 - 18682196
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    |||||||||||||   |||||  |||| ||||| |||| |||||||||  |||||||||  ||  |||||||||||| ||||| | |||| ||||||| |    
T  18681965 aaaatttcttggactagatggaattctatttgtatgaggaaggagtataaagggttgggttttcggaggttgagggattttaacactgctttgttaggaa 18682064  T
Q  179 aatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    ||||||||||| | |||||||| ||  | || |  || ||||||| |||||||||||| |||||||||  |||||||||  |  ||||||||||||||||    
T  18682065 aatggtgttggaggttgttagttgacagagaggggttatggtgtaaggtgttggtggccaggtatggttcggaggatggaggtttggaggatgggggccg 18682164  T
Q  279 aagttgttcttgttggtggtgggagatagtga 310  Q
     |||||||||| ||||||| ||||||||||||    
T  18682165 gagttgttcttcttggtggcgggagatagtga 18682196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 109 - 258
Target Start/End: Original strand, 21629543 - 21629692
Alignment:
Q  109 tgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga-gggt 207  Q
    |||||||| | |||||||||||||||||| |||| ||||||||| |||||||| |||||| |||| || |||| |||||||||  ||||||| ||  |||    
T  21629543 tgtttgaggagggagtatggagggttgggtgttaggaggttgagagagtttaacattgctttgttggggaaattgtgttggcggctgttagttgataggt 21629642  T
Q  208 gatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 258  Q
    || | ||||||| ||||||||||| ||||||||||||| ||||||||||||    
T  21629643 ga-ggtttgtggagtagggtgttgttggctaggtatggcgtggaggatggg 21629692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 305
Target Start/End: Original strand, 17577130 - 17577335
Alignment:
Q  102 ttctgtttgtttgagaaaggagtatggagggttgggggttat--gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttag 199  Q
    |||||| || ||||| | |||| ||||||||||||| |||||  ||||||| | |||||||| |||||| |||| || |||||||||||| |  ||||||    
T  17577130 ttctgtgtgcttgaggagggagcatggagggttgggtgttataggaggttgcgagagtttaacattgctttgttggggaaatggtgttggaggctgttag 17577229  T
Q  200 tggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtg 299  Q
    | ||  | |  | ||||||| ||||||||||| ||||||||||||| ||||||||||   |  |||||||||||||||  ||||||||||  |||||| |    
T  17577230 ttgataggggaggtttgtggagtagggtgttgttggctaggtatggcgtggaggatgatggtttggaggatgggggccagagttgttctttgtggtggag 17577329  T
Q  300 ggagat 305  Q
    ||||||    
T  17577330 ggagat 17577335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 10922140 - 10922067
Alignment:
Q  241 tatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaat 314  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  10922140 tatggtgtggaggatggaaggctgaaggatgggggccggagttgttcttcttggtggagggagatagtgagaat 10922067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 308
Target Start/End: Original strand, 20882456 - 20882653
Alignment:
Q  111 tttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgat 210  Q
    |||||| | ||||||||||||| |||| |||| ||||||||| |||||||| |||||| |||| |  |||||||||||||| |||||||| |   | |||    
T  20882456 tttgaggagggagtatggagggatgggtgttaggaggttgagagagtttaacattgctttgttggagaaatggtgttggcggttgttagttgttagggat 20882555  T
Q  211 gatttgtggtgtagggtgttggtggctaggtat-ggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagt 308  Q
    | ||||    ||||||||||||| |||||||||  |||||| ||||||  |  |||||||  ||||||| ||||||||||  |||||| ||||||||||    
T  20882556 ggtttgcaacgtagggtgttggtcgctaggtataagtgtggcggatggtggtttggagga-cggggccggagttgttcttcgtggtggagggagatagt 20882653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 13086250 - 13086178
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||  ||||||||||||||||| || ||||| |||||||||| ||||| ||||||||||||||||||||    
T  13086250 aaaggaggctggagggttgggggttaggaagttgaaggagtttaatgttgctttgttaggtaaatggtgttgg 13086178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 79 - 258
Target Start/End: Original strand, 15956383 - 15956561
Alignment:
Q  79 aaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggta 178  Q
    ||||| |||||||| || |||  |||| | ||||| | |||||||||||||||| ||   |||| | ||||||| || ||||||||||| ||||| || |    
T  15956383 aaaatatcttggattggttgggattctttgtgtttaaaaaaggagtatggagggatgtttgttaggtggttgagagactttaatattgccctgttgggaa 15956482  T
Q  179 aatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatggg 258  Q
    |||||| |||||| |||||| | ||  | ||  | |||||| ||| |||||||||||||||||||||||||| |||||||    
T  15956483 aatggttttggcggttgttaattgatagagaa-agttgtggcgtaaggtgttggtggctaggtatggtgtggcggatggg 15956561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 14843552 - 14843701
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 202  Q
    |||||||||||   ||||||||||||||||||||| || |  | | ||||||||||||||| || | ||||||||||||||||||||||  |||| || |    
T  14843552 tctgtttgtttacaaaaggagtatggagggttgggagtgagaaagctgagggagtttaatagtgatttgttaggtaaatggtgttggcgaatgttggtag 14843651  T
Q  203 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggag 252  Q
    |  | |||| ||| |||| ||||||| |||| || || ||||||| ||||    
T  14843652 atagagatggtttttggtatagggtgctggtagcgagatatggtgaggag 14843701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 17228712 - 17228636
Alignment:
Q  107 tttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatgg 183  Q
    ||||||||| ||||||  ||||||| |||||||| | |||||||||||||||||||||| || ||||||| ||||||    
T  17228712 tttgtttgaaaaaggataatggaggtttgggggtgaagaggttgagggagtttaatatttctttgttagggaaatgg 17228636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 5042066 - 5041980
Alignment:
Q  278 gaagttgttcttgttggtggtgggagatagtgagaatccgggatggggttgaaggtaggagtgatgggtggtttgcgtcgtgtgtgtc 365  Q
    |||||| ||||| ||||||| ||||||||||||||||||| |||||||| ||||||||  |||| ||||||||||   ||||||||||    
T  5042066 gaagttattctttttggtggagggagatagtgagaatccgagatggggtagaaggtagtcgtga-gggtggtttgttgcgtgtgtgtc 5041980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 34434944 - 34434897
Alignment:
Q  144 gaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  34434944 gaggttgagggagtttaatattgcattgttaggtaaatggtgttggcg 34434897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 227
Target Start/End: Complemental strand, 15674583 - 15674430
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    ||||||||||||||||| || | |||    |||||||||| | |||||||||||| || ||||||||   ||  |||| |||||||||| | ||| ||||    
T  15674583 ataggaaaatttcttggttaagctggcaaactgtttgtttaaaaaaggagtatggcggtttgggggtgcggaaattgaaggagtttaatttagctttgtt 15674484  T
Q  174 aggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggt 227  Q
    ||| ||||||||||||||  |||| |||||  | |||| |||||||| ||||||    
T  15674483 aggaaaatggtgttggcggatgttggtggaccgagatggtttgtggtatagggt 15674430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 1104375 - 1104459
Alignment:
Q  116 gaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagt 200  Q
    ||||||| | ||||||||| ||||||| |  | |||||||| |||| | |||| |||||||||||||||||||| ||||||||||    
T  1104375 gaaaggattctggagggtttggggttaggcagatgagggagattaacactgctttgttaggtaaatggtgttggagtttgttagt 1104459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 21549559 - 21549487
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||||| ||||||| |||||||| | ||| |||| |||||||||||||||| |  |||||||||||||||||    
T  21549559 aaaggagcatggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaatggtgttgg 21549487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 303
Target Start/End: Original strand, 502917 - 503147
Alignment:
Q  73 cataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgt 172  Q
    ||||||||||| ||||||||||| |||   ||||||||| |   |||||||| ||||||||| |||||||    ||||| |||||||||||||||  |      
T  502917 cataggaaaatgtcttggataggttggagctctgtttgtctacaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgccttac 503016  T
Q  173 taggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgg 272  Q
    |||| |||||||||||| |  ||||||||||  | | || ||| || | ||| || || || ||  | ||||| | || |  |||| || ||||||||||    
T  503017 tagggaaatggtgttggaggatgttagtggataggggtggtttttgatatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggatgg 503116  T
Q  273 gggccgaagttgttcttgttggtggtgggag 303  Q
    |||||| |||||||||| ||||||| |||||    
T  503117 gggccggagttgttcttcttggtggcgggag 503147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 275
Target Start/End: Complemental strand, 18589011 - 18588902
Alignment:
Q  166 gctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctgg 265  Q
    ||||| || ||||| |||||||||||||||||||| ||  | || |  || |||| | | |||||||||||||| ||||||| |||||| ||| || |||    
T  18589011 gctctattgggtaagtggtgttggcgtttgttagttgatagagacgggttatggtatcgagtgttggtggctagatatggtgaggaggacgggaggttgg 18588912  T
Q  266 aggatggggg 275  Q
    ||||||||||    
T  18588911 aggatggggg 18588902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 278
Target Start/End: Complemental strand, 29056214 - 29056069
Alignment:
Q  133 ttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttgg 232  Q
    |||||||| | |||| |||||||||||||| || |||||||||  |||||||||||| | || ||||| ||    |||  | |||||| |||||||||||    
T  29056214 ttgggggtgaggaggatgagggagtttaatgtttctctgttagaaaaatggtgttggaggttattagtcgataaagatagtatgtggtatagggtgttgg 29056115  T
Q  233 tggctaggtatggtgtggaggatgggcggctggaggatgggggccg 278  Q
    | ||  | ||||||| |||||||||| || ||| || |||||||||    
T  29056114 tagcacgttatggtgaggaggatgggaggttggcggttgggggccg 29056069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 5085601 - 5085641
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggag 303  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  5085601 tggaggatgggggccgaagttgttcttcttggtggcgggag 5085641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 15602927 - 15602855
Alignment:
Q  225 ggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtgg 297  Q
    ||||||||| |||||||||||||||   |||||| || |||||||||||||||| ||| |||||  |||||||    
T  15602927 ggtgttggttgctaggtatggtgtgcgtgatgggaggttggaggatgggggccggagtggttctatttggtgg 15602855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 310
Target Start/End: Complemental strand, 32186393 - 32186201
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    |||||||||| |||| ||||||| | |  ||| || ||||||||| | ||  |||| | ||||||||||||||  ||||| |||||  | | ||  || |    
T  32186393 aaggagtatgaagggctgggggtgaggcagtttagagagtttaatttagccttgttggataaatggtgttggcagttgttggtggatagaggtgggtttt 32186294  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtga 310  Q
    ||| ||||||||||||||| || ||| ||| || || |||| || |||||| ||||||||| |||  ||||| ||||||| ||||| ||||||    
T  32186293 ggtatagggtgttggtggcgagatatagtgaggtggctgggaggttggaggttgggggccggagtgcttcttcttggtggagggaggtagtga 32186201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 181
Target Start/End: Original strand, 15987896 - 15988003
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    ||||||||||||||||||| || |||  |  | | |||||||| ||||| ||| |||| || ||||||| || | ||| ||||||||| |||||| ||||    
T  15987896 ataggaaaatttcttggattggttggcataatatatgtttgagtaaggattattgaggtttaggggttaggaagatgatggagtttaacattgctttgtt 15987995  T
Q  174 aggtaaat 181  Q
    ||||||||    
T  15987996 aggtaaat 15988003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 26514335 - 26514245
Alignment:
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatag 307  Q
    |||| ||| |||||||||||| ||||||||| |||||  ||| |  |||||| ||||||||| ||| |||||  ||||||| |||||||||    
T  26514335 tggtatagagtgttggtggctcggtatggtgaggaggcagggagtttggaggttgggggccggagtggttctatttggtggagggagatag 26514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 271
Target Start/End: Original strand, 7956149 - 7956254
Alignment:
Q  166 gctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctgg 265  Q
    |||||||| ||||| || ||||||||| ||||||| ||  | |||| | | |||| | | |||||||||||||| ||||||| |||||| ||| || |||    
T  7956149 gctctgttgggtaagtgatgttggcgtatgttagttgatagagatggtctttggtatcgagtgttggtggctagatatggtgaggaggacgggaggttgg 7956248  T
Q  266 aggatg 271  Q
    ||||||    
T  7956249 aggatg 7956254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 24767004 - 24767065
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggagatagtgagaatccgggatggg 324  Q
    ||||||||||||| || ||||||||||  |||||| ||||||||||||| ||  ||||||||    
T  24767004 tggaggatgggggtcggagttgttcttcgtggtggagggagatagtgaggattagggatggg 24767065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 26206095 - 26205978
Alignment:
Q  74 ataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgtt 173  Q
    ||||||||||||||||| || | |||    |||||||||| | |||||||| ||| || |||||||| | ||| |||| ||||||||||||  |  ||||    
T  26206095 ataggaaaatttcttggttaagttggcaaactgtttgtttaaaaaaggagtgtggcggtttgggggtgaggagattgaaggagtttaatataacattgtt 26205996  T
Q  174 aggtaaatggtgttggcg 191  Q
    | | ||||||||||||||    
T  26205995 aaggaaatggtgttggcg 26205978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 203
Target Start/End: Complemental strand, 33805482 - 33805405
Alignment:
Q  126 tggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 203  Q
    ||||||||||||||| | || ||||| |||||||||| ||||  || |||| |||||||||||| |  ||||||||||    
T  33805482 tggagggttgggggtcaggaagttgaaggagtttaatgttgcattgctagggaaatggtgttggaggatgttagtgga 33805405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 7217718 - 7217806
Alignment:
Q  75 taggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaata 163  Q
    ||||||||||||||||||   ||||  | || |||||||||  |||||| |||||||||||||||| |  ||||||| ||| |||||||    
T  7217718 taggaaaatttcttggattaaatgggatactatttgtttgaataaggagaatggagggttgggggtgaaaaggttgaaggaatttaata 7217806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 8264788 - 8264748
Alignment:
Q  263 tggaggatgggggccgaagttgttcttgttggtggtgggag 303  Q
    |||||||||||||||| |||||||||| ||||||| |||||    
T  8264788 tggaggatgggggccggagttgttcttcttggtggcgggag 8264748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 14552073 - 14552041
Alignment:
Q  157 tttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||||||| ||||||||||||||||||    
T  14552073 tttaatattgctctattaggtaaatggtgttgg 14552041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 19616348 - 19616380
Alignment:
Q  157 tttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||||| ||||||||||||||||||||    
T  19616348 tttaatattgctttgttaggtaaatggtgttgg 19616380  T

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Target: scaffold0472 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 118 - 311
Target Start/End: Complemental strand, 3962 - 3769
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgt 217  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| | |||| |||||    
T  3962 aaggagtatggagggttggaggttacgagattgagggagtttaacattgctttgttgggtaaatggtgttggcggttgttattggagagggatgctttgt 3863  T
Q  218 ggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtgggagatagtgag 311  Q
    || | | |||||| ||||||||||||||||||  ||||||  |  |||||| ||||||||| |||||||| |  |||||| |||||||||||||    
T  3862 ggagaaaggtgttagtggctaggtatggtgtgacggatggaggtttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgag 3769  T

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Target: scaffold0131 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 3928 - 4113
Alignment:
Q  60 ggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagttt 159  Q
    |||| ||||||  ||||||||||||   ||||||||||||    || ||||||  | ||||||||||||||| |||||||| |    ||||| |||||||    
T  3928 ggggagtgaggatcataggaaaattagctggataggatggaaaactatttgttcaaaaaaggagtatggaggtttgggggtgagacagttgaaggagttt 4027  T
Q  160 aatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 245  Q
    |||| |||||||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  4028 aatagtgctctgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 4113  T

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Target: scaffold0002 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 327507 - 327692
Alignment:
Q  60 ggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagttt 159  Q
    |||| ||||||  ||||||||||||   ||||||||||||    || ||||||  ||||||||||||||||| |||||||| |    ||||| |||||||    
T  327507 ggggagtgaggatcataggaaaattagctggataggatggaaaactatttgttccagaaaggagtatggaggtttgggggtgagacagttgaaggagttt 327606  T
Q  160 aatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 245  Q
    |||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  327607 aatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 327692  T

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Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 312053 - 312238
Alignment:
Q  60 ggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagttt 159  Q
    |||| ||||||  ||||||||||||   ||||||||||||    || ||||||  ||||||||||| ||||| |||||||| |    ||||| |||||||    
T  312053 ggggagtgaggatcataggaaaattagctggataggatggaaaactatttgttccagaaaggagtacggaggtttgggggtgagacagttgaaggagttt 312152  T
Q  160 aatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 245  Q
    |||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  312153 aatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 312238  T

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Target: scaffold0016 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 28455 - 28344
Alignment:
Q  147 gttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatggt 246  Q
    ||||||||||||||||  |||  ||||||| |||||||||||||||||||| |||||| |   |  |||||||| ||||||||||||||| || |||||     
T  28455 gttgagggagtttaatgctgcgttgttaggcaaatggtgttggcgtttgttggtggagaggagtagtttgtggtatagggtgttggtggcaagatatggc 28356  T
Q  247 gtggaggatggg 258  Q
    | ||||||||||    
T  28355 gaggaggatggg 28344  T

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Target: scaffold0043 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 103 - 252
Target Start/End: Original strand, 34024 - 34173
Alignment:
Q  103 tctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgg 202  Q
    |||||||||||   ||||||||||||||||||||| || |    | ||||||||||||||| |||| ||||||||||| ||||||||||  |||| || |    
T  34024 tctgtttgtttacaaaaggagtatggagggttgggagtgagacagctgagggagtttaatagtgctttgttaggtaaaaggtgttggcgaatgttggtag 34123  T
Q  203 agggtgatgatttgtggtgtagggtgttggtggctaggtatggtgtggag 252  Q
    || | |||| ||| |||| ||||||| |||| || || ||||||| ||||    
T  34124 agagagatggtttttggtatagggtgctggtagcgagatatggtgaggag 34173  T

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Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 134226 - 134411
Alignment:
Q  60 ggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagttt 159  Q
    |||| ||||||  ||||||||||||   ||||||||||||    || ||||||  ||||||||||| ||||| |||||||| |    ||||| |||||||    
T  134226 ggggagtgaggatcataggaaaattagctggataggatggaaaactatttgttccagaaaggagtacggaggtttgggggtgagacagttgaaggagttt 134325  T
Q  160 aatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 245  Q
    |||| |||| ||||||| ||||||||||||||  |||| |||||  | |||| |||||||| |||||| || || || ||||||||    
T  134326 aatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtatagggttttagttgccaggtatgg 134411  T

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Target: scaffold0309 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 715 - 794
Alignment:
Q  118 aaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgtt 197  Q
    |||||| | ||||| |||||||| | |||| |||||||||||||| ||||||| ||||| || |||||||||||| ||||    
T  715 aaggaggaaggaggtttgggggtcaggaggatgagggagtttaatgttgctctattagggaagtggtgttggcgtatgtt 794  T

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Target: scaffold0418 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 8373 - 8187
Alignment:
Q  59 aggggtgtgagggacataggaaaatttcttggataggatggtcttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtt 158  Q
    |||| |||||||  ||||| |||||| |||||||||| |||     ||||||||  | ||||||| ||||||| |||||||| |    ||||| ||| ||    
T  8373 agggatgtgaggatcatagaaaaattacttggataggctggaaaattgtttgttccacaaaggagaatggaggtttgggggtgagacagttgaaggaatt 8274  T
Q  159 taatattgctctgttaggtaaatggtgttggcgtttgttagtggagggtgatgatttgtggtgtagggtgttggtggctaggtatgg 245  Q
    ||||| |||| ||||||||||||||||||||||  |||| |||||  | | || |||||||| ||| || || || |||||||||||    
T  8273 taatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttgtggtatagtgtcttagttgctaggtatgg 8187  T

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Target: scaffold0308 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 17856 - 17770
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcgtttgttagtgga 203  Q
    |||||||| ||||||||||||||| | || ||||| |||||||||| ||||  || |||| |||||||||||| |  ||||||||||    
T  17856 aaaggagtttggagggttgggggtcaggaagttgaaggagtttaatgttgcattgctagggaaatggtgttggtggatgttagtgga 17770  T

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Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 63737 - 63802
Alignment:
Q  126 tggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttggcg 191  Q
    ||||||||||||||||| |  |||||||||||||||| | ||| || |||| ||||||||||||||    
T  63737 tggagggttgggggttaggcagttgagggagtttaatttagctttgctagggaaatggtgttggcg 63802  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 2993 - 3080
Alignment:
Q  102 ttctgtttgtttgagaaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    |||||||||||||  ||||||| | |||||||||||||||| |  |||||| |  |||||| || || | ||||||||||||||||||    
T  2993 ttctgtttgtttgccaaaggaggacggagggttgggggttaggcagttgagagcttttaatttttctttattaggtaaatggtgttgg 3080  T

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Target: scaffold0250 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 12526 - 12464
Alignment:
Q  127 ggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgttgg 189  Q
    ||||| || ||||||| | |||||||||||||| || | ||| ||||||||||||||||||||    
T  12526 ggaggtttaggggttaggcggttgagggagtttcatgtggctgtgttaggtaaatggtgttgg 12464  T

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Target: scaffold0112 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 15090 - 15160
Alignment:
Q  117 aaaggagtatggagggttgggggttatgaggttgagggagtttaatattgctctgttaggtaaatggtgtt 187  Q
    ||||||| ||||||  |||||||||| || ||||| ||| |||||||||||| |  |||||||||||||||    
T  15090 aaaggagcatggagttttgggggttaggaagttgaaggattttaatattgctttactaggtaaatggtgtt 15160  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 67691 - 67606
Alignment:
Q  217 tggtgtagggtgttggtggctaggtatggtgtggaggatgggcggctggaggatgggggccgaagttgttcttgttggtggtggga 302  Q
    |||| |||||||||| |  |||||||||||| |||||  ||| || |||||| ||||||| | ||| |||||| ||||||||||||    
T  67691 tggtatagggtgttgatttctaggtatggtgaggaggcagggaggttggaggttgggggctggagtggttcttcttggtggtggga 67606  T

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