View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8905A_low_46 (Length: 366)
Name: NF8905A_low_46
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_46 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 14 - 354
Target Start/End: Original strand, 9897822 - 9898162
Alignment:
| Q |
14 |
tggacatcattatgaagcatgaccgaacaaggtttagcttcccctgcaccttggtttggatctaagacaatgtagatatttaccagcacgactaaattac |
113 |
Q |
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| T |
9897822 |
tggacatcattatgaagcatgaccgaacaaggtttagcttcccctgccccttggtttggatctaagacaatgtagatatttaccagcacgactccattgc |
9897921 |
T |
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| Q |
114 |
actggggtggctagccctgatgacaagtcaattgtttgtattacatccctattatagcctagccatttttgaatatggtcgacatggaatgtttgattct |
213 |
Q |
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| T |
9897922 |
actggggtggctagccctgatgacaagtcaattgtttgtattacatccctattatagcctagccatttttgaatatggtcgacatggaatgtttgattct |
9898021 |
T |
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| Q |
214 |
ttggccactccattatagccaaatcgcttaagaatgtggtagacttacgaggtttagttctttgaccactccattataacctattcatttaagaacgggg |
313 |
Q |
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| T |
9898022 |
ttggccactccattatagccaaatcgcttaagaatgtggtagacttacgaggtttagttctttgaccactccattatagcctattcatttaagaacgggg |
9898121 |
T |
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| Q |
314 |
ttgactctgaaggttttattctttgactgctcccttatatt |
354 |
Q |
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| T |
9898122 |
tcgactttgaaggttttattctttgactgctcccttatatt |
9898162 |
T |
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