View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8905A_low_58 (Length: 348)

Name: NF8905A_low_58
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8905A_low_58
NF8905A_low_58
[»] chr1 (50 HSPs)
chr1 (234-329)||(7420724-7420819)
chr1 (240-294)||(51436352-51436406)
chr1 (234-327)||(18610860-18610952)
chr1 (240-297)||(37741870-37741927)
chr1 (239-300)||(50777338-50777399)
chr1 (236-305)||(19920852-19920923)
chr1 (229-297)||(29094666-29094734)
chr1 (229-297)||(6396410-6396480)
chr1 (250-305)||(27895671-27895726)
chr1 (229-292)||(43757671-43757734)
chr1 (225-268)||(48390026-48390069)
chr1 (239-306)||(50035447-50035514)
chr1 (239-297)||(644791-644849)
chr1 (239-297)||(2827628-2827686)
chr1 (239-297)||(27787584-27787642)
chr1 (239-297)||(46903565-46903623)
chr1 (224-286)||(29362621-29362685)
chr1 (246-306)||(25130805-25130865)
chr1 (221-286)||(25302574-25302641)
chr1 (229-306)||(25995543-25995622)
chr1 (239-299)||(41558088-41558148)
chr1 (235-286)||(3607963-3608014)
chr1 (229-297)||(13813641-13813711)
chr1 (224-271)||(23472186-23472233)
chr1 (239-306)||(29489268-29489335)
chr1 (229-297)||(37947138-37947208)
chr1 (239-302)||(39669901-39669964)
chr1 (239-328)||(48028621-48028709)
chr1 (235-297)||(3919389-3919451)
chr1 (243-297)||(21446136-21446190)
chr1 (239-297)||(24158745-24158803)
chr1 (239-273)||(32873436-32873470)
chr1 (239-297)||(34941838-34941896)
chr1 (229-300)||(36669285-36669358)
chr1 (239-273)||(42829250-42829284)
chr1 (231-286)||(42843273-42843330)
chr1 (239-297)||(43105200-43105258)
chr1 (239-297)||(51168686-51168744)
chr1 (239-300)||(6829700-6829761)
chr1 (239-300)||(7371863-7371924)
chr1 (236-273)||(25239179-25239216)
chr1 (239-300)||(26501390-26501451)
chr1 (229-286)||(36930685-36930742)
chr1 (235-324)||(37619984-37620073)
chr1 (240-324)||(9882555-9882639)
chr1 (229-273)||(19651493-19651537)
chr1 (229-298)||(39010897-39010968)
chr1 (235-291)||(40052997-40053053)
chr1 (229-306)||(43195998-43196077)
chr1 (278-330)||(50775179-50775231)
[»] chr8 (48 HSPs)
chr8 (241-329)||(33511698-33511786)
chr8 (229-305)||(34970290-34970366)
chr8 (239-306)||(6825186-6825253)
chr8 (229-276)||(8428957-8429004)
chr8 (229-327)||(8142903-8143000)
chr8 (239-329)||(36675420-36675510)
chr8 (239-297)||(42651015-42651073)
chr8 (235-299)||(8074641-8074705)
chr8 (229-282)||(40211680-40211735)
chr8 (229-305)||(30927841-30927919)
chr8 (229-300)||(2597075-2597148)
chr8 (235-305)||(4265534-4265604)
chr8 (235-300)||(7900380-7900446)
chr8 (239-297)||(21273628-21273686)
chr8 (236-298)||(24503009-24503071)
chr8 (239-329)||(43605555-43605645)
chr8 (239-297)||(45405753-45405811)
chr8 (229-295)||(3394622-3394690)
chr8 (235-327)||(7678823-7678914)
chr8 (239-299)||(20994974-20995034)
chr8 (221-298)||(22767205-22767284)
chr8 (225-286)||(28772384-28772447)
chr8 (224-273)||(36497739-36497790)
chr8 (229-330)||(43587724-43587827)
chr8 (239-298)||(154385-154444)
chr8 (243-302)||(22999464-22999523)
chr8 (239-286)||(32185595-32185642)
chr8 (239-305)||(5924905-5924971)
chr8 (239-305)||(5925150-5925216)
chr8 (235-305)||(6105345-6105415)
chr8 (229-300)||(13884399-13884472)
chr8 (235-297)||(13924100-13924162)
chr8 (229-300)||(19723121-19723194)
chr8 (246-328)||(23265240-23265322)
chr8 (239-297)||(25430741-25430799)
chr8 (236-270)||(35701788-35701822)
chr8 (229-300)||(41273598-41273671)
chr8 (246-295)||(14233564-14233613)
chr8 (235-328)||(33944850-33944943)
chr8 (239-300)||(41293637-41293697)
chr8 (224-273)||(5359416-5359467)
chr8 (239-291)||(5742581-5742633)
chr8 (231-300)||(11138981-11139052)
chr8 (229-297)||(21649088-21649156)
chr8 (239-299)||(29910128-29910188)
chr8 (239-283)||(33635670-33635714)
chr8 (229-298)||(34247857-34247928)
chr8 (245-305)||(43602333-43602393)
[»] chr7 (42 HSPs)
chr7 (239-326)||(32315921-32316008)
chr7 (235-305)||(26041401-26041471)
chr7 (239-296)||(47379655-47379712)
chr7 (239-291)||(28548159-28548211)
chr7 (229-305)||(39369385-39369463)
chr7 (219-286)||(2005802-2005871)
chr7 (236-297)||(384643-384704)
chr7 (231-300)||(37385148-37385219)
chr7 (241-292)||(42118620-42118671)
chr7 (237-323)||(7458172-7458258)
chr7 (239-305)||(33050278-33050344)
chr7 (239-297)||(37970028-37970086)
chr7 (229-300)||(42431806-42431879)
chr7 (239-297)||(44185271-44185329)
chr7 (243-324)||(31467703-31467784)
chr7 (219-285)||(35212887-35212955)
chr7 (239-300)||(35590710-35590771)
chr7 (227-292)||(48383243-48383308)
chr7 (239-291)||(11070323-11070375)
chr7 (229-298)||(12102626-12102697)
chr7 (231-300)||(25614736-25614807)
chr7 (239-298)||(7295562-7295621)
chr7 (229-305)||(32044863-32044941)
chr7 (239-298)||(37149392-37149451)
chr7 (235-306)||(42060748-42060819)
chr7 (235-306)||(47530200-47530271)
chr7 (239-305)||(2323388-2323454)
chr7 (239-297)||(2600452-2600510)
chr7 (239-305)||(7410495-7410560)
chr7 (235-305)||(17157224-17157294)
chr7 (239-297)||(23034231-23034289)
chr7 (246-300)||(27164752-27164806)
chr7 (239-297)||(27704530-27704588)
chr7 (229-300)||(30864332-30864405)
chr7 (229-300)||(38978575-38978648)
chr7 (235-305)||(44511230-44511300)
chr7 (219-291)||(640463-640539)
chr7 (239-300)||(10014870-10014931)
chr7 (224-273)||(18925941-18925990)
chr7 (231-292)||(43550960-43551021)
chr7 (229-273)||(21588869-21588913)
chr7 (246-306)||(48057406-48057466)
[»] chr3 (60 HSPs)
chr3 (239-306)||(35756075-35756142)
chr3 (239-300)||(34021378-34021439)
chr3 (229-305)||(28263628-28263706)
chr3 (239-330)||(44910799-44910890)
chr3 (239-297)||(16295559-16295617)
chr3 (239-305)||(43900867-43900933)
chr3 (229-300)||(54233416-54233489)
chr3 (234-327)||(50621953-50622046)
chr3 (237-297)||(29533854-29533914)
chr3 (239-327)||(34208362-34208450)
chr3 (229-273)||(2482616-2482662)
chr3 (240-291)||(38471738-38471789)
chr3 (235-286)||(38692255-38692306)
chr3 (229-305)||(44855334-44855412)
chr3 (224-300)||(50879673-50879751)
chr3 (229-305)||(52454002-52454080)
chr3 (235-297)||(5188327-5188389)
chr3 (235-273)||(7039173-7039211)
chr3 (239-305)||(11327203-11327269)
chr3 (229-300)||(13159744-13159817)
chr3 (239-297)||(49886758-49886816)
chr3 (239-297)||(50025603-50025661)
chr3 (239-300)||(36819051-36819112)
chr3 (239-328)||(47683885-47683974)
chr3 (235-300)||(53102817-53102882)
chr3 (241-297)||(1031345-1031401)
chr3 (241-297)||(21481861-21481917)
chr3 (229-273)||(29525316-29525360)
chr3 (239-299)||(43460483-43460543)
chr3 (239-330)||(9027708-9027799)
chr3 (229-297)||(33971966-33972036)
chr3 (229-305)||(41877771-41877849)
chr3 (229-297)||(44127110-44127180)
chr3 (235-286)||(48178984-48179035)
chr3 (221-297)||(49361755-49361833)
chr3 (235-286)||(54379397-54379448)
chr3 (247-297)||(9557850-9557900)
chr3 (239-297)||(25559799-25559857)
chr3 (235-305)||(27162377-27162447)
chr3 (229-300)||(30400071-30400144)
chr3 (224-270)||(30664581-30664627)
chr3 (240-270)||(32151989-32152019)
chr3 (239-297)||(32931836-32931894)
chr3 (239-297)||(43149261-43149319)
chr3 (234-292)||(55264907-55264965)
chr3 (239-300)||(23906902-23906963)
chr3 (229-286)||(1261304-1261363)
chr3 (239-291)||(2280272-2280324)
chr3 (229-286)||(7949871-7949930)
chr3 (246-286)||(9582088-9582128)
chr3 (235-271)||(12094334-12094370)
chr3 (243-299)||(12762859-12762915)
chr3 (229-286)||(20714326-20714385)
chr3 (229-298)||(28269889-28269960)
chr3 (229-286)||(30633743-30633802)
chr3 (239-327)||(31300897-31300985)
chr3 (243-283)||(36301140-36301180)
chr3 (229-298)||(37215148-37215219)
chr3 (241-273)||(38017862-38017894)
chr3 (241-269)||(46323061-46323089)
[»] chr2 (51 HSPs)
chr2 (235-330)||(33722043-33722138)
chr2 (239-297)||(35518370-35518428)
chr2 (235-322)||(20533956-20534043)
chr2 (229-297)||(24491595-24491665)
chr2 (239-306)||(29871264-29871331)
chr2 (239-306)||(33857312-33857379)
chr2 (229-305)||(44484566-44484644)
chr2 (239-305)||(4432422-4432488)
chr2 (239-297)||(43026031-43026089)
chr2 (239-300)||(27307160-27307221)
chr2 (229-306)||(3299014-3299093)
chr2 (229-286)||(19631471-19631530)
chr2 (229-286)||(19828372-19828431)
chr2 (235-291)||(34373099-34373155)
chr2 (229-286)||(36909772-36909831)
chr2 (229-273)||(37109314-37109358)
chr2 (241-327)||(14957689-14957776)
chr2 (235-294)||(25997651-25997710)
chr2 (224-299)||(32755758-32755833)
chr2 (270-328)||(9458521-9458579)
chr2 (235-297)||(16463383-16463445)
chr2 (229-300)||(29168808-29168881)
chr2 (239-305)||(37966451-37966517)
chr2 (239-300)||(23047998-23048059)
chr2 (241-305)||(6885007-6885071)
chr2 (239-291)||(25094447-25094499)
chr2 (239-327)||(38689004-38689092)
chr2 (245-297)||(40721872-40721924)
chr2 (229-297)||(8757627-8757697)
chr2 (229-297)||(13711144-13711214)
chr2 (243-286)||(29582309-29582352)
chr2 (229-297)||(36383545-36383615)
chr2 (239-330)||(43791676-43791767)
chr2 (239-297)||(11164294-11164352)
chr2 (239-297)||(26273269-26273327)
chr2 (234-272)||(31629694-31629732)
chr2 (239-297)||(34141538-34141596)
chr2 (235-321)||(38464504-38464589)
chr2 (239-297)||(39285948-39286006)
chr2 (240-297)||(13881191-13881248)
chr2 (240-297)||(14021316-14021373)
chr2 (228-273)||(15019112-15019157)
chr2 (224-286)||(39133800-39133864)
chr2 (239-283)||(5962733-5962777)
chr2 (239-299)||(7497907-7497967)
chr2 (239-291)||(9377682-9377734)
chr2 (235-307)||(12175236-12175308)
chr2 (235-271)||(14151706-14151742)
chr2 (229-286)||(19913867-19913926)
chr2 (237-273)||(30487394-30487430)
chr2 (239-295)||(38598269-38598325)
[»] chr5 (52 HSPs)
chr5 (227-292)||(35616724-35616789)
chr5 (245-300)||(15917941-15917996)
chr5 (235-297)||(125183-125245)
chr5 (235-297)||(11306787-11306849)
chr5 (241-305)||(12401289-12401353)
chr5 (239-330)||(3154528-3154619)
chr5 (219-295)||(33243661-33243739)
chr5 (239-297)||(5005208-5005266)
chr5 (229-300)||(8959243-8959316)
chr5 (229-300)||(9594561-9594634)
chr5 (229-300)||(15622127-15622200)
chr5 (229-300)||(30574292-30574365)
chr5 (239-297)||(31625994-31626052)
chr5 (229-300)||(33823609-33823682)
chr5 (239-328)||(9240214-9240303)
chr5 (234-327)||(22402727-22402819)
chr5 (239-304)||(28501712-28501777)
chr5 (239-300)||(36786173-36786234)
chr5 (236-297)||(37821059-37821120)
chr5 (239-331)||(1760456-1760548)
chr5 (229-286)||(2051009-2051068)
chr5 (234-270)||(14126504-14126540)
chr5 (229-286)||(14914453-14914512)
chr5 (219-297)||(31284312-31284394)
chr5 (229-305)||(7077249-7077327)
chr5 (239-298)||(12417721-12417780)
chr5 (239-285)||(1108093-1108139)
chr5 (229-300)||(3263423-3263496)
chr5 (239-297)||(3518278-3518336)
chr5 (239-273)||(4985458-4985492)
chr5 (229-300)||(9596729-9596802)
chr5 (235-297)||(12203236-12203298)
chr5 (229-300)||(12512876-12512949)
chr5 (239-297)||(12612935-12612993)
chr5 (229-300)||(17489431-17489504)
chr5 (229-300)||(19271942-19272015)
chr5 (239-324)||(31627034-31627120)
chr5 (239-297)||(35358853-35358911)
chr5 (235-297)||(38919937-38919999)
chr5 (239-273)||(41210456-41210490)
chr5 (235-272)||(6515381-6515418)
chr5 (236-293)||(22653731-22653788)
chr5 (239-300)||(22920407-22920468)
chr5 (229-279)||(25345421-25345473)
chr5 (224-286)||(43152989-43153053)
chr5 (241-273)||(4820252-4820284)
chr5 (234-270)||(5740436-5740472)
chr5 (229-330)||(8955543-8955646)
chr5 (246-286)||(9599685-9599725)
chr5 (239-291)||(10469871-10469923)
chr5 (229-297)||(28041976-28042044)
chr5 (234-270)||(39032549-39032585)
[»] chr4 (45 HSPs)
chr4 (239-327)||(46844129-46844217)
chr4 (239-286)||(22071593-22071640)
chr4 (229-300)||(8026679-8026752)
chr4 (240-286)||(31318844-31318890)
chr4 (229-300)||(36728537-36728610)
chr4 (229-297)||(4949152-4949222)
chr4 (224-300)||(15638208-15638286)
chr4 (229-305)||(24235403-24235481)
chr4 (229-305)||(44368112-44368190)
chr4 (229-305)||(49424730-49424808)
chr4 (239-329)||(3475963-3476053)
chr4 (229-300)||(5208242-5208315)
chr4 (237-291)||(19314999-19315053)
chr4 (229-300)||(27001324-27001397)
chr4 (229-300)||(47105994-47106067)
chr4 (229-283)||(13267410-13267466)
chr4 (229-299)||(51377209-51377281)
chr4 (233-273)||(13182420-13182460)
chr4 (239-295)||(21766642-21766698)
chr4 (229-286)||(29949602-29949661)
chr4 (229-286)||(41495096-41495155)
chr4 (241-285)||(42177980-42178024)
chr4 (229-330)||(42915105-42915207)
chr4 (224-300)||(7037399-7037477)
chr4 (259-330)||(51691555-51691626)
chr4 (229-300)||(3223072-3223145)
chr4 (239-329)||(6126948-6127038)
chr4 (239-273)||(6686141-6686175)
chr4 (229-300)||(20632563-20632636)
chr4 (229-300)||(25936323-25936396)
chr4 (243-297)||(30250216-30250270)
chr4 (235-305)||(30866441-30866511)
chr4 (239-297)||(36081906-36081964)
chr4 (239-297)||(50291377-50291435)
chr4 (239-305)||(56025351-56025417)
chr4 (228-273)||(20056466-20056511)
chr4 (224-273)||(30973664-30973713)
chr4 (239-300)||(33484021-33484082)
chr4 (224-304)||(40258283-40258361)
chr4 (232-273)||(2193751-2193794)
chr4 (231-300)||(18568730-18568801)
chr4 (241-297)||(18944382-18944438)
chr4 (245-285)||(37732050-37732090)
chr4 (239-271)||(43307308-43307340)
chr4 (229-273)||(51318786-51318830)
[»] chr6 (22 HSPs)
chr6 (239-306)||(237307-237374)
chr6 (229-305)||(17835695-17835773)
chr6 (239-305)||(2881428-2881494)
chr6 (224-300)||(6435114-6435192)
chr6 (224-300)||(12441605-12441683)
chr6 (225-305)||(15328568-15328650)
chr6 (239-297)||(7304023-7304081)
chr6 (239-300)||(1803964-1804025)
chr6 (229-286)||(21210339-21210398)
chr6 (225-305)||(4923025-4923107)
chr6 (229-305)||(15364742-15364820)
chr6 (229-305)||(25924774-25924852)
chr6 (239-305)||(2862167-2862233)
chr6 (239-305)||(3339409-3339475)
chr6 (239-285)||(12151787-12151833)
chr6 (239-297)||(17442917-17442975)
chr6 (239-329)||(22422245-22422335)
chr6 (239-329)||(24881664-24881754)
chr6 (229-286)||(31480765-31480822)
chr6 (229-328)||(3401165-3401263)
chr6 (235-300)||(3660268-3660335)
chr6 (229-282)||(12501557-12501612)
[»] scaffold0651 (1 HSPs)
scaffold0651 (240-286)||(4780-4826)
[»] scaffold0193 (1 HSPs)
scaffold0193 (239-286)||(24768-24815)
[»] scaffold0514 (1 HSPs)
scaffold0514 (229-300)||(1411-1484)
[»] scaffold0172 (1 HSPs)
scaffold0172 (239-305)||(17070-17136)
[»] scaffold0002 (1 HSPs)
scaffold0002 (229-300)||(147171-147244)
[»] scaffold0014 (2 HSPs)
scaffold0014 (242-330)||(198317-198405)
scaffold0014 (239-297)||(145142-145200)
[»] scaffold0576 (1 HSPs)
scaffold0576 (229-305)||(9513-9591)
[»] scaffold0058 (1 HSPs)
scaffold0058 (229-297)||(3026-3096)
[»] scaffold0054 (1 HSPs)
scaffold0054 (229-297)||(31518-31588)
[»] scaffold0260 (1 HSPs)
scaffold0260 (234-300)||(21378-21444)
[»] scaffold0046 (1 HSPs)
scaffold0046 (235-273)||(88270-88308)
[»] scaffold0016 (1 HSPs)
scaffold0016 (242-299)||(204363-204420)
[»] scaffold0004 (1 HSPs)
scaffold0004 (239-300)||(249057-249118)
[»] scaffold0295 (2 HSPs)
scaffold0295 (239-271)||(3602-3634)
scaffold0295 (239-271)||(6087-6119)
[»] scaffold0060 (1 HSPs)
scaffold0060 (229-297)||(6900-6970)


Alignment Details
Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 7420724 - 7420819
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    |||| ||||||||||||| || ||||||||||| ||||||||| |||||||||  |||||||||||  |||||||| |  ||||||||||||||||    
T  7420724 ctttctctctctattgttcttgaccaataagaaaagagaagaaaaaagttgtcctaaaagttgtcacgaaataattgtacaaatatcattactctt 7420819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 51436406 - 51436352
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagt 294  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||| |||||||    
T  51436406 ctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaagt 51436352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 327
Target Start/End: Original strand, 18610860 - 18610952
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    ||||||||||||||||||||| |||||||| ||||||| | |  ||||||||| ||||||||||| |||| ||||| |  |||||||| |||||    
T  18610860 ctttttctctctattgtttttgaccaataaaaagagaggaaaggaaagttgtcacaaaagttgtc-ttaattaattgttcaaatatcactactc 18610952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 37741927 - 37741870
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||| ||||| ||||    
T  37741927 ctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaaattgt 37741870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 50777399 - 50777338
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    ||||||||||||||||||||||||||||||||||| || || |||||| | ||| |||||||    
T  50777399 tctctctattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcat 50777338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 19920852 - 19920923
Alignment:
Q  236 ttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    ||||||||||  ||||||||| |||||||||||||||||| || ||||||||| | ||||||||| ||||||    
T  19920852 ttttctctcttcattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaat 19920923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 29094734 - 29094666
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| |||||||||||||||| |||| |||||||||||||||  | ||||| |||||| ||||||||||    
T  29094734 tctttctttttctctctattgattttgaccaataagaagagaacacaataaggttgtcccaaaagttgt 29094666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 6396410 - 6396480
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||  |||||||||||||||||| ||||||||||| || ||||||||| |||| |||||    
T  6396410 tcttcctttttctctttctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaatgttgt 6396480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 27895726 - 27895671
Alignment:
Q  250 tttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||||||||||| || ||||||||| | ||||||||| ||||||    
T  27895726 tttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaat 27895671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 43757671 - 43757734
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaa 292  Q
    |||| ||||||||| |||||||||||||||||| | ||||||||| || ||||||||| |||||    
T  43757671 tctttctttttctccctattgtttttaaccaatgaaaagagagaacaacaaagttgtctcaaaa 43757734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 48390069 - 48390026
Alignment:
Q  225 tctttcttactttttctctctattgtttttaaccaataagaaga 268  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  48390069 tctttctttctttttctctctattgtttttaaccaataaaaaga 48390026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 50035514 - 50035447
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||||||| ||||| |||||||| || |||||| |||||||||||| | ||||||||||| |||||    
T  50035514 tctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgtcatgaaata 50035447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 644791 - 644849
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| || ||| ||||||||||| |||||||||||| |||| |||||    
T  644791 tctctctattgtttttgactaatgagaagagagaacaataaagttgtctcaaatgttgt 644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 2827686 - 2827628
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||||||||||||| || ||| ||||| |||| |||||    
T  2827686 tctctctattgtttttgaccaataagaagagagaacaacaaaattgtctcaaaggttgt 2827628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 27787584 - 27787642
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| || ||| ||||||||||| || ||||||||| ||||||||||    
T  27787584 tctctctattgtttttgacaaatgagaagagagaacaacaaagttgtctcaaaagttgt 27787642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 46903565 - 46903623
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||| ||||||||||| || ||||||||| |||| |||||    
T  46903565 tctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 46903623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 29362685 - 29362621
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| |||| ||||||||||||  ||||||||| |||||||||||||||||| || |||||||||    
T  29362685 ttctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 29362621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 25130805 - 25130865
Alignment:
Q  246 attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    ||||||||| |||||||||||||||||| || || |||||| | ||||||||||| |||||    
T  25130805 attgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaata 25130865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 25302641 - 25302574
Alignment:
Q  221 ttattctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    ||||||| |||| ||||||||||||  |||||||||||||||| | ||||||||| || |||||||||    
T  25302641 ttattctctcttcctttttctctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtc 25302574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 25995543 - 25995622
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||| ||||||||||||  ||||||||| |||||||| ||||||||| ||||| ||||||   ||||||||||| |||||    
T  25995543 tcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgtcatgaaata 25995622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 41558088 - 41558148
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    |||||||||||||||| ||||||||||||| |||| |  ||||||||| ||| ||||||||    
T  41558088 tctctctattgtttttgaccaataagaagaaagaaaaggaaagttgtcacaatagttgtca 41558148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 3608014 - 3607963
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||| ||| ||||| |||||||| ||||||||| ||||||||||||    
T  3608014 tttttctctccattatttttgaccaataaaaagagagaacaataaagttgtc 3607963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 13813641 - 13813711
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | ||||||||    
T  13813641 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 13813711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 23472186 - 23472233
Alignment:
Q  224 ttctttcttactttttctctctattgtttttaaccaataagaagagag 271  Q
    |||| ||||||||||||||| |||||||| |||||||||| |||||||    
T  23472186 ttctctcttactttttctctttattgtttctaaccaataacaagagag 23472233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 29489335 - 29489268
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||| ||||||||| ||||||||||||| |||| || || |||||| | ||||||||||| |||||    
T  29489335 tctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtcatgaaata 29489268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 37947208 - 37947138
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  ||||||||| |||||| ||||||||||| || || |||||| ||||||||||    
T  37947208 tcttcctttttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 37947138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 302
Target Start/End: Original strand, 39669901 - 39669964
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcatta 302  Q
    |||||| |||||||| ||||||||| || |||||| ||||||||||||   |||||||||||||    
T  39669901 tctctccattgttttcaaccaataaaaatagagaaaaataaagttgtcatcaaagttgtcatta 39669964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 48028621 - 48028709
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttg-tcattaaataattatgtaaatatcattactct 328  Q
    |||||| |||||||||||||||| ||||||||||| || ||||||||  ||||| ||| |||  |||||||| |  |||||||||||||||    
T  48028621 tctctccattgtttttaaccaatgagaagagagaacaacaaagttgtaccaaaaattgatca--aaataattgttcaaatatcattactct 48028709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 3919389 - 3919451
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||| |||||||||||||| |||||| |||  |||||| |||||||||||| ||||| ||||    
T  3919389 tttttttctctattgtttttgaccaatgagagaagagaataataaagttgtcccaaaaattgt 3919451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 21446190 - 21446136
Alignment:
Q  243 tctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||||| ||||||||||  || ||||||||| |||| |||||    
T  21446190 tctattgtttttaaccaatgagaagagagatcaacaaagttgtctcaaaggttgt 21446136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 24158745 - 24158803
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||| |||||||||| ||||||||||||| |||| || ||||||||| |||| |||||    
T  24158745 tctctttattgttttttaccaataagaagacagaacaacaaagttgtctcaaaggttgt 24158803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 32873436 - 32873470
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||||||||||||| ||||||||||||||||||    
T  32873436 tctctctattgttttttaccaataagaagagagaa 32873470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 34941896 - 34941838
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||||| |||||||||||||||||  ||| ||||||||  |||||||||    
T  34941896 tctctccattgtttttgaccaataagaagagagagaaatgaagttgtcataaaagttgt 34941838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 36669358 - 36669285
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||| ||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  36669358 tcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 36669285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 42829284 - 42829250
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||||||||||||| ||||||||||||||||||    
T  42829284 tctctctattgttttttaccaataagaagagagaa 42829250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 286
Target Start/End: Complemental strand, 42843330 - 42843273
Alignment:
Q  231 ttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||  ||||||||| |||||||||||||||||| || || ||||||    
T  42843330 ttactttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtc 42843273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 43105200 - 43105258
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||| ||||| |||||||| ||||||||| |||||||||||| ||||| ||||    
T  43105200 tctctccattatttttgaccaataaaaagagagaacaataaagttgtcccaaaaattgt 43105258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 51168744 - 51168686
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||||||||||||||||| |||||| || ||| |||||  |||||||||    
T  51168744 tctctccattgtttttaaccaataagaaaagagaaaaaaaaaattgtcataaaagttgt 51168686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 6829761 - 6829700
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||| ||||| |||||||||||||||||| || ||  ||||| | |||||||||||    
T  6829761 tctctctattatttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcat 6829700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 7371924 - 7371863
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| || |||||| ||   |||||||||||    
T  7371924 tctctccattgtttttgaccaataagaagagagaaaaacaaagttatcagtaaagttgtcat 7371863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 25239216 - 25239179
Alignment:
Q  236 ttttctctctattgtttttaaccaataagaagagagaa 273  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  25239216 ttttctctccattgtttttgaccaataagaagagagaa 25239179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 26501390 - 26501451
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| || || ||||||   |||||||||||    
T  26501390 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtcat 26501451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 36930742 - 36930685
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||| ||||||||| |||||||| ||||||||| || || ||||||    
T  36930742 tcttcctttttctctccattgtttttgaccaataaaaagagagaaaaagaaggttgtc 36930685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 37620073 - 37619984
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcatta 324  Q
    |||| |||||| || ||||| | |||||| ||| ||||| || || |||||| |||||||| |||| |||| ||| ||||||||||||||    
T  37620073 ttttcctctctgttctttttgatcaataaaaagtgagaataaaaaggttgtcccaaaagttatcataaaatgattgtgtaaatatcatta 37619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 9882639 - 9882555
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcatta 324  Q
    |||| |||||||||| |||||||| | || |||| || ||| ||| ||||||||||||||  |||||||| |  |||||||||||    
T  9882639 ctctttattgtttttgaccaataaaacgaaagaaaaagaaatttgccgcaaaagttgtcaccaaataattgtacaaatatcatta 9882555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 19651493 - 19651537
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||| ||||||||||| ||||||||| |||||||| |||||||||    
T  19651493 tcttcctttttctctccattgtttttgaccaataaaaagagagaa 19651537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 39010897 - 39010968
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||| ||||||||||||  ||||||||| |||||| | ||||||||| ||  |||||||| |||||||||||    
T  39010897 tcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtc 39010968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 40052997 - 40053053
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||||||||||| ||||| |||||| | ||||||||| || ||||||||| ||||    
T  40052997 tttttctctctattatttttgaccaatgaaaagagagaacaacaaagttgtctcaaa 40053053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 43196077 - 43195998
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||| ||||||||||||  ||||||||| |||||| | ||||||||| |  |||||| || | |||||||||||||||||    
T  43196077 tcttcctttttctctctccattgtttttgaccaatcaaaagagagaacatcaaagttatcaccaaagttgtcattaaata 43195998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 50775179 - 50775231
Alignment:
Q  278 aaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    ||||||||| ||||| ||||||  |||||||| | ||||||||||||||||||    
T  50775179 aaagttgtcacaaaaattgtcaaaaaataattgtataaatatcattactcttt 50775231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 33511698 - 33511786
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    |||||||||||||| ||||||||||||||||||||| || |||||| |||||||| |||  ||||| || |  ||||||||||||||||    
T  33511698 tctctattgtttttgaccaataagaagagagaagaagaatgttgtcccaaaagttttcacaaaatagttgtacaaatatcattactctt 33511786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 34970290 - 34970366
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| || ||||||||  | ||||||||| ||||||    
T  34970290 tcttcctttttctctccattgtttttaaccaataagaagagagaaaaacaaagttgttactaaagttgtccttaaat 34970366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 6825253 - 6825186
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| | | |||||||||| ||||||    
T  6825253 tctctccattgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgtcaataaata 6825186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 8428957 - 8429004
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaa 276  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||    
T  8428957 tctttctttttctctctattgtttttaaacaataagaagagagaagaa 8429004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 8143000 - 8142903
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    |||| ||||||||||||||| ||| |||||||||||| ||||||| |  || |||||| ||||||||||||| |||||||| |  ||||||||| ||||    
T  8143000 tctttctttttctctctatt-tttgtaaccaataagaggagagaaaaggaaggttgtcacaaaagttgtcatcaaataattgttcaaatatcatcactc 8142903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 36675420 - 36675510
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    |||||||||||||||| |||||||| |||| |||| || |||||| || ||| ||||||||| |||| ||| |  ||||||||||||||||    
T  36675420 tctctctattgtttttgaccaataacaagaaagaacaacaaagttatcccaagagttgtcatgaaatgattgttcaaatatcattactctt 36675510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 42651015 - 42651073
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||||||||| ||||||||||| || || |||||| ||||||||||    
T  42651015 tctctctattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgt 42651073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 8074705 - 8074641
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    ||||||||||||||||||| ||||||||||||||||||| |  |||||||||   ||||||||||    
T  8074705 tttttctctctattgttttgaaccaataagaagagagaaaatgaaagttgtcatcaaagttgtca 8074641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 40211735 - 40211680
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagt 282  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| || |||||    
T  40211735 tcttactttttctctctccattgtttttaaccaataagaagagagaaaaacaaagt 40211680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 30927919 - 30927841
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | ||||||||||| ||||    
T  30927919 tctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaat 30927841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 2597148 - 2597075
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  2597148 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcat 2597075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 4265604 - 4265534
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||||||| |||||| | ||| ||||  |||||| ||||| ||||||||||||| ||||    
T  4265604 tttttctctctattgtttttgaccaatcaaaagcgagagaaataaaattgtcacaaaagttgtcatcaaat 4265534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 7900380 - 7900446
Alignment:
Q  235 tttttctctctattgtttttaaccaat-aagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||||||| |||||| |||| ||||||| |||||||||||  ||||||| |||||    
T  7900380 tttttctctctattgttttttaccaataaagaggagagaaaaataaagttgtttcaaaagtcgtcat 7900446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 21273686 - 21273628
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||||||||| | ||||||||| |  ||||||||| ||||||||||    
T  21273686 tctctctattgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgt 21273628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 24503009 - 24503071
Alignment:
Q  236 ttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    ||||||||||||||||||| |||||| | ||||||||| ||| ||||||||  ||||||||||    
T  24503009 ttttctctctattgtttttgaccaatgaaaagagagaaaaatgaagttgtcataaaagttgtc 24503071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 43605645 - 43605555
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    |||||||||||||||| |||||||||||||||||| |   | |||||| |||||||||||| ||||   || |  ||||||||||||||||    
T  43605645 tctctctattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactctt 43605555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 45405811 - 45405753
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||||| |||| |||||    
T  45405811 tctctttattgtttttgaccaatgagaagagagaacaataaagttgtctcaaaggttgt 45405753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 3394690 - 3394622
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagtt 295  Q
    |||| ||||||||||||  ||| ||||||| |||| ||||||||||| |||||||||||| ||||||||    
T  3394690 tctttctttttctctctccattatttttaatcaatgagaagagagaacaataaagttgtcccaaaagtt 3394622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 7678823 - 7678914
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    |||||||||| |||||||||||||||| | ||||||||| ||  |||||||  |||||||||| || ||||| || |  ||||||||||||||    
T  7678823 tttttctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgttacaaaagttgt-atcaaatagttgttcaaatatcattactc 7678914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 20995034 - 20994974
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    |||||||||||||||| |||||||||||||||||| |   | |||||| ||||||||||||    
T  20995034 tctctctattgtttttgaccaataagaagagagaaaaggtaggttgtcacaaaagttgtca 20994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 22767205 - 22767284
Alignment:
Q  221 ttattctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    ||||||| |||| ||||||||||||  ||||||||| |||||| | ||||||||| ||  |||||||| |||||||||||    
T  22767205 ttattctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtc 22767284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 28772384 - 28772447
Alignment:
Q  225 tctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||||||  ||||||||| |||||||| || | |||| ||||||||||||    
T  28772384 tctttcttactttttctctctccattgttttttaccaataaaaaaaaagaaaaataaagttgtc 28772447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 36497739 - 36497790
Alignment:
Q  224 ttctttcttactttttctc--tctattgtttttaaccaataagaagagagaa 273  Q
    |||| ||||||||||||||  ||||||||||||||||||||| |||||||||    
T  36497739 ttctctcttactttttctctctctattgtttttaaccaataaaaagagagaa 36497790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 43587724 - 43587827
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattact 326  Q
    |||| ||||||||||||  |||| |||| |||||| | ||||||||| || ||||||||| | ||||||||||||||||   |||  |||||||||| ||    
T  43587724 tcttcctttttctctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatggatatacaaatatcattgct 43587823  T
Q  327 cttt 330  Q
    ||||    
T  43587824 cttt 43587827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 154385 - 154444
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||||||||||||||| |||||||| ||||||||| |  ||||||||| ||| |||||||    
T  154385 tctctctattgtttttgaccaataaaaagagagaaaatgaaagttgtcacaatagttgtc 154444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 22999523 - 22999464
Alignment:
Q  243 tctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcatta 302  Q
    |||||| |||||||||||||  ||||||||| || || |||||| |||||||||||||||    
T  22999523 tctattatttttaaccaatacaaagagagaaaaagaaggttgtcacaaaagttgtcatta 22999464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 32185642 - 32185595
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||| ||||||||| |||||||||||||||||| || |||||||||    
T  32185642 tctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 32185595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 5924905 - 5924971
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||| ||| ||||| |||||||||||||||||| ||||| ||||||   ||||||||||| ||||    
T  5924905 tctctccattatttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaat 5924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 5925150 - 5925216
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||| ||| ||||| ||||||||||| |||||| ||||| ||||||  |||||||||||| ||||    
T  5925150 tctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaat 5925216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 6105415 - 6105345
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||  ||||||||| |||||| | ||||||| | |||||||||||| | ||||||||| ||||||    
T  6105415 tttttctctacattgtttttgaccaatcaaaagagaggaaaataaagttgtcactaaagttgtctttaaat 6105345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 13884399 - 13884472
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| | |||||||||||||||| || ||| ||||| | |||||||||||    
T  13884399 tcttcctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaagttgtcat 13884472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 13924100 - 13924162
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||| ||||||||||| ||||||||| | || ||  ||||| ||||||||||    
T  13924100 tttttctctctattggttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgt 13924162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 19723194 - 19723121
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| || ||||||||||||||| || || |||||| | |||||||||||    
T  19723194 tcttcctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgtcat 19723121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 328
Target Start/End: Complemental strand, 23265322 - 23265240
Alignment:
Q  246 attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactct 328  Q
    ||||||||| |||||||| ||||||| | || ||| |||||||||||||||| |  ||| | || | ||||||||||||||||    
T  23265322 attgtttttgaccaataaaaagagagcacaacaaaattgtcgcaaaagttgtaacaaaaaagttgtttaaatatcattactct 23265240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 25430741 - 25430799
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||||||||||  | || || |||||| ||||||||||    
T  25430741 tctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 25430799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 270
Target Start/End: Complemental strand, 35701822 - 35701788
Alignment:
Q  236 ttttctctctattgtttttaaccaataagaagaga 270  Q
    ||||||||||||||||||| |||||||||||||||    
T  35701822 ttttctctctattgtttttgaccaataagaagaga 35701788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 41273598 - 41273671
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||  | |||||||||||    
T  41273598 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcat 41273671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 14233613 - 14233564
Alignment:
Q  246 attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagtt 295  Q
    ||||||||| |||||| ||||||||||| || ||||||||| ||||||||    
T  14233613 attgttttttaccaatgagaagagagaacaacaaagttgtcacaaaagtt 14233564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Original strand, 33944850 - 33944943
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactct 328  Q
    |||||||||| ||||||||| | ||||||||||| |||| |  || || |||  |||| ||||||| ||||| || | ||||||||||||||||    
T  33944850 tttttctctccattgtttttgatcaataagaagacagaaaagaaatgtcgtcataaaaattgtcatcaaatagttgtataaatatcattactct 33944943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 41293697 - 41293637
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| ||  |||||||| | |||||||||||    
T  41293697 tctctccattgtttttgaccaataagaagagagaa-aaacaagttgtcactaaagttgtcat 41293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 5359416 - 5359467
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaa 273  Q
    |||| |||||||||||||||||  ||||||||| |||||||| |||||||||    
T  5359416 ttctctcttactttttctctctccattgtttttgaccaataaaaagagagaa 5359467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 5742633 - 5742581
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||| ||||||||| |||||| ||||||||||| || ||||||||| ||||    
T  5742633 tctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 5742581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 11138981 - 11139052
Alignment:
Q  231 ttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||  ||| ||||| |||||||| |||| |||| || ||||||||| | |||||||||||    
T  11138981 ttactttttctctcttcattatttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgtcat 11139052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 21649156 - 21649088
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||| ||| ||||| |||||||| ||||||| | || || |||||| ||||||||||    
T  21649156 tcttcctttttctctccattatttttgaccaataaaaagagagcacaacaaggttgtcccaaaagttgt 21649088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 29910188 - 29910128
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    ||||||||||||||| ||||||| ||||||||||| |  |||||||||   ||||||||||    
T  29910188 tctctctattgttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgtca 29910128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 33635670 - 33635714
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagtt 283  Q
    ||||||||||| |||| |||||| ||||||||||| |||||||||    
T  33635670 tctctctattggttttgaccaatgagaagagagaacaataaagtt 33635714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 34247857 - 34247928
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||| ||||||||||  ||||||||||| |||||| | ||||||||| || || |||||| |||||||||||    
T  34247857 tcttcctttttctctttctattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaagttgtc 34247928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 43602393 - 43602333
Alignment:
Q  245 tattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||| |||||| | ||||||||  || ||||||||| | ||||||||||||||||    
T  43602393 tattgtttttgaccaatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaat 43602333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 32315921 - 32316008
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattact 326  Q
    |||||||||||||||| |||||||||||||||||| || || |||||| ||||||||||| | ||||| || |  |||||||||||||    
T  32315921 tctctctattgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 26041401 - 26041471
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||| ||||||||| |||||||||||||||||| || ||||||||| | ||||||||||| ||||    
T  26041401 tttttctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaat 26041471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 47379655 - 47379712
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttg 296  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||| |||||||||    
T  47379655 tctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaagttg 47379712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 28548211 - 28548159
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  28548211 tctctctattctttttaaccaataagaagagagaacaataaagttgtctcaaa 28548159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 39369385 - 39369463
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||||||||||||||| |||||| || ||||||||| | ||||||||| ||||||    
T  39369385 tcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagttgtccttaaat 39369463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 2005802 - 2005871
Alignment:
Q  219 ttttattctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    ||||||||| ||||  |||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  2005802 ttttattctctcttcttttttctctctgcattgtttttaaccaataagaagagagaaaaacaaagttgtc 2005871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 384643 - 384704
Alignment:
Q  236 ttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||| |||||||||||| ||||||||||| || ||||||||| |||| |||||    
T  384643 ttttctctctattttttttaaccaatgagaagagagaataacaaagttgtctcaaaggttgt 384704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 37385219 - 37385148
Alignment:
Q  231 ttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||  ||||||||| ||||||||||| ||||||||| || |||||| | |||||||||||    
T  37385219 ttactttttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgtcat 37385148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 42118671 - 42118620
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaa 292  Q
    |||||||||||||| ||||||||||||||||||||| || |||||| |||||    
T  42118671 tctctattgtttttgaccaataagaagagagaagaagaaggttgtcacaaaa 42118620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 7458172 - 7458258
Alignment:
Q  237 tttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcatt 323  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||  ||||  ||||| ||||||  |||||||| |  ||||||||||    
T  7458172 tttctctctattattttttaccaataagaagagagaagaagaacattgtttcaaaaattgtcacaaaataattgtacaaatatcatt 7458258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 33050278 - 33050344
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||| |||||||||||||||||  || || |||||| | ||||||||||| ||||    
T  33050278 tctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaat 33050344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 37970028 - 37970086
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||| ||||||||||| || ||||||||| |||| |||||    
T  37970028 tctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaatgttgt 37970086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 42431806 - 42431879
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  42431806 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 42431879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 44185271 - 44185329
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||| ||||||||||| ||| | |||||| ||||||||||    
T  44185271 tctctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgt 44185329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 324
Target Start/End: Original strand, 31467703 - 31467784
Alignment:
Q  243 tctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcatta 324  Q
    |||||||||||||||||||||||| |||||| |  |||||| || ||||||||||||| |||  ||| |  |||||||||||    
T  31467703 tctattgtttttaaccaataagaaaagagaaaatgaaagttatcacaaaagttgtcatcaaacgattgtacaaatatcatta 31467784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 35212955 - 35212887
Alignment:
Q  219 ttttattctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgt 285  Q
    ||||||||| |||| ||||||||||||  ||| |||||||||||| ||||||||||| || ||||||||    
T  35212955 ttttattctctcttcctttttctctctctattatttttaaccaatgagaagagagaacaacaaagttgt 35212887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 35590771 - 35590710
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    ||||||||||||||||||||||||| |||| |||| || || |||||| ||||| |||||||    
T  35590771 tctctctattgtttttaaccaataataagaaagaacaacaaggttgtcccaaaaattgtcat 35590710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 48383308 - 48383243
Alignment:
Q  227 tttcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaa 292  Q
    |||||| ||||||||||||||| || || ||||||||||||||| || |||||| ||||| |||||    
T  48383308 tttctttctttttctctctattattattgaccaataagaagagaaaataataaaattgtcccaaaa 48383243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 11070323 - 11070375
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||||||||||||| |||||| | |||||||||||| ||||||||| ||||    
T  11070323 tctctctattgtttttgaccaatgaaaagagagaagaacaaagttgtctcaaa 11070375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 12102697 - 12102626
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||| ||||||||||||  |||||||||||||||| | ||||||||| ||  |||||||| |||||||||||    
T  12102697 tcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtc 12102626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 25614807 - 25614736
Alignment:
Q  231 ttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | ||| |||||||    
T  25614807 ttactttttctctctccattgttttttaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcat 25614736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 7295562 - 7295621
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||||||||||||||| |||||| ||||||||||| || || |||||  |||||||||||    
T  7295562 tctctctattgtttttgaccaatgagaagagagaataacaaggttgttccaaaagttgtc 7295621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 32044863 - 32044941
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||| ||  |||||||||||| ||||||||||||||  || ||| ||||| | ||||||||| ||||||    
T  32044863 tcttactttttctcccttcattgtttttaactaataagaagagagataaacaaaattgtcactaaagttgtccttaaat 32044941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 37149451 - 37149392
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||||||||||||||| ||||||||||||| |||| || || ||||||  ||||||||||    
T  37149451 tctctctattgttttttaccaataagaagaaagaaaaacaaggttgtcataaaagttgtc 37149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 42060748 - 42060819
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||||||| ||||||||| |||||| | |||||||||    ||||||||| | |||||||||||||||||    
T  42060748 tttttctctccattgtttttgaccaatcaaaagagagaaaggcaaagttgtcaccaaagttgtcattaaata 42060819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 47530271 - 47530200
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||||||| |||||||||| |||||||||||| |||| || || ||| || | ||||||||||| |||||    
T  47530271 tttttctctccattgtttttagccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatgaaata 47530200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 2323388 - 2323454
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||| |||||| | |||| |||| |||||| || || |||| |||||||||||||    
T  2323388 tctctctattgtttttgaccaatgaaaagaaagaaaaataaaattctcacaaatgttgtcattaaat 2323454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 2600510 - 2600452
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||||| |||||| ||||||||||| || ||||||||| |||| |||||    
T  2600510 tctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 2600452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 7410560 - 7410495
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||| ||| ||||||||||| || |||||| ||||| |||||||| |||| ||||    
T  7410560 tctctctattgtttttgaccgataagaagaga-aaaaataaaattgtcacaaaagttatcatcaaat 7410495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 17157224 - 17157294
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||| ||||||||| |||||| | ||||||||| |  |||||| || | ||||||||||||||||    
T  17157224 tttttctctccattgtttttgaccaatcaaaagagagaaaagcaaagttatcaccaaagttgtcattaaat 17157294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 23034289 - 23034231
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| ||||||||||| |||| | || || |||||| ||||||||||    
T  23034289 tctctctattgtttttgaccaataagaaaagagcacaacaaggttgtcccaaaagttgt 23034231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 27164806 - 27164752
Alignment:
Q  246 attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    ||||||||| |||||||||||||||||| || ||||||||| | ||| |||||||    
T  27164806 attgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcat 27164752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 27704530 - 27704588
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||| |||||||||||||||  | || ||||||||| ||||||||||    
T  27704530 tctcgctattgtttttgaccaataagaagagaacacaacaaagttgtcccaaaagttgt 27704588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 30864405 - 30864332
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| ||||||||||| |||||| || || |||||| | |||||||||||    
T  30864405 tcttcctttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcat 30864332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 38978575 - 38978648
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| || ||||||||||||||| || || |||||| | |||||||||||    
T  38978575 tcttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgtcat 38978648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 44511230 - 44511300
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||| | ||||||||| ||||||||||| |||||| || ||| ||||| | ||||||||||| ||||    
T  44511230 tttttctccccattgtttttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaat 44511300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 640463 - 640539
Alignment:
Q  219 ttttattctttct-tac-tttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    ||||||||||||| ||| |||||||||||  ||||||||| |||||| ||||||||||| || ||||||||| ||||    
T  640463 ttttattctttctctacatttttctctctcaattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 640539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 10014931 - 10014870
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||| ||||||||| || ||| ||||| | |||||||||||    
T  10014931 tctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcat 10014870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 18925990 - 18925941
Alignment:
Q  224 ttctttcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||| || |||||||||||||||||| || |||||||| |||||||||    
T  18925990 ttcttttttcctttttctctctattgttgttgaccaataaaaagagagaa 18925941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 43551021 - 43550960
Alignment:
Q  231 ttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaa 292  Q
    ||||| |||||||||||||||||| |||| ||| |||| |||  || |||||||||||||||    
T  43551021 ttactctttctctctattgttttttaccagtaaaaagatagagaaaaaaagttgtcgcaaaa 43550960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 21588913 - 21588869
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||| ||||||||||| ||||||||| |||||| |||||||||||    
T  21588913 tcttcctttttctctccattgtttttgaccaatgagaagagagaa 21588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 48057466 - 48057406
Alignment:
Q  246 attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    ||||||||| |||||||||||||||||| || ||| ||||| | |||| |||||| |||||    
T  48057466 attgtttttgaccaataagaagagagaaaaacaaaattgtcactaaagatgtcatcaaata 48057406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 35756075 - 35756142
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||| |||||||||||||||||||||||||||| || ||||||||| | ||||||||||| |||||    
T  35756075 tctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaata 35756142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 34021439 - 34021378
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| | |||||||||||    
T  34021439 tctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcat 34021378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 28263628 - 28263706
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| ||||||||||||| |||| |||||||||||| | ||||||||||| ||||    
T  28263628 tcttcctttttctctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgtcatgaaat 28263706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 44910799 - 44910890
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    |||||||||||||||| |||||||||||||||||| |   |||||||| ||||| |||||| ||||  ||| |  |||||||||||||||||    
T  44910799 tctctctattgtttttgaccaataagaagagagaaaatgtaagttgtcacaaaaattgtcactaaaagattgttcaaatatcattactcttt 44910890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16295559 - 16295617
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||| ||||||||| || ||||||||| ||||||||||    
T  16295559 tctctctattgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaagttgt 16295617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 43900867 - 43900933
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||| ||| |||||||||||||||||||||||| || ||||||||| | ||||||||| ||||||    
T  43900867 tctctccattatttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaat 43900933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 54233489 - 54233416
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  54233489 tcttactttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcat 54233416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 327
Target Start/End: Original strand, 50621953 - 50622046
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    ||||||||||||||||||||| | |||||| ||||||||| || || |||||| |||| |||||||| ||||| |  |  ||||||||||||||    
T  50621953 ctttttctctctattgtttttgatcaataacaagagagaacaacaaggttgtcccaaaggttgtcatgaaatagtcgttcaaatatcattactc 50622046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 29533854 - 29533914
Alignment:
Q  237 tttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||| ||||||||| |||||| ||||||||||| || ||||||||| ||||||||||    
T  29533854 tttctctcaattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaagttgt 29533914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 34208362 - 34208450
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    |||||||||||||||||| |||| ||||||||||| || ||||||||| ||||| ||||  | |||||||| |  |||||||| |||||    
T  34208362 tctctctattgtttttaatcaatgagaagagagaaaaacaaagttgtctcaaaaattgtattaaaataattgtcaaaatatcactactc 34208450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 2482662 - 2482616
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaa 273  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  2482662 tcttactttttctctctccattgtttttaaccaataagaagagagaa 2482616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 38471738 - 38471789
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||||||||||||||||||| ||||||||||| || ||||||||| ||||    
T  38471738 ctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaa 38471789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 38692306 - 38692255
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||||| ||||||||||||| |||| || |||||||||    
T  38692306 tttttctctctattgtttttgaccaataagaagatagaaaaagaaagttgtc 38692255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 44855334 - 44855412
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||| |||||||||||||||||||||||| |||||  ||||| | ||||||||||| ||||    
T  44855334 tcttcctttttctctctccattttttttaaccaataagaagagagaaaaataagattgtcactaaagttgtcatgaaat 44855412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 50879673 - 50879751
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| |||| ||||||||||||  ||||| ||| |||||||||||||||||| || ||||||||| | |||||||||||    
T  50879673 ttctctcttcctttttctctctccattgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgtcat 50879751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 52454080 - 52454002
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||  || ||||||||| | ||||||||||| ||||    
T  52454080 tcttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaat 52454002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 5188327 - 5188389
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||| |||||||||||||||| | ||||||||| ||  |||||||| ||||||||||    
T  5188327 tttttctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 5188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 7039211 - 7039173
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7039211 tttttctctctattgtttttgaccaataagaagagagaa 7039173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 11327203 - 11327269
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||| |||||||||||||||||  || || |||||| | ||||||||||| ||||    
T  11327203 tctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaat 11327269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 13159744 - 13159817
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  13159744 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 13159817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 49886758 - 49886816
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||    
T  49886758 tctctctattgtttttaaccaataaaaaaagagaataataaggttgtcctaaaagttgt 49886816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 50025661 - 50025603
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||| ||||||||||| || ||||||||| |||| |||||    
T  50025661 tctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 50025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 36819051 - 36819112
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  36819051 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 36819112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 47683885 - 47683974
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactct 328  Q
    |||||||| ||||||| ||||||||||||||||||  | || |||||| ||||||||||||  ||||  || |  |||||||||||||||    
T  47683885 tctctctaatgtttttgaccaataagaagagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactct 47683974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 53102882 - 53102817
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||| ||||||||| | |||||||||||||||| || || |||||| | |||||||||||    
T  53102882 tttttctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcat 53102817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 1031401 - 1031345
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||| ||||||||||||| |||| ||||||||||||  |||||||||    
T  1031401 tctccattgtttttgaccaataagaagaaagaaaaataaagttgtcataaaagttgt 1031345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 21481861 - 21481917
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||| |||||| ||||||||||| ||| | |||||| ||||||||||    
T  21481861 tctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgt 21481917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 29525316 - 29525360
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||    
T  29525316 tctttctttttctctctattgtttttgaccaataaaaagagagaa 29525360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 43460483 - 43460543
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    |||||||||||||||| |||||||||||||||||| |  || | |||| ||||||||||||    
T  43460483 tctctctattgtttttgaccaataagaagagagaaaatgaaggctgtcccaaaagttgtca 43460543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 9027708 - 9027799
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||  ||||||||||    ||||| || |  |||||||||||||||||    
T  9027708 tctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 9027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 33971966 - 33972036
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  |||||||||||||||| ||||||||||| || || |||||| ||||| ||||    
T  33971966 tctttctttttctctctccattgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaaattgt 33972036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 41877771 - 41877849
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||| | || |||||| || ||||||||| | ||||||||||||||||    
T  41877771 tcttcctttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaat 41877849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 44127180 - 44127110
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||| |||||||||||  |||||||||||||||| ||||||||||| ||| | ||||||  |||||||||    
T  44127180 tcttaatttttctctctccattgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgt 44127110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 48179035 - 48178984
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||| |||||||||||||| ||||||||| | |||| |||||    
T  48179035 tttttctctctattatttttaaccaataaaaagagagaaaactaaaattgtc 48178984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 49361833 - 49361755
Alignment:
Q  221 ttattctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||| |||| ||||||||||||  |||||| || |||||| |||||| |||| || ||||||||| ||||||||||    
T  49361833 ttattctctcttcctttttctctctccattgttattgaccaatgagaagaaagaataacaaagttgtcacaaaagttgt 49361755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 54379397 - 54379448
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||| ||| ||||| |||||||||||||||||| || |||||||||    
T  54379397 tttttctctccattatttttgaccaataagaagagagaaaaacaaagttgtc 54379448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 9557900 - 9557850
Alignment:
Q  247 ttgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||| ||||||||||| || ||| ||||| ||||||||||    
T  9557900 ttgtttttaaccaatgagaagagagaacaacaaaattgtctcaaaagttgt 9557850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 25559799 - 25559857
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| | |||| ||||||||||| |||||| ||||| |||| |||||    
T  25559799 tctctctattgtttttgatcaatgagaagagagaacaataaaattgtctcaaaggttgt 25559857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 27162447 - 27162377
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||| ||| |||||||||||||| |||| |||| | ||||||||||   |||||||||| |||||    
T  27162447 tttttctctccattatttttaaccaataaaaagatagaaaagtaaagttgtcaataaagttgtcaataaat 27162377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 30400144 - 30400071
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || ||  ||||| | |||||||||||    
T  30400144 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcat 30400071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 30664581 - 30664627
Alignment:
Q  224 ttctttcttactttttctctctattgtttttaaccaataagaagaga 270  Q
    |||| |||| ||||||||||||||||||||| |||||||| ||||||    
T  30664581 ttctctcttcctttttctctctattgtttttgaccaataaaaagaga 30664627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 270
Target Start/End: Original strand, 32151989 - 32152019
Alignment:
Q  240 ctctctattgtttttaaccaataagaagaga 270  Q
    |||||||||||||||||||||||||||||||    
T  32151989 ctctctattgtttttaaccaataagaagaga 32152019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 32931894 - 32931836
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||| | ||||||||    
T  32931894 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 32931836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 43149319 - 43149261
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||  ||||||||||    
T  43149319 tctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgt 43149261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 55264907 - 55264965
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaa 292  Q
    |||| |||||||||| ||||| |||||||||||||||  | |||||||||||| |||||    
T  55264907 ctttatctctctattatttttgaccaataagaagagaatacaataaagttgtcccaaaa 55264965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 23906963 - 23906902
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| |  || |||||| | |||||||||||    
T  23906963 tctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcat 23906902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 1261363 - 1261304
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||  |||||||||||||||||| |||||||| || || |||||||||    
T  1261363 tcttcctttttctctatctattgtttttaaccaatgagaagagaaaacaacaaagttgtc 1261304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 2280272 - 2280324
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||| ||||||||| |||||| ||||||||||| || ||||||||| ||||    
T  2280272 tctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 2280324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 7949871 - 7949930
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||||  ||| |||||||||||| | ||||||||| ||||||||||||    
T  7949871 tcttcctttttctctctccattttttttaaccaatcaaaagagagaaaaataaagttgtc 7949930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 9582128 - 9582088
Alignment:
Q  246 attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||||||||| ||| ||||| ||||||    
T  9582128 attgtttttaaccaataagaagagtgaaaaataaggttgtc 9582088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 12094370 - 12094334
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagag 271  Q
    |||||||||||||||||||  ||||||||||||||||    
T  12094370 tttttctctctattgttttagaccaataagaagagag 12094334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 12762915 - 12762859
Alignment:
Q  243 tctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    |||||||||||| |||||||| ||||||||| || |||||||||  |||| ||||||    
T  12762915 tctattgttttttaccaataaaaagagagaaaaagaaagttgtcataaaaattgtca 12762859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 20714326 - 20714385
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||||  ||||||||| ||||||||||||| |||| ||||| ||||||    
T  20714326 tcttcctttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtc 20714385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 298
Target Start/End: Original strand, 28269889 - 28269960
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||| ||||||||||||  ||||||||| |||||| | |||| |||| ||  ||||||||||||||||||||    
T  28269889 tcttcctttttctctctccattgtttttgaccaatgaaaagatagaaaaaagaagttgtcgcaaaagttgtc 28269960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 30633802 - 30633743
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||||  |||||| || |||||||||||||||||| ||||| ||||||    
T  30633802 tcttcctttttctctcttcattgttcttgaccaataagaagagagaaaaataaggttgtc 30633743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 31300897 - 31300985
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    |||||||||||||||| |||||||| || | |||| || ||||||||| ||| | ||||||| ||||  || |  ||||||||||||||    
T  31300897 tctctctattgtttttgaccaataacaaaaaagaacaacaaagttgtcccaagaattgtcataaaatggttgttcaaatatcattactc 31300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 36301180 - 36301140
Alignment:
Q  243 tctattgtttttaaccaataagaagagagaagaataaagtt 283  Q
    ||||||||||||||||||| ||||||||||| || ||||||    
T  36301180 tctattgtttttaaccaatgagaagagagaacaacaaagtt 36301140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 37215219 - 37215148
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||| ||||||||||||  ||||||||| |||||| | ||||||||| ||  |||||||| |||||||||||    
T  37215219 tcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtc 37215148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 38017894 - 38017862
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaa 273  Q
    ||||||||||||||| |||||||||||||||||    
T  38017894 tctctattgtttttatccaataagaagagagaa 38017862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 46323089 - 46323061
Alignment:
Q  241 tctctattgtttttaaccaataagaagag 269  Q
    |||||||||||||||||||||||||||||    
T  46323089 tctctattgtttttaaccaataagaagag 46323061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 33722043 - 33722138
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    |||||||||||||| ||||| | |||||||||||| ||  |||||| || || | ||||||| |||||||||||||| |||||| |||||||||||    
T  33722043 tttttctctctattattttttatcaataagaagagtgagaaataaaattatcactaaagttgacattaaataattatataaataccattactcttt 33722138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 35518370 - 35518428
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||    
T  35518370 tctctctattgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgt 35518428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 20534043 - 20533956
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcat 322  Q
    |||||||||||||| |||| ||| ||||| |||||| || || ||| ||||| |||||||||||| |||||||||||  |||||||||    
T  20534043 tttttctctctattattttcaacaaataaaaagagaaaaaaagaaaattgtcacaaaagttgtcactaaataattataaaaatatcat 20533956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 24491665 - 24491595
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||| |||||  ||||| ||||||||||    
T  24491665 tctttctttttctctttctattgtttttaaccaataagaagagagaacaataagattgtctcaaaagttgt 24491595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 29871331 - 29871264
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||| | ||||||||||| |||||    
T  29871331 tctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaagttgtcatgaaata 29871264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Original strand, 33857312 - 33857379
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||| ||||||||| ||||||||||||| |||| |||||||||||| | ||||||||| |||||||    
T  33857312 tctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtccttaaata 33857379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 44484644 - 44484566
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || ||||||||| | ||||||||||| ||||    
T  44484644 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaat 44484566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 4432422 - 4432488
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||| |||||||||||||||||| || ||||||| | |  |||||||||||||||    
T  4432422 tctctctattgtttttgaccaataagaagagagaaaaacaaagttgacactgaagttgtcattaaat 4432488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 43026031 - 43026089
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||| |||| |||||    
T  43026031 tctctctattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 43026089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 27307221 - 27307160
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| ||||| |||||| | |||||||||||    
T  27307221 tctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcat 27307160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 3299093 - 3299014
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||||||||||||||  |||||||||||||||||||||||||||  |||||  ||||| | ||| || ||||||||||    
T  3299093 tcttactttttctctctccattgtttttaaccaataagaagagagagaaataagattgtcaccaaaattatcattaaata 3299014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 19631471 - 19631530
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  19631471 tcttcctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtc 19631530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 19828372 - 19828431
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  19828372 tcttcctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtc 19828431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 34373099 - 34373155
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||||||||||||||||| |||||| ||||||||||| || ||||||||| ||||    
T  34373099 tttttctctctattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 34373155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 36909831 - 36909772
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||| || |||||||||    
T  36909831 tcttactttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 36909772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 37109358 - 37109314
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||    
T  37109358 tctttctttttctctctattgtttttgaccaataagaagagagaa 37109314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 14957689 - 14957776
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgt-cgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    |||||||||||||| ||||||||||||||||||| | || ||||| | ||||||||||||  ||||| || | |||||| ||||||||    
T  14957689 tctctattgtttttgaccaataagaagagagaagtagaaggttgtccccaaaagttgtcacaaaatagttgtataaataacattactc 14957776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 25997710 - 25997651
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagt 294  Q
    |||||||||||||||||||| |||||||| ||||||||| |  ||||||||| |||||||    
T  25997710 tttttctctctattgtttttgaccaataaaaagagagaaaataaaagttgtcacaaaagt 25997651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 32755758 - 32755833
Alignment:
Q  224 ttctttcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    |||| |||| |||||| |||||||||||||| |||||| | ||||||||| ||||| | |||| ||||||||||||    
T  32755758 ttctctcttcctttttttctctattgtttttgaccaatcaaaagagagaaaaataaggctgtctcaaaagttgtca 32755833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 9458521 - 9458579
Alignment:
Q  270 agaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactct 328  Q
    |||| |||||||||||||||||| ||||||||||||  ||||  |||||||||||||||    
T  9458521 agaaaaataaagttgtcgcaaaaattgtcattaaatggttatacaaatatcattactct 9458579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 16463383 - 16463445
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||||||| |||||||||||||||| | || ||  ||||| ||||||||||    
T  16463383 tttttctctctattgtttttgaccaataagaagagagcacaacaagattgtcccaaaagttgt 16463445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 29168808 - 29168881
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||||  ||||||  | |||||||||||||||||| ||||| |||||| | |||||||||||    
T  29168808 tcttactttttctctctccattgttaattaccaataagaagagagaaaaataatgttgtcaccaaagttgtcat 29168881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 37966451 - 37966517
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||| | ||||||||||| ||||    
T  37966451 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaat 37966517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 23048059 - 23047998
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  23048059 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 23047998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 6885007 - 6885071
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||| || ||||||||||||||| || ||||||||| | ||||||||||| ||||    
T  6885007 tctccattgtttttgactaataagaagagagaaaaacaaagttgtcactaaagttgtcatgaaat 6885071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 25094447 - 25094499
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||||||||||||| |||||| ||||||||||| || ||||||||| ||||    
T  25094447 tctctctattgtttttgaccaattagaagagagaacaacaaagttgtctcaaa 25094499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 38689004 - 38689092
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    ||||||||||||||||||||||||| ||||||||  || || |||||| ||||| || ||| |||||  || |  ||||||||||||||    
T  38689004 tctctctattgtttttaaccaataaaaagagagagaaagaaggttgtcccaaaaattttcactaaatggttgttcaaatatcattactc 38689092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 40721872 - 40721924
Alignment:
Q  245 tattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||| ||||||||||| || ||||||||| |||| |||||    
T  40721872 tattgtttttaaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 40721924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 8757627 - 8757697
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||  ||||||||||    
T  8757627 tctttctttttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgt 8757697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 13711144 - 13711214
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  |||||||||||||||| | ||||||||| ||  |||||||| ||||||||||    
T  13711144 tcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 13711214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 29582352 - 29582309
Alignment:
Q  243 tctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||| |||||||||||||||||| || |||||||||    
T  29582352 tctattgttttttaccaataagaagagagaaaaagaaagttgtc 29582309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 36383545 - 36383615
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | ||||||||    
T  36383545 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 43791767 - 43791676
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    |||||||||||||||| |||||||| ||||||||| |   | |||||| |||||||||||| ||||   || |  |||||||||||||||||    
T  43791767 tctctctattgtttttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactcttt 43791676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 11164352 - 11164294
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| |||||||||||||||| | ||||||||| ||  |||||||| ||||||||||    
T  11164352 tctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 11164294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 26273269 - 26273327
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||||||||||  | ||||  |||||| ||||||||||    
T  26273269 tctctctattgtttttgaccaataagaagagaacacaatatggttgtcccaaaagttgt 26273327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 272
Target Start/End: Original strand, 31629694 - 31629732
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagagaga 272  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  31629694 ctttctctctctattgtttttatccaataagaagagaga 31629732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 34141538 - 34141596
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||||||||||  | || ||||||||  ||||||||||    
T  34141538 tctctctattgtttttgaccaataagaagagaacacaacaaagttgttccaaaagttgt 34141596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 38464504 - 38464589
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatca 321  Q
    ||||||||||||| |||||| |||||||| || |||||| |  |||||| || ||||||||||||  |||| |||||| ||||||||    
T  38464504 tttttctctctatagtttttgaccaataaaaaaagagaaaaggaaagttatcacaaaagttgtca-caaattattatgcaaatatca 38464589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 39285948 - 39286006
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| |||||||||||||||||| || |||||| ||  |||||||| ||||||||||    
T  39285948 tctctccattgtttttaaccaataaaaaaagagaaaaaagaagttgtcacaaaagttgt 39286006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 13881191 - 13881248
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||| ||||||||| |||||| | ||||||| | |||||||||||| ||||||||||    
T  13881191 ctctccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgt 13881248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 14021316 - 14021373
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||| ||||||||| |||||| | ||||||| | |||||||||||| ||||||||||    
T  14021316 ctctccattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgt 14021373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 15019157 - 15019112
Alignment:
Q  228 ttcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||| ||| |||||| |||||||||||||||||| |||||||||    
T  15019157 ttcttattttctctctccattgtttttaaccaataaaaagagagaa 15019112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 39133800 - 39133864
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    ||||||||||||||||||||||  ||| |||||||||||||| || |||||| || ||| |||||    
T  39133800 ttctttcttactttttctctctccattatttttaaccaataaaaaaagagaaaaacaaaattgtc 39133864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 5962733 - 5962777
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagtt 283  Q
    |||||| ||||||||| |||||||||||||||||| || ||||||    
T  5962733 tctctccattgtttttgaccaataagaagagagaaaaacaaagtt 5962777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 7497967 - 7497907
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    ||||||||||||||| ||||||| ||||||||||| |  |||||||||   ||||||||||    
T  7497967 tctctctattgttttgaaccaatgagaagagagaaaataaaagttgtcaacaaagttgtca 7497907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 9377734 - 9377682
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    ||||| |||| ||||| |||||||||||||||||| || ||||||||| ||||    
T  9377734 tctctatattctttttgaccaataagaagagagaacaacaaagttgtctcaaa 9377682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 12175308 - 12175236
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataa 307  Q
    |||||||||  ||||||||| |||||| | ||||||| | || ||||||||| | |||||| |||||||||||    
T  12175308 tttttctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttatcattaaataa 12175236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 14151742 - 14151706
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagag 271  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  14151742 tttttttctctattgtttttatccaataagaagagag 14151706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 19913867 - 19913926
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||||  |||||||||||||||| | ||||||||| || |||||||||    
T  19913867 tcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtc 19913926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 30487430 - 30487394
Alignment:
Q  237 tttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  30487430 tttctctccattgtttttgaccaataagaagagagaa 30487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 38598325 - 38598269
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagtt 295  Q
    |||||||||||||||| |||||||||||||||  | || || |||||| ||||||||    
T  38598325 tctctctattgtttttgaccaataagaagagaacacaacaaggttgtcacaaaagtt 38598269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 35616789 - 35616724
Alignment:
Q  227 tttcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaa 292  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||| || || |||||| |||||    
T  35616789 tttcttactttctctctctattgtttttgaccaataagaagagagaacaacaaggttgtcccaaaa 35616724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 15917996 - 15917941
Alignment:
Q  245 tattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||| |||||||||||||||||  |||||||||||||| |||||||||||    
T  15917996 tattgtttttgaccaataagaagagagagaaataaagttgtcgctaaagttgtcat 15917941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 125183 - 125245
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||||||| |||||| | ||||||||| ||  |||||||||||||||||||    
T  125183 tttttctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgt 125245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 11306787 - 11306849
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||||||||||||| | ||||||||| ||  |||||||| ||||||||||    
T  11306787 tttttctctctattgtttttaaccaatgaaaagagagaaaaaagaagttgtctcaaaagttgt 11306849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 12401289 - 12401353
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||||| | ||||||||||| ||||    
T  12401289 tctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaat 12401353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 3154619 - 3154528
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    |||||| ||| |||||||| ||||| ||||||||| |||||||||||| | ||| ||||||| || ||| | |  |||||||||||||||||    
T  3154619 tctctccattttttttaactaataaaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaatatcattactcttt 3154528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 33243739 - 33243661
Alignment:
Q  219 ttttattctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagtt 295  Q
    |||||||||||||| ||||||||||||  |||||||||||||||| | ||||||||| ||  || ||||| ||||||||    
T  33243739 ttttattctttctttctttttctctctccattgtttttaaccaatgaaaagagagaaaaaataaattgtcacaaaagtt 33243661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 5005208 - 5005266
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||| | ||||||||| || ||||||||| ||||||||||    
T  5005208 tctctctattgtttttgaccaatgataagagagaacaacaaagttgtctcaaaagttgt 5005266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 8959243 - 8959316
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||| ||||||||| || || |||||||| |||||||||||    
T  8959243 tctttctttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcat 8959316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 9594561 - 9594634
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||  ||||| |||||| | |||||||||||    
T  9594561 tctttctttttctctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgtcat 9594634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 15622127 - 15622200
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  15622127 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 15622200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 30574365 - 30574292
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || ||||||||| | ||| |||||||    
T  30574365 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcat 30574292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 31626052 - 31625994
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||| ||||| |||||| ||||||||||| ||||||||||||  |||||||||    
T  31626052 tctctctattttttttgaccaatgagaagagagaacaataaagttgtcttaaaagttgt 31625994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 33823682 - 33823609
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  33823682 tctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 33823609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 9240214 - 9240303
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactct 328  Q
    ||||||||||||||||||||||||| || | |||| || ||| || || ||||||||||||  |||||||| |  |||||| ||||||||    
T  9240214 tctctctattgtttttaaccaataaaaataaagaaaaagaaatttatcacaaaagttgtcaccaaataattgtacaaatatgattactct 9240303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 327
Target Start/End: Original strand, 22402727 - 22402819
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    |||||| || |||||||||| | ||||||| || ||| ||  ||||| ||||| ||||||||||||| ||||||||||  ||||||||||||||    
T  22402727 ctttttttcactattgttttga-ccaataaaaaaagaaaaatataaaattgtcacaaaagttgtcatcaaataattatacaaatatcattactc 22402819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 28501712 - 28501777
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaa 304  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||| | |||||||||| ||||    
T  28501712 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcactaaa 28501777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 36786234 - 36786173
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||| |||||||  ||||||||| |  ||||||||| |||||||||||||    
T  36786234 tctctctattgtttttgaccaatagaaagagagaaaagcaaagttgtcacaaaagttgtcat 36786173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 37821120 - 37821059
Alignment:
Q  236 ttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||||| |||||||||||||||  | || || |||||| ||||||||||    
T  37821120 ttttctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 37821059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 331
Target Start/End: Original strand, 1760456 - 1760548
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctttg 331  Q
    |||||||||||||||| |||||||||||||||||| |  |  |||| | | |||||||||| ||||||  |||  |||||||||| |||||||    
T  1760456 tctctctattgtttttgaccaataagaagagagaaaagcatggttgacactaaagttgtcaataaatacatatacaaatatcattgctctttg 1760548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 2051009 - 2051068
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||| || || ||||||    
T  2051009 tcttactttttctctctccattgtttttgaccaataagaagagagaaaaacaatgttgtc 2051068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 14126504 - 14126540
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagaga 270  Q
    ||||||||||||||||||||| |||||||||||||||    
T  14126504 ctttttctctctattgtttttgaccaataagaagaga 14126540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 14914453 - 14914512
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||  ||||||||| ||||||||||||||| || || |||||||||    
T  14914453 tcttactttttctctctccattgtttttgaccaataagaagagataaaaacaaagttgtc 14914512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 31284394 - 31284312
Alignment:
Q  219 ttttattctttct--tactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||  | ||||||||||||  |||||||||||||||| | ||||||||  ||  |||||||||||||||||||    
T  31284394 ttttattctttctctttctttttctctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcgcaaaagttgt 31284312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 7077327 - 7077249
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||| ||||| |||||| | ||||||||| || ||||||||| | ||||||||||||||||    
T  7077327 tcttcctttttctctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaat 7077249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 12417721 - 12417780
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtc 298  Q
    |||||| ||||||||||||||| ||||||||||||  | ||||||||| | |||||||||    
T  12417721 tctctccattgtttttaaccaaaaagaagagagaaacacaaagttgtcaccaaagttgtc 12417780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 1108093 - 1108139
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgt 285  Q
    |||||||||||||||| |||||| ||||||||||| || ||||||||    
T  1108093 tctctctattgtttttgaccaatgagaagagagaacaacaaagttgt 1108139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 3263496 - 3263423
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||| ||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  3263496 tctttctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 3263423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 3518278 - 3518336
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||||| |||||| ||||||||||| || ||||||||| |||| |||||    
T  3518278 tctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaaggttgt 3518336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 4985458 - 4985492
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaa 273  Q
    ||||||||||||||||| |||||||||||||||||    
T  4985458 tctctctattgtttttatccaataagaagagagaa 4985492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 9596802 - 9596729
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || ||  ||||| | |||||||||||    
T  9596802 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcat 9596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 12203236 - 12203298
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||| ||||||||||| ||||||||| | || ||  ||||| ||||||||||    
T  12203236 tttttctctctattggttttaaccaatgagaagagaggacaacaagattgtcacaaaagttgt 12203298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 12512876 - 12512949
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || ||  ||||| | |||||||||||    
T  12512876 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcat 12512949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 12612993 - 12612935
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||||| |||||| ||||||||||| || || |||||| ||||||||||    
T  12612993 tctctccattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgt 12612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 17489431 - 17489504
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    ||||| |||||||||||  ||||||||| |||||||||||||||||| || ||  ||||| | |||||||||||    
T  17489431 tcttaatttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcat 17489504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 19271942 - 19272015
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || |||||| || | ||| |||||||    
T  19271942 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcactaaaattgtcat 19272015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 31627120 - 31627034
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaag-ttgtcattaaataattatgtaaatatcatta 324  Q
    |||||||||| |||||||| ||| ||||||||| | || ||| || || |||||  ||||||| |||||||||| ||||||||||||    
T  31627120 tctctctattatttttaactaattagaagagagtaaaaaaaaattatcacaaaaaattgtcataaaataattatataaatatcatta 31627034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 35358911 - 35358853
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    ||||||||||||||||  ||||| ||||||||||| || ||||||||| |||| |||||    
T  35358911 tctctctattgtttttgtccaatgagaagagagaacaacaaagttgtctcaaaggttgt 35358853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 38919937 - 38919999
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||| ||||| |||||| ||||||||||| || || ||||||  |||||||||    
T  38919937 tttttctctctattatttttgaccaatgagaagagagaacaacaaggttgtcctaaaagttgt 38919999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 41210490 - 41210456
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||||||||||||| ||||||||||||||||||    
T  41210490 tctctctattgtttttgaccaataagaagagagaa 41210456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 6515418 - 6515381
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagaga 272  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  6515418 tttttctctctattgtttttaaccaatgaaaagagaga 6515381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 22653731 - 22653788
Alignment:
Q  236 ttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaag 293  Q
    ||||||||||||| ||||| |||||| ||||||||||| |||||  ||||| ||||||    
T  22653731 ttttctctctattatttttgaccaatgagaagagagaacaataagattgtcccaaaag 22653788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 22920468 - 22920407
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||| | | |||||||||    
T  22920468 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactatagttgtcat 22920407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 25345421 - 25345473
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataa 279  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| |||||    
T  25345421 tcttcctttttctctctttattgtttttgaccaataagaagagagaaaaataa 25345473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 43153053 - 43152989
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| |||| ||||||||||||  ||||||||| |||||| ||||||||||| || |||||||||    
T  43153053 ttctctcttcctttttctctctccattgtttttgaccaatgagaagagagaacaacaaagttgtc 43152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 273
Target Start/End: Original strand, 4820252 - 4820284
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaa 273  Q
    |||||||||||||| ||||||||||||||||||    
T  4820252 tctctattgttttttaccaataagaagagagaa 4820284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 5740436 - 5740472
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagaga 270  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  5740436 ctttctctctctattgtttttatccaataagaagaga 5740472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 8955646 - 8955543
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattact 326  Q
    |||| ||||||||||  |||||||||||||||||||| || | |||| || || |||||| ||| |||| |||| ||||  || |  |||||||||||||    
T  8955646 tcttcctttttctctttctattgtttttaaccaataacaaaaaagaacaacaaggttgtcccaagagttatcatgaaatggttgttcaaatatcattact 8955547  T
Q  327 cttt 330  Q
    ||||    
T  8955546 cttt 8955543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 9599725 - 9599685
Alignment:
Q  246 attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    ||||||||| ||| |||||||||||||| ||||||||||||    
T  9599725 attgttttttaccgataagaagagagaaaaataaagttgtc 9599685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 10469923 - 10469871
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||| ||||||||| |||||| ||||||||||| || ||||||||| ||||    
T  10469923 tctctccattgtttttgaccaatgagaagagagaacaacaaagttgtctcaaa 10469871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 28042044 - 28041976
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||| || || |||||||||||| | |||||||| |||| ||||| |||||| ||||||||||    
T  28042044 tcttccttttgctatcaattgtttttaactattaagaagaaagaaaaataatgttgtcccaaaagttgt 28041976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 39032585 - 39032549
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagaga 270  Q
    |||| |||||||||||||||| |||||||||||||||    
T  39032585 ctttctctctctattgtttttgaccaataagaagaga 39032549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 327
Target Start/End: Complemental strand, 46844217 - 46844129
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    |||||| |||||||||||||||||| ||||||||| || ||||||||| | ||||||||| |||||||  | |  ||||||||||||||    
T  46844217 tctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattactc 46844129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 22071593 - 22071640
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||    
T  22071593 tctctctattgtttttaaccaataagaagagagaaaaagaaagttgtc 22071640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 8026752 - 8026679
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || ||||||||| | |||||||||||    
T  8026752 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcat 8026679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 31318844 - 31318890
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  31318844 ctctctattgtttttaaccaatgagaagagagaagaataaaattgtc 31318890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 36728610 - 36728537
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    ||||| |||||||||||  ||||||||| |||||||||||||||||| || ||||||||| | |||||||||||    
T  36728610 tcttaatttttctctctccattgttttttaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcat 36728537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 4949222 - 4949152
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||  |||||||||||||||||| |||||| |||| || ||||||||| ||||||||||    
T  4949222 tcttcctttttctctttctattgtttttaaccaatgagaagaaagaacaacaaagttgtctcaaaagttgt 4949152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 15638208 - 15638286
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| |||||||||||||||||  |||||||||  ||||||||||||||||| || || |||||| | |||||||||||    
T  15638208 ttctctcttactttttctctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgtcat 15638286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 24235403 - 24235481
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| | |||| ||||| | ||||||||||| ||||    
T  24235403 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaat 24235481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 44368190 - 44368112
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| || ||||||||||||||| ||||| |||||| | ||||||||||| ||||    
T  44368190 tcttcctttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaat 44368112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 49424808 - 49424730
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||||||||||||||| |||||| || ||||||||| | |||| |||| ||||||    
T  49424808 tcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagctgtccttaaat 49424730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 3475963 - 3476053
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    |||||||||||||||| |||||| | |||| |||| ||||| |||||| |||| |||||||| ||||  || |  ||||||||||||||||    
T  3475963 tctctctattgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgtcatcaaatggttgtcaaaatatcattactctt 3476053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 5208315 - 5208242
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  5208315 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 5208242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 19314999 - 19315053
Alignment:
Q  237 tttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaa 291  Q
    |||||||||||||||||| ||||||||||||| |||| || ||||||||| ||||    
T  19314999 tttctctctattgtttttgaccaataagaagaaagaaaaagaaagttgtcacaaa 19315053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 27001397 - 27001324
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  27001397 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 27001324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 47105994 - 47106067
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  47105994 tctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 47106067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 13267466 - 13267410
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagtt 283  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||| || ||||||    
T  13267466 tcttactttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 13267410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 51377281 - 51377209
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | ||||||||||    
T  51377281 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtca 51377209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 13182420 - 13182460
Alignment:
Q  233 actttttctctctattgtttttaaccaataagaagagagaa 273  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  13182420 actttttctctctattgtttttaaccaataaaaaaagagaa 13182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 21766642 - 21766698
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagtt 295  Q
    ||||||||||||||||||||||||||||||||  | || || |||||| ||||||||    
T  21766642 tctctctattgtttttaaccaataagaagagaacacaacaaggttgtcccaaaagtt 21766698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 29949661 - 29949602
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||| || |||||||||    
T  29949661 tcttcctttttctctatctattgttttttaccaataagaagagagaaaaagaaagttgtc 29949602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 41495096 - 41495155
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || |||||||||    
T  41495096 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtc 41495155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 42178024 - 42177980
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgt 285  Q
    |||||||| |||||||||||||||||||||||| || ||||||||    
T  42178024 tctctattatttttaaccaataagaagagagaaaaacaaagttgt 42177980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 330
Target Start/End: Complemental strand, 42915207 - 42915105
Alignment:
Q  229 tcttactttttctct--ctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattact 326  Q
    |||| ||||||||||  |||||||||||||||||| | ||||||||| ||  |||||||| |||||||||| || ||||| || |  |||||||| ||||    
T  42915207 tcttcctttttctctttctattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatagttgttcaaatatcactact 42915109  T
Q  327 cttt 330  Q
    ||||    
T  42915108 cttt 42915105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 7037477 - 7037399
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| |||| ||||||||||||  ||||||||| |||||||||||| ||||| || || |||||| | |||||||||||    
T  7037477 ttctctcttcctttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcat 7037399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 51691555 - 51691626
Alignment:
Q  259 aataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    ||||||||||||||| || ||||||||   |||||||||||| ||| | || | ||||||||||||||||||    
T  51691555 aataagaagagagaaaaacaaagttgttataaaagttgtcatcaaacagttgtttaaatatcattactcttt 51691626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 3223072 - 3223145
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||| ||||    
T  3223072 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagttttcat 3223145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 6126948 - 6127038
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    ||||||||||||| || ||||||||||| |||||| |   | |||||| |||||||||||||||||   || |  ||||||||||||||||    
T  6126948 tctctctattgttcttgaccaataagaaaagagaaaaggtaggttgtcacaaaagttgtcattaaaaggttgttcaaatatcattactctt 6127038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Original strand, 6686141 - 6686175
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||||||||||||| ||||||||||||||||||    
T  6686141 tctctctattgtttttgaccaataagaagagagaa 6686175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 20632636 - 20632563
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    ||||||| |||||||||  ||||||||| ||||||| ||||||| || |||||||||||| | ||| |||||||    
T  20632636 tcttactatttctctctccattgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcat 20632563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 25936323 - 25936396
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||||  ||||||||| ||||||||||| |||||| || ||  ||||| |||||||| ||||    
T  25936323 tcttactttttctctctccattgtttttgaccaataagaaaagagaaaaacaagattgtcacaaaagttatcat 25936396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 30250270 - 30250216
Alignment:
Q  243 tctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||| |||||||| ||||||||| || ||||||||| |||| |||||    
T  30250270 tctattgtttttgaccaataaaaagagagaacaacaaagttgtctcaaaggttgt 30250216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 30866441 - 30866511
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||| ||||| || ||||| ||||||||| | |||| ||||| | |||||| |||||||||    
T  30866441 tttttctctctattatttttgactaataaaaagagagaaaactaaaattgtcaccaaagttatcattaaat 30866511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 36081906 - 36081964
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||| |||  |||||| ||||| |||||| ||||||||||    
T  36081906 tctctctattgtttttgaccaatgagagaagagaataataaggttgtcccaaaagttgt 36081964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 50291377 - 50291435
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||||||||||  | || || |||||| ||||||||||    
T  50291377 tctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 50291435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 56025351 - 56025417
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||| ||||||||| |||||| | ||||||||| |  ||||||||| | ||||||||||||||||    
T  56025351 tctctccattgtttttgaccaatcaaaagagagaaaatcaaagttgtcaccaaagttgtcattaaat 56025417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 20056466 - 20056511
Alignment:
Q  228 ttcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||||| ||| |||||| ||||||||| ||||||||||||||||||    
T  20056466 ttcttattttctctctcaattgtttttgaccaataagaagagagaa 20056511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 30973664 - 30973713
Alignment:
Q  224 ttctttcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||| |||| ||||||||||| || ||||||||||||||| |||||||||    
T  30973664 ttctctctttctttttctctccatagtttttaaccaataaaaagagagaa 30973713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 33484082 - 33484021
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| | |||||||||||||||| | ||| |||||| | |||||||||||    
T  33484082 tctctccattgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgtcat 33484021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 40258283 - 40258361
Alignment:
Q  224 ttctttcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaa 304  Q
    |||| |||||| ||||||||||  ||| |||||||||||| ||||||||| || ||  ||||| | |||||||||||||||    
T  40258283 ttctctcttacattttctctct--tgtatttaaccaataaaaagagagaaaaacaagattgtcaccaaagttgtcattaaa 40258361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 273
Target Start/End: Complemental strand, 2193794 - 2193751
Alignment:
Q  232 tactttttctctct--attgtttttaaccaataagaagagagaa 273  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||    
T  2193794 tactttttctctctccattgtttttgaccaataagaagagagaa 2193751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 18568801 - 18568730
Alignment:
Q  231 ttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||||||  ||||||||| ||||||||||||| |||| |  || |||||| | |||||||||||    
T  18568801 ttactttttctctcttcattgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgtcat 18568730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 18944382 - 18944438
Alignment:
Q  241 tctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||| ||||||| |||||||||||||||  | ||||| |||||| ||||||||||    
T  18944382 tctctaatgtttttgaccaataagaagagaacacaataaggttgtcccaaaagttgt 18944438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 37732050 - 37732090
Alignment:
Q  245 tattgtttttaaccaataagaagagagaagaataaagttgt 285  Q
    |||||||||| |||||||| ||||||||| |||||||||||    
T  37732050 tattgtttttgaccaataaaaagagagaacaataaagttgt 37732090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 43307340 - 43307308
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagag 271  Q
    ||||||||||||||||||||||||| |||||||    
T  43307340 tctctctattgtttttaaccaataaaaagagag 43307308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 51318786 - 51318830
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaa 273  Q
    |||| ||||||||||| |||||||||||||||||| || ||||||    
T  51318786 tcttcctttttctctcgattgtttttaaccaataaaaaaagagaa 51318830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 237374 - 237307
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaata 306  Q
    |||||| ||| ||||| |||||||||||||||||| || |||| |||| |||||||||||||||||||    
T  237374 tctctccattatttttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgtcattaaata 237307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 17835695 - 17835773
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||| || |||||||||   ||||||||| ||||||    
T  17835695 tcttcctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtccttaaat 17835773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 2881428 - 2881494
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||| ||||| |||||||||||||||||  || ||||||||| | ||||||||||||||||    
T  2881428 tctctctattatttttgaccaataagaagagagagaaacaaagttgtcaccaaagttgtcattaaat 2881494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 6435114 - 6435192
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||||| |  |||||||||||||||||||||||||||| || || |||||| | ||| |||||||    
T  6435114 ttctctcttactttttctctatccattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcat 6435192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 12441605 - 12441683
Alignment:
Q  224 ttctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| |||||||||||||||||  ||||||||||||| |||||||||||||| |  || |||||| | |||||||||||    
T  12441605 ttctctcttactttttctctctccattgtttttaaccgataagaagagagaaaagcaaggttgtcaccaaagttgtcat 12441683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 15328568 - 15328650
Alignment:
Q  225 tctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||| ||||||||||||  ||||||||| |||||| | ||||||| | || ||||||||| | ||||||||||||||||    
T  15328568 tctttcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaat 15328650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 7304081 - 7304023
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||| ||||||||||| ||| | |||||| ||||||||||    
T  7304081 tctctctattgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgt 7304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 1803964 - 1804025
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  1803964 tctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcat 1804025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 21210339 - 21210398
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||| || || ||||||    
T  21210339 tcttactttttctctctccattgtttttaatcaataagaagagagaaaaacaaggttgtc 21210398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 4923025 - 4923107
Alignment:
Q  225 tctttcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    ||||| || ||||||||||||  ||| |||||||||||||||||||||||| || ||| || ||  |||||||||||| ||||    
T  4923025 tctttttttctttttctctctcaattatttttaaccaataagaagagagaaaaacaaaattatcataaaagttgtcatcaaat 4923107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 15364742 - 15364820
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||| | ||||||| | || ||||||||| | ||||||||||||||||    
T  15364742 tcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaat 15364820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 25924852 - 25924774
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||| | ||||||| | || ||||||||| | ||||||||||||||||    
T  25924852 tcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaat 25924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 2862167 - 2862233
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||| ||||| ||||||||||| |||||  || ||| ||||| | ||||||||||||||||    
T  2862167 tctctctattatttttgaccaataagaaaagagagaaacaaaattgtcaccaaagttgtcattaaat 2862233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 3339475 - 3339409
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||||||||||||| |||||||| ||||||||| || ||  ||||| | ||||||||||| ||||    
T  3339475 tctctctattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaat 3339409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 12151833 - 12151787
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgt 285  Q
    |||||| ||||||||| |||||||||||||||||| || ||||||||    
T  12151833 tctctccattgtttttgaccaataagaagagagaacaacaaagttgt 12151787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 17442917 - 17442975
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| | |||||||||||||  | ||||| |||||| ||||||||||    
T  17442917 tctctctattgtttttgatcaataagaagagaacacaataaggttgtcccaaaagttgt 17442975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 22422245 - 22422335
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    |||||| ||||||||| || ||| ||||||||||| || ||||||||  ||||||||||    |||||||| |  ||||||||||||||||    
T  22422245 tctctccattgtttttgactaatgagaagagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaatatcattactctt 22422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 24881754 - 24881664
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactctt 329  Q
    ||||| |||| ||||| || ||||||||||||||| |||||  ||||  ||||| ||||||| |||| | | | |||||||||||||||||    
T  24881754 tctctatattctttttgactaataagaagagagaaaaataagattgttacaaaaattgtcatcaaatgactgtataaatatcattactctt 24881664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 31480822 - 31480765
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||| ||||||||||| |||| ||||||||||||| ||||||||| ||  ||||||||    
T  31480822 tcttcctttttctctccattgattttaaccaataaaaagagagaaaaaagaagttgtc 31480765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 328
Target Start/End: Original strand, 3401165 - 3401263
Alignment:
Q  229 tcttactttttctctctattgtttttaaccaataagaagagagaagaataaag-ttgtcgcaaaagttgtcattaaataattatgtaaatatcattactc 327  Q
    ||||||||||| ||| |||||||||| |||||||| || |||||| || |||| ||||| ||||||| || || |||||||| |  ||||||||||||||    
T  3401165 tcttactttttttctttattgttttttaccaataa-aaaagagaa-aagaaagattgtcacaaaagtcgttatcaaataattgtacaaatatcattactc 3401262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 3660335 - 3660268
Alignment:
Q  235 tttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||||||||  ||||||||| |||||||| ||||||||| || || |||||| | |||||||||||    
T  3660335 tttttctctctgcattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtcat 3660268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 12501557 - 12501612
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagt 282  Q
    |||||||||||||||||  ||||||||| || ||||||||||||||| || |||||    
T  12501557 tcttactttttctctctccattgtttttgacgaataagaagagagaaaaacaaagt 12501612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 4826 - 4780
Alignment:
Q  240 ctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  4826 ctctctattgtttttaaccaatgagaagagagaagaataaaattgtc 4780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 24768 - 24815
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtc 286  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  24768 tctctccattgtttttaaccaataagaagagagaaaaataaggttgtc 24815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 1484 - 1411
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || ||||||||| | ||| |||||||    
T  1484 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcat 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 17070 - 17136
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||||| ||||||||| |||||| ||||||||||  || ||||||||| | ||||||||||||||||    
T  17070 tctctccattgtttttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgtcattaaat 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 147244 - 147171
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||| ||||||||||||  ||||||||| |||||||||||||||||| || || |||||| | |||||||||||    
T  147244 tcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 147171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 198405 - 198317
Alignment:
Q  242 ctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaataattatgtaaatatcattactcttt 330  Q
    ||||||||||||||| |||| | ||||||||  |||||| || || ||||| | ||||| |||||| |||  |||||||||||||||||    
T  198405 ctctattgtttttaatcaatgaaaagagagacaaataaaattatcacaaaaatagtcatcaaataaatattcaaatatcattactcttt 198317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 145142 - 145200
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||||||||||||||| |||||||||||||||  | || || |||||| ||||||||||    
T  145142 tctctctattgtttttgaccaataagaagagaacacaacaaggttgtcccaaaagttgt 145200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 305
Target Start/End: Original strand, 9513 - 9591
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcattaaat 305  Q
    |||| ||||||||||||  ||||||||| |||||| | ||||||| | || ||||||||| | ||||||||||||||||    
T  9513 tcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaat 9591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 3026 - 3096
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  ||||||||| |||||| | ||||||| | |||||||||||| ||||||||||    
T  3026 tcttcctttttctctctccattgtttttgaccaatgaaaagagagcacaataaagttgtcccaaaagttgt 3096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 31588 - 31518
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgt 297  Q
    |||| ||||||||||||  |||||||||||||||| | ||||||||| || ||||||||| ||||| ||||    
T  31588 tcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 21378 - 21444
Alignment:
Q  234 ctttttctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||||||||||| |||||||||| |||  || || |||||| ||| |||||||||    
T  21378 ctttttatctctattgtttttaactaataagaagatagagaaaaaaggttgtctcaatagttgtcat 21444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 88308 - 88270
Alignment:
Q  235 tttttctctctattgtttttaaccaataagaagagagaa 273  Q
    ||||||||||||||||||||||||| ||| |||||||||    
T  88308 tttttctctctattgtttttaaccattaaaaagagagaa 88270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 204420 - 204363
Alignment:
Q  242 ctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtca 299  Q
    ||||||||||||| |||||||||||||||||| ||  |  ||||| ||||||||||||    
T  204420 ctctattgtttttgaccaataagaagagagaaaaagtagattgtcacaaaagttgtca 204363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 249118 - 249057
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagagaagaataaagttgtcgcaaaagttgtcat 300  Q
    |||||| ||||||||| | |||||||||||||||| || || |||||| | |||||||||||    
T  249118 tctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcat 249057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 3634 - 3602
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagag 271  Q
    ||||||||||||||||| |||||||||||||||    
T  3634 tctctctattgtttttatccaataagaagagag 3602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 6119 - 6087
Alignment:
Q  239 tctctctattgtttttaaccaataagaagagag 271  Q
    ||||||||||||||||| |||||||||||||||    
T  6119 tctctctattgtttttatccaataagaagagag 6087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 6900 - 6970
Alignment:
Q  229 tcttactttttctctct--attgtttttaaccaataagaagagagaagaataaagttgtcg-caaaagttgt 297  Q
    |||| ||||||||||||  |||||||||||||||| | ||||||| |||| |||||||||| ||||||||||    
T  6900 tcttcctttttctctctccattgtttttaaccaatgaaaagagag-agaaaaaagttgtcgccaaaagttgt 6970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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