View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8905A_low_92 (Length: 300)
Name: NF8905A_low_92
Description: NF8905A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8905A_low_92 |
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Alignment Details
Target: chr8 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 105 - 270
Target Start/End: Original strand, 4664155 - 4664316
Alignment:
| Q |
105 |
tcaacatacatgaaactacagtctcaaatcaataagaaggttccaacagtgtcgactgcaagagtttctccaagcaccaaccaatggtggagaaccgtgc |
204 |
Q |
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| T |
4664155 |
tcaacatacatcaaactacagtctcaaatcaataagaaggtttcaacagtgtcgattgcaagagttcctccaagcaccga----tggtggagaactgtgc |
4664250 |
T |
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| Q |
205 |
accaaaagatctcgatcagaagaagcaatgagtttaaccatgaagtcttcacaatagttacctttg |
270 |
Q |
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| T |
4664251 |
accaaaagatctcgatcggaagaagcaacgagcttaaccatgaagtcttcacaatagttgcctttg |
4664316 |
T |
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