View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8906_low_10 (Length: 483)

Name: NF8906_low_10
Description: NF8906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8906_low_10
NF8906_low_10
[»] chr1 (89 HSPs)
chr1 (165-463)||(17490253-17490551)
chr1 (165-230)||(639797-639862)
chr1 (165-230)||(33604068-33604133)
chr1 (165-230)||(48022593-48022658)
chr1 (168-235)||(37734853-37734920)
chr1 (165-230)||(6065538-6065603)
chr1 (165-230)||(8258020-8258085)
chr1 (167-230)||(31008338-31008401)
chr1 (165-223)||(5856434-5856492)
chr1 (165-230)||(23944035-23944100)
chr1 (167-220)||(27206767-27206820)
chr1 (165-230)||(31008257-31008322)
chr1 (166-230)||(3384221-3384285)
chr1 (166-230)||(35367556-35367620)
chr1 (166-221)||(37734780-37734835)
chr1 (168-230)||(27206839-27206901)
chr1 (165-221)||(4060178-4060234)
chr1 (166-230)||(6065459-6065523)
chr1 (166-230)||(8257941-8258005)
chr1 (166-230)||(14418135-14418199)
chr1 (166-221)||(2349763-2349818)
chr1 (166-221)||(4602651-4602706)
chr1 (166-221)||(34658393-34658448)
chr1 (166-221)||(40262475-40262530)
chr1 (166-223)||(2352973-2353030)
chr1 (169-230)||(4060252-4060313)
chr1 (166-230)||(639877-639941)
chr1 (167-223)||(1035892-1035948)
chr1 (165-221)||(4602721-4602777)
chr1 (165-221)||(5431417-5431473)
chr1 (165-221)||(19175665-19175721)
chr1 (166-230)||(48022673-48022737)
chr1 (166-221)||(3384301-3384356)
chr1 (168-230)||(1035967-1036029)
chr1 (165-223)||(10256786-10256844)
chr1 (165-223)||(34597525-34597583)
chr1 (165-230)||(40262545-40262608)
chr1 (165-217)||(15439939-15439991)
chr1 (166-230)||(33603989-33604053)
chr1 (166-230)||(52923401-52923465)
chr1 (167-221)||(2349835-2349890)
chr1 (166-221)||(15439869-15439924)
chr1 (169-207)||(2352916-2352954)
chr1 (167-221)||(5431348-5431402)
chr1 (167-221)||(6079142-6079196)
chr1 (169-223)||(6156639-6156693)
chr1 (165-230)||(15351792-15351857)
chr1 (165-214)||(34597590-34597639)
chr1 (169-230)||(34953977-34954038)
chr1 (165-230)||(36040144-36040209)
chr1 (167-200)||(36535717-36535750)
chr1 (165-230)||(52923321-52923386)
chr1 (165-221)||(2122646-2122702)
chr1 (165-221)||(6283612-6283668)
chr1 (175-235)||(14214543-14214603)
chr1 (166-222)||(14967303-14967359)
chr1 (181-237)||(35366962-35367018)
chr1 (165-221)||(52112883-52112939)
chr1 (165-216)||(9135595-9135645)
chr1 (165-228)||(15057657-15057720)
chr1 (165-216)||(45925257-45925307)
chr1 (167-214)||(46906940-46906987)
chr1 (173-219)||(3549788-3549834)
chr1 (165-199)||(3606290-3606324)
chr1 (172-230)||(8338673-8338731)
chr1 (163-229)||(19580183-19580249)
chr1 (167-221)||(24981848-24981902)
chr1 (165-215)||(34658463-34658513)
chr1 (165-199)||(37255155-37255189)
chr1 (165-199)||(39181078-39181112)
chr1 (167-229)||(39940565-39940627)
chr1 (172-230)||(45115254-45115312)
chr1 (169-235)||(46412769-46412835)
chr1 (168-221)||(1409129-1409182)
chr1 (167-216)||(7230022-7230070)
chr1 (166-199)||(12447532-12447565)
chr1 (172-217)||(21305051-21305096)
chr1 (168-221)||(24981921-24981974)
chr1 (165-230)||(45115168-45115233)
chr1 (166-231)||(50550197-50550262)
chr1 (164-197)||(52879915-52879948)
chr1 (165-217)||(4974122-4974173)
chr1 (165-221)||(13288411-13288467)
chr1 (166-230)||(14214607-14214671)
chr1 (165-221)||(19175595-19175651)
chr1 (169-229)||(28038908-28038968)
chr1 (167-199)||(40328951-40328983)
chr1 (164-216)||(42468868-42468919)
chr1 (165-197)||(47293281-47293313)
[»] chr5 (68 HSPs)
chr5 (165-230)||(3851361-3851426)
chr5 (165-230)||(23914839-23914904)
chr5 (165-228)||(19531378-19531441)
chr5 (165-230)||(42013820-42013885)
chr5 (165-221)||(11262335-11262391)
chr5 (166-221)||(37944609-37944664)
chr5 (166-236)||(19531293-19531363)
chr5 (165-230)||(15712198-15712263)
chr5 (165-230)||(26300109-26300174)
chr5 (165-221)||(35969135-35969192)
chr5 (166-217)||(15712132-15712183)
chr5 (166-221)||(42013900-42013955)
chr5 (166-230)||(3851441-3851505)
chr5 (165-221)||(8961226-8961282)
chr5 (169-217)||(13157344-13157392)
chr5 (167-223)||(35969208-35969264)
chr5 (166-222)||(38835531-38835587)
chr5 (166-221)||(11262406-11262461)
chr5 (166-221)||(37944680-37944735)
chr5 (169-235)||(11795729-11795795)
chr5 (169-230)||(6763778-6763839)
chr5 (165-230)||(13311173-13311237)
chr5 (166-219)||(43446868-43446921)
chr5 (166-230)||(23914919-23914983)
chr5 (166-221)||(13157411-13157465)
chr5 (176-223)||(37870022-37870069)
chr5 (167-221)||(13311253-13311307)
chr5 (169-230)||(38835606-38835668)
chr5 (169-230)||(26300192-26300253)
chr5 (167-223)||(17625719-17625775)
chr5 (166-217)||(8961297-8961348)
chr5 (166-221)||(37870095-37870150)
chr5 (166-216)||(14064888-14064937)
chr5 (184-230)||(43447464-43447510)
chr5 (169-230)||(71257-71318)
chr5 (165-230)||(43506105-43506170)
chr5 (169-221)||(13654589-13654641)
chr5 (167-235)||(25408536-25408604)
chr5 (165-221)||(30893853-30893909)
chr5 (166-230)||(43506172-43506236)
chr5 (167-222)||(3100411-3100466)
chr5 (165-216)||(5226032-5226082)
chr5 (165-216)||(5226096-5226146)
chr5 (166-197)||(11172057-11172088)
chr5 (165-216)||(34186368-34186418)
chr5 (172-230)||(5259469-5259527)
chr5 (165-199)||(20367337-20367371)
chr5 (165-199)||(29807107-29807141)
chr5 (165-199)||(39126091-39126125)
chr5 (165-222)||(1098634-1098691)
chr5 (165-230)||(5259383-5259448)
chr5 (165-214)||(13356214-13356263)
chr5 (169-230)||(13391529-13391590)
chr5 (172-221)||(14153376-14153425)
chr5 (169-230)||(15549406-15549467)
chr5 (172-221)||(20518255-20518304)
chr5 (165-230)||(26141832-26141897)
chr5 (165-221)||(2673854-2673910)
chr5 (169-229)||(8717788-8717848)
chr5 (177-221)||(11172009-11172052)
chr5 (165-197)||(14416437-14416469)
chr5 (165-197)||(14571039-14571071)
chr5 (165-197)||(14571085-14571117)
chr5 (165-221)||(18652842-18652898)
chr5 (167-199)||(20362006-20362038)
chr5 (169-217)||(21945461-21945509)
chr5 (165-221)||(25792923-25792979)
chr5 (167-199)||(36137044-36137076)
[»] chr8 (46 HSPs)
chr8 (165-230)||(14381236-14381301)
chr8 (165-230)||(40098837-40098902)
chr8 (165-221)||(26014576-26014632)
chr8 (166-221)||(14381316-14381371)
chr8 (166-237)||(40098751-40098822)
chr8 (165-230)||(9056098-9056163)
chr8 (165-230)||(33574864-33574929)
chr8 (166-230)||(9056019-9056083)
chr8 (167-230)||(1739644-1739707)
chr8 (165-214)||(7377568-7377617)
chr8 (166-221)||(26014647-26014701)
chr8 (166-221)||(7377632-7377688)
chr8 (166-230)||(11692046-11692109)
chr8 (166-217)||(13211317-13211368)
chr8 (166-221)||(13228877-13228932)
chr8 (166-223)||(9808379-9808436)
chr8 (165-217)||(9808449-9808501)
chr8 (165-221)||(11295671-11295727)
chr8 (169-220)||(5888417-5888468)
chr8 (167-214)||(24418959-24419006)
chr8 (166-221)||(24820375-24820430)
chr8 (165-223)||(29451804-29451865)
chr8 (168-235)||(31810414-31810481)
chr8 (165-230)||(10934680-10934745)
chr8 (165-230)||(13964417-13964482)
chr8 (169-230)||(15232350-15232411)
chr8 (165-230)||(31505115-31505180)
chr8 (169-221)||(10117051-10117103)
chr8 (165-221)||(24820305-24820361)
chr8 (165-221)||(28882671-28882727)
chr8 (165-200)||(13228947-13228982)
chr8 (167-230)||(29424062-29424125)
chr8 (166-197)||(37716152-37716183)
chr8 (165-200)||(43483960-43483995)
chr8 (169-228)||(45045458-45045517)
chr8 (165-199)||(34194589-34194623)
chr8 (165-199)||(40716775-40716809)
chr8 (165-199)||(42631808-42631842)
chr8 (185-230)||(2810030-2810075)
chr8 (165-214)||(7484694-7484743)
chr8 (165-230)||(13211237-13211302)
chr8 (169-221)||(13841855-13841907)
chr8 (169-217)||(15285734-15285782)
chr8 (169-217)||(15466103-15466151)
chr8 (167-223)||(37716079-37716135)
chr8 (165-197)||(44282342-44282374)
[»] chr6 (43 HSPs)
chr6 (166-235)||(21506456-21506525)
chr6 (166-235)||(17773579-17773648)
chr6 (165-236)||(30397717-30397788)
chr6 (165-221)||(17773508-17773564)
chr6 (166-230)||(21998037-21998101)
chr6 (166-230)||(30397802-30397866)
chr6 (166-221)||(21998117-21998172)
chr6 (165-230)||(31536309-31536374)
chr6 (165-221)||(30460690-30460746)
chr6 (165-217)||(4844300-4844352)
chr6 (166-217)||(21506541-21506592)
chr6 (166-217)||(28577679-28577730)
chr6 (166-217)||(30460624-30460675)
chr6 (172-214)||(4844359-4844401)
chr6 (165-235)||(15718470-15718540)
chr6 (169-229)||(16121046-16121106)
chr6 (165-221)||(17268020-17268076)
chr6 (166-221)||(17268091-17268146)
chr6 (175-230)||(28577599-28577654)
chr6 (166-221)||(31536392-31536447)
chr6 (165-235)||(6560650-6560720)
chr6 (165-230)||(7158254-7158319)
chr6 (165-230)||(14310598-14310663)
chr6 (165-230)||(31398224-31398289)
chr6 (169-221)||(13281541-13281593)
chr6 (182-230)||(26527188-26527236)
chr6 (165-221)||(34379812-34379868)
chr6 (165-216)||(28034092-28034142)
chr6 (167-217)||(8363627-8363677)
chr6 (167-221)||(14173397-14173451)
chr6 (167-221)||(14177933-14177987)
chr6 (166-236)||(15836617-15836687)
chr6 (165-199)||(21478582-21478616)
chr6 (167-216)||(3012439-3012488)
chr6 (166-199)||(6047985-6048018)
chr6 (165-198)||(6048033-6048066)
chr6 (165-230)||(13276484-13276549)
chr6 (169-221)||(3203678-3203730)
chr6 (169-221)||(3203752-3203804)
chr6 (170-230)||(8146031-8146091)
chr6 (169-221)||(12383868-12383920)
chr6 (165-221)||(26527267-26527323)
chr6 (166-230)||(33053763-33053827)
[»] chr4 (60 HSPs)
chr4 (166-230)||(52817645-52817709)
chr4 (165-221)||(24941118-24941174)
chr4 (166-235)||(5281213-5281282)
chr4 (165-230)||(5418592-5418657)
chr4 (166-221)||(13689543-13689598)
chr4 (168-230)||(55087791-55087853)
chr4 (166-221)||(5418522-5418577)
chr4 (167-221)||(13689615-13689669)
chr4 (171-221)||(44156083-44156133)
chr4 (165-230)||(19934636-19934701)
chr4 (165-230)||(19934715-19934780)
chr4 (166-219)||(29223951-29224004)
chr4 (165-230)||(54164811-54164876)
chr4 (168-222)||(3504083-3504137)
chr4 (165-235)||(54164890-54164960)
chr4 (169-230)||(4370398-4370459)
chr4 (169-230)||(24941192-24941253)
chr4 (165-221)||(29006912-29006968)
chr4 (166-230)||(52817565-52817629)
chr4 (166-221)||(29006842-29006897)
chr4 (169-223)||(3511714-3511768)
chr4 (167-229)||(5535713-5535775)
chr4 (172-230)||(14450955-14451013)
chr4 (169-223)||(34616296-34616350)
chr4 (167-221)||(38382055-38382109)
chr4 (170-219)||(10031506-10031554)
chr4 (166-219)||(10031599-10031652)
chr4 (167-220)||(11796663-11796716)
chr4 (165-230)||(49481957-49482022)
chr4 (169-221)||(20598264-20598316)
chr4 (165-216)||(9011822-9011872)
chr4 (165-216)||(31860664-31860714)
chr4 (165-200)||(44639823-44639858)
chr4 (165-216)||(45861082-45861132)
chr4 (167-214)||(47181638-47181685)
chr4 (167-214)||(48402425-48402472)
chr4 (167-214)||(56364340-56364387)
chr4 (165-199)||(5289731-5289765)
chr4 (169-219)||(6243706-6243756)
chr4 (164-222)||(19878292-19878350)
chr4 (167-221)||(22020123-22020177)
chr4 (165-199)||(43635865-43635899)
chr4 (169-223)||(47308119-47308173)
chr4 (165-199)||(50038479-50038513)
chr4 (165-199)||(50045701-50045735)
chr4 (166-216)||(53684863-53684912)
chr4 (167-221)||(54106482-54106536)
chr4 (172-230)||(56328534-56328592)
chr4 (184-221)||(2198055-2198092)
chr4 (165-230)||(20215565-20215630)
chr4 (184-221)||(22720602-22720639)
chr4 (169-206)||(29224012-29224049)
chr4 (165-214)||(35005132-35005181)
chr4 (169-214)||(36786164-36786209)
chr4 (165-221)||(4044375-4044431)
chr4 (166-214)||(6462726-6462774)
chr4 (167-199)||(11583786-11583818)
chr4 (165-197)||(20542834-20542866)
chr4 (165-197)||(34827549-34827581)
chr4 (165-221)||(55936064-55936120)
[»] chr3 (72 HSPs)
chr3 (166-221)||(33412543-33412598)
chr3 (166-221)||(42449112-42449167)
chr3 (165-219)||(50260942-50260996)
chr3 (166-236)||(51617323-51617393)
chr3 (166-236)||(52315468-52315538)
chr3 (165-235)||(51617408-51617478)
chr3 (166-215)||(33412478-33412527)
chr3 (165-218)||(52315400-52315453)
chr3 (166-230)||(51239321-51239385)
chr3 (166-217)||(36362682-36362733)
chr3 (165-230)||(21403973-21404036)
chr3 (165-230)||(41349737-41349803)
chr3 (166-223)||(22173800-22173857)
chr3 (165-230)||(29720153-29720218)
chr3 (165-230)||(38455163-38455228)
chr3 (165-230)||(52168281-52168346)
chr3 (166-230)||(29565107-29565171)
chr3 (166-230)||(41349658-41349722)
chr3 (165-221)||(52931648-52931704)
chr3 (166-230)||(52931751-52931815)
chr3 (166-228)||(21403897-21403958)
chr3 (166-235)||(17552470-17552539)
chr3 (165-230)||(36362602-36362667)
chr3 (165-230)||(51239241-51239306)
chr3 (165-230)||(52168360-52168425)
chr3 (165-217)||(29565186-29565238)
chr3 (166-230)||(29720074-29720138)
chr3 (166-230)||(38455243-38455307)
chr3 (166-221)||(22099786-22099841)
chr3 (165-223)||(18940046-18940104)
chr3 (165-218)||(29720226-29720279)
chr3 (166-222)||(18939969-18940025)
chr3 (167-230)||(26367469-26367532)
chr3 (169-235)||(12744894-12744960)
chr3 (165-207)||(17552554-17552596)
chr3 (165-219)||(29512208-29512262)
chr3 (166-235)||(50261011-50261081)
chr3 (165-230)||(25881213-25881278)
chr3 (166-223)||(29512137-29512193)
chr3 (165-221)||(2128438-2128494)
chr3 (165-221)||(8439265-8439321)
chr3 (165-221)||(12744978-12745034)
chr3 (165-221)||(54595797-54595853)
chr3 (165-216)||(26367552-26367603)
chr3 (165-216)||(29076602-29076652)
chr3 (167-230)||(41254010-41254073)
chr3 (166-197)||(52931719-52931750)
chr3 (167-221)||(21217245-21217299)
chr3 (169-219)||(24075526-24075576)
chr3 (165-199)||(32589344-32589378)
chr3 (166-220)||(42449183-42449237)
chr3 (165-199)||(42595814-42595848)
chr3 (167-221)||(44382891-44382945)
chr3 (166-207)||(3972489-3972530)
chr3 (166-207)||(3994564-3994605)
chr3 (166-207)||(3997348-3997389)
chr3 (169-230)||(10872753-10872814)
chr3 (168-221)||(21217173-21217226)
chr3 (169-214)||(29241561-29241606)
chr3 (166-223)||(32759044-32759101)
chr3 (169-214)||(37897696-37897741)
chr3 (164-221)||(50603589-50603646)
chr3 (165-230)||(52215957-52216022)
chr3 (166-199)||(54680518-54680551)
chr3 (170-214)||(1086591-1086635)
chr3 (169-221)||(12568465-12568517)
chr3 (169-221)||(13544929-13544981)
chr3 (169-221)||(26104781-26104833)
chr3 (166-230)||(30519676-30519740)
chr3 (167-223)||(31706618-31706674)
chr3 (183-223)||(39579588-39579628)
chr3 (168-216)||(40628746-40628793)
[»] chr2 (71 HSPs)
chr2 (165-230)||(5574187-5574252)
chr2 (169-230)||(34248496-34248557)
chr2 (167-221)||(34248422-34248476)
chr2 (166-235)||(38598018-38598087)
chr2 (167-235)||(3887826-3887894)
chr2 (166-230)||(3887911-3887975)
chr2 (166-230)||(38594422-38594486)
chr2 (165-221)||(43426635-43426691)
chr2 (168-221)||(6566995-6567048)
chr2 (165-221)||(30902350-30902406)
chr2 (166-221)||(1981062-1981117)
chr2 (165-230)||(1980983-1981048)
chr2 (166-219)||(30902282-30902335)
chr2 (165-230)||(38594342-38594407)
chr2 (165-230)||(38597938-38598003)
chr2 (166-230)||(5574108-5574172)
chr2 (169-221)||(20504250-20504302)
chr2 (167-218)||(3714223-3714274)
chr2 (167-221)||(27331838-27331892)
chr2 (167-221)||(44274620-44274674)
chr2 (165-221)||(22373687-22373744)
chr2 (167-223)||(13333452-13333508)
chr2 (166-230)||(38618176-38618240)
chr2 (166-230)||(43426706-43426770)
chr2 (166-237)||(14308650-14308721)
chr2 (166-217)||(25278185-25278236)
chr2 (167-221)||(25270863-25270917)
chr2 (165-226)||(1961386-1961447)
chr2 (166-223)||(3714291-3714347)
chr2 (169-214)||(26003516-26003561)
chr2 (173-221)||(7837092-7837140)
chr2 (169-221)||(22373617-22373669)
chr2 (167-219)||(26836234-26836286)
chr2 (165-221)||(31024178-31024234)
chr2 (169-221)||(38465870-38465922)
chr2 (167-223)||(41056893-41056949)
chr2 (167-230)||(14308725-14308788)
chr2 (169-200)||(20504324-20504355)
chr2 (167-222)||(41824267-41824322)
chr2 (167-221)||(3123982-3124036)
chr2 (169-223)||(11342051-11342105)
chr2 (172-230)||(19612939-19612997)
chr2 (165-235)||(24457093-24457163)
chr2 (165-199)||(27743693-27743727)
chr2 (165-235)||(38465782-38465852)
chr2 (165-199)||(42579096-42579130)
chr2 (166-199)||(921845-921878)
chr2 (168-221)||(3098206-3098259)
chr2 (177-230)||(3121511-3121564)
chr2 (172-221)||(8740526-8740575)
chr2 (169-230)||(15119858-15119919)
chr2 (169-214)||(15859632-15859677)
chr2 (167-216)||(17866259-17866308)
chr2 (166-199)||(20195318-20195351)
chr2 (165-214)||(21183404-21183453)
chr2 (168-221)||(25270936-25270989)
chr2 (165-198)||(28680916-28680949)
chr2 (166-199)||(29771747-29771780)
chr2 (168-221)||(41056968-41057021)
chr2 (169-221)||(6566922-6566974)
chr2 (165-221)||(15119784-15119840)
chr2 (165-217)||(21488104-21488156)
chr2 (169-221)||(23143567-23143619)
chr2 (169-221)||(23555357-23555409)
chr2 (165-197)||(32473502-32473534)
chr2 (165-197)||(36490510-36490542)
chr2 (169-237)||(38181841-38181909)
chr2 (195-223)||(38618119-38618147)
chr2 (165-221)||(41824337-41824393)
chr2 (165-221)||(44587720-44587776)
chr2 (167-223)||(45472415-45472471)
[»] scaffold0024 (2 HSPs)
scaffold0024 (165-237)||(120136-120208)
scaffold0024 (166-230)||(120223-120287)
[»] chr7 (67 HSPs)
chr7 (166-230)||(38238862-38238926)
chr7 (166-230)||(46943942-46944006)
chr7 (166-221)||(25079214-25079269)
chr7 (165-235)||(29498776-29498846)
chr7 (169-230)||(34703524-34703585)
chr7 (169-221)||(40416987-40417039)
chr7 (166-221)||(25079285-25079340)
chr7 (167-221)||(4406424-4406478)
chr7 (165-230)||(38238781-38238847)
chr7 (166-235)||(22106745-22106814)
chr7 (166-235)||(40529537-40529606)
chr7 (165-221)||(22106674-22106730)
chr7 (166-230)||(27554575-27554639)
chr7 (165-221)||(40529621-40529677)
chr7 (165-235)||(6455626-6455696)
chr7 (167-221)||(21387583-21387637)
chr7 (166-219)||(716312-716365)
chr7 (164-229)||(2456335-2456400)
chr7 (166-230)||(1706831-1706895)
chr7 (169-221)||(1706914-1706966)
chr7 (165-221)||(41872128-41872184)
chr7 (165-221)||(45000678-45000734)
chr7 (166-221)||(18234423-18234478)
chr7 (169-228)||(22281443-22281502)
chr7 (166-217)||(29498861-29498912)
chr7 (165-219)||(24936610-24936664)
chr7 (182-230)||(4407713-4407761)
chr7 (166-230)||(40416904-40416968)
chr7 (166-217)||(7430962-7431013)
chr7 (166-221)||(27554504-27554559)
chr7 (166-217)||(34703454-34703505)
chr7 (167-217)||(46944016-46944066)
chr7 (167-220)||(7701267-7701320)
chr7 (165-230)||(12274807-12274872)
chr7 (165-230)||(25245220-25245285)
chr7 (166-215)||(45000614-45000663)
chr7 (165-221)||(2943219-2943275)
chr7 (165-221)||(34275198-34275254)
chr7 (166-217)||(24936544-24936595)
chr7 (166-221)||(31417595-31417650)
chr7 (167-214)||(34840628-34840675)
chr7 (165-199)||(3498323-3498357)
chr7 (172-230)||(6455547-6455605)
chr7 (163-221)||(10599067-10599125)
chr7 (167-221)||(11602846-11602900)
chr7 (167-217)||(22281522-22281572)
chr7 (173-235)||(24935885-24935947)
chr7 (167-221)||(25774261-25774315)
chr7 (165-211)||(43813202-43813248)
chr7 (167-221)||(46022555-46022609)
chr7 (164-221)||(3967781-3967838)
chr7 (165-230)||(4406077-4406142)
chr7 (168-221)||(7701195-7701248)
chr7 (165-230)||(10095717-10095782)
chr7 (165-230)||(10415016-10415081)
chr7 (169-230)||(15051081-15051142)
chr7 (165-230)||(28949352-28949417)
chr7 (166-199)||(46658810-46658843)
chr7 (169-197)||(716265-716293)
chr7 (167-219)||(8169175-8169227)
chr7 (167-199)||(20353156-20353188)
chr7 (169-221)||(23818431-23818483)
chr7 (169-221)||(24280902-24280954)
chr7 (169-221)||(31813418-31813470)
chr7 (165-197)||(33471521-33471553)
chr7 (169-197)||(36427748-36427776)
chr7 (165-217)||(41508687-41508738)
[»] scaffold0039 (2 HSPs)
scaffold0039 (165-223)||(54465-54523)
scaffold0039 (169-219)||(54397-54447)
[»] scaffold0047 (2 HSPs)
scaffold0047 (166-235)||(61156-61225)
scaffold0047 (165-230)||(61239-61304)
[»] scaffold0007 (2 HSPs)
scaffold0007 (165-221)||(246802-246858)
scaffold0007 (169-230)||(246876-246937)
[»] scaffold0536 (2 HSPs)
scaffold0536 (165-230)||(3948-4013)
scaffold0536 (166-230)||(4028-4092)
[»] scaffold0027 (1 HSPs)
scaffold0027 (166-230)||(17165-17228)
[»] scaffold0236 (1 HSPs)
scaffold0236 (165-199)||(13724-13758)
[»] scaffold0009 (1 HSPs)
scaffold0009 (172-221)||(7741-7790)
[»] scaffold0200 (1 HSPs)
scaffold0200 (168-216)||(22315-22362)
[»] scaffold0020 (1 HSPs)
scaffold0020 (165-221)||(139373-139429)


Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 165 - 463
Target Start/End: Complemental strand, 17490551 - 17490253
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattatgtgtatttgatcatggttgatagctct 264  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  17490551 ccacatatatcattaattaaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtctattatgtgtatttgatcatggttgatagctct 17490452  T
Q  265 atttttaatgctgcttaatcccatttaggcacaagttacaatatttcaaagtgatttatccaaatatctcagtgtacatttaacttgagttagatgcatt 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17490451 atttttaatgctgcttaatcccatttaggcacaagttacaatatttcaaagtgatttatccaaatatctcagtgtacatttaacttgagttagatgcatt 17490352  T
Q  365 aggcttgggcaactgtttgcgtgctcaaaatttgtatttaatttgactgtaagtgtacatttgaccggctattgtcagttactaggtccataatttagc 463  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17490351 aggcttgggcaactgtttgcttgctcaaaatttgtatttaatttgattgtaagtgtacatttgaccggctattgtcagttactatgtccataatttagc 17490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 639862 - 639797
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  639862 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 639797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 33604068 - 33604133
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  33604068 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 33604133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 48022658 - 48022593
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  48022658 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 48022593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 37734853 - 37734920
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  37734853 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtatt 37734920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 6065538 - 6065603
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||    
T  6065538 ccacatacatcattaattgaatgtatctaaagagtggatttttgcttatattagtgaccggagggt 6065603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 8258020 - 8258085
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  8258020 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 8258085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 31008338 - 31008401
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  31008338 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattaatgaccggagggt 31008401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 5856434 - 5856492
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5856434 ccacatacataattaattgaatgtatttaaaaagtggatttttgcttatattagtgatc 5856492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 23944100 - 23944035
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | ||||||    
T  23944100 ccacatacatcattaattgaatgtatctaaaaaatgaatttttgcttatattagtgaccggagggt 23944035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 27206820 - 27206767
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 220  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27206820 acatacatcattaattgaatgtatctaaaaagtggttttttgcttatattagtg 27206767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 31008322 - 31008257
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  31008322 ccacatacatcattaattaaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 31008257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 3384285 - 3384221
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||    
T  3384285 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattaatgaccggagggt 3384221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 35367556 - 35367620
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||||    
T  35367556 cacatacatcattaattgaatgtatctaaaaaatggatttttgcttatagtagtgaccggagggt 35367620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 37734835 - 37734780
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  37734835 cacatacatcattaattgaatgtatcttaaaagtgaatttttgcttatattagtga 37734780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 27206839 - 27206901
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  27206839 catacatcattaattgaatgtatctaaatagttgatttttgcttatattagtgaccggagggt 27206901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 4060234 - 4060178
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  4060234 ccacatatattattaattgaatatatctaaaaagtggatttttgcttatattagtga 4060178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6065523 - 6065459
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||||||||||| | ||||||    
T  6065523 cacatccatcattaattgaatgtatctaaaaagtagaattttgcttatattagtgaccggagggt 6065459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 8258005 - 8257941
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||    
T  8258005 cacatacattattaattgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggt 8257941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 14418135 - 14418199
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| | ||||||    
T  14418135 cacatacatcattagttgaatgtatctaaaaagtgaatttttgcttatattaatgaccggagggt 14418199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 2349818 - 2349763
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  2349818 cacatgcatcattaattgaatgtatctaaaaaatggatttttgtttatattagtga 2349763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 4602706 - 4602651
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  4602706 cacatatatcattaattgaatgtatctaaaaagtggaattttgtttatattagtga 4602651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 34658448 - 34658393
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  34658448 cacatacatcattaattaaatgtatctgaaaagtgaatttttgcttatattagtga 34658393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 40262530 - 40262475
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  40262530 cacatacatcattaattgaatatatctaaaaactggatttttgtttatattagtga 40262475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 2352973 - 2353030
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||    
T  2352973 cacatacatcattaattaaatgtatctaaaaaataaatttttgcttatattagtgatc 2353030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 4060252 - 4060313
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  4060252 atacatcattagttaaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 4060313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 639877 - 639941
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  639877 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggt 639941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 1035948 - 1035892
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||    
T  1035948 acatacatcatttattgaatgaatctagaaactggatttttgcttatattagtgatc 1035892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 4602721 - 4602777
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||| ||||||||||||||||||||||||| || |||||| |||||||||||||    
T  4602721 ccacatatatcattaattgaatgtatctaaaaaatgaatttttacttatattagtga 4602777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 5431417 - 5431473
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||    
T  5431417 ccacatacatcatttattgaatgaatctaaaaagttaatttttgcttatattagtga 5431473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 19175665 - 19175721
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  19175665 ccacatacatcatttattgaatgaatctaaaaagtagatttttgcttataatagtga 19175721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 48022673 - 48022737
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  48022673 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggt 48022737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 3384301 - 3384356
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||    
T  3384301 cacatacatcatcaattgaatgtatctaaaaagtgaatttttatttatattagtga 3384356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 1035967 - 1036029
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||| ||||||||||||||| ||||| |||||| |||||||||||||||||||| | ||||||    
T  1035967 cataaatcattaattgaatgaatctagaaagtgaatttttgcttatattagtgaccggagggt 1036029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 10256844 - 10256786
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||||| |||||||| |||||||||||| |||||| |||||| ||||||||    
T  10256844 ccacatacatcatttattgaatgaatctaaaaagtgaattttttcttataatagtgatc 10256786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 34597583 - 34597525
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||||||||| ||||||||    
T  34597583 ccacatacatcatttgttgaatgaatctaaaaagtgaatttttgcttataatagtgatc 34597525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 40262545 - 40262608
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||| | ||||||    
T  40262545 ccacatacatcattaattaaatgtatttaaa--gtggatttttgcttatattagtgaccggagggt 40262608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 15439939 - 15439991
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||||||||||    
T  15439939 ccacatacattattaattgaatgtatttaaaaagtcaatttttgcttatatta 15439991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 33604053 - 33603989
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||| ||||||||||| ||||||| ||||||| |||||||||||| | ||||||    
T  33604053 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgtttatattagtgaccggagggt 33603989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 52923401 - 52923465
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||| |||||||| | ||||||||| |||||||||||||| |||||| | ||||||    
T  52923401 cacatacatcatttattgaatgaacctaaaaagtagatttttgcttataatagtgacctgagggt 52923465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 2349835 - 2349890
Alignment:
Q  167 acatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||    
T  2349835 acatacatcattaattgaatgtatctaaaaaaatagatttttacttatattagtga 2349890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 15439924 - 15439869
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| ||||||||||||||||||||| ||| | |||||||| ||||||||||||    
T  15439924 cacatatatcattaattgaatgtatctacaaaatagatttttgtttatattagtga 15439869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 2352954 - 2352916
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggattttt 207  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  2352954 atacgtcattaattgaatgtatctaaaaagtggattttt 2352916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 5431402 - 5431348
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| ||||| |||||||| |||||||||||| ||||||||||||| ||||||    
T  5431402 acatacttcatttattgaatgaatctaaaaagtgaatttttgcttataatagtga 5431348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 6079142 - 6079196
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||||| |||||||| |||||||||| |||||| ||||||    
T  6079142 acatacatcatttattgaatgaatctaaaaggtggattttttcttataatagtga 6079196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 6156693 - 6156639
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||    
T  6156693 atacatcatttattgaatgaatctaaaaagttgatttttgtttataatagtgatc 6156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 15351792 - 15351857
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| ||||||||  | |||||||||||||||| |||| | ||||||    
T  15351792 ccacatacatcatttattgaatgaatctaaaacatagatttttgcttatatttgtgaccagagggt 15351857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 34597590 - 34597639
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||||||||    
T  34597590 ccacatacatcatttgttgaatgaatctaaaaagtgaatttttgcttata 34597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 34953977 - 34954038
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||| ||||||||  |  ||||||||||||| |||||||| ||||||    
T  34953977 atacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgatcggagggt 34954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 36040209 - 36040144
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  36040209 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 36040144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 36535750 - 36535717
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtg 200  Q
    ||||||||||||||||||||||||||||||||||    
T  36535750 acatacatcattaattgaatgtatctaaaaagtg 36535717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 52923386 - 52923321
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| | |||||||||| | ||||||||||| |||||| | ||||||    
T  52923386 ccacatacatcatttattgaatgaacctaaaaagtgaaattttgcttataatagtgaccggagggt 52923321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 2122646 - 2122702
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| |||| | |||||| ||||||||| |||||||||||||||| ||||||    
T  2122646 ccacatacaacatttaatgaatgaatctaaaaaatggatttttgcttataatagtga 2122702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 6283612 - 6283668
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| |||||| | |||||| || | |||||||||||||||||||    
T  6283612 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtga 6283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 14214603 - 14214543
Alignment:
Q  175 cattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||| | |||||| ||||    
T  14214603 cattaattgaatgaacctaaaaagtgaatttttgcttataatagtgaccggagggtgtatt 14214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 14967303 - 14967359
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    ||||||||||||| | |||||| |||||||| || |||||||||||||| |||||||    
T  14967303 cacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgat 14967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 35367018 - 35366962
Alignment:
Q  181 ttgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 237  Q
    ||||||||||||||||| | |||||||  |||||||||||||| |||||| ||||||    
T  35367018 ttgaatgtatctaaaaattagatttttatttatattagtgatcggagggtgtattat 35366962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 52112939 - 52112883
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| || ||||||||| | ||||||||||| ||||||    
T  52112939 ccacatacatcatttattgaatgaatataaaaagtgaacttttgcttataatagtga 52112883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 9135595 - 9135645
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  9135595 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 9135645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 15057720 - 15057657
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 228  Q
    |||||||||||| | ||| |||| ||||||||||| | |||||||||||| |||||||| ||||    
T  15057720 ccacatacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtgatcggagg 15057657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 45925307 - 45925257
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  45925307 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 45925257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 46906940 - 46906987
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  46906940 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 46906987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 3549834 - 3549788
Alignment:
Q  173 atcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||||||||| |||||||| || |||||||||||||| ||||    
T  3549834 atcattaattgaatgaatctaaaatgtagatttttgcttataatagt 3549788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 3606324 - 3606290
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  3606324 ccacatacatcattaattgaatgaatctaaaaagt 3606290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 8338731 - 8338673
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  8338731 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 8338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 19580249 - 19580183
Alignment:
Q  163 atccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 229  Q
    |||||||||||||||| |||||||| || | ||||||  ||||||||||||| | |||||| |||||    
T  19580249 atccacatacatcatttattgaatgaattttaaaagtcaatttttgcttataatcgtgatcggaggg 19580183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 24981902 - 24981848
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| | ||||||||||||||| ||  ||||||||||||| ||||||    
T  24981902 acatacatcatttaatgaatgtatctaaaacgttaatttttgcttataatagtga 24981848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 34658463 - 34658513
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 215  Q
    |||||||||| ||||||||||||||| |||||| | || ||||||||||||    
T  34658463 ccacatacattattaattgaatgtatttaaaaaatagaattttgcttatat 34658513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 37255189 - 37255155
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  37255189 ccacatacatcattaattgaatgaatctaaaaagt 37255155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 39181112 - 39181078
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  39181112 ccacatacatcattaattgaatgaatctaaaaagt 39181078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 39940565 - 39940627
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 229  Q
    |||||||| ||| |||||||| |||||||||||  |||||| |||||| |||||||| |||||    
T  39940565 acatacattatttattgaatgaatctaaaaagtaaatttttacttataatagtgatcggaggg 39940627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 45115254 - 45115312
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  45115254 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 45115312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 46412769 - 46412835
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||||||||||||| ||| |||| ||  |||||| |||||| |||||||| |||||| ||||    
T  46412769 atacatcattaattgaatgaatccaaaatgtaaatttttacttataatagtgatcggagggtgtatt 46412835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 1409129 - 1409182
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||| |||||||| ||||||||||   ||||||||||||| ||||||    
T  1409129 catacatcatttattgaatgaatctaaaaagataatttttgcttataatagtga 1409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 7230070 - 7230022
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    ||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  7230070 acatacatcattaattgaatgaatctaaaaagt-taattttgcttatatt 7230022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 12447532 - 12447565
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagt 199  Q
    |||||||||||||||||||||| |||||||||||    
T  12447532 cacatacatcattaattgaatgaatctaaaaagt 12447565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 21305096 - 21305051
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||    
T  21305096 catcattaattgaatgtatctaaaaaatgaatttttatttatatta 21305051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 24981921 - 24981974
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  24981921 catacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 24981974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 45115233 - 45115168
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||| |||||||| |||||  | ||||||  | ||||||||||||||||||||||| ||||||    
T  45115233 ccacatatatcattaaatgaataaacctaaaatatagatttttgcttatattagtgatcggagggt 45115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 50550197 - 50550262
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtc 231  Q
    ||||||||||||| | |||||| |||||||| || |||||||  ||||| |||||||| |||||||    
T  50550197 cacatacatcatttaatgaatgaatctaaaatgttgatttttctttataatagtgatcggagggtc 50550262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 52879948 - 52879915
Alignment:
Q  164 tccacatacatcattaattgaatgtatctaaaaa 197  Q
    |||||||||||||||||||||||| |||||||||    
T  52879948 tccacatacatcattaattgaatgaatctaaaaa 52879915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 4974122 - 4974173
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||| |||||| |||||||||||  | ||||||||||||||    
T  4974122 ccacatacatcattaaatgaatgaatctaaaaagt-caattttgcttatatta 4974173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 13288411 - 13288467
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||  || || |||||| ||||||||||||| ||||||    
T  13288411 ccacatacatcatttattgaataaatttataaagtgcatttttgcttataatagtga 13288467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 14214607 - 14214671
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||| |||||||| | |||||||||   |||||||||||| |||||| | ||||||    
T  14214607 cacatacatcatttattgaatgaacctaaaaagtaagtttttgcttataatagtgaccggagggt 14214671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 19175651 - 19175595
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| | |||||||||| | |||| |||||| ||||||    
T  19175651 ccacatacatcatttattgaatgaacctaaaaagtgaaattttacttataatagtga 19175595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 28038908 - 28038968
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 229  Q
    |||||||||| | | |||| ||||||||||| |||||||||||||| |||| ||| |||||    
T  28038908 atacatcatttaataaatgaatctaaaaagttgatttttgcttataatagtaatcggaggg 28038968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 40328951 - 40328983
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||| |||||||||||    
T  40328951 acatacatcattaattgaatgaatctaaaaagt 40328983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 42468919 - 42468868
Alignment:
Q  164 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    ||||||||||||||||| |||||| | ||||||||| || |||||||||||||    
T  42468919 tccacatacatcattaaatgaatgaacctaaaaagt-gaattttgcttatatt 42468868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 47293313 - 47293281
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  47293313 ccacatacatcattaattgaatgaatctaaaaa 47293281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 3851426 - 3851361
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3851426 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatcggagggt 3851361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 23914904 - 23914839
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  23914904 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 23914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 19531378 - 19531441
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 228  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  19531378 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgatcggagg 19531441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 42013885 - 42013820
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  42013885 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 42013820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 11262391 - 11262335
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11262391 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 11262335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 37944664 - 37944609
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37944664 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 37944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 19531363 - 19531293
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 236  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||||| |||||    
T  19531363 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggtgtatta 19531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 15712198 - 15712263
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||    
T  15712198 ccacatacatcattaattgaatgtatttaaaaagttgatttttgcttatattaatgatcggagggt 15712263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 26300174 - 26300109
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  26300174 ccacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 26300109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 35969192 - 35969135
Alignment:
Q  165 ccacatacatcattaatt-gaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35969192 ccacatacatcattaatttgaatgtatctaaaaagtggatttttgcttatattagtga 35969135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 15712183 - 15712132
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15712183 cacatacatcattaattgaatgtatctaaaaaatggatttttgcttatatta 15712132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 42013900 - 42013955
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  42013900 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatatttgtga 42013955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 3851441 - 3851505
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||| | ||||||    
T  3851441 cacatacatcattaattaaatgtatctaaaaaatgaatttttgcttatattagtgaccggagggt 3851505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 8961282 - 8961226
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  8961282 ccacatacattattaattgaatgtatctaaagagtgaatttttgcttatattagtga 8961226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 13157392 - 13157344
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13157392 atacatcattaattgaatatatctaaaaagtggatttttgcttatatta 13157344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 35969208 - 35969264
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  35969208 acatacaccattaattgaatgtatctaaaaagtgaatttttacttatattagtgatc 35969264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 38835587 - 38835531
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  38835587 cacatacatcattaattaaatgtatctaaaaaatgaatttttgcttatattagtgat 38835531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 11262406 - 11262461
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  11262406 cacatacatcattaattgaatgtatctacaaaatgaatttttgcttatattagtga 11262461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 37944680 - 37944735
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  37944680 cacatacatcattaattgaatgtatctaaaaaataaatttttgcttatattagtga 37944735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 11795795 - 11795729
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||||||||| | |||||| ||||    
T  11795795 atacatcattaattgaatgaatctaaaatgttgatttttgcttatattagtgaccggagggtatatt 11795729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 6763778 - 6763839
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| | ||||||    
T  6763778 atacatcattaattgaatgaatctagaaaatggatttttgcttatattagtgaccggagggt 6763839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 13311237 - 13311173
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||| |||||| || |||||||||||||||||| | ||||||    
T  13311237 ccacatacatcattaattgaatgtatct-aaaagtagacttttgcttatattagtgaccggagggt 13311173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 43446921 - 43446868
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  43446921 cacatacatcattaattaaatgtatctaaaaagtaaatttttgcttatattagt 43446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 23914919 - 23914983
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  23914919 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggt 23914983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 13157411 - 13157465
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  13157411 cacatacatcattaattgaatgttt-taaaaagtgaatttttgcttatattagtga 13157465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 37870069 - 37870022
Alignment:
Q  176 attaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37870069 attaattgaatgtatctaaaaaatggttttttgcttatattagtgatc 37870022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 13311253 - 13311307
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||  | ||||||| |||||||||||||    
T  13311253 acatacatcattaattgaatgtatctaaaagatagatttttacttatattagtga 13311307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 38835606 - 38835668
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtgga-tttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||| | ||||||    
T  38835606 atacatcattaattgaatgtatttaaaaagtgaattttttgcttatattagtgaccagagggt 38835668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 26300192 - 26300253
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||  | |||| ||||||||||||| | ||||||    
T  26300192 atacatcattaattgaatgtatctaaaaagtaaaattttacttatattagtgaccggagggt 26300253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 17625719 - 17625775
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||||    
T  17625719 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 17625775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 8961297 - 8961348
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| ||||||||    
T  8961297 cacatacatcattaattgaatgtatttaaacagtagatttttgtttatatta 8961348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 37870095 - 37870150
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||| ||||||||||||||| ||||||||||   |||||||||||||||||||||    
T  37870095 cacattcatcattaattgaatatatctaaaaatgagatttttgcttatattagtga 37870150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 14064888 - 14064937
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  14064888 cacatacatcattaattgaatgaatctaaaaagt-aatttttgcttatatt 14064937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 43447464 - 43447510
Alignment:
Q  184 aatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||||    
T  43447464 aatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 43447510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 71318 - 71257
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||| |||||| | ||||||    
T  71318 atacatcattaattgaatgaatctaaaatatagatttttgcttataatagtgaccggagggt 71257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 43506170 - 43506105
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| | ||| || |||||||||||| | ||||||||||| |||||| ||||||||    
T  43506170 ccacatacatcatttaatgattgaatctaaaaagtgaaattttgcttataatagtgacccgagggt 43506105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 13654589 - 13654641
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| |||||||| || ||||||||| ||||||||||||| ||||||    
T  13654589 atacatcatttattgaatgaatttaaaaagtgaatttttgcttataatagtga 13654641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 25408604 - 25408536
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| |||| | |||||| ||||    
T  25408604 acatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgtgaccggagggtgtatt 25408536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 30893853 - 30893909
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| ||||||||  ||||||||| |||||||| ||||    
T  30893853 ccacatacatcatttattgaatgaatctaaaacatggattttttcttatatttgtga 30893909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 43506172 - 43506236
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||| | |||||| |||||||||||| | ||||||||||| |||||| | ||||||    
T  43506172 cacatacatcatttaatgaatgaatctaaaaagtgaaattttgcttataatagtgaccagagggt 43506236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 3100466 - 3100411
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    |||||||||||| |||||||| |||||||| ||  ||||||||||||| |||||||    
T  3100466 acatacatcatttattgaatgaatctaaaatgttaatttttgcttataatagtgat 3100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 5226082 - 5226032
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  5226082 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 5226032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 5226096 - 5226146
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  5226096 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 5226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 197
Target Start/End: Original strand, 11172057 - 11172088
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||||||||||||    
T  11172057 cacatacatcattaattgaatgtatctaaaaa 11172088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 34186418 - 34186368
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||||||||    
T  34186418 ccacatacatcattaattgaatgaacctaaaaagt-catttttgcttatatt 34186368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 5259469 - 5259527
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||| |||||||| || | ||||||||||||||||||| | ||||||    
T  5259469 catcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggt 5259527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 20367371 - 20367337
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  20367371 ccacatacatcattaattgaatgaatctaaaaagt 20367337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 29807141 - 29807107
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  29807141 ccacatacatcattaattgaatgaatctaaaaagt 29807107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 39126091 - 39126125
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  39126091 ccacatacatcattaattgaatgaatctaaaaagt 39126125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 1098691 - 1098634
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    |||||||||||||| |||||||| |||||||||||  | |||| |||||| |||||||    
T  1098691 ccacatacatcatttattgaatgaatctaaaaagtcaacttttacttataatagtgat 1098634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 5259448 - 5259383
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| | ||||||  | | ||||||||||||||||||| | ||||||    
T  5259448 ccacatacatcattaaatgaatgaacctaaaatatagttttttgcttatattagtgaccggagggt 5259383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 13356214 - 13356263
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||||| |||||||| |  |||||||| ||||||||||||||    
T  13356214 ccacatacatcatttattgaatgaacttaaaaagtagatttttgcttata 13356263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 13391590 - 13391529
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||||||| ||||||||||| || |||| |||||| |||||| | ||||||    
T  13391590 atacatcatttattgaatgaatctaaaaagttgacttttacttataatagtgaccagagggt 13391529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 14153425 - 14153376
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| |||||| || |||||||| |||||||||||||| ||||||    
T  14153425 catcattaaatgaatgaatataaaaagtagatttttgcttataatagtga 14153376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 15549406 - 15549467
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||| |||||||||||| |||||||| || |||||||| ||||| |||||| | ||||||    
T  15549406 atacattattaattgaatgaatctaaaatgttgatttttgtttataatagtgaccggagggt 15549467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 20518255 - 20518304
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| |||||| || |||||||| |||||||||||||| ||||||    
T  20518255 catcattaaatgaatgaatgtaaaaagtagatttttgcttataatagtga 20518304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 26141832 - 26141897
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| ||||| ||  | | ||||||||||||||||||| | ||||||    
T  26141832 ccacatacatcattaaatgaatgaatctagaatatagttttttgcttatattagtgaccggagggt 26141897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 2673910 - 2673854
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||||| |||||||||  |  |||||||||| ||||||    
T  2673910 ccacatacatcatttattgaatgtacctaaaaagtcaaaatttgcttataatagtga 2673854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 8717788 - 8717848
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 229  Q
    |||||| ||| |||||||| | ||||||| | |||||||||||||| |||||||| |||||    
T  8717788 atacattatttattgaatgaacctaaaaatttgatttttgcttataatagtgatcggaggg 8717848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 11172052 - 11172009
Alignment:
Q  177 ttaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  11172052 ttaattgaatgtatctaaaaa-taaatttttgcttatattagtga 11172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 14416469 - 14416437
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  14416469 ccacatacatcattaattgaatgaatctaaaaa 14416437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 14571071 - 14571039
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  14571071 ccacatacatcattaattgaatgaatctaaaaa 14571039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 14571085 - 14571117
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  14571085 ccacatacatcattaattgaatgaatctaaaaa 14571117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 18652842 - 18652898
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| |||||||| || |||||||| ||||| ||||||    
T  18652842 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgtttataatagtga 18652898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 20362038 - 20362006
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||| |||||||||||    
T  20362038 acatacatcattaattgaatgaatctaaaaagt 20362006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 21945461 - 21945509
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||| |||| |||||||| ||||||  ||||||||    
T  21945461 atacatcattaattgaatatatcaaaaaagtgaatttttatttatatta 21945509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 25792923 - 25792979
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| | |||||||||  ||||||||||||| ||||||    
T  25792923 ccacatacatcatttaatgaatgaacctaaaaagtaaatttttgcttataatagtga 25792979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 36137076 - 36137044
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||| |||||||||||    
T  36137076 acatacatcattaattgaatgaatctaaaaagt 36137044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 14381301 - 14381236
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  14381301 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 14381236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 40098837 - 40098902
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  40098837 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 40098902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 26014632 - 26014576
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26014632 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 26014576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 14381316 - 14381371
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14381316 cacatacatcattaattgaatgtatctaaaaagtggatttttgtttatattagtga 14381371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 40098822 - 40098751
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 237  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||||    
T  40098822 cacatatatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtattat 40098751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 9056098 - 9056163
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | ||||||    
T  9056098 ccacatacatcattaattaaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 9056163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 33574864 - 33574929
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  33574864 ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagtgaccggagggt 33574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 9056083 - 9056019
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | ||||||    
T  9056083 cacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggt 9056019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 1739644 - 1739707
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  1739644 acatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 1739707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 7377617 - 7377568
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7377617 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttata 7377568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 26014647 - 26014701
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  26014647 cacatacattattaattga-tgtatctaaaaagtggatttttgcttatattagtga 26014701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 7377632 - 7377688
Alignment:
Q  166 cacatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  7377632 cacatacatcattaattgaatgtatctaaaaaaatgaatttttgcttatattagtga 7377688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 11692109 - 11692046
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||| | ||||||    
T  11692109 cacatacatcattaatt-aatgtgtctaaaaagtggatttttgtttatattagtgaccggagggt 11692046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 13211317 - 13211368
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  13211317 cacatacatcattaattgaatgtatctaaaaaatagatttttacttatatta 13211368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 13228932 - 13228877
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| |||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  13228932 cacatatatcattaattgaatgtatttaaaaaatggatttttgtttatattagtga 13228877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 9808436 - 9808379
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||| |||||||||||||||| ||||||||  ||||||| ||||||||||||||    
T  9808436 cacatacaccattaattgaatgtatataaaaagtaaatttttgtttatattagtgatc 9808379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 9808449 - 9808501
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||| ||||||| |||||||||||||| || ||||||||||||||||    
T  9808449 ccacatacataattaattaaatgtatctaaaaaatgaatttttgcttatatta 9808501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 11295727 - 11295671
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  11295727 ccacatacatcatttaatgaatgtatctaaaatgttgatttttgcttataatagtga 11295671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 5888417 - 5888468
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 220  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  5888417 atacatcattaattgaatgaatctacaaagtagatttttgcttataatagtg 5888468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 24418959 - 24419006
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||||    
T  24418959 acatacatcatttattgaatgaatctaaaaagtgaatttttgcttata 24419006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 24820375 - 24820430
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||    
T  24820375 cacatacatcatttattgaatgaatctaaaaagagaatttttgcttataatagtga 24820430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 29451804 - 29451865
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaag---tggatttttgcttatattagtgatc 223  Q
    |||||||||| ||||||||||||||| ||||||    |||||||||||||||||||||||||    
T  29451804 ccacatacattattaattgaatgtatttaaaaaaaaatggatttttgcttatattagtgatc 29451865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 31810414 - 31810481
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||||||| |||||| |||||||| || | ||||||||||||||||||| | |||||| ||||    
T  31810414 catacatcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggtgtatt 31810481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 10934680 - 10934745
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  10934680 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggt 10934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 13964482 - 13964417
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| || ||||| || |||||||||||||| |||||| | ||||||    
T  13964482 ccacatacatcatttattgaatgaatttaaaatgttgatttttgcttataatagtgaccagagggt 13964417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 15232350 - 15232411
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||| || || |||||||| ||||| |||||| ||||||| ||||||    
T  15232350 atacatcattaattgaatgaatttagaaagtggaattttgtttatatcagtgatcggagggt 15232411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 31505115 - 31505180
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  31505115 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 31505180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 10117051 - 10117103
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||    
T  10117051 atacatcattaattgaatgaatctaaaatgtaaatttttgcttataatagtga 10117103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 24820361 - 24820305
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| | |||| ||||| ||||||||||||| ||||||    
T  24820361 ccacatacatcatttattgaatgaacctaagaagtgaatttttgcttataatagtga 24820305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 28882727 - 28882671
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| ||||||||||| || ||||||| ||| ||||||    
T  28882727 ccacatacatcatttattgaatgaatctaaaaagtagacttttgctcataatagtga 28882671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 200
Target Start/End: Original strand, 13228947 - 13228982
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtg 200  Q
    |||||||||||||||||| |||||||||||||||||    
T  13228947 ccacatacatcattaattaaatgtatctaaaaagtg 13228982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 29424062 - 29424125
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| |||| | ||||||    
T  29424062 acatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgtgaccggagggt 29424125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 197
Target Start/End: Original strand, 37716152 - 37716183
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||||||||||||    
T  37716152 cacatacatcattaattgaatgtatctaaaaa 37716183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 43483995 - 43483960
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtg 200  Q
    ||||||||||||||||||||||| ||||||||||||    
T  43483995 ccacatacatcattaattgaatgaatctaaaaagtg 43483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 45045458 - 45045517
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 228  Q
    ||||||||||||||||||| ||||||||  | |||||||| ||||| |||||||| ||||    
T  45045458 atacatcattaattgaatgaatctaaaatatagatttttgtttataatagtgatcagagg 45045517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 34194623 - 34194589
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  34194623 ccacatacatcattaattgaatgaatctaaaaagt 34194589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 40716809 - 40716775
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  40716809 ccacatacatcattaattgaatgaatctaaaaagt 40716775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 42631842 - 42631808
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  42631842 ccacatacatcattaattgaatgaatctaaaaagt 42631808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 2810075 - 2810030
Alignment:
Q  185 atgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  2810075 atgtatttaaaaaatggatttttgcttatattagtaatcggagggt 2810030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 7484694 - 7484743
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||||| | |||||| |||||||| || ||||||||||||||    
T  7484694 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttata 7484743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 13211302 - 13211237
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||| |||||||||| |||||||||||||| |  |||||| ||||||||| ||| | ||||||    
T  13211302 ccacatatatcattaattaaatgtatctaaaaaataaatttttacttatattaatgaccagagggt 13211237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 13841907 - 13841855
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| |||||||| || ||||||||  ||||||||||||| ||||||    
T  13841907 atacatcatttattgaatgaatttaaaaagtaaatttttgcttataatagtga 13841855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 15285734 - 15285782
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||| |||||||||||||| ||||||||  ||||||| ||||||||    
T  15285734 atacatccttaattgaatgtatttaaaaagtaaatttttgtttatatta 15285782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 15466103 - 15466151
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||| |||||||||||||| ||||||||  ||||||| ||||||||    
T  15466103 atacatccttaattgaatgtatttaaaaagtaaatttttgtttatatta 15466151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 37716135 - 37716079
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||| |||||||||| ||| ||||||||||||| | |||| ||||||||| |||||    
T  37716135 acatatatcattaattaaatatatctaaaaagtgaaattttacttatattaatgatc 37716079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 44282342 - 44282374
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  44282342 ccacatacatcattaattgaatgaatctaaaaa 44282374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 21506525 - 21506456
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  21506525 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtgtatt 21506456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 17773579 - 17773648
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| ||||    
T  17773579 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtatt 17773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 30397788 - 30397717
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 236  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||| |||||    
T  30397788 ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagtgaccggagggtgtatta 30397717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 17773564 - 17773508
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  17773564 ccacatacatcatttattgaatgtatctaaaaagtggatttttgtttatattagtga 17773508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 21998101 - 21998037
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| ||||||    
T  21998101 cacatacattattaattgaatgtatctaaaaaatgtatttttgcttatattagtgatcggagggt 21998037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30397802 - 30397866
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||    
T  30397802 cacatacatcattaattgaatgtatctaaaaaagggatttttgcttatattagtgaccggagggt 30397866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 21998117 - 21998172
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  21998117 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattggtga 21998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 31536374 - 31536309
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| | ||||||    
T  31536374 ccacatacatcattaaataaatgtatctaaaaagttgatttttgcttatattagtgaccggagggt 31536309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 30460690 - 30460746
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  30460690 ccacatacatcattaattgaatctatctaaaaagtaaatttttgcttatattagtga 30460746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 4844352 - 4844300
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  4844352 ccacatacatcattaattgaatgtatctaaaaaatgattttttgcttatatta 4844300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 21506541 - 21506592
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  21506541 cacatacatcattaattgaatgtatctaaaaattaaatttttgcttatatta 21506592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 28577679 - 28577730
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  28577679 cacatacattattaattgaatgtatctaaaaagtatatttttgcttatatta 28577730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 30460675 - 30460624
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  30460675 cacatacatcattgattgaatatatctacaaagtggatttttgcttatatta 30460624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 4844359 - 4844401
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  4844359 catcattaattgaatgtatctaaaaagtgaatttttgcttata 4844401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 15718470 - 15718540
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||| |||||||| || | ||||||| ||||||||||||| |||||||| |||||| ||||    
T  15718470 ccacatacatcatttattgaatgaattttaaaagtgaatttttgcttataatagtgatcagagggtgtatt 15718540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 16121046 - 16121106
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 229  Q
    |||||||||| ||| |||| ||||||||||| |||||||||||||| |||||||| |||||    
T  16121046 atacatcatttatttaatgaatctaaaaagttgatttttgcttataatagtgatcggaggg 16121106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 17268076 - 17268020
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||| ||||||| |||||| | ||||||| |||||||||||||    
T  17268076 ccacatacatcattaattaaatgtatttaaaaaatagatttttacttatattagtga 17268020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 17268091 - 17268146
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| |||||||||||||||||| |||||| | |||| |||||||||||||    
T  17268091 cacatacattattaattgaatgtatctagaaagtgaacttttacttatattagtga 17268146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 28577654 - 28577599
Alignment:
Q  175 cattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||| |||||||||||||| || |||||||||||||||||||| | ||||||    
T  28577654 cattaattaaatgtatctaaaaaatgaatttttgcttatattagtgacctgagggt 28577599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 31536392 - 31536447
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||| ||| ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  31536392 cacatgcataattaattgaatgtatttaaaaagtaaatttttgcttatattagtga 31536447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 6560720 - 6560650
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | |||||| ||||    
T  6560720 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggtgtatt 6560650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 7158319 - 7158254
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||  ||||||||  | |||||||||||||||| |||||| ||||||    
T  7158319 ccacatacatcatttattgaataaatctaaaacatagatttttgcttatatttgtgatcagagggt 7158254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 14310598 - 14310663
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| ||||||||    ||||||||||||||||||||| | ||||||    
T  14310598 ccacatacatcattaaatgaatgaatctaaaatacagatttttgcttatattagtgaccggagggt 14310663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 31398289 - 31398224
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  31398289 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 31398224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 13281593 - 13281541
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||| ||||||    
T  13281593 atacatcattaattgaatgaatctaaaatctagatttttgcttataatagtga 13281541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 26527236 - 26527188
Alignment:
Q  182 tgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||| || |||||||||||||| |||||||| ||||||    
T  26527236 tgaatgtatctaaaatgttgatttttgcttataatagtgatcggagggt 26527188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 34379812 - 34379868
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  34379812 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 34379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 28034092 - 28034142
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  28034092 ccacatacatcattaaatgaatgaacctaaaaagt-gatttttgcttatatt 28034142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 8363677 - 8363627
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||| ||||||||||||||||||||||||| |  ||||||| ||||||||    
T  8363677 acatatatcattaattgaatgtatctaaaaaatatatttttgtttatatta 8363627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 14173451 - 14173397
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| ||||| |||||||| ||||||||| | |||||||||||||| ||||||    
T  14173451 acatacttcatttattgaatgaatctaaaaattagatttttgcttataatagtga 14173397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 14177987 - 14177933
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| ||||| |||||||| ||||||||| | |||||||||||||| ||||||    
T  14177987 acatacttcatttattgaatgaatctaaaaattagatttttgcttataatagtga 14177933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 15836617 - 15836687
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 236  Q
    ||||||||||||| |||||||| ||||||||  || |||||| |||||||| |||| | |||||| |||||    
T  15836617 cacatacatcatttattgaatgaatctaaaacatgtatttttacttatatttgtgaccggagggtgtatta 15836687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 21478616 - 21478582
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  21478616 ccacatacatcattaattgaatgaatctaaaaagt 21478582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 3012439 - 3012488
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||| |||||||| ||||||||  || |||||||||||||||    
T  3012439 acatacatcatttattgaatgaatctaaaacatgaatttttgcttatatt 3012488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 6048018 - 6047985
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagt 199  Q
    |||||||||||||||||||||| |||||||||||    
T  6048018 cacatacatcattaattgaatgaatctaaaaagt 6047985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 6048033 - 6048066
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaag 198  Q
    ||||||||||||||||||||||| ||||||||||    
T  6048033 ccacatacatcattaattgaatgaatctaaaaag 6048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 13276549 - 13276484
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| | ||||||  || ||||||||||||||| |||| | ||||||    
T  13276549 ccacatacatcatttattgaatgaacctaaaacatgaatttttgcttatatttgtgaccggagggt 13276484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 3203730 - 3203678
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| |||||||| | ||||||| | |||||||||||||| ||||||    
T  3203730 atacatcattcattgaatgaacctaaaaaattgatttttgcttataatagtga 3203678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3203752 - 3203804
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| ||| |||| | ||||||||| |||||||||||||| ||||||    
T  3203752 atacatcatttattaaatgaacctaaaaagttgatttttgcttataatagtga 3203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 8146031 - 8146091
Alignment:
Q  170 tacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||| |||||| |||||||| ||   ||||||||||||||||||| | ||||||    
T  8146031 tacatcattaaatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggt 8146091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 12383868 - 12383920
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| ||||||||||||  ||||||| || |||||||||||||| ||||||    
T  12383868 atacataattaattgaatgagtctaaaatgtagatttttgcttataatagtga 12383920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 26527267 - 26527323
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| |||||||| ||  ||||||||||||| ||||||    
T  26527267 ccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtga 26527323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 33053827 - 33053763
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||| |||||||| ||||||||  | ||||||| |||||||| |||| | ||||||    
T  33053827 cacatacatcatttattgaatgaatctaaaacatagattttttcttatatttgtgaccggagggt 33053763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 52817645 - 52817709
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  52817645 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 52817709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 24941174 - 24941118
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24941174 ccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 24941118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 5281213 - 5281282
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | |||||| ||||    
T  5281213 cacatacatcattaattgaatgtatctaaaaagtgaatttttacttatattagtgaccggagggtgtatt 5281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 5418592 - 5418657
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||    
T  5418592 ccacatacatcattaattcaatgtatctaaaaagtaaatttttgcttatattagtgatcggagggt 5418657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 13689598 - 13689543
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  13689598 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtga 13689543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 55087791 - 55087853
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  55087791 catacatcattaattgaatgtatctaaaaattagatttttgcttatattagtgaccggagggt 55087853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 5418577 - 5418522
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  5418577 cacatacatcattaattgaatgtatctaaaaaattgatttttgctcatattagtga 5418522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 13689615 - 13689669
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  13689615 acatacattattaattgaatgaatctaaaaagtgaatttttgcttatattagtga 13689669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 44156083 - 44156133
Alignment:
Q  171 acatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  44156083 acatcattaattcaatgtatctaaaaagtgaatttttgcttatattagtga 44156133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 19934701 - 19934636
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||| | ||||||    
T  19934701 ccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggt 19934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 19934715 - 19934780
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| ||||||||| | |||||||||||||| |||||||| ||||||    
T  19934715 ccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgatcggagggt 19934780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 29224004 - 29223951
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  29224004 cacatatatcattaattgaatatatctaaaaaatggatttttgcttatattagt 29223951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 54164876 - 54164811
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||| | ||||||    
T  54164876 ccacatacatcatttattgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggt 54164811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 3504137 - 3504083
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    |||||||||||||||||||| ||||||||| || ||||||| |||||||||||||    
T  3504137 catacatcattaattgaatgaatctaaaaaatgaatttttgtttatattagtgat 3504083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 54164890 - 54164960
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||| |||||||| ||||||||| | |||||||||||||| |||||| | |||||| ||||    
T  54164890 ccacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtgaccggagggtgtatt 54164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 4370459 - 4370398
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||||||| ||||||||  |||||||||||||||||| |||||| ||||||    
T  4370459 atacatcatttattgaatgaatctaaaatatggatttttgcttatatttgtgatcggagggt 4370398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 24941192 - 24941253
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||| ||||| | ||||||    
T  24941192 atacatcattaattgaatgtatctaaaaggtgaatttttgctcatatcagtgaccggagggt 24941253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 29006912 - 29006968
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| || ||||||||||| ||||||||||| ||||||    
T  29006912 ccacatacatcatttattgaatgaatttaaaaagtggaattttgcttataatagtga 29006968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 52817629 - 52817565
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||| ||||||||||| ||||||| |||||||||||||| ||||| | ||||||    
T  52817629 cacatacatccttaaatgaatgtatcttaaaagtgaatttttgcttatatcagtgaccggagggt 52817565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 29006897 - 29006842
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||| |||||||| ||||||||| | |||||||||||||| ||||||    
T  29006897 cacatacatcatttattgaatgaatctaaaaaatagatttttgcttataatagtga 29006842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 3511768 - 3511714
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||||||||||||||||| |||||||| ||  | ||||||||||||||||||||    
T  3511768 atacatcattaattgaatgaatctaaaatgtaaagttttgcttatattagtgatc 3511714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 5535775 - 5535713
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 229  Q
    |||||||||||| |||||||| ||||||||| ||  |||||||||||| |||||||| |||||    
T  5535775 acatacatcatttattgaatgaatctaaaaaatgagtttttgcttatactagtgatcagaggg 5535713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 14451013 - 14450955
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||| |||||||| || |||||||||||||| |||||||| ||||||    
T  14451013 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggt 14450955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 34616296 - 34616350
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||| | ||||||||||||||| || |||||||||||||| ||||||||    
T  34616296 atacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 34616350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 38382055 - 38382109
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  38382055 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 38382109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 10031554 - 10031506
Alignment:
Q  170 tacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  10031554 tacatcattaattgaatgtatctaaaaagtaaattttt-cttatattagt 10031506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 10031599 - 10031652
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  10031599 cacatacattattaattaaatatatctaaaaagcggatttttgtttatattagt 10031652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 11796663 - 11796716
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 220  Q
    |||||||||||| |||||||  |||||||||||| ||||||||||||| |||||    
T  11796663 acatacatcatttattgaataaatctaaaaagtgaatttttgcttataatagtg 11796716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 49481957 - 49482022
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||||| ||| || || | ||||||||||||||||||| | ||||||    
T  49481957 ccacatacatcattaaatgaatgtacctagaatgtagttttttgcttatattagtgaccggagggt 49482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 20598316 - 20598264
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| |||||||||||||||||  || ||||||||||||||| ||||    
T  20598316 atacatcatttattgaatgtatctaaaacatgaatttttgcttatatttgtga 20598264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 9011822 - 9011872
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  9011822 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 9011872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 31860714 - 31860664
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  31860714 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 31860664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 200
Target Start/End: Original strand, 44639823 - 44639858
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtg 200  Q
    ||||||||||||||||||||||| ||||||||||||    
T  44639823 ccacatacatcattaattgaatgaatctaaaaagtg 44639858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 45861082 - 45861132
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||||| |||||| ||||||||||| || |||||||||||||    
T  45861082 ccacatacatcattaaatgaatgaatctaaaaagt-gaattttgcttatatt 45861132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 47181638 - 47181685
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  47181638 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 47181685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 48402472 - 48402425
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  48402472 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 48402425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 56364387 - 56364340
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||||    
T  56364387 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttata 56364340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 5289765 - 5289731
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  5289765 ccacatacatcattaattgaatgaatctaaaaagt 5289731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 6243706 - 6243756
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||||||||||||||||||||| | |  |||||| |||||||||||    
T  6243706 atacatcattaattgaatgtatctaaataataaattttttcttatattagt 6243756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 19878350 - 19878292
Alignment:
Q  164 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    |||||||||||| || | |||||| |||||||| ||  |||||||||||||||||||||    
T  19878350 tccacatacatcgtttaatgaatgaatctaaaatgttaatttttgcttatattagtgat 19878292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 22020177 - 22020123
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||| |||||| |||||||| |||||||||||| | ||||||||||| ||||||    
T  22020177 acatatatcatttattgaatgaatctaaaaagtgaacttttgcttataatagtga 22020123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 43635899 - 43635865
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  43635899 ccacatacatcattaattgaatgaatctaaaaagt 43635865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 47308173 - 47308119
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||| |||||| ||| |||| || |||||||||||||| ||||||||    
T  47308173 atacatcattaaatgaatgaatccaaaatgttgatttttgcttataatagtgatc 47308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 50038513 - 50038479
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  50038513 ccacatacatcattaattgaatgaatctaaaaagt 50038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 50045735 - 50045701
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  50045735 ccacatacatcattaattgaatgaatctaaaaagt 50045701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 53684863 - 53684912
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  53684863 cacatacatcattaaatgaatgaacctaaaaagt-gatttttgcttatatt 53684912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 54106536 - 54106482
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| ||||    
T  54106536 acatacatcatttattgaatgaatctaaaatatgaatttttgcttatatttgtga 54106482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 56328534 - 56328592
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||| |||||||| || | ||||||||||||||||||| | ||||||    
T  56328534 catcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggt 56328592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 2198092 - 2198055
Alignment:
Q  184 aatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  2198092 aatgtatctaaaaagtggagttttgcttataatagtga 2198055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 20215630 - 20215565
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| | |||||| ||  ||||||||||||| |||||| | ||||||    
T  20215630 ccacatacatcatttattgaatgaacctaaaatgtcaatttttgcttataatagtgaccggagggt 20215565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 22720602 - 22720639
Alignment:
Q  184 aatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  22720602 aatgtatctaaaaagtggagttttgcttataatagtga 22720639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 29224012 - 29224049
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttt 206  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29224012 atacatcattaattcaatgtatctaaaaagtgaatttt 29224049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 35005132 - 35005181
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||| ||| |||||||| ||||||||| || |||||||||||||    
T  35005132 ccacatacattatttattgaatgaatctaaaaattgaatttttgcttata 35005181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 36786209 - 36786164
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||||||||||||| |||||||| || |||||||| |||||    
T  36786209 atacatcattaattgaatgaatctaaaatgttgatttttgtttata 36786164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 4044375 - 4044431
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| |||||| |  ||||| || | |||||||||||||||||||    
T  4044375 ccacatacatcattaaatgaatgaacataaaatgtagttttttgcttatattagtga 4044431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 6462774 - 6462726
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||||||| |||||||| | ||||||||| |||||||| |||||    
T  6462774 cacatacatcatttattgaatgaacctaaaaagtagatttttgtttata 6462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 11583786 - 11583818
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||| |||||||||||    
T  11583786 acatacatcattaattgaatgaatctaaaaagt 11583818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 20542866 - 20542834
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  20542866 ccacatacatcattaattgaatgaatctaaaaa 20542834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 34827549 - 34827581
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  34827549 ccacatacatcattaattgaatgaatctaaaaa 34827581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 55936064 - 55936120
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| ||||||||  | |||||||||||||| ||||||    
T  55936064 ccacatacatcatttaatgaatgaatctaaaatattgatttttgcttataatagtga 55936120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 33412543 - 33412598
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33412543 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 33412598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 42449167 - 42449112
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42449167 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 42449112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 50260996 - 50260942
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50260996 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 50260942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 51617393 - 51617323
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 236  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| |||||    
T  51617393 cacatacatcattaattgaatgtatctaaaaagtggatttttggttatattagtgaccggagggtgtatta 51617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 52315468 - 52315538
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatta 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||    
T  52315468 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatactagtgatcggagagtgtatta 52315538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 51617408 - 51617478
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | |||||| ||||    
T  51617408 ccacatacaacattaattgaatgtatctaaaaagtggaattttgcttatattagtgaccggagggtgtatt 51617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 33412527 - 33412478
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33412527 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 33412478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 52315453 - 52315400
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattag 218  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52315453 ccacatacatcattaattgaatatatctaaaaagtggatttttgcttatattag 52315400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 51239321 - 51239385
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  51239321 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggt 51239385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 36362682 - 36362733
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36362682 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatatta 36362733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 21403973 - 21404036
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||    
T  21403973 ccacatacatcattaattgaatgtatctaaaa--tggatttttgcttatattagtgaccggagggt 21404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 41349737 - 41349803
Alignment:
Q  165 ccacatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  41349737 ccacatacatcattaattgaatgtatctaaaaaaatggatttttgcttatattagtgaccggagggt 41349803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 22173857 - 22173800
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  22173857 cacatacatcattaattgaatgtatctaaaatgtagatttttgcttatattaatgatc 22173800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 29720153 - 29720218
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| | ||||||    
T  29720153 ccacatacatcattaattaaatgtatttaaaaagtgaatttttgcttatattagtgaccggagggt 29720218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 38455228 - 38455163
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  38455228 ccacatacatcattaaattaatgtatctaaaaagtggatttttgcttatattaatgaccggagggt 38455163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 52168346 - 52168281
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| | ||||||    
T  52168346 ccacatacatcattaattaaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 52168281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 29565171 - 29565107
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| | ||||||    
T  29565171 cacatacatcattaattaaatgtatctaaaaaattgatttttgcttatattagtgaccggagggt 29565107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 41349722 - 41349658
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||||||||||||| | ||||||    
T  41349722 cacatacatcattaattgaatgtattttaaaagtgaatttttgcttatattagtgaccggagggt 41349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 52931704 - 52931648
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||||||||||||    
T  52931704 ccacatacatcattaattgaatgtatctaaagaatgaatttttgcttatattagtga 52931648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 52931751 - 52931815
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| | ||||||    
T  52931751 cacatacatcattaattgaatgtatctaaaaagtagatttttacttatatcagtgaccggagggt 52931815  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 21403958 - 21403897
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 228  Q
    ||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||    
T  21403958 cacatacatcattaattgaat-tatctaaaaagtagatttttgtttatattagtgatcggagg 21403897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 17552539 - 17552470
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||| | |||||| ||||    
T  17552539 cacatacattattaattgaatgtattttaaaagtgaatttttgcttatattagtgaccggagggtgtatt 17552470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 36362667 - 36362602
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||| | ||||||    
T  36362667 ccacatacatcattaattaaatgtatttaaagagttgatttttgcttatattagtgaccggagggt 36362602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 51239306 - 51239241
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  51239306 ccacatatatcattagttgaatgtatctaaagagtagatttttgcttatattagtgaccggagggt 51239241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 52168360 - 52168425
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||| | ||||||    
T  52168360 ccacatacatcattaaattaatgtatctaaaaagtggatttttgcttatgttaatgaccggagggt 52168425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 29565186 - 29565238
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  29565186 ccacatatatcattaattgaatgtatgtaaaaagtgaatttttgcttatatta 29565238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 29720138 - 29720074
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||| |||| |||||||||| |||||||||||||||||||| |||||||||||| | ||||||    
T  29720138 cacatatatcaataattgaatgcatctaaaaagtggatttttgattatattagtgaccggagggt 29720074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38455243 - 38455307
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||| | ||||||    
T  38455243 cacatacatcattaattaaatgtatctaaaaagtaaatttttgtttatattagtgaccggagggt 38455307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 22099841 - 22099786
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||    
T  22099841 cacatacattattaattgaatgtatctaaaaagtagatttttgtttaaattagtga 22099786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 18940046 - 18940104
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||||||||||||||||| |||||  |  ||||||||||||||||||||||    
T  18940046 ccacatacatcattaattgaatgtatataaaatataaatttttgcttatattagtgatc 18940104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 29720226 - 29720279
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattag 218  Q
    ||||||| ||||||||||||||| ||||||||| || |||||||||||||||||    
T  29720226 ccacatatatcattaattgaatgcatctaaaaaatgaatttttgcttatattag 29720279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 18940025 - 18939969
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    ||||||||||||||||| ||||||| |||||| || |||||| ||||||||||||||    
T  18940025 cacatacatcattaattaaatgtatttaaaaaatgaatttttacttatattagtgat 18939969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 26367532 - 26367469
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||| |||||||| ||||||||  |||||||||||||||||| |||| | ||||||    
T  26367532 acatacatcatttattgaatgaatctaaaacatggatttttgcttatatttgtgaccggagggt 26367469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 12744960 - 12744894
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||||||||||||| |||||||| ||   |||||||||||| |||||| | |||||||||||    
T  12744960 atacatcattaattgaatgaatctaaaatgtaagtttttgcttataatagtgaccggagggtctatt 12744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 17552554 - 17552596
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggattttt 207  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  17552554 ccacatacatcgttaattgaatgtatttaaaaagtggattttt 17552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 29512208 - 29512262
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    |||||||||||||||||| |||||||||||||| |  |||||||||||| |||||    
T  29512208 ccacatacatcattaattaaatgtatctaaaaaataaatttttgcttatgttagt 29512262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 50261011 - 50261081
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtgga-tttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||| |||| ||||||||||| ||||||| | ||||||||||||||||||| | |||||| ||||    
T  50261011 cacatacatccttaaatgaatgtatcttaaaagtgaattttttgcttatattagtgaccggagggtgtatt 50261081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 25881213 - 25881278
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| | |||||| || | ||||||||||||||||||| | ||||||    
T  25881213 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 25881278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 29512193 - 29512137
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||||||||||||||||||||||| ||||||  |  ||||||||||||||    
T  29512193 cacatacatcattaattgaatgtatctaaaaa-tggattgctatttatattagtgatc 29512137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 2128438 - 2128494
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| ||||||||  || ||||||||||||| ||||||    
T  2128438 ccacatacatcatttattgaatgaatctaaaacatgaatttttgcttataatagtga 2128494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 8439321 - 8439265
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| |||||| | |||||| || | |||||||||||||||||||    
T  8439321 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtga 8439265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 12744978 - 12745034
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | ||||||||||||||| ||  ||||||||||||| ||||||    
T  12744978 ccacatacatcatttaatgaatgtatctaaaatgttaatttttgcttataatagtga 12745034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 54595853 - 54595797
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  54595853 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 54595797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 26367552 - 26367603
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||||| |||||||| ||||||||  | ||||||||||||||||    
T  26367552 ccacatacatcatttattgaatgaatctaaaacattgatttttgcttatatt 26367603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 29076602 - 29076652
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    ||||||||||||||||||||||| |||||||||||  | |||||||||||||    
T  29076602 ccacatacatcattaattgaatgaatctaaaaagt-caattttgcttatatt 29076652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 41254010 - 41254073
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||| | | ||||||||||||| || |||||||||||||| || ||||| ||||||    
T  41254010 acatacatcatttaataaatgtatctaaaatgttgatttttgcttataataatgatcggagggt 41254073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 197
Target Start/End: Original strand, 52931719 - 52931750
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||||||||||||    
T  52931719 cacatacatcattaattgaatgtatctaaaaa 52931750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 21217245 - 21217299
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| | ||||| ||||||||| || |||||||||||||| ||||||    
T  21217245 acatacatcatttaatgaatatatctaaaacgttgatttttgcttataatagtga 21217299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 24075526 - 24075576
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||| ||||||||| |||||||| || |||||||||||||| ||||    
T  24075526 atacatcatgaattgaatgaatctaaaatgtagatttttgcttataatagt 24075576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 32589378 - 32589344
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  32589378 ccacatacatcattaattgaatgaatctaaaaagt 32589344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 42449183 - 42449237
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 220  Q
    ||||| ||||||||||||||||||| |||||| |  ||||||| |||||||||||    
T  42449183 cacattcatcattaattgaatgtatttaaaaaatatatttttgtttatattagtg 42449237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 42595814 - 42595848
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  42595814 ccacatacatcattaattgaatgaatctaaaaagt 42595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 44382891 - 44382945
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||| |||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  44382891 acatatatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 44382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 3972530 - 3972489
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggattttt 207  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  3972530 cacatacatcattaattgaatgaatctaaaatgtagattttt 3972489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 3994564 - 3994605
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggattttt 207  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  3994564 cacatacatcattaattgaatgaatctaaaatgtagattttt 3994605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 3997348 - 3997389
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggattttt 207  Q
    |||||||||||||||||||||| |||||||| || |||||||    
T  3997348 cacatacatcattaattgaatgaatctaaaatgtagattttt 3997389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 10872753 - 10872814
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||| ||||||||  |  ||||||||||||| |||||| | ||||||    
T  10872753 atacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgaccggagggt 10872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 21217226 - 21217173
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  21217226 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 21217173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 29241561 - 29241606
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||| |||||||| ||||||||||| |||||| |||||||    
T  29241561 atacatcatttattgaatgaatctaaaaagttgattttggcttata 29241606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 32759044 - 32759101
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||| |||||||||| ||| ||||||||||||  ||||||  ||||||||||||||    
T  32759044 cacatatatcattaattaaatatatctaaaaagtaaatttttatttatattagtgatc 32759101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 37897741 - 37897696
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||    
T  37897741 atacatcattaattgaatgaatctaaaatttagatttttgcttata 37897696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 50603589 - 50603646
Alignment:
Q  164 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||| |||||||| |  |||||| | |||||||||||||| ||||||    
T  50603589 tccacatacatcatttattgaatgaacttaaaaaatagatttttgcttataatagtga 50603646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 52215957 - 52216022
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| | ||| || |||||||| || |||||||||||||| |||||| | ||||||    
T  52215957 ccacatacatcatttaatgagtgaatctaaaatgttgatttttgcttataatagtgaccggagggt 52216022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 54680551 - 54680518
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagt 199  Q
    |||||||||||||||||||||||| |||||||||    
T  54680551 cacatacatcattaattgaatgtacctaaaaagt 54680518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 1086591 - 1086635
Alignment:
Q  170 tacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||| |||||||| |||||||||||| |||||| ||||||    
T  1086591 tacatcatttattgaatgaatctaaaaagtgaatttttacttata 1086635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 12568517 - 12568465
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||| ||| || ||||||| |||||||| |||||||| ||||||||||||    
T  12568517 atacatctttagttaaatgtatttaaaaagtagatttttgtttatattagtga 12568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 13544981 - 13544929
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||| ||| || ||||||| |||||||| |||||||| ||||||||||||    
T  13544981 atacatctttagttaaatgtatttaaaaagtagatttttgtttatattagtga 13544929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 26104833 - 26104781
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||| | |||||| ||  ||||||||||||||||||||    
T  26104833 atacatcattaaatgaatgaacctaaaatgtaaatttttgcttatattagtga 26104781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 30519676 - 30519740
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||| | |||||| |||||||| || | |||||||||||| |||||| | ||||||    
T  30519676 cacatacatcatttaatgaatgaatctaaaatgttggtttttgcttataatagtgaccagagggt 30519740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 31706674 - 31706618
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||  |||||||| ||||||||  || ||||||||||||||| ||||||    
T  31706674 acatacatcatatattgaatgaatctaaaatatgaatttttgcttatatttgtgatc 31706618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 39579588 - 39579628
Alignment:
Q  183 gaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  39579588 gaatgaatctaaaaagttgatttttgcttataatagtgatc 39579628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 40628746 - 40628793
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||||||| ||||||| |||||||||||  |||||||||||||||    
T  40628746 catacatcattagttgaatgaatctaaaaagt-tatttttgcttatatt 40628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 5574187 - 5574252
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  5574187 ccacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 5574252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 34248496 - 34248557
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  34248496 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccagagggt 34248557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 34248476 - 34248422
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34248476 acatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 34248422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 38598018 - 38598087
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | |||||| ||||    
T  38598018 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtatt 38598087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 3887894 - 3887826
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||    
T  3887894 acataaatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgatcagagggtgtatt 3887826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 3887911 - 3887975
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||    
T  3887911 cacatacatcattaattgaatgtatctaaaaagatgatttttgcttatattagtgaccggagggt 3887975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38594422 - 38594486
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  38594422 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggt 38594486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 43426691 - 43426635
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  43426691 ccacatacatcattaattgaatgtatttaaaaagtggatttttacttatattagtga 43426635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 6566995 - 6567048
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  6566995 catacatcattaattgaatatatctaaatagtggatttttgcttatattagtga 6567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 30902350 - 30902406
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  30902350 ccacatatatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtga 30902406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 1981062 - 1981117
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  1981062 cacatacatcattaattgaatgtatctaaaaatgagatttttgcttatattagtga 1981117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 1981048 - 1980983
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||| | ||||||    
T  1981048 ccacataaatcattaattgaatgtatttaaaatgtggaattttgcttatattagtgaccggagggt 1980983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 30902335 - 30902282
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  30902335 cacatacatcattaattgaatgtatttaaaaaatgaatttttgcttatattagt 30902282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 38594407 - 38594342
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  38594407 ccacatatatcattagttgaatgtatctaaagagtagatttttgcttatattagtgaccggagggt 38594342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 38598003 - 38597938
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  38598003 ccacatatatcattagttgaatgtatctaaagagtagatttttgcttatattagtgaccggagggt 38597938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 5574172 - 5574108
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||| |||||||||||||||||| | ||||||| |||||||||||||||||||| | ||||||    
T  5574172 cacatatatcattaattgaatgtattttaaaagtgaatttttgcttatattagtgaccggagggt 5574108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 20504302 - 20504250
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  20504302 atacatcattaattgaatatatctaaaaagtagatttttgtttatattagtga 20504250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 3714274 - 3714223
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattag 218  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  3714274 acatacataattaattgaatgtatctaaaaagtggttttttacttatattag 3714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 27331838 - 27331892
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||| ||||||    
T  27331838 acatacatcattaattgaatgaatctaaaatgttgatttttgcttataatagtga 27331892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 44274620 - 44274674
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||||| |||||||||||| |||||||||||||| |||||    
T  44274620 acatacatcatttattgaatgaatctaaaaagtgaatttttgcttatatcagtga 44274674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 22373687 - 22373744
Alignment:
Q  165 ccacatacatcattaattgaatgtatct-aaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||    
T  22373687 ccacatacatcattaactgaatgtatctaaaaaattagatttttgcttatattagtga 22373744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 13333508 - 13333452
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||||    
T  13333508 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 13333452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38618176 - 38618240
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||| || | ||||||| ||||||||| ||| | ||||||    
T  38618176 cacatacatcattaattgaatgtatctaacaaatagatttttacttatattaatgaccggagggt 38618240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 43426706 - 43426770
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||| | ||||||    
T  43426706 cacatatatcattaattgaatgtatctaaaaaataaatttttgcttatattaatgaccggagggt 43426770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 14308721 - 14308650
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 237  Q
    ||||||||||||| |||||||| ||||||||  || || |||||||||||| |||||| |||||| ||||||    
T  14308721 cacatacatcatttattgaatgaatctaaaacatgaatgtttgcttatatttgtgatcggagggtgtattat 14308650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 25278236 - 25278185
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||||||||||||| ||||||||||||| ||  ||||||||||||||||    
T  25278236 cacatacatcattaattaaatgtatctaaaaggtaaatttttgcttatatta 25278185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 25270917 - 25270863
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  25270917 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtga 25270863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 1961386 - 1961447
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccga 226  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| |||||| ||||    
T  1961386 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgacccga 1961447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 3714291 - 3714347
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||||||||| || || |||||||||| |||||||| |||||||||||||    
T  3714291 cacatacatcattaattggatatacctaaaaagtgaatttttgc-tatattagtgatc 3714347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 26003516 - 26003561
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||    
T  26003516 atacatcattaattgaatgaatctaaaatgtagatttttgcttata 26003561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 7837140 - 7837092
Alignment:
Q  173 atcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||   |||||||| ||||||||||||    
T  7837140 atcattaattgaatgtatctaaaaatgagatttttgtttatattagtga 7837092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22373669 - 22373617
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||| ||| |||||| |  ||||||||||||||||||||    
T  22373669 atacatcattaattgaatatatttaaaaaatatatttttgcttatattagtga 22373617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 26836234 - 26836286
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||| |||||| |||||||| ||||||||  |||||||||||||||||||||    
T  26836234 acataaatcatttattgaatgaatctaaaatatggatttttgcttatattagt 26836286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 31024234 - 31024178
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  31024234 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 31024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 38465870 - 38465922
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| |||||||| || |||||||||||| | ||||||    
T  38465870 atacatcattaattgaatgaatctaaaatgtagatttttgcttacaatagtga 38465922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 41056949 - 41056893
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||| | |||||||||||||||  | |||||||||||||| ||||||||    
T  41056949 acatacatcatttaatgaatgtatctaaaacattgatttttgcttataatagtgatc 41056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 14308725 - 14308788
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||| |||||||| ||||||||  ||  |||||||||||||| |||||| ||||||    
T  14308725 acatacatcatttattgaatgaatctaaaatatgattttttgcttatatttgtgatcggagggt 14308788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 200
Target Start/End: Original strand, 20504324 - 20504355
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtg 200  Q
    ||||||||||||||||||||||||||||||||    
T  20504324 atacatcattaattgaatgtatctaaaaagtg 20504355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 41824322 - 41824267
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgat 222  Q
    |||||||| ||| |||||||| ||||||||| || ||||||||||||| |||||||    
T  41824322 acatacataatttattgaatgaatctaaaaaatgaatttttgcttataatagtgat 41824267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 3123982 - 3124036
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||||| ||||||||  || ||||||||||||||| ||||    
T  3123982 acatacatcatttattgaatgaatctaaaacatgaatttttgcttatatttgtga 3124036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 11342051 - 11342105
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||||| |||| ||||||||  | |||||||||||||| ||||||||    
T  11342051 atacatcattaattaaatgaatctaaaatatagatttttgcttataatagtgatc 11342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 19612997 - 19612939
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||| ||||||||  | ||||||||||||||||||||| | ||||||    
T  19612997 catcattaaatgaatgaatctaaaatatagatttttgcttatattagtgaccggagggt 19612939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 24457163 - 24457093
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||| |||||| | |||||| ||   ||||||||||||||||||| | |||||| ||||    
T  24457163 ccacatacatcattaaatgaatgaacctaaaatgtaattttttgcttatattagtgaccggagggtgtatt 24457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 27743693 - 27743727
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  27743693 ccacatacatcattaattgaatgaatctaaaaagt 27743727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 38465852 - 38465782
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||| | |||||  |||||||| || |||||||||||||| |||||| | |||||| ||||    
T  38465852 ccacatacatcatttaatgaattaatctaaaatgttgatttttgcttataatagtgaccggagggtgtatt 38465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 42579096 - 42579130
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  42579096 ccacatacatcattaattgaatgaatctaaaaagt 42579130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 921878 - 921845
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagt 199  Q
    |||||||||||||||||||||| |||||||||||    
T  921878 cacatacatcattaattgaatgaatctaaaaagt 921845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 3098206 - 3098259
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  3098206 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 3098259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 3121511 - 3121564
Alignment:
Q  177 ttaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  3121511 ttaattgaatggatctaaaatgtagatttttgcttataatagtgaccggagggt 3121564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 8740575 - 8740526
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| |||||| |||||||| || |||||||||||||| ||||||    
T  8740575 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtga 8740526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 15119858 - 15119919
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||| |||||  |||||||| || |||||||||||||| |||||| | ||||||    
T  15119858 atacatcattaaatgaataaatctaaaatgtagatttttgcttataatagtgaccggagggt 15119919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 15859632 - 15859677
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||    
T  15859632 atacatcattaattgaatgaatctaaaatatagatttttgcttata 15859677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 17866259 - 17866308
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    |||||||| ||| |||||||| ||||||||  ||||||||||||||||||    
T  17866259 acatacataatttattgaatgaatctaaaacatggatttttgcttatatt 17866308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 20195351 - 20195318
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagt 199  Q
    |||||||||||||||||||||| |||||||||||    
T  20195351 cacatacatcattaattgaatgaatctaaaaagt 20195318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 21183404 - 21183453
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||||| | |||||| |||||||| || ||||||||||||||    
T  21183404 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttata 21183453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 25270936 - 25270989
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  25270936 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 25270989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 28680916 - 28680949
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaag 198  Q
    ||||||||||||||||||||||| ||||||||||    
T  28680916 ccacatacatcattaattgaatgaatctaaaaag 28680949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 29771780 - 29771747
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagt 199  Q
    |||||||||||||||||||||| |||||||||||    
T  29771780 cacatacatcattaattgaatgaatctaaaaagt 29771747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 41056968 - 41057021
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  41056968 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 41057021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 6566974 - 6566922
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||| ||||||| ||| |||||||||||||  |||||||| ||||||||||    
T  6566974 atacattattaattaaatatatctaaaaagtgattttttgctcatattagtga 6566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 15119840 - 15119784
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| |||||||| ||  ||||||||||||| ||||||    
T  15119840 ccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtga 15119784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 21488104 - 21488156
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||| |||||| |||||||| ||   |||||||||||||||    
T  21488104 ccacatacatcattaaatgaatgaatctaaaatgtaattttttgcttatatta 21488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 23143567 - 23143619
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| |||||||  | ||||||||| |||||||||||||| ||||||    
T  23143567 atacatcatttattgaataaacctaaaaagttgatttttgcttataatagtga 23143619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 23555357 - 23555409
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| |||||||  | ||||||||| |||||||||||||| ||||||    
T  23555357 atacatcatttattgaataaacctaaaaagttgatttttgcttataatagtga 23555409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 32473534 - 32473502
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  32473534 ccacatacatcattaattgaatgaatctaaaaa 32473502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 36490542 - 36490510
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  36490542 ccacatacatcattaattgaatgaatctaaaaa 36490510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 38181841 - 38181909
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 237  Q
    ||||||||||||||||||| || ||||| || | |||||||||||| |||| | | |||||| ||||||    
T  38181841 atacatcattaattgaatgaatgtaaaatgtagttttttgcttataatagtaaccggagggtgtattat 38181909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 38618147 - 38618119
Alignment:
Q  195 aaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||||||||||||||||||||    
T  38618147 aaagtggatttttgcttatattagtgatc 38618119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 41824337 - 41824393
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| |||||||| | |||||||||  |||||| |||||| ||||||    
T  41824337 ccacatacatcatttattgaatgaacctaaaaagtcaatttttacttatagtagtga 41824393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 44587720 - 44587776
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| | ||| |||| ||||||||||| | |||||||||||| ||||||    
T  44587720 ccacatacatcactcattcaatgaatctaaaaagtagttttttgcttataatagtga 44587776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 45472471 - 45472415
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    |||||||||||| |||||||| || ||||||||  |||||| |||||| ||||||||    
T  45472471 acatacatcatttattgaatgaatttaaaaagtaaatttttacttataatagtgatc 45472415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 120208 - 120136
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctattat 237  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | |||||| ||||||    
T  120208 ccacatacatcattaattgaatgtatctaaaaagtgaaattttgcttatattagtgaccggagggtgtattat 120136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 120223 - 120287
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  120223 cacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggt 120287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 38238862 - 38238926
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  38238862 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 38238926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 46944006 - 46943942
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  46944006 cacatacatcattaattgaatgtatctaaaaagtggatttttgtttatattagtgaccggagggt 46943942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 25079269 - 25079214
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25079269 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtga 25079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 29498846 - 29498776
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||| ||||    
T  29498846 ccacatacatcattaattgaatatatctaaaatgtggatttttgcttatattattgatcggagggtttatt 29498776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 34703524 - 34703585
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||    
T  34703524 atacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 34703585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 40416987 - 40417039
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40416987 atacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtga 40417039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 25079285 - 25079340
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  25079285 cacatacatcattaattgaatgtatctaaaaagtagatttttgtttatattagtga 25079340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 4406478 - 4406424
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4406478 acatacatcattaattgaatgtatctaaaaagtgaatttttgcatatattagtga 4406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 38238847 - 38238781
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtg-gatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  38238847 ccacatacatcattaattgaatgtatctaaaaagtgaaatttttgcttatattagtgaccggagggt 38238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 22106745 - 22106814
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||||||||||||||||||| || | ||||| |||||||||||||| |||||| ||||    
T  22106745 cacatacatcattaattgaatgtatctaaaaaatgaaattttgtttatattagtgatcagagggtgtatt 22106814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 40529606 - 40529537
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||||||||||||||||||| || | ||||| |||||||||||||| |||||| ||||    
T  40529606 cacatacatcattaattgaatgtatctaaaaaatgaaattttgtttatattagtgatcagagggtgtatt 40529537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 22106730 - 22106674
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  22106730 ccacatacatcattaattgaatatatctaaaaaatagatttttgcttatattagtga 22106674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 27554575 - 27554639
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||| ||||||    
T  27554575 cacatacatcattaattgaatgtattttaaaagtaaatttttgcttatattagtgatcggagggt 27554639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 40529621 - 40529677
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||    
T  40529621 ccacatacatcattaattgaatatatctaaaaaatagatttttgcttatattagtga 40529677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 6455626 - 6455696
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||||||||||| |||||| | |||||| || ||||||||||||||||||||||| |||||| ||||    
T  6455626 ccacatacatcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgatcggagggtgtatt 6455696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 21387637 - 21387583
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  21387637 acatacatcattaattgaatgaatctagaaaatggatttttgcttatattagtga 21387583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 716312 - 716365
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  716312 cacatacatcattaattgaatgtatctaaaaattaaatttttgcttatattagt 716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 2456400 - 2456335
Alignment:
Q  164 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgaggg 229  Q
    ||||||||||||||||||| |||| | ||||||||| |||||||||||||| |||||||| |||||    
T  2456400 tccacatacatcattaattcaatgaacctaaaaagtagatttttgcttataatagtgatcggaggg 2456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 1706895 - 1706831
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||| |  |||||| ||||||||||||| | ||||||    
T  1706895 cacatacatcattaattgaatgtatctaaaaaataaatttttacttatattagtgaccggagggt 1706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 1706914 - 1706966
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  1706914 atacatcattaaatgaatgtatctaaaaaatgaatttttgcttatattagtga 1706966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 41872128 - 41872184
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| |||||| |||||||| || |||||||||||||||||||||    
T  41872128 ccacatacatcattaaatgaatgaatctaaaatgtagatttttgcttatattagtga 41872184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 45000678 - 45000734
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||    
T  45000678 ccacatacatcatcaattgaatgtgtctaaaaagtacatttttgcttatattagtga 45000734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 18234423 - 18234478
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  18234423 cacatacatcattaattgaatgtatctaaaaattaaatttttgtttatattagtga 18234478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 22281502 - 22281443
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagg 228  Q
    |||||||||||||||||| |||||||||| | |||||||| |||||||||||||| ||||    
T  22281502 atacatcattaattgaatatatctaaaaattagatttttgtttatattagtgatcggagg 22281443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 29498861 - 29498912
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  29498861 cacatacataattaattaaatgtatctaaaaaatggatttttgcttatatta 29498912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 24936610 - 24936664
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||    
T  24936610 ccacatacatcattaattgaatatatctaaaaagtgaatttttatttatattagt 24936664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 4407713 - 4407761
Alignment:
Q  182 tgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  4407713 tgaatgtatctaaaaagtggatttttgtttatattagtgaccggagggt 4407761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 40416968 - 40416904
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||| ||||||||||||||||||||||||  ||| |||||||||||||||| ||| | ||||||    
T  40416968 cacatgcatcattaattgaatgtatctaaattgtgaatttttgcttatattaatgaccggagggt 40416904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 7430962 - 7431013
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||||||||||||||||||||| | |||||  ||||||||    
T  7430962 cacatacatcattaattgaatgtatctaaaaagtagttttttatttatatta 7431013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 27554559 - 27554504
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||| |  ||||||  ||||||||||||    
T  27554559 cacatacatcattaattgaatgtatctaaaaaataaatttttatttatattagtga 27554504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 34703505 - 34703454
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||| ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  34703505 cacatgcatcattaattgaatgtatctaaattgtgaatttttgcttatatta 34703454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 46944016 - 46944066
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    ||||||||||||||||||||||||||||||| |  |||||| |||||||||    
T  46944016 acatacatcattaattgaatgtatctaaaaattaaatttttacttatatta 46944066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 7701267 - 7701320
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtg 220  Q
    |||||||||||| | ||||||||||||||| || |||||||||||||| |||||    
T  7701267 acatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtg 7701320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 12274872 - 12274807
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| |||||||| |  ||||| ||||||||||||||||| |||||| | ||||||    
T  12274872 ccacatacatcatttattgaatgaacataaaatgtggatttttgcttataatagtgaccagagggt 12274807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 25245220 - 25245285
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| |||||| | ||||||    
T  25245220 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggt 25245285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 45000663 - 45000614
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatat 215  Q
    |||| ||||||||||||||||||||||| ||| | |||||||||||||||    
T  45000663 cacacacatcattaattgaatgtatctagaaaatagatttttgcttatat 45000614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 2943275 - 2943219
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  2943275 ccacatacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 2943219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 34275254 - 34275198
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| |||||| | |||||| || | |||||||||||||||||||    
T  34275254 ccacatacatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtga 34275198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 217
Target Start/End: Complemental strand, 24936595 - 24936544
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||| |||| |||||||||||||||| |||||||| ||||||| ||||||||    
T  24936595 cacagacataattaattgaatgtatccaaaaagtgaatttttgtttatatta 24936544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 31417595 - 31417650
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||| |||||||| ||||||||  || ||||||||||||||| ||||    
T  31417595 cacatacatcatttattgaatgaatctaaaacatgaatttttgcttatatttgtga 31417650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 34840675 - 34840628
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttata 214  Q
    |||||||||||| |||||||| |||||||||||| | |||||||||||    
T  34840675 acatacatcatttattgaatgaatctaaaaagtgaacttttgcttata 34840628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 3498357 - 3498323
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  3498357 ccacatacatcattaattgaatgaatctaaaaagt 3498323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 6455605 - 6455547
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||| |||||| |||||||| ||  ||||||||||||| |||||||| ||||||    
T  6455605 catcattaaatgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggt 6455547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 10599067 - 10599125
Alignment:
Q  163 atccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| |||||||| | ||||||| | ||||||| |||||| ||||||    
T  10599067 atccacatacatcatttattgaatgaacctaaaaaatagatttttacttataatagtga 10599125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 11602846 - 11602900
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| |||||||| |||||||||||| | ||||| ||||| ||||||    
T  11602846 acatacatcatttattgaatgaatctaaaaagtgaacttttgtttataatagtga 11602900  T

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Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 22281522 - 22281572
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||| ||||||||||| ||||||| ||||||||  ||||||||||||||||    
T  22281522 acattcatcattaattcaatgtatttaaaaagtaaatttttgcttatatta 22281572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 24935947 - 24935885
Alignment:
Q  173 atcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    |||||||| |||||| | |||||| || ||||||||||||||||||||| | |||||| ||||    
T  24935947 atcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgaccggagggtgtatt 24935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 25774261 - 25774315
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||| | |||||| |||||||| ||| ||||||||||||| ||||||    
T  25774261 acatacatcatttagtgaatgaatctaaaatgtgtatttttgcttataatagtga 25774315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 43813202 - 43813248
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgctt 211  Q
    |||||||||||||| |||||||| |||||| |||| |||||||||||    
T  43813202 ccacatacatcatttattgaatgaatctaagaagttgatttttgctt 43813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 46022609 - 46022555
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| || | ||||||||||||||| || |||||||||||||| ||||||    
T  46022609 acatacatcctttaatgaatgtatctaaaacgttgatttttgcttataatagtga 46022555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 3967781 - 3967838
Alignment:
Q  164 tccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||| ||| |||| | ||||||||| | |||||||||||| ||||||    
T  3967781 tccacatacatcatttattcaatgaacctaaaaagtagttttttgcttataatagtga 3967838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 4406142 - 4406077
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| | |||||| || | ||||| ||||||||||||| | ||||||    
T  4406142 ccacatacatcattaaatgaatgaacctaaaatgtagtttttttcttatattagtgaccggagggt 4406077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 7701248 - 7701195
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  7701248 catacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtga 7701195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 10095782 - 10095717
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||| | |||||| |||||||| ||  ||||||||||||| |||||| | ||||||    
T  10095782 ccacatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggt 10095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 10415016 - 10415081
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| |  |||||  | | ||||||||||||||||||||| ||||||    
T  10415016 ccacatacatcattaaatgaatgaacataaaatatagttttttgcttatattagtgatcggagggt 10415081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 15051142 - 15051081
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||| |||||||||||||||||  |  ||||||||||||||| |||| | ||||||    
T  15051142 atacatcatttattgaatgtatctaaaacataaatttttgcttatatttgtgaccggagggt 15051081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 28949352 - 28949417
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| |||||| | ||| || || | ||||||||||||||||||| | ||||||    
T  28949352 ccacatacatcattaaatgaatgaacctagaatgtagttttttgcttatattagtgaccggagggt 28949417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 46658810 - 46658843
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagt 199  Q
    |||||||||||||||||||||| |||||||||||    
T  46658810 cacatacatcattaattgaatgaatctaaaaagt 46658843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 716293 - 716265
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaa 197  Q
    |||||||||||||||||||||||||||||    
T  716293 atacatcattaattgaatgtatctaaaaa 716265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 8169175 - 8169227
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    |||||||||||| |||||||| |||||||||||  | ||||||||||| ||||    
T  8169175 acatacatcatttattgaatgaatctaaaaagttaacttttgcttataatagt 8169227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 20353156 - 20353188
Alignment:
Q  167 acatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||| |||||||||||    
T  20353156 acatacatcattaattgaatgaatctaaaaagt 20353188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 23818483 - 23818431
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||| | |||||| |||||||| || |||||||||||||| ||||||    
T  23818483 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtga 23818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 24280902 - 24280954
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| || ||||| || ||||||| |||||| ||||||    
T  24280902 atacatcattaattgaatgaatttaaaatgtagatttttacttataatagtga 24280954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 31813470 - 31813418
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||||||||||||| |||||||| ||  ||||||| ||||| ||||||    
T  31813470 atacatcattaattgaatgaatctaaaatgtaaatttttgtttataatagtga 31813418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 33471553 - 33471521
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaa 197  Q
    ||||||||||||||||||||||| |||||||||    
T  33471553 ccacatacatcattaattgaatgaatctaaaaa 33471521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 197
Target Start/End: Original strand, 36427748 - 36427776
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaa 197  Q
    |||||||||||||||||||||||||||||    
T  36427748 atacatcattaattgaatgtatctaaaaa 36427776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 41508687 - 41508738
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatatta 217  Q
    |||||||||||||||| |||||| |||||||||||  |||||| |||||||||    
T  41508687 ccacatacatcattaaatgaatgaatctaaaaagtcaattttt-cttatatta 41508738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 54465 - 54523
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatc 223  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  54465 ccacatacatcattaattgaatgtatctaaagagtgaatttttgcttatattagtgatc 54523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 54447 - 54397
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 219  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54447 atacatcattaattgaatgtatctaaaaagtagatttttgcttatattagt 54397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 61225 - 61156
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggtctatt 235  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | |||||| ||||    
T  61225 cacatacatcattaattgaatgtatctaaaaaagggatttttgcttatattagtgaccggagggtgtatt 61156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 61239 - 61304
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  61239 ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagtgaccggagggt 61304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 246858 - 246802
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  246858 ccacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtga 246802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 246876 - 246937
Alignment:
Q  169 atacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  246876 atacatcattaattgaatgtatctaaaaagtagatttttgcttatattaatgaccagagggt 246937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 4013 - 3948
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||| | ||||||    
T  4013 ccacatacatcattaaattaatgtatttaaaaagtgtatttttgcttatattagtgaccggagggt 3948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 4028 - 4092
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||||||||||| | ||||||    
T  4028 cacatacaacatttattgaatgtatctaaaaagtaaatttttgcttatattagtgaccagagggt 4092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 17228 - 17165
Alignment:
Q  166 cacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgatccgagggt 230  Q
    ||||||||||||||||||||| ||| |||||||| || |||||||||||||||||| | ||||||    
T  17228 cacatacatcattaattgaatatatataaaaagt-gaattttgcttatattagtgaccggagggt 17165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 13758 - 13724
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagt 199  Q
    ||||||||||||||||||||||| |||||||||||    
T  13758 ccacatacatcattaattgaatgaatctaaaaagt 13724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 7741 - 7790
Alignment:
Q  172 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    ||||||||| |||||| |||||||| || |||||||||||||| ||||||    
T  7741 catcattaaatgaatgaatctaaaatgtagatttttgcttataatagtga 7790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 22362 - 22315
Alignment:
Q  168 catacatcattaattgaatgtatctaaaaagtggatttttgcttatatt 216  Q
    ||||||||||||| |||||| |||||||||||| |||||| ||||||||    
T  22362 catacatcattaaatgaatgaatctaaaaagtgaattttt-cttatatt 22315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 139373 - 139429
Alignment:
Q  165 ccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtga 221  Q
    |||||||||||||||| |||||| |||||||| ||   ||||||||||||| |||||    
T  139373 ccacatacatcattaaatgaatgaatctaaaatgtaattttttgcttatatgagtga 139429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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