View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8906_low_4 (Length: 683)

Name: NF8906_low_4
Description: NF8906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8906_low_4
NF8906_low_4
[»] chr3 (39 HSPs)
chr3 (1-500)||(13768393-13768897)
chr3 (1-500)||(13754992-13755496)
chr3 (398-673)||(13733530-13733807)
chr3 (382-526)||(13741517-13741662)
chr3 (88-267)||(46048899-46049082)
chr3 (133-259)||(35539614-35539742)
chr3 (133-260)||(46006050-46006178)
chr3 (139-266)||(41212000-41212130)
chr3 (109-246)||(45603382-45603522)
chr3 (281-365)||(13741404-13741490)
chr3 (117-171)||(36619273-36619327)
chr3 (110-171)||(44110945-44111006)
chr3 (108-193)||(52744666-52744751)
chr3 (281-362)||(13733398-13733481)
chr3 (111-167)||(26085176-26085232)
chr3 (128-171)||(28197552-28197595)
chr3 (120-183)||(40485050-40485113)
chr3 (211-266)||(54422741-54422796)
chr3 (108-183)||(54425529-54425604)
chr3 (8-79)||(13741314-13741387)
chr3 (142-192)||(29950766-29950816)
chr3 (142-192)||(29999920-29999970)
chr3 (133-191)||(40242156-40242214)
chr3 (206-260)||(52995699-52995753)
chr3 (120-174)||(55222602-55222656)
chr3 (5-49)||(13733309-13733353)
chr3 (85-189)||(24744342-24744445)
chr3 (205-265)||(33831986-33832046)
chr3 (206-257)||(26085093-26085144)
chr3 (139-260)||(36277738-36277863)
chr3 (205-260)||(36902369-36902424)
chr3 (133-200)||(40861203-40861270)
chr3 (147-198)||(55272857-55272908)
chr3 (136-182)||(106382-106428)
chr3 (134-192)||(3973232-3973290)
chr3 (134-192)||(3996586-3996644)
chr3 (134-192)||(4010125-4010183)
chr3 (136-169)||(43584601-43584634)
chr3 (139-191)||(1151543-1151595)
[»] chr1 (39 HSPs)
chr1 (85-271)||(43822788-43822976)
chr1 (85-271)||(13984050-13984238)
chr1 (117-271)||(52353744-52353900)
chr1 (107-266)||(25813753-25813914)
chr1 (91-266)||(36166909-36167085)
chr1 (85-260)||(51504456-51504634)
chr1 (83-255)||(27544400-27544574)
chr1 (82-271)||(43506270-43506463)
chr1 (110-271)||(43675143-43675309)
chr1 (83-257)||(49003286-49003462)
chr1 (111-260)||(32451708-32451858)
chr1 (137-266)||(42831662-42831794)
chr1 (144-258)||(23333785-23333901)
chr1 (133-271)||(32851731-32851871)
chr1 (132-260)||(11120575-11120705)
chr1 (83-188)||(38902061-38902166)
chr1 (120-260)||(47783612-47783754)
chr1 (139-266)||(38600939-38601069)
chr1 (137-271)||(51061595-51061733)
chr1 (137-271)||(36297995-36298132)
chr1 (133-260)||(11241450-11241580)
chr1 (86-189)||(42401096-42401199)
chr1 (109-266)||(22680396-22680556)
chr1 (206-271)||(11569964-11570029)
chr1 (85-162)||(42009183-42009260)
chr1 (235-271)||(641832-641868)
chr1 (139-182)||(1745152-1745196)
chr1 (212-268)||(9505536-9505592)
chr1 (206-266)||(11566926-11566986)
chr1 (133-168)||(33326201-33326236)
chr1 (133-192)||(33780523-33780582)
chr1 (205-256)||(40287033-40287084)
chr1 (209-256)||(51263217-51263264)
chr1 (133-242)||(47364363-47364475)
chr1 (151-200)||(19415375-19415424)
chr1 (142-175)||(37524181-37524214)
chr1 (131-168)||(50011433-50011470)
chr1 (142-182)||(23655162-23655202)
chr1 (118-170)||(35604507-35604559)
[»] chr5 (34 HSPs)
chr5 (83-271)||(41520783-41520974)
chr5 (83-260)||(18396440-18396619)
chr5 (137-260)||(26675455-26675580)
chr5 (137-260)||(26947063-26947188)
chr5 (133-266)||(12593143-12593278)
chr5 (145-258)||(2375573-2375688)
chr5 (112-260)||(35463177-35463329)
chr5 (86-271)||(7293058-7293245)
chr5 (110-266)||(29558354-29558512)
chr5 (133-224)||(42551051-42551145)
chr5 (150-258)||(33133236-33133346)
chr5 (133-258)||(13420681-13420807)
chr5 (132-260)||(1309733-1309863)
chr5 (177-255)||(3558800-3558881)
chr5 (139-181)||(2970351-2970393)
chr5 (118-268)||(11200751-11200906)
chr5 (121-179)||(14731007-14731065)
chr5 (142-196)||(42951699-42951753)
chr5 (118-190)||(4935172-4935244)
chr5 (137-271)||(4432342-4432479)
chr5 (83-190)||(13417180-13417287)
chr5 (205-260)||(15468168-15468223)
chr5 (133-183)||(11200497-11200547)
chr5 (133-182)||(2987955-2988004)
chr5 (108-192)||(837693-837777)
chr5 (83-266)||(8228783-8228969)
chr5 (139-182)||(6761363-6761406)
chr5 (209-260)||(13486607-13486658)
chr5 (86-168)||(14643343-14643425)
chr5 (151-196)||(13914681-13914726)
chr5 (205-266)||(28998043-28998104)
chr5 (131-191)||(8516866-8516925)
chr5 (235-271)||(20420181-20420217)
chr5 (121-181)||(26148970-26149030)
[»] chr6 (14 HSPs)
chr6 (87-271)||(32977297-32977484)
chr6 (83-271)||(7693843-7694035)
chr6 (83-260)||(32658347-32658526)
chr6 (134-258)||(5002341-5002469)
chr6 (107-255)||(33755768-33755918)
chr6 (157-260)||(22281763-22281868)
chr6 (135-268)||(31743534-31743670)
chr6 (132-258)||(387750-387879)
chr6 (108-193)||(3705666-3705751)
chr6 (205-254)||(9491657-9491706)
chr6 (135-191)||(24848461-24848518)
chr6 (133-196)||(3543289-3543352)
chr6 (205-256)||(21940977-21941028)
chr6 (205-271)||(18804222-18804288)
[»] chr2 (44 HSPs)
chr2 (85-266)||(26312488-26312671)
chr2 (83-260)||(11921967-11922146)
chr2 (83-257)||(14772847-14773023)
chr2 (85-260)||(16117835-16118013)
chr2 (83-202)||(15269280-15269399)
chr2 (137-271)||(34375061-34375196)
chr2 (133-260)||(9583165-9583294)
chr2 (133-266)||(6710843-6710978)
chr2 (133-268)||(37347808-37347949)
chr2 (108-260)||(41068743-41068891)
chr2 (83-260)||(36887490-36887670)
chr2 (133-259)||(9733674-9733802)
chr2 (133-260)||(3668861-3668991)
chr2 (208-260)||(40999701-40999753)
chr2 (151-258)||(5038736-5038848)
chr2 (108-175)||(31050055-31050122)
chr2 (133-172)||(36267096-36267135)
chr2 (83-169)||(14332011-14332097)
chr2 (152-271)||(65383-65505)
chr2 (132-191)||(21848168-21848227)
chr2 (205-256)||(36267001-36267052)
chr2 (112-171)||(44677670-44677729)
chr2 (108-271)||(7868228-7868393)
chr2 (205-271)||(34234896-34234962)
chr2 (226-260)||(45135785-45135819)
chr2 (222-271)||(4279879-4279928)
chr2 (205-258)||(18970021-18970074)
chr2 (81-185)||(28857179-28857283)
chr2 (151-195)||(30465352-30465396)
chr2 (140-191)||(2968803-2968854)
chr2 (137-192)||(4634050-4634105)
chr2 (220-259)||(16341961-16342000)
chr2 (153-183)||(17603948-17603978)
chr2 (118-168)||(23394249-23394299)
chr2 (206-260)||(26297138-26297192)
chr2 (133-167)||(39446435-39446469)
chr2 (143-196)||(8798679-8798732)
chr2 (85-190)||(11511843-11511948)
chr2 (107-192)||(32887549-32887634)
chr2 (138-250)||(37074773-37074885)
chr2 (136-164)||(10864495-10864523)
chr2 (136-168)||(21455060-21455092)
chr2 (136-176)||(22621262-22621302)
chr2 (206-266)||(34820926-34820986)
[»] chr4 (38 HSPs)
chr4 (85-271)||(10180537-10180725)
chr4 (107-271)||(2396310-2396477)
chr4 (85-260)||(35331907-35332084)
chr4 (153-273)||(53096599-53096722)
chr4 (93-266)||(39055179-39055354)
chr4 (88-260)||(52199826-52200000)
chr4 (121-271)||(822339-822491)
chr4 (133-271)||(12447430-12447571)
chr4 (139-258)||(23359127-23359248)
chr4 (108-260)||(35308931-35309086)
chr4 (135-260)||(35382337-35382464)
chr4 (133-238)||(45833894-45834000)
chr4 (108-266)||(49211044-49211206)
chr4 (85-260)||(26699029-26699207)
chr4 (144-266)||(22628485-22628610)
chr4 (139-260)||(39629171-39629294)
chr4 (137-271)||(30865903-30866024)
chr4 (147-259)||(38864966-38865077)
chr4 (83-224)||(35144447-35144590)
chr4 (133-271)||(51655139-51655283)
chr4 (205-272)||(40918027-40918094)
chr4 (133-196)||(42426862-42426925)
chr4 (133-199)||(23607440-23607506)
chr4 (108-240)||(28897635-28897768)
chr4 (210-260)||(43968804-43968854)
chr4 (134-195)||(44500584-44500645)
chr4 (133-260)||(8824986-8825112)
chr4 (154-260)||(11347003-11347116)
chr4 (205-271)||(2574095-2574161)
chr4 (206-271)||(31262461-31262529)
chr4 (106-164)||(41327644-41327702)
chr4 (111-164)||(3010957-3011010)
chr4 (120-181)||(6076643-6076704)
chr4 (151-195)||(18743269-18743314)
chr4 (133-174)||(28909451-28909492)
chr4 (134-170)||(8489469-8489505)
chr4 (133-165)||(28967352-28967384)
chr4 (137-193)||(37189048-37189104)
[»] chr8 (40 HSPs)
chr8 (85-271)||(13628960-13629149)
chr8 (85-271)||(13729372-13729561)
chr8 (111-271)||(6518993-6519154)
chr8 (130-260)||(5535762-5535894)
chr8 (87-260)||(31226395-31226570)
chr8 (111-256)||(35468360-35468506)
chr8 (109-260)||(1155084-1155237)
chr8 (121-260)||(18806528-18806669)
chr8 (133-266)||(37673728-37673868)
chr8 (133-260)||(9604473-9604603)
chr8 (139-260)||(31128534-31128657)
chr8 (151-271)||(2603062-2603184)
chr8 (128-271)||(11777634-11777779)
chr8 (136-260)||(38937815-38937942)
chr8 (110-260)||(14426069-14426221)
chr8 (140-271)||(28540683-28540817)
chr8 (137-271)||(23036806-23036943)
chr8 (133-271)||(3628241-3628380)
chr8 (208-260)||(5978565-5978617)
chr8 (83-260)||(23982267-23982451)
chr8 (133-255)||(4797204-4797329)
chr8 (144-260)||(7288245-7288364)
chr8 (205-266)||(30714095-30714156)
chr8 (205-266)||(30721872-30721933)
chr8 (120-260)||(5139635-5139776)
chr8 (160-266)||(8673597-8673706)
chr8 (205-260)||(9134174-9134229)
chr8 (120-192)||(9135095-9135166)
chr8 (140-196)||(28557336-28557392)
chr8 (136-271)||(35973360-35973498)
chr8 (205-260)||(6427148-6427203)
chr8 (83-182)||(13079886-13079985)
chr8 (83-165)||(4326033-4326115)
chr8 (137-182)||(28538164-28538211)
chr8 (120-181)||(7207080-7207141)
chr8 (205-266)||(12734060-12734120)
chr8 (137-174)||(36316844-36316881)
chr8 (135-163)||(3194870-3194898)
chr8 (164-259)||(5217616-5217714)
chr8 (108-140)||(12734748-12734780)
[»] chr7 (33 HSPs)
chr7 (96-271)||(4958250-4958431)
chr7 (85-271)||(47841345-47841534)
chr7 (83-267)||(19987175-19987363)
chr7 (91-257)||(36657818-36657986)
chr7 (137-260)||(43302094-43302219)
chr7 (139-271)||(31330406-31330541)
chr7 (109-258)||(36481954-36482105)
chr7 (121-271)||(46747992-46748139)
chr7 (137-265)||(44441609-44441740)
chr7 (109-271)||(36656556-36656720)
chr7 (136-260)||(48767128-48767258)
chr7 (82-271)||(32724243-32724438)
chr7 (83-257)||(39853795-39853969)
chr7 (157-271)||(2008601-2008718)
chr7 (82-190)||(23801752-23801860)
chr7 (138-266)||(23156217-23156347)
chr7 (107-186)||(31322258-31322337)
chr7 (127-266)||(37698505-37698644)
chr7 (143-271)||(29914383-29914515)
chr7 (133-271)||(5513817-5513959)
chr7 (205-273)||(13057880-13057948)
chr7 (134-222)||(30859633-30859723)
chr7 (159-260)||(36901033-36901138)
chr7 (219-266)||(44441347-44441394)
chr7 (142-271)||(25307463-25307595)
chr7 (211-260)||(46282182-46282231)
chr7 (206-256)||(7751858-7751908)
chr7 (133-266)||(48615259-48615395)
chr7 (133-182)||(9429742-9429791)
chr7 (137-182)||(33661475-33661520)
chr7 (139-192)||(38360762-38360815)
chr7 (152-196)||(15017429-15017473)
chr7 (139-167)||(32116887-32116915)
[»] scaffold0036 (2 HSPs)
scaffold0036 (109-240)||(63593-63727)
scaffold0036 (205-260)||(2118-2173)
[»] scaffold0017 (1 HSPs)
scaffold0017 (141-258)||(31782-31901)
[»] scaffold0991 (1 HSPs)
scaffold0991 (209-260)||(2933-2984)
[»] scaffold0040 (1 HSPs)
scaffold0040 (139-174)||(55755-55790)


Alignment Details
Target: chr3 (Bit Score: 449; Significance: 0; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 1 - 500
Target Start/End: Original strand, 13768393 - 13768897
Alignment:
Q  1 tcatttatcaagacaagatattcaaaacattgatgagaagcagaacatattgcctcaactcaagaatcttcttattggtctataagagcatccacaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13768393 tcatttatcaagacaagatattcaaaacattgatgagaagcagaacataatgcctcaactcaagaatcttcttattggtctataagagcatacaaaatgg 13768492  T
Q  101 aggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac 200  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13768493 aggaccccattttttagtacttaaacgggtcccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac 13768592  T
Q  201 actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaaataagagcc-----aataactaaacctta 295  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     |||||||||||||||    
T  13768593 actgcttacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcagtacatatcaaataagagccaagtaaataactaaacctta 13768692  T
Q  296 cttataataggaattctgcacaattctttcttgtggtgtgtactttaacatcctcatacccttcttcggacctcatcatggccaattatatgttccccct 395  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13768693 cttataataggaattctgcacaattctgtcttgtggtgtgtactttaacatcctcatacccttcttcggacctcatcatggccaattatatgttccccct 13768792  T
Q  396 ctgcattcagtgcatcaattacatgtcttgctaatttcatgaaataactgtcaagcatgaaaaatcaactgttttagaaataatcataaattgcataagc 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13768793 ctgcattcagtgcatcaattacatgtcttgctaatttcatgaaataactgtcaagcatgaaaaatcaactgttttagaaataatcataaattgcataaga 13768892  T
Q  496 tttaa 500  Q
    |||||    
T  13768893 tttaa 13768897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 1 - 500
Target Start/End: Original strand, 13754992 - 13755496
Alignment:
Q  1 tcatttatcaagacaagatattcaaaacattgatgagaagcagaacatattgcctcaactcaagaatcttcttattggtctataagagcatccacaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13754992 tcatttatcaagacaagatattcaaaacattgatgagaagcagaacataatgcctcaactcaagaatcttcttattggtctataagagcatacaaaatgg 13755091  T
Q  101 aggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac 200  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13755092 aggaccccattttttagtacttaaacgggtcccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac 13755191  T
Q  201 actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaaataagagcc-----aataactaaacctta 295  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||     |||||||||||||||    
T  13755192 cctgctcacacaaatttcttaaatgggacccaaaaatcaactatcaataactttatatcagtacatatcaaataagagccaagtaaataactaaacctta 13755291  T
Q  296 cttataataggaattctgcacaattctttcttgtggtgtgtactttaacatcctcatacccttcttcggacctcatcatggccaattatatgttccccct 395  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13755292 cttataataggaattctgcacaattctgtcttgtggtgtgtactttaacatcctgatacccttcttcggacctcatcatggccaattatatgttccccct 13755391  T
Q  396 ctgcattcagtgcatcaattacatgtcttgctaatttcatgaaataactgtcaagcatgaaaaatcaactgttttagaaataatcataaattgcataagc 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13755392 ctgcattcagtgcatcaattacatgtcttgctaatttcatgaaataactgtcaagcatgaaaaatcaactgttttagaaataatcataaattgcataaga 13755491  T
Q  496 tttaa 500  Q
    |||||    
T  13755492 tttaa 13755496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 398 - 673
Target Start/End: Original strand, 13733530 - 13733807
Alignment:
Q  398 gcattcagtgcatcaattacatgtcttgctaatttca-tgaaataactgtcaagcatgaaaaatcaactgttttagaaataatcataaattgcataagct 496  Q
    |||||||||||||||||||| ||||||||  | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13733530 gcattcagtgcatcaattacttgtcttgccgacttcactgaaataactgccaagcatgaaaaatcaactgttttagaaataatcataaattgcataagct 13733629  T
Q  497 ttaaactacacaggccaaccactttacattaaactccctaggaat-nnnnnnntcaataaggtaaccagtttttaattgatacaaaaaacttctctgtat 595  Q
    |||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  13733630 ttaaactacacaagccaaccactttacattaaactccctaggaataaaaaaaatcaataaggtaaccagtttttaattgatacaaaaaacttctctgtat 13733729  T
Q  596 gttcatactctgattttaaatgcaaaatcttagacatggtgttatactgttatcaatgacatactatggtttatgatg 673  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||    
T  13733730 gttcatactctgattttaaatgcaaaatcttagacatagtgctatactgctatcaatgacatactattgtttatgatg 13733807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 382 - 526
Target Start/End: Original strand, 13741517 - 13741662
Alignment:
Q  382 tatatgttccccctctgcattcagtgcatcaattacatgtcttgctaatttca-tgaaataactgtcaagcatgaaaaatcaactgttttagaaataatc 480  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |||||  || || ||| ||||||||  |||||| ||| |||||||||||||||    
T  13741517 tatatgttccccctctgcattcagtgcatcaattagatgacttgctgatttcgctggaagaaccgtcaagcacaaaaaataaacagttttagaaataatc 13741616  T
Q  481 ataaattgcataagctttaaactacacaggccaaccactttacatt 526  Q
    ||||||||  |||| ||||| ||||||| |||| ||||||||||||    
T  13741617 ataaattgtgtaagatttaagctacacaagccagccactttacatt 13741662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 46049082 - 46048899
Alignment:
Q  88 gcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataatttttt-aatagtagtacttaataagaac 186  Q
    |||||||||||||||  | |||||||| |||||||||| ||||  ||| |||| |||| |||||||||||||||||| |||| |||||| ||||||| |     
T  46049082 gcatccacaatggagacctccatttttaagtacttaaatgggtctcacatgtaaacattactcatttataatttttttaatattagtacctaataagtat 46048983  T
Q  187 tcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacata 267  Q
     ||||||||| ||| | ||   ||||||||| ||||||||||| || ||||||||||||||||||||||||||| || ||||||    
T  46048982 ccaatccctccaactcagcatctcacacaaagttcttaaatggaactcacaaatcaactatcaataactttataccattacata 46048899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 35539742 - 35539614
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacc 230  Q
    ||||||||||||||| | ||||||||||||||||||||||||| ||||||  |||| ||| ||| |||   |  |||||||||| |||||||||||||||    
T  35539742 cacgtgtacacatcatttatttataattttttaatagtagtacctaataaacactcgatcactccaaccaagatctcacacaaagttcttaaatgggacc 35539643  T
Q  231 cacaaatcaactatcaataactttatatc 259  Q
    ||  |||||||||||||||||||||||||    
T  35539642 cattaatcaactatcaataactttatatc 35539614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 46006050 - 46006178
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||| ||| ||| | |  || ||||||| |||||||||  ||||    
T  46006050 cacgtgtacacatcactcatttataattttttaatagtagtacctaataa-cattcaatcactccaacccagatcttacacaaagttcttaaatttgacc 46006148  T
Q  231 cacaaatcaactatcaataactttatatca 260  Q
    ||  ||||||||||||||||||||||||||    
T  46006149 cagtaatcaactatcaataactttatatca 46006178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 41212130 - 41212000
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaa 235  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||| | | |||||||| ||    ||  |||| |||| ||||||||||| |||  || |    
T  41212130 tacacataactcatttataattttgtaatagtagtacctaataagcagtaaatccctccaatcgaacatctcatacaagtttcttaaatgagacatacta 41212031  T
Q  236 atcaactatcaataactttatatcaatacat 266  Q
    ||||||||||||||||||||||||| |||||    
T  41212030 atcaactatcaataactttatatcattacat 41212000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 45603382 - 45603522
Alignment:
Q  109 attttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaa---cactgc 205  Q
    ||||||| ||||||||| | ||  ||||| ||||||||| |||||||||||||| ||||| |||||||||||||  |||||||||||  ||    ||  |    
T  45603382 attttttggtacttaaatgagtctcacgtatacacatcattcatttataattttataataatagtacttaataaacactcaatcccttaaatccaacatc 45603481  T
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatca 246  Q
    |||||||||||| ||||||| ||||||| |||||| |||||    
T  45603482 tcacacaaattttttaaatgtgacccactaatcaaatatca 45603522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 13741404 - 13741490
Alignment:
Q  281 aataactaaaccttacttataataggaattctgcacaattcttt--cttgtggtgtgtactttaacatcctcatacccttcttcgga 365  Q
    ||||| |||| |||||||||||||||||||||||||||||||||  || |||   ||||||| |||| |||||||||||||||||||    
T  13741404 aataattaaatcttacttataataggaattctgcacaattctttgtctcgtgccatgtacttaaacaccctcatacccttcttcgga 13741490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 36619327 - 36619273
Alignment:
Q  117 gtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagta 171  Q
    ||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||    
T  36619327 gtacttaaatgggtctcacgtgtacacatcactgatttataattttttaatagta 36619273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 44111006 - 44110945
Alignment:
Q  110 ttttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagta 171  Q
    ||||| |||||||||| ||||  ||||||||||||| | |||||||||||||||||||||||    
T  44111006 tttttaagtacttaaatgggtcacacgtgtacacataattcatttataattttttaatagta 44110945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 52744666 - 52744751
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatcc 193  Q
    ||||||||| |||||||| | ||  ||||||||||||| ||| |||||||||||||||||||||  || ||| ||| |||||||||    
T  52744666 cattttttactacttaaatgagtctcacgtgtacacattacttatttataattttttaatagtaacacctaacaagtactcaatcc 52744751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 362
Target Start/End: Original strand, 13733398 - 13733481
Alignment:
Q  281 aataactaaaccttacttataataggaattctgcacaattctt--tcttgtggtgtgtactttaacatcctcatacccttcttc 362  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  ||| | | | ||||||| |||||| |||| |||||||||    
T  13733398 aataactaaatcttacttataataggaattctgcgcaattctttgtctcgggctatgtacttcaacatcttcatgcccttcttc 13733481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 26085232 - 26085176
Alignment:
Q  111 tttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaat 167  Q
    ||||| ||||||||| ||||  ||||||||||||||| |||||||||||||||||||    
T  26085232 tttttggtacttaaatgggtctcacgtgtacacatcattcatttataattttttaat 26085176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 28197595 - 28197552
Alignment:
Q  128 ggttccacgtgtacacatcactcatttataattttttaatagta 171  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  28197595 ggtttcacgtgtacacatcactcattcataattttttaatagta 28197552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 40485050 - 40485113
Alignment:
Q  120 cttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataag 183  Q
    |||| |||||| ||||||||| |||||| || ||||||||||||||||| |||||| |||||||    
T  40485050 cttagacgggtcccacgtgtaaacatcattcttttataattttttaataatagtacctaataag 40485113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 54422796 - 54422741
Alignment:
Q  211 caaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    ||||||||||||||| ||||||| |||||| ||||||||| ||||||||| |||||    
T  54422796 caaatttcttaaatgagacccactaatcaattatcaataattttatatcattacat 54422741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 54425604 - 54425529
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataag 183  Q
    ||||||| |||| ||||| ||||  |||||||||| || | ||||||||| ||||||||||||||||| |||||||    
T  54425604 catttttaagtatttaaatgggtcacacgtgtacatattattcatttatagttttttaatagtagtacctaataag 54425529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 13741314 - 13741387
Alignment:
Q  8 tcaagacaagatattcaaaacattgatgagaagcagaacata--ttgcctcaactcaagaatcttcttattggt 79  Q
    |||| ||||||||||||||||||||||||| |||| ||||||  |||| ||||| |||||||||| ||| ||||    
T  13741314 tcaaaacaagatattcaaaacattgatgaggagcaaaacataatttgcttcaacgcaagaatctttttaatggt 13741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 29950766 - 29950816
Alignment:
Q  142 acatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    |||||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  29950766 acatcactcatttatatttttttaatagtagtatctaataagcactcaatc 29950816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 29999920 - 29999970
Alignment:
Q  142 acatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    |||||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  29999920 acatcactcatttatatttttttaatagtagtatctaataagcactcaatc 29999970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 40242156 - 40242214
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaat 191  Q
    |||||||| | |||||| ||||||||||||||||||||| ||| ||||||| |||||||    
T  40242156 cacgtgtatatatcacttatttataattttttaatagtaatacctaataagcactcaat 40242214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 52995699 - 52995753
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||||||| ||||||| |||  || ||||||||||||||||||||||||||    
T  52995699 tcacacaaatttgttaaatgagacatactaatcaactatcaataactttatatca 52995753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 55222656 - 55222602
Alignment:
Q  120 cttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagta 174  Q
    |||||| ||||  |||||||||| |||| ||||||||||||||||||||||||||    
T  55222656 cttaaatgggtctcacgtgtacatatcagtcatttataattttttaatagtagta 55222602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 13733309 - 13733353
Alignment:
Q  5 ttatcaagacaagatattcaaaacattgatgagaagcagaacata 49  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||    
T  13733309 ttatcaaaacaagatattcaaaacattgatgaggaccagaacata 13733353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 24744342 - 24744445
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    |||||||||||||||||| |||  | |||  ||| ||||||  |||  |||||||||||||||||| |||||||| ||||||||  ||| |||||||||     
T  24744342 agagcatccacaatggagatcctgaatttggagttcttaaataggtctcacgtgtacacatcactcttttataatcttttaataacagt-cttaataagc 24744440  T
Q  185 actca 189  Q
    |||||    
T  24744441 actca 24744445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 33831986 - 33832046
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaataca 265  Q
    |||||||||||||||| ||||| | |||| |||||||||||||||| || |||||| ||||    
T  33831986 ctcacacaaatttctttaatggaatccactaatcaactatcaataatttcatatcattaca 33832046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 26085144 - 26085093
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttata 257  Q
    ||||| |||||||||||||||||| |||  |||||| |||||||||||||||    
T  26085144 tcacataaatttcttaaatgggacacacttatcaaccatcaataactttata 26085093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 36277738 - 36277863
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaa-tttcttaaatgggacccaca 234  Q
    |||||| |||| ||||||||||||||||||||| ||  ||||||| | ||||| |||| ||| | |   |||||||||| ||| ||||||   ||||||     
T  36277738 tacacagcactaatttataattttttaatagtaatatctaataagtattcaattcctccaactcagcatctcacacaaatttttttaaattaaacccact 36277837  T
Q  235 aatcaactatcaataactttatatca 260  Q
    ||| || |||||||||||||||||||    
T  36277838 aataaaatatcaataactttatatca 36277863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 36902369 - 36902424
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||| ||||||||||||||||  |  ||| ||||||||||||||||||||||||||    
T  36902369 ctcaaacaaatttcttaaatgaaattcactaatcaactatcaataactttatatca 36902424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 40861203 - 40861270
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac 200  Q
    |||||||| ||||||  |||||||||||||||||| ||||||  ||||||| | |||||| |||||||    
T  40861203 cacgtgtatacatcatccatttataattttttaattgtagtatctaataagtattcaatctctctaac 40861270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 55272908 - 55272857
Alignment:
Q  147 actcatttataattttttaatagtagtacttaataagaactcaatccctcta 198  Q
    |||||||||||||||||||||| |||||| ||||||  |||||||| |||||    
T  55272908 actcatttataattttttaataatagtacataataaacactcaatcactcta 55272857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 106382 - 106428
Alignment:
Q  136 gtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||| |||| ||||||| |||||||||||||| |||||||||||||    
T  106382 gtgtatacatgactcattaataattttttaataatagtacttaataa 106428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 3973232 - 3973290
Alignment:
Q  134 acgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    ||||||||||  ||||||||||||| |||||||||||| |||||| |||  ||||||||    
T  3973232 acgtgtacacgacactcatttataaatttttaatagtaatacttagtaaacactcaatc 3973290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 3996644 - 3996586
Alignment:
Q  134 acgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    ||||||||||  ||||||||||||| |||||||||||| |||||| |||  ||||||||    
T  3996644 acgtgtacacgacactcatttataaatttttaatagtaatacttagtaaacactcaatc 3996586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 4010183 - 4010125
Alignment:
Q  134 acgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    ||||||||||  ||||||||||||| |||||||||||| |||||| |||  ||||||||    
T  4010183 acgtgtacacgacactcatttataaatttttaatagtaatacttagtaaacactcaatc 4010125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 43584634 - 43584601
Alignment:
Q  136 gtgtacacatcactcatttataattttttaatag 169  Q
    ||||| ||||||||||||||||||||||||||||    
T  43584634 gtgtaaacatcactcatttataattttttaatag 43584601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 1151543 - 1151595
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaat 191  Q
    ||||||||||| ||||||||| ||||||||  |||||||| |||| |||||||    
T  1151543 tacacatcacttatttataatattttaataaaagtacttattaaggactcaat 1151595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 85 - 271
Target Start/End: Complemental strand, 43822976 - 43822788
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    |||||||||||||||||| | |||||||||| || |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||     
T  43822976 agagcatccacaatggagatacccattttttggttcttaaatgggtcccacgcgtacacatcactcatttataattttttaatagtagtatctaataagc 43822877  T
Q  185 actcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||||||| |||| ||| | |  |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  43822876 actcaattcctccaacccagatctcacacaaagttcttaaatgggacccactaatcaactatcaataactttatatcactacatttcaa 43822788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 85 - 271
Target Start/End: Complemental strand, 13984238 - 13984050
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    ||||||||||||||||||    |||||||| ||| |||||| |||| |||||  |||||||||| |||||||||||||||||||||||||  |||||||     
T  13984238 agagcatccacaatggagacatccatttttaagttcttaaatgggtcccacgcatacacatcacacatttataattttttaatagtagtatctaataagt 13984139  T
Q  185 actcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||| ||||||| | |  |||||||||| |||||||||| |||| || |||||||||||||||||||||||||| ||||| ||||    
T  13984138 actcaatctctctaacccagatctcacacaaaattcttaaatgagacctactaatcaactatcaataactttatatcactacatttcaa 13984050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 117 - 271
Target Start/End: Original strand, 52353744 - 52353900
Alignment:
Q  117 gtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaa-ca-ctgctcacacaaa 214  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||| ||||||| || || |  ||||||||||    
T  52353744 gtacttaaatgggtcccacgtgtacacatcactaatttataattttttaatagcagtacctaataagcactcgatccctccaagcagcatctcacacaaa 52353843  T
Q  215 tttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||| | |||||| |||||||||||||||||||||||||| ||||| ||||    
T  52353844 tttcttaaatagaacccactaatcaactatcaataactttatatcattacatttcaa 52353900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 107 - 266
Target Start/End: Complemental strand, 25813914 - 25813753
Alignment:
Q  107 ccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg-- 204  Q
    ||||||||  || ||||||  ||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||  |||||| ||| | |      
T  25813914 ccatttttgggttcttaaataggtcccacgcgtacacatcactcatttataattttttaatagaagtacataataagtactcggtccctccaacccagat 25813815  T
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    ||||| |||| |||||||||| ||||||| |||||||||||||||| ||||||||| |||||    
T  25813814 ctcacgcaaagttcttaaatgagacccactaatcaactatcaataattttatatcactacat 25813753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 91 - 266
Target Start/End: Complemental strand, 36167085 - 36166909
Alignment:
Q  91 tccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaa 190  Q
    ||||||||||||  |  ||||||||||| |||||| |||| |||| ||||||||||| | ||||||||||||||||| ||||||| ||||||  ||||||    
T  36167085 tccacaatggagaccttcattttttagttcttaaatgggtcccacatgtacacatcatttatttataattttttaat-gtagtacctaataattactcaa 36166987  T
Q  191 tccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    | |||| |||   | || ||||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||| |||||    
T  36166986 ttcctccaacctaaatg-tcacacaaaattcttaaattggactcactaataaactatcaataactttatatcactacat 36166909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 85 - 260
Target Start/End: Original strand, 51504456 - 51504634
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    |||||||| | |||||||  |||||||| || || |||||| ||||  |||||||| |||||||||||||||||||||||||||||||||| || ||||     
T  51504456 agagcatctaaaatggagacccccatttgttggtgcttaaatgggtctcacgtgtatacatcactcatttataattttttaatagtagtacgtattaagt 51504555  T
Q  185 actcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||| |||| |||    |  | ||||||| |||||||||| ||||||||  ||||||||| ||||| |||||||||    
T  51504556 actcaattcctccaacccatcatcccacacaagtttcttaaataggacccacttatcaactattaataattttatatca 51504634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 83 - 255
Target Start/End: Complemental strand, 27544574 - 27544400
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||||||||||||||||||   || ||||||| ||||||||| ||||  || ||||||||||||||||||||||||||||||||| ||| |  ||||||    
T  27544574 taagagcatccacaatggagacgccaattttttggtacttaaatgggtctcatgtgtacacatcactcatttataattttttaataatagcatctaataa 27544475  T
Q  183 gaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataacttta 255  Q
    | |||||||||||| ||| | |  || ||||| | |||||||||| ||||||  || ||| ||||| ||||||||    
T  27544474 gcactcaatccctccaacccagatctgacacacagttcttaaatgagacccattaaacaattatcactaacttta 27544400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 43506463 - 43506270
Alignment:
Q  82 ataagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataatt-ttttaatagtagtacttaat 180  Q
    ||||||||||||||||| |||     |||||||| |||||||||  |||| || ||||| |||||| |||||||||||| |||||||| ||||||||| |    
T  43506463 ataagagcatccacaattgagacaatcattttttggtacttaaataggttacatgtgtagacatcattcatttataatttttttaatattagtacttagt 43506364  T
Q  181 aagaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||| |||||||||||| |||   ||   |||||||||||| ||||||  ||| ||| |||||||||||||||||||||||| | ||||| ||||    
T  43506363 aagcactcaatccctccaaccaaacatttcacacaaatttattaaatttgactcactaatcaactatcaataactttatattattacatttcaa 43506270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 110 - 271
Target Start/End: Original strand, 43675143 - 43675309
Alignment:
Q  110 ttttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaat--aagaactcaatccctctaac---actg 204  Q
    |||||| |||||||||  |||| || |||||||||||||||||||||||||||||||| |||||| |||||  ||||  |||||||||| |||   |       
T  43675143 ttttttggtacttaaataggtttcatgtgtacacatcactcatttataattttttaattgtagtatttaataaaagagttcaatccctccaacccaatat 43675242  T
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    || |||||||||| ||||| |||||| |||||| ||||||||| |||||||||||| | ||||||||    
T  43675243 cttacacaaattttttaaacgggaccaacaaattaactatcaacaactttatatcattgcatatcaa 43675309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 83 - 257
Target Start/End: Original strand, 49003286 - 49003462
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||||| |||||||  | |||||||| | || |||||  |||  ||| ||||||||| |||| |||||||||||||||||||| ||| ||||||    
T  49003286 taagagcatccataatggagacctccatttttgaatatttaaataggtctcacatgtacacattactc-tttataattttttaatagtaatacctaataa 49003384  T
Q  183 gaactcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttata 257  Q
    | | |||||| ||| |||   ||   ||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  49003385 gtattcaatctctccaaccgagcatctcacacaaaattcttaaattagacccacaaatcaactatcaataactttata 49003462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 111 - 260
Target Start/End: Original strand, 32451708 - 32451858
Alignment:
Q  111 tttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgctcaca 210  Q
    |||| ||| |||||| ||||  ||||| ||||||||||| ||||||||||||||||||||| ||| ||||||| | |||||| ||| ||| | | || ||    
T  32451708 ttttgagttcttaaatgggtctcacgtttacacatcactaatttataattttttaatagtaatacctaataagcattcaatcactccaactcagatctca 32451807  T
Q  211 c-aaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    | ||| |||||||||| ||||||| ||| || |||||||||||||||||||    
T  32451808 caaaagttcttaaatgagacccactaataaattatcaataactttatatca 32451858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 42831794 - 42831662
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccac 233  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||    |  |||||| |||||||||||||| || |||     
T  42831794 tgtacatattactcatttataattttttaatagtagtacctaataagaactaaattcctccaacctagcatctcacaaaaatttcttaaatgagatccat 42831695  T
Q  234 aaatcaactatcaataactttatatcaatacat 266  Q
     |||||||||||||||| ||||||||| |||||    
T  42831694 taatcaactatcaataattttatatcattacat 42831662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 23333901 - 23333785
Alignment:
Q  144 atcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaac 241  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| ||| ||| | |  |||||||| | |||||||||| ||| |||  |||||     
T  23333901 atcactcatttataattttttaataatagtacttaataagcactcaatcactccaacccagatctcacacacagttcttaaatgagactcactgatcaaa 23333802  T
Q  242 tatcaataactttatat 258  Q
    |||||||||||||||||    
T  23333801 tatcaataactttatat 23333785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 32851731 - 32851871
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacc 230  Q
    |||| |||||||||||||||||| ||||||||||||||||||  ||||||| | ||||| |||| | | | |  ||| ||| || ||||||||||||||     
T  32851731 cacgcgtacacatcactcatttacaattttttaatagtagtatctaataagcaatcaattcctccatcccagatctcccacgaagttcttaaatgggaca 32851830  T
Q  231 cacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||| |||||||||||||||| ||||||||| ||||| ||||    
T  32851831 cactaatcaactatcaataattttatatcactacatttcaa 32851871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 132 - 260
Target Start/End: Complemental strand, 11120705 - 11120575
Alignment:
Q  132 ccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggac 229  Q
    |||||| |||||||||||||||||||||| |||||||||||||  ||||||  |||||||  ||| ||| | |  |||||||||| |||||||||   |     
T  11120705 ccacgtatacacatcactcatttataattctttaatagtagtatctaataaacactcaattactccaacgcagatctcacacaaagttcttaaatacaat 11120606  T
Q  230 ccacaaatcaactatcaataactttatatca 260  Q
    |||| ||||||||||||||||||||||||||    
T  11120605 ccactaatcaactatcaataactttatatca 11120575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 38902166 - 38902061
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||| |||||||||||   | |||||||  || |||||| ||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  38902166 taagagcacccacaatggagacactcatttttgggttcttaaatgggtctcacgtgtacatatcactcatttataattttttaatagtagtacctaataa 38902067  T
Q  183 gaactc 188  Q
    | ||||    
T  38902066 gcactc 38902061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 260
Target Start/End: Original strand, 47783612 - 47783754
Alignment:
Q  120 cttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaa--cactgctcacacaaattt 217  Q
    |||||| ||||  ||||||||||||||| |  ||||||||||||||||| ||||| |||||||  |||||||| ||| ||  ||   |||||||||| ||    
T  47783612 cttaaatgggtctcacgtgtacacatcatttgtttataattttttaataatagtatttaataaacactcaatcactccaactcaaatctcacacaaagtt 47783711  T
Q  218 cttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||| ||| |  |||||||||||||||| |||||||||    
T  47783712 cttaaatggaacctattaatcaactatcaataattttatatca 47783754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 38600939 - 38601069
Alignment:
Q  139 tacacatcactcatttataat-tttttaatagtagtacttaataagaactcaatccctctaa-ca--ctgctcacacaaatttcttaaatgggacccaca 234  Q
    ||||||||||||||||||||  |||||||||||| ||  ||||||| |||||||||||  || ||  |  ||||||||||||| |||||||| ||||||     
T  38600939 tacacatcactcatttataaaatttttaatagtaatatctaataagtactcaatcccttcaatcaagcatctcacacaaattttttaaatgg-acccact 38601037  T
Q  235 aatcaactatcaataactttatatcaatacat 266  Q
    |||||| ||||||||||||||||||| |||||    
T  38601038 aatcaattatcaataactttatatcattacat 38601069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 137 - 271
Target Start/End: Original strand, 51061595 - 51061733
Alignment:
Q  137 tgtacacatcactcatttataatttttt-aatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggaccca 232  Q
    ||||| ||||||| || ||||||||||| ||||||||||||||||||  |||||||| ||| |||   |    | ||||||||||||||||||||||||     
T  51061595 tgtacgcatcacttatatataatttttttaatagtagtacttaataaatactcaatctctccaacctagtattttacacaaatttcttaaatgggacccg 51061694  T
Q  233 caaatcaactatcaataactttatatcaatacatatcaa 271  Q
    | |||| ||||||||||||||| ||||| ||||| ||||    
T  51061695 ctaatctactatcaataactttctatcattacatttcaa 51061733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 36298132 - 36297995
Alignment:
Q  137 tgtacacatcactcatttataatttttt-aatagtagtacttaataagaactcaatccctctaacactg-ctcacacaaa--tttcttaaatgggaccca 232  Q
    ||||||| ||||| |||||||||||||| |||| ||||| ||||||||||||||||||||  |||   |  |||||||||  |||||||||||||  |||    
T  36298132 tgtacacgtcacttatttataatttttttaataatagtatttaataagaactcaatccctacaacctagtatcacacaaaagtttcttaaatggg-gcca 36298034  T
Q  233 caaatcaactatcaataactttatatcaatacatatcaa 271  Q
    | |||||||||||||||| ||||||||| ||||| ||||    
T  36298033 ctaatcaactatcaataattttatatcattacatttcaa 36297995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 11241450 - 11241580
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggac 229  Q
    ||||| |||||| ||||||||||||||||||||||| |||||| ||||||  || |||| |||| ||  |      |||||||||||| ||||| || |     
T  11241450 cacgtatacacaccactcatttataattttttaatattagtacataataaacacccaattcctccaatccataatttcacacaaattttttaaaaggtat 11241549  T
Q  230 ccacaaatcaactatcaataactttatatca 260  Q
    |||| ||||||||||||||||||||||||||    
T  11241550 ccactaatcaactatcaataactttatatca 11241580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 189
Target Start/End: Complemental strand, 42401199 - 42401096
Alignment:
Q  86 gagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaa 185  Q
    |||||||||||||||||   | || |||  ||| ||||||||| | ||| ||||||||||||||| |||||||||||||||||  ||||| ||||||| |    
T  42401199 gagcatccacaatggagactctcaatttggagttcttaaacggatcccatgtgtacacatcactcttttataattttttaataacagtacctaataagca 42401100  T
Q  186 ctca 189  Q
    ||||    
T  42401099 ctca 42401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 266
Target Start/End: Complemental strand, 22680556 - 22680396
Alignment:
Q  109 attttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgc 205  Q
    |||||| | |||||||| ||||||||| | ||||||||||||||||||| | |||||| ||||||||  |||||  ||| |||||||| |||   |   |    
T  22680556 atttttgaatacttaaatgggttccacatatacacatcactcatttatagtattttaaaagtagtaccgaataaatacttaatccctccaactcaatatc 22680457  T
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||||||||||||| ||| |||| ||   ||||| ||| |||||| ||||||||| |||||    
T  22680456 tcacacaaatttctgaaacgggaaccgttaatcatctaccaataattttatatcattacat 22680396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 11569964 - 11570029
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||| ||||| |||  |  |||||||||||||||||||||||||| ||||| ||||    
T  11569964 tcacacaaatttctcaaatgagacttattaatcaactatcaataactttatatcattacatttcaa 11570029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 42009260 - 42009183
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataatttt 162  Q
    |||||||||| ||| ||||| | |||||||||||||||||| | ||  ||| | ||||||| ||||||||||||||||    
T  42009260 agagcatccataatagaggtactcattttttagtacttaaatgagtcacacatatacacatgactcatttataatttt 42009183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 641832 - 641868
Alignment:
Q  235 aatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||||||||||||||| ||||||||||    
T  641832 aatcaactatcaataactttatatcattacatatcaa 641868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 1745196 - 1745152
Alignment:
Q  139 tacacatcactcatttataatttttt-aatagtagtacttaataa 182  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  1745196 tacacatcactcatttatattttttttaatagtagtacttaataa 1745152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 9505536 - 9505592
Alignment:
Q  212 aaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatat 268  Q
    |||||||||||| | |||| || |||||||||||||||||||||||| | |||||||    
T  9505536 aaatttcttaaacgagacctactaatcaactatcaataactttatattattacatat 9505592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 11566926 - 11566986
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||||||||||||| ||||| |||  |  |||||||||||||||||||||||||| |||||    
T  11566926 tcacacaaatttctcaaatgagacttattaatcaactatcaataactttatatcattacat 11566986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 168
Target Start/End: Original strand, 33326201 - 33326236
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaata 168  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33326201 cacgtgtgcacatcactcatttataattttttaata 33326236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 33780523 - 33780582
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    |||||||||||||||| | |||||||||||||||||  ||||  ||||||| ||||||||    
T  33780523 cacgtgtacacatcacacttttataattttttaataacagtatataataagcactcaatc 33780582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 40287033 - 40287084
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttat 256  Q
    |||||||||| || ||||||||||||| | |||||||||||||||| |||||    
T  40287033 ctcacacaaagttattaaatgggacccgctaatcaactatcaataattttat 40287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 51263264 - 51263217
Alignment:
Q  209 cacaaatttcttaaatgggacccacaaatcaactatcaataactttat 256  Q
    |||||||||||||||||  || ||| ||||||||||||||||||||||    
T  51263264 cacaaatttcttaaatgaaacacactaatcaactatcaataactttat 51263217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 47364475 - 47364363
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggac 229  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||  ||||||  ||| |||| ||  |||    |  ||||||||||||||||||||| |||    
T  47364475 cacgtgttcacattactcatttataatttttaaatagtagtatataataaatacttaatcacttcaactgagcatctcacacaaatttcttaaatgagac 47364376  T
Q  230 ccacaaatcaact 242  Q
     ||| ||||||||    
T  47364375 acactaatcaact 47364363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 19415424 - 19415375
Alignment:
Q  151 atttataattttttaatagtagtacttaataagaactcaatccctctaac 200  Q
    |||||||||||||||||||||||| |||||||| | | |||| |||||||    
T  19415424 atttataattttttaatagtagtatttaataagcattaaatctctctaac 19415375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 37524181 - 37524214
Alignment:
Q  142 acatcactcatttataattttttaatagtagtac 175  Q
    |||||| |||||||||||||||||||||||||||    
T  37524181 acatcattcatttataattttttaatagtagtac 37524214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 50011433 - 50011470
Alignment:
Q  131 tccacgtgtacacatcactcatttataattttttaata 168  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  50011433 tccacgtgtacatatcacttatttataattttttaata 50011470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 23655162 - 23655202
Alignment:
Q  142 acatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||| | |||||||||||||||||| |||||||||||||    
T  23655162 acatcatttatttataattttttaataatagtacttaataa 23655202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 35604507 - 35604559
Alignment:
Q  118 tacttaaacgggttccacgtgtacacatcactcatttataattttttaatagt 170  Q
    |||||||||| ||  ||| |||||||||||||| |||||||||| ||||||||    
T  35604507 tacttaaacgagtctcacttgtacacatcactcgtttataatttgttaatagt 35604559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 3e-50; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 83 - 271
Target Start/End: Original strand, 41520783 - 41520974
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||||||||||||||||||    ||||||||| || |||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  41520783 taagagcatccacaatggagacatccattttttggttcttaaatgggtttcacgtgtacacatcacttatttataattttttaatagtggtacctaataa 41520882  T
Q  183 gaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||| ||| | |   |||||||||| ||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  41520883 gaactcaatccctccaacccagcatctcacacaaagttcctaaatgggacccacaaattaactatcaataactttataccattacatatcaa 41520974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 83 - 260
Target Start/End: Original strand, 18396440 - 18396619
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||| |||||||||    ||||||||  ||  ||||| ||||  |||| ||||||||| ||||||||||||||||||||| |||||| ||||||    
T  18396440 taagagcatctacaatggagacatccatttttgggtttttaaatgggtcacacgcgtacacatccctcatttataattttttaataatagtacctaataa 18396539  T
Q  183 gaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
      ||||||| ||||||||   |  ||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||    
T  18396540 atactcaattcctctaacttggatctcacacaaaaatcttaaatgggacccaccaatcaactataaataactttatatca 18396619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 26675455 - 26675580
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccaca 234  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||| ||||| || ||| | |  |||||| |||||||||||||  |||||||     
T  26675455 tgtacacatcactcatttataattttttaatagtagtatcttataagcacttaatccttccaactcagatctcacataaatttcttaaattagacccact 26675554  T
Q  235 aatcaactatcaataactttatatca 260  Q
    |||||| |||||||||||||||||||    
T  26675555 aatcaaatatcaataactttatatca 26675580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 26947063 - 26947188
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccaca 234  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||| ||||| || ||| | |  |||||| |||||||||||||  |||||||     
T  26947063 tgtacacatcactcatttataattttttaatagtagtatcttataagcacttaatccttccaactcagatctcacataaatttcttaaattagacccact 26947162  T
Q  235 aatcaactatcaataactttatatca 260  Q
    |||||| |||||||||||||||||||    
T  26947163 aatcaaatatcaataactttatatca 26947188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 133 - 266
Target Start/End: Complemental strand, 12593278 - 12593143
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctc--taacactgctcacacaaatttcttaaatgggacc 230  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||| |||| |     |||  |||| |||||||||||||||| ||||    
T  12593278 cacgtgtacacatcactcatttataactttttaatagtagtatctaataagtactcattcccccatccccacgtctcaaacaaatttcttaaatgagacc 12593179  T
Q  231 cacaaatcaactatcaataactttatatcaatacat 266  Q
     || |||||| ||||||||||||||||||| |||||    
T  12593178 aactaatcaattatcaataactttatatcattacat 12593143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 145 - 258
Target Start/End: Complemental strand, 2375688 - 2375573
Alignment:
Q  145 tcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaact 242  Q
    ||||| ||||||||||||||||||||||||| ||||||  | |||||| ||| | | |    |||||||||| |||||||||||||||||| ||||||||    
T  2375688 tcacttatttataattttttaatagtagtacctaataaacattcaatcactcaacctcaaatctcacacaaagttcttaaatgggacccactaatcaact 2375589  T
Q  243 atcaataactttatat 258  Q
    ||||||||||||||||    
T  2375588 atcaataactttatat 2375573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 112 - 260
Target Start/End: Original strand, 35463177 - 35463329
Alignment:
Q  112 ttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatcc-ctctaac---actgctc 207  Q
    |||| ||||||||| || ||| || |||| |||| |||| |||||||||||||||||||||||| ||||||| |||||||||  || |||   ||  |||    
T  35463177 ttttggtacttaaatggattctacatgtatacatgactcgtttataattttttaatagtagtacctaataagtactcaatcctttcaaacccaacatctc 35463276  T
Q  208 acacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||||||||||||  |  || ||||||||||||||||| |||||||||    
T  35463277 acacaaatttcttaaatgaaattcataaatcaactatcaataattttatatca 35463329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 86 - 271
Target Start/End: Complemental strand, 7293245 - 7293058
Alignment:
Q  86 gagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaa 185  Q
    ||||||||||||| ||| |  ||||||||  || |||||| |||| ||||| || ||||||| ||||||||||||||||||||||| ||| | ||||| |    
T  7293245 gagcatccacaatagagatatccatttttgggttcttaaatgggtcccacgcgtgcacatcattcatttataattttttaatagtaataccttataagta 7293146  T
Q  186 ctcaatccctctaa--cactgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
     ||| ||||||  |  ||   |||||||||| || |||||| |||| ||| ||| ||||||||||||| |||||||| ||||| ||||    
T  7293145 ttcattccctccgacccaaatctcacacaaagtttttaaataggactcactaattaactatcaataacattatatcattacatttcaa 7293058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 110 - 266
Target Start/End: Complemental strand, 29558512 - 29558354
Alignment:
Q  110 ttttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ct 206  Q
    |||||||||||||||| |  |  || |||||||||||||||||||| |||||||||||| |||||| ||||||| ||| |||| ||  ||| | |   ||    
T  29558512 ttttttagtacttaaatgaatcacatgtgtacacatcactcatttacaattttttaataatagtac-taataagcacttaatctcttcaactcagcatct 29558414  T
Q  207 cacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    ||||||||||||||||||  || | |  |||||||||||||||| ||||||||| |||||    
T  29558413 cacacaaatttcttaaataagatctaataatcaactatcaataattttatatcattacat 29558354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 42551051 - 42551145
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaat 224  Q
    ||||||||||||||| |||||||||||||||||||| |||||| ||||||| | |||||||||| |||    |  ||||||||||||||||||||    
T  42551051 cacgtgtacacatcattcatttataattttttaataatagtacataataagcaatcaatccctcaaacctagcatctcacacaaatttcttaaat 42551145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 33133236 - 33133346
Alignment:
Q  150 catttataattttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatca 246  Q
    ||||||||| |||||||||||| || ||| |||| |||||||| ||| ||| | ||   |||||||||||||||||||  ||| ||| ||||||||||||    
T  33133236 catttataaatttttaatagtaatattta-taagcactcaatctctcaaactcagcatctcacacaaatttcttaaataagactcactaatcaactatca 33133334  T
Q  247 ataactttatat 258  Q
    ||||||||||||    
T  33133335 ataactttatat 33133346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 13420681 - 13420807
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacc 230  Q
    ||||| || |||||||| |||| |||||||| |||||| |||||||||||  |||| ||| ||| |||   |  |||||||||| || |||||||||||     
T  13420681 cacgtatatacatcacttatttgtaattttt-aatagtggtacttaataatcactcgatcactccaacttagatctcacacaaagttgttaaatgggact 13420779  T
Q  231 cacaaatcaactatcaataactttatat 258  Q
    ||| ||||||||||||||||||||||||    
T  13420780 cactaatcaactatcaataactttatat 13420807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 260
Target Start/End: Original strand, 1309733 - 1309863
Alignment:
Q  132 ccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaa--cactgctcacacaaatttcttaaatgggac 229  Q
    ||||||||| | |||| | |||||||||||||||||| |||||  ||||||| |||||||| ||| ||  ||   |||||||||| ||||||||| |||     
T  1309733 ccacgtgtatatatcatttatttataattttttaataatagtatctaataagcactcaatcactccaatccaaatctcacacaaagttcttaaattggat 1309832  T
Q  230 ccacaaatcaactatcaataactttatatca 260  Q
     ||| |||||| ||||||||| |||||||||    
T  1309833 acactaatcaattatcaataattttatatca 1309863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 3558881 - 3558800
Alignment:
Q  177 taataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatcaataacttta 255  Q
    |||||||||||||||||||| ||  | ||   ||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  3558881 taataagaactcaatccctccaatccagcatgtcacacaaatttcataaatgggacccattaatcaactatcaataacttta 3558800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 2970351 - 2970393
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaata 181  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  2970351 tacacatcactcatttataattttttaatagtagtacataata 2970393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 268
Target Start/End: Complemental strand, 11200906 - 11200751
Alignment:
Q  118 tacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtact--taataagaactcaatccctctaa---cactgctcacaca 212  Q
    |||||||| ||||| |||||||||||||||| | |||||||||||||||| |||| |||  ||||||  ||||||| |||||||    ||  ||||||||    
T  11200906 tacttaaatgggttacacgtgtacacatcacacgtttataattttttaattgtagcactcctaataaacactcaattcctctaatctaacatctcacaca 11200807  T
Q  213 aatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatat 268  Q
    || ||||| |||  |||| |   ||||||||||||||| ||||||| | |||||||    
T  11200806 aaattcttgaataagacctattgatcaactatcaataattttatattattacatat 11200751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 14731065 - 14731007
Alignment:
Q  121 ttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaa 179  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||  |||||||||    
T  14731065 ttaaacgggtttcacgtgtatacgtcactcatttataattttttaataacagtacttaa 14731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 42951699 - 42951753
Alignment:
Q  142 acatcactcatttataattttttaatagtagtacttaataagaactcaatccctc 196  Q
    ||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||    
T  42951699 acatcactcatttataattttgtaataatagtacataataagtactcaatccctc 42951753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 4935244 - 4935172
Alignment:
Q  118 tacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaa 190  Q
    ||||||||||  || ||||||||||||||||| |||||||| ||||||| ||| |||||||||| | ||||||    
T  4935244 tacttaaacgaatttcacgtgtacacatcacttatttataactttttaacagtggtacttaataggtactcaa 4935172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 4432479 - 4432342
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccac 233  Q
    ||||||| ||| | ||||||||| ||||||||||| ||||||| ||||| |||||||||  ||| | |   |||||| |||||||||||||| ||  ||     
T  4432479 tgtacacctcatttatttataatattttaatagtaatacttaaaaagaattcaatcccttaaacgcagcatctcacaaaaatttcttaaatgagattcat 4432380  T
Q  234 aaatcaactatcaataactttatatcaatacatatcaa 271  Q
      |||| |||||||||||||||||| | ||||| ||||    
T  4432379 tgatcagctatcaataactttatataattacatttcaa 4432342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 13417180 - 13417287
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||| ||||||||| ||| ||  ||| ||  |||||||||||||||| || ||||||||||  ||||| ||||||||| | |||||| |||||     
T  13417180 taagagcatctacaatggagatcctcacatttgaggtcttaaacgggttccacatggacacatcacttttttattattttttaacaatagtacctaatag 13417279  T
Q  183 gaactcaa 190  Q
    | ||||||    
T  13417280 gtactcaa 13417287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 15468168 - 15468223
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||||||||||||||||||| |||| |||||  ||||||||| |||||||||    
T  15468168 ctcacacaaatttcttaaatgggatccactaatcatttatcaataattttatatca 15468223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 11200547 - 11200497
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataag 183  Q
    |||| ||||||||||||||||||||||||||||||| || ||| |||||||    
T  11200547 cacgcgtacacatcactcatttataattttttaataataatacctaataag 11200497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 2988004 - 2987955
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||| |||||||||||||||||||||||||||||| ||  |||||||||    
T  2988004 cacgtatacacatcactcatttataattttttaataatataacttaataa 2987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 837693 - 837777
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    |||||||| || | |||| |||||| ||||||| ||||||||||||||||| ||||||| || | ||  ||||||| ||||||||    
T  837693 cattttttggttcgtaaatgggttcaacgtgtatacatcactcatttataaatttttaacagcaatatctaataagcactcaatc 837777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 266
Target Start/End: Complemental strand, 8228969 - 8228783
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||||| |||||||    | ||||||| |||||||||||  |  ||| |||||| | || |||||||||||||||||| | |||||  ||||||    
T  8228969 taagagcatccataatggagacatctattttttggtacttaaacgaatctcacatgtacaaaccaatcatttataattttttaacaatagtatctaataa 8228870  T
Q  183 gaactcaatccctctaaca---ctgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
      |||||||||||| ||||   |  |||| ||| |||| | ||||  || |||| |||||||||||||||| | ||||||| |||||    
T  8228869 atactcaatccctccaacacatcatctcatacagatttttaaaataagatccacgaatcaactatcaataattgtatatcattacat 8228783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 6761363 - 6761406
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||    
T  6761363 tacacatcacttatttataattttttaataatagtatttaataa 6761406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 260
Target Start/End: Complemental strand, 13486658 - 13486607
Alignment:
Q  209 cacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||| || |||||||| |||||| ||||| ||||||||||||||||||||    
T  13486658 cacaaagtttttaaatggaacccactaatcagctatcaataactttatatca 13486607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 14643425 - 14643343
Alignment:
Q  86 gagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaata 168  Q
    |||||||||||||| ||  || || |||| |||| |||||||| || ||||||||| | |||||||||| ||||||| |||||    
T  14643425 gagcatccacaatgaagaccctcaattttaagtaattaaacggatttcacgtgtacgcgtcactcatttttaattttataata 14643343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 13914681 - 13914726
Alignment:
Q  151 atttataattttttaatagtagtacttaataagaactcaatccctc 196  Q
    |||||||||||| ||||||||||  ||||||||||||||| |||||    
T  13914681 atttataattttgtaatagtagtgtttaataagaactcaaaccctc 13914726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 28998043 - 28998104
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||| ||||||||||||||   ||||||| ||||| |||| ||||||||||||||| |||||    
T  28998043 ctcatacaaatttcttaaacaagacccactaatcatctataaataactttatatcattacat 28998104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 8516866 - 8516925
Alignment:
Q  131 tccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaat 191  Q
    |||||||| |||||||| | ||||||||||||||||||  |||||||| |||| |||||||    
T  8516866 tccacgtg-acacatcatttatttataattttttaataaaagtacttattaaggactcaat 8516925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 20420217 - 20420181
Alignment:
Q  235 aatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||||||||||||||| || |||||||    
T  20420217 aatcaactatcaataactttatatcattatatatcaa 20420181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 26149030 - 26148970
Alignment:
Q  121 ttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaata 181  Q
    ||||||||| ||||| || ||||||||||  ||||| ||||||||||| |||||| |||||    
T  26149030 ttaaacgggctccacatggacacatcacttttttattattttttaataatagtacgtaata 26148970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 2e-42; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 87 - 271
Target Start/End: Original strand, 32977297 - 32977484
Alignment:
Q  87 agcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataatttttt-aatagtagtacttaataagaa 185  Q
    |||||| |||||||||   |||||||||  ||||||||| |||| ||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||| |    
T  32977297 agcatctacaatggagacacccatttttgggtacttaaatgggtcccacgcgtacacatcactcatttatgatttttttaatagtagtacctaataagca 32977396  T
Q  186 ctcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||||||||||| ||| | |  |||||||||| |||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||    
T  32977397 ctcaatccctccaacccagatctcacacaaagttcttaaatgggacccactaatcaactatcaataactttataccactacatttcaa 32977484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 83 - 271
Target Start/End: Original strand, 7693843 - 7694035
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttc-cacgtgtacacatcactcatttataattttttaatagtagtacttaata 181  Q
    |||||| |||||||||||||   | |||||| || ||||||||  || || ||||| ||||||||||||||||||||||||||| || |||||| |||||    
T  7693843 taagagtatccacaatggagacactcattttctaatacttaaattgggtctcacgtatacacatcactcatttataattttttagtaatagtacctaata 7693942  T
Q  182 agaactcaatccctctaacac---tgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    || |||||||||||| ||| |     ||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||| ||||    
T  7693943 agtactcaatccctccaacccataatctcacacaaattttttaaatggaacccactaatcaactatcaataacttcatatcaatacatttcaa 7694035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 83 - 260
Target Start/End: Original strand, 32658347 - 32658526
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||||||| |||||   | |||||||  || |||||| ||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  32658347 taagagcatccacagtggagacactcatttttaggttcttaaatgggtctcacgtggacacatcactcatttataattttttaatagtagtacctaataa 32658446  T
Q  183 gaactcaatccctctaa--cactgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
      ||| |||| ||| ||  ||   |||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||    
T  32658447 acactaaatcactccaacccatatctcacacaaagttcttaaatggaatccactaatcaactatcaataactttatatca 32658526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 134 - 258
Target Start/End: Original strand, 5002341 - 5002469
Alignment:
Q  134 acgtgtacacatcactcatttataattttttaat--agtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggac 229  Q
    |||||||||||||||| ||||||||||||||  |  |||||||  ||||||| |||||||| ||| |||   |  |||||||||| ||||||||||||||    
T  5002341 acgtgtacacatcacttatttataatttttttttgtagtagtatctaataagcactcaatcactccaaccgagatctcacacaaagttcttaaatgggac 5002440  T
Q  230 ccacaaatcaactatcaataactttatat 258  Q
    |||| ||||||||||||||||||||||||    
T  5002441 ccactaatcaactatcaataactttatat 5002469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 255
Target Start/End: Complemental strand, 33755918 - 33755768
Alignment:
Q  107 ccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacac--tg 204  Q
    ||||| ||| || |||||| ||||  || ||||| |||| ||| |||||| |||||||||||||||||| ||||||| | |||||| ||| |||||        
T  33755918 ccattctttggttcttaaatgggtctcaagtgtatacattacttatttattattttttaatagtagtacctaataagtattcaatcactccaacacaaat 33755819  T
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataacttta 255  Q
    |||||||||| ||||||||||  | |||| |||||||||||||||||||||    
T  33755818 ctcacacaaaattcttaaatgaaatccactaatcaactatcaataacttta 33755768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 22281763 - 22281868
Alignment:
Q  157 aattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataacttt 254  Q
    ||||||||||||||||||| ||||||| |||||||| ||| |||  ||  ||| |||||| |||||||||||||  ||| ||||||| ||||||||||||    
T  22281763 aattttttaatagtagtacctaataagcactcaatcactccaaccttgatctcccacaaagttcttaaatgggattcactaatcaaccatcaataacttt 22281862  T
Q  255 atatca 260  Q
    ||||||    
T  22281863 atatca 22281868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 31743534 - 31743670
Alignment:
Q  135 cgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggaccc 231  Q
    |||||| |||| | ||||||||||| ||||||||||||||  |||||||||||||||||||  |||   ||  || |||||||||| ||||||| ||  |    
T  31743534 cgtgtatacataattcatttataatattttaatagtagtatctaataagaactcaatcccttcaaccgaacatcttacacaaatttattaaatgagatac 31743633  T
Q  232 acaaatcaactatcaataactttatatcaatacatat 268  Q
    |  |||||||||| ||||||||||||||| |||||||    
T  31743634 attaatcaactattaataactttatatcattacatat 31743670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 387879 - 387750
Alignment:
Q  132 ccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccct-----ctaacactgctcacacaaatttcttaaatgg 226  Q
    |||| ||||||||| ||||||||||||||||||||||||||||  | ||| | ||||||| | |     | |||| |  |||||||||||||||||||      
T  387879 ccacatgtacacataactcatttataattttttaatagtagtatctgataggcactcaattcattcaatccaacatt--tcacacaaatttcttaaataa 387782  T
Q  227 gacccacaaatcaactatcaataactttatat 258  Q
    ||||||| ||||||||||||||||||||||||    
T  387781 gacccactaatcaactatcaataactttatat 387750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 3705666 - 3705751
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatcc 193  Q
    ||||||| | ||||||||  | || |||| |||||||||||| ||||  ||||||||||||||||||| ||||||| | |||||||    
T  3705666 catttttaaatacttaaatagatttcacgcgtacacatcacttatttggaattttttaatagtagtacctaataagtattcaatcc 3705751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 9491657 - 9491706
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataacttt 254  Q
    |||||||||||||| ||||||||||  || ||||||||||||||||||||    
T  9491657 ctcacacaaatttcataaatgggacatactaatcaactatcaataacttt 9491706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 24848518 - 24848461
Alignment:
Q  135 cgtgtacacatcactcatttataatt-ttttaatagtagtacttaataagaactcaat 191  Q
    ||||||||||||| |||||||||||| ||||||||||  ||||||||||| |||||||    
T  24848518 cgtgtacacatcattcatttataatttttttaatagtgatacttaataaggactcaat 24848461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 3543352 - 3543289
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctc 196  Q
    ||||||||||||| |||||||||||| |||||||||||| ||  ||| ||| ||| ||||||||    
T  3543352 cacgtgtacacattactcatttataaatttttaatagtattatctaacaagtacttaatccctc 3543289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 21940977 - 21941028
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttat 256  Q
    ||||||||||  ||||||||||| ||||| ||| ||||||||||||||||||    
T  21940977 ctcacacaaaagtcttaaatgggtcccactaataaactatcaataactttat 21941028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 18804222 - 18804288
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||| ||||||| ||  || |||||||||||||||| ||||||| | ||||| ||||    
T  18804222 ctcacacaaatttcataaatggaacttactaatcaactatcaataattttatattattacatttcaa 18804288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 85 - 266
Target Start/End: Complemental strand, 26312671 - 26312488
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    |||| ||||||||||||| | ||| |||||  ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  26312671 agagtatccacaatggagatacccctttttgggtacttaaacgggtcacacgtgtacacatcactcatttataattttttaatagtagtacctaataagc 26312572  T
Q  185 actcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    ||||||| |||| ||| | |  ||||||||||||| |||||| | |||||| ||||||||| |||||||||||| ||| |||||    
T  26312571 actcaattcctccaactcagatctcacacaaatttattaaatagaacccactaatcaactaccaataactttatgtcattacat 26312488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 83 - 260
Target Start/End: Complemental strand, 11922146 - 11921967
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||||||||||||||||||   | ||||||| | |||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||| ||| ||    
T  11922146 taagagcatccacaatggagacactcatttttaattacttaaatgggtctcacgtgtacacattactcatttataattttttaatagtagtacctaaaaa 11922047  T
Q  183 gaactcaatccctctaa--cactgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    | ||||||| |||| ||  ||   |||||||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  11922046 gcactcaattcctccaacccaaatctcacacaaatttcttaaatgggacctactaatcaactaccaataactttatatca 11921967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 83 - 257
Target Start/End: Original strand, 14772847 - 14773023
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||| |||||||||   ||||||||| ||| |||||| ||||  |||| |||||||||| |||||||||||||||||| | |||||| ||||||    
T  14772847 taagagcatctacaatggagacacccatttttgagttcttaaatgggtctcacgcgtacacatcattcatttataattttttaacaatagtacctaataa 14772946  T
Q  183 gaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttata 257  Q
    | ||||||| |||| ||||| |  |||||||||| |||||||||||||| ||  |||||||||||||||||||||||    
T  14772947 gtactcaattcctccaacacagatctcacacaaagttcttaaatgggactcattaatcaactatcaataactttata 14773023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 85 - 260
Target Start/End: Original strand, 16117835 - 16118013
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    |||||||||||| |||||  ||||||||||||||| ||||| ||||  |||||||||| |||||||||||||||||||||||||  | ||| |||||||     
T  16117835 agagcatccacattggagacccccattttttagtatttaaatgggtctcacgtgtacatatcactcatttataattttttaatatcaatacctaataagc 16117934  T
Q  185 actcaatccctctaacactg---ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||| |||| |||  ||   |||||||| ||| | ||||||| | |||||||||||||||||||||||||||||||    
T  16117935 actcaattcctccaaccatgcatctcacacatattccataaatggtatccacaaatcaactatcaataactttatatca 16118013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 15269399 - 15269280
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||||||||||||| | |||||||||  ||||||||| ||||  ||| ||||||||| ||||||||||||||||||||||||||| | ||||||    
T  15269399 taagagcatccacaatggagatacccatttttcggtacttaaatgggtctcacatgtacacattactcatttataattttttaatagtagtgcctaataa 15269300  T
Q  183 gaactcaatccctctaacac 202  Q
    | | |||||||||| |||||    
T  15269299 gtattcaatccctccaacac 15269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 34375196 - 34375061
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacact--gctcacacaaatttcttaaatgggacccaca 234  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||  | || || |||  ||||||||||||||||      
T  34375196 tgtacacatcacttatttataattttttaatagtagtacctaataagaattcaatccctccaac-ctaagatctcaaaaaaatcttaaatgggacccatt 34375098  T
Q  235 aatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||||||||||||| | ||||| ||||    
T  34375097 aatcaactatcaataactttatattattacatttcaa 34375061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 9583294 - 9583165
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||  ||||||| |||||||| ||| ||| | |  |||||||||| ||||||||| |||||    
T  9583294 cacgtgtacgcatcacttatttataattttttaatagtagtatctaataagcactcaatcactcaaactcagatctcacacaaagttcttaaattggacc 9583195  T
Q  231 cacaaatcaactatcaataactttatatca 260  Q
    ||| |||||| | |||||||||||| ||||    
T  9583194 cactaatcaattgtcaataactttacatca 9583165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 6710843 - 6710978
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac--actgctcacacaaatttcttaaatgggacc 230  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||| || ||| |||  |   |||||||||| ||||||||| | | |    
T  6710843 cacgtgtacagatcactcatttataattttttaatagtagtatctaataagcactcagtcactccaacctagatctcacacaaagttcttaaatagaatc 6710942  T
Q  231 cacaaatcaactatcaataactttatatcaatacat 266  Q
     |  |||||||||||||||||||||||||| |||||    
T  6710943 aattaatcaactatcaataactttatatcattacat 6710978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 133 - 268
Target Start/End: Original strand, 37347808 - 37347949
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg------ctcacacaaatttcttaaatgg 226  Q
    ||||||||||||||| | ||||||||||||||||||||| ||  ||||||||| |||||||||| ||| | |      |||||||||| |||||||||      
T  37347808 cacgtgtacacatcatttatttataattttttaatagtaatatctaataagaattcaatccctccaacccagcatcatctcacacaaagttcttaaatat 37347907  T
Q  227 gacccacaaatcaactatcaataactttatatcaatacatat 268  Q
    |||| ||||||||| | |||||||||||||| || |||||||    
T  37347908 gacctacaaatcaagtgtcaataactttataccattacatat 37347949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 41068743 - 41068891
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtactt-aataagaactcaatccctctaacactgct 206  Q
    |||||||  ||| ||||| |||| | ||||||| |||||| ||||||||||||||| ||||||||||||| |||||| ||||||||  |||    || ||    
T  41068743 catttttgggtatttaaatgggtccaacgtgtatacatcattcatttataatttttaaatagtagtacttaaataagcactcaatcattct----ct-ct 41068837  T
Q  207 cacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||| || ||||||| ||||   |||||||||||||||||||||||||||    
T  41068838 cacacaaaatttttaaatgagaccactaaatcaactatcaataactttatatca 41068891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 83 - 260
Target Start/End: Original strand, 36887490 - 36887670
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||| |||||||||    ||||||||  ||| ||||| || | || ||||||||||||||| |||||||| ||||||||| |||||  ||||||    
T  36887490 taagagcatctacaatggagacatccatttttgggtatttaaatggatgccgcgtgtacacatcacttatttataaatttttaataatagtatctaataa 36887589  T
Q  183 gaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
     |||||| |||||  | | | |   |||||| ||| |||||||||| || |||| |||||||||||||||| |||||||||    
T  36887590 taactcagtcccttcagcgcagagtctcacaaaaaattcttaaatgagatccactaatcaactatcaataaatttatatca 36887670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 9733802 - 9733674
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc-tcacacaa-atttcttaaatgggacc 230  Q
    ||||||||||||||||| |||||||| | ||||||| |||||  ||||||||||||||| |||| ||| | || || ||||| | ||||||||||||||     
T  9733802 cacgtgtacacatcacttatttataactctttaataatagtatctaataagaactcaattcctccaactcagcatctcacaacaattcttaaatgggact 9733703  T
Q  231 cacaaatcaactatcaataactttatatc 259  Q
     || ||||||||| |||||| ||||||||    
T  9733702 taccaatcaactagcaataattttatatc 9733674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 3668991 - 3668861
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggac 229  Q
    |||||||| | || ||| |||||||||||||||||||||||| |||||||| ||||||||| || |||   |    |||||||||||||||||||  ||     
T  3668991 cacgtgtatatattactaatttataattttttaatagtagtaattaataagtactcaatccgtccaactcaatatatcacacaaatttcttaaataagaa 3668892  T
Q  230 ccacaaatcaactatcaataactttatatca 260  Q
    |||| ||| ||||||| |||| |||||||||    
T  3668891 ccactaattaactatcgataattttatatca 3668861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 40999753 - 40999701
Alignment:
Q  208 acacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  40999753 acacaaatttcttaaatggaacccactaatcaaccatcaataactttatatca 40999701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 258
Target Start/End: Complemental strand, 5038848 - 5038736
Alignment:
Q  151 atttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaa--atgggacccacaaatcaactatc 245  Q
    |||||||||||||||||| ||||| |||||||| | |||||| ||| ||| | |   ||||||||||||||||||   || ||||||| |||||||||||    
T  5038848 atttataattttttaataatagtaattaataagcattcaatctctccaacccggcatctcacacaaatttcttaattgtgtgacccactaatcaactatc 5038749  T
Q  246 aataactttatat 258  Q
    ||||| |||||||    
T  5038748 aataattttatat 5038736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 31050055 - 31050122
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtac 175  Q
    ||||||| |||||||||| | ||  ||| ||||||||||||| |||||||||||||||||||||||||    
T  31050055 catttttgagtacttaaatgagtctcacatgtacacatcacttatttataattttttaatagtagtac 31050122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 36267135 - 36267096
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtag 172  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36267135 cacgtgtacacatcactcatttataattttttaatagtag 36267096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 14332011 - 14332097
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatag 169  Q
    ||||||||| ||||| |||| | | |||||||| | ||||||| || |  |||||||||||||||||||||||||||||||| ||||    
T  14332011 taagagcatacacaacggagatactcattttttggaacttaaatggatctcacgtgtacacatcactcatttataattttttgatag 14332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 271
Target Start/End: Original strand, 65383 - 65505
Alignment:
Q  152 tttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaat 248  Q
    |||||||||||||||| ||||||| ||||||  ||| |||||||| ||    ||  ||||||||||||| ||||||| || |||  ||||||||||||||    
T  65383 tttataattttttaattgtagtacataataaacacttaatccctccaatccaacatctcacacaaatttattaaatgagaaccattaatcaactatcaat 65482  T
Q  249 aactttatatcaatacatatcaa 271  Q
    || ||| ||||| ||||| ||||    
T  65483 aagtttgtatcattacatttcaa 65505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 21848168 - 21848227
Alignment:
Q  132 ccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaat 191  Q
    |||||||||||||||||| ||||||||||||||||||  | |||||| |||| |||||||    
T  21848168 ccacgtgtacacatcacttatttataattttttaataaaaatacttattaaggactcaat 21848227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 36267052 - 36267001
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttat 256  Q
    ||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||    
T  36267052 ctcacacgaatttcttaaatgagacccactaatcagctatcaataactttat 36267001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 44677729 - 44677670
Alignment:
Q  112 ttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagta 171  Q
    |||||||| |||||||| |  |||||||||||||| || |||||||||||||||||||||    
T  44677729 ttttagtatttaaacggatatcacgtgtacacatctcttatttataattttttaatagta 44677670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 7868228 - 7868393
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--- 204  Q
    |||||||||| ||||||| |  || ||| |||||| ||||||||||||||||||||||| | ||||| | |||| | ||||||| |||| ||  | |       
T  7868228 cattttttagcacttaaatgaatttcacatgtacagatcactcatttataattttttaacaatagtaatcaataggtactcaatgcctccaattcagcat 7868327  T
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataac-tttatatcaatacatatcaa 271  Q
    ||||| ||||||  |||||| | |||||| |||||| |||||||||| ||||||||| ||||| ||||    
T  7868328 ctcacgcaaatt--ttaaatagaacccaccaatcaattatcaataacttttatatcattacatttcaa 7868393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 34234962 - 34234896
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||| |||||||| ||||||  ||||||| |||||| ||||||||||||||||||| ||||| ||||    
T  34234962 ctcatacaaatttattaaattagacccactaatcaattatcaataactttatatcattacatttcaa 34234896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 260
Target Start/End: Complemental strand, 45135819 - 45135785
Alignment:
Q  226 ggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||||||||||||||||||||||||||||||    
T  45135819 ggacccacaaatcaactatcaataactttatatca 45135785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 4279879 - 4279928
Alignment:
Q  222 aatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||||||| |||||||||||||||||||||||||||| ||  |||||||||    
T  4279879 aatgggatccacaaatcaactatcaataactttataccatcacatatcaa 4279928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 18970074 - 18970021
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatat 258  Q
    |||||||||||||||||||||  || ||| |||||||||| |||||||||||||    
T  18970074 ctcacacaaatttcttaaatgaaactcactaatcaactattaataactttatat 18970021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 28857283 - 28857179
Alignment:
Q  81 tataagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaat 180  Q
    |||||||||| ||| ||| ||| | | |||||||| ||||||||| ||||   || | ||||||| | | ||||||||||||||| ||||| ||||||||    
T  28857283 tataagagcaaccaaaatagagatactcattttttggtacttaaatgggtcttacttatacacataatttatttataattttttagtagtaatacttaat 28857184  T
Q  181 aagaa 185  Q
    |||||    
T  28857183 aagaa 28857179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 30465396 - 30465352
Alignment:
Q  151 atttataattttttaatagtagtacttaataagaactcaatccct 195  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||    
T  30465396 atttataattttttaatagtagtatctaataagaattcaatccct 30465352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 2968803 - 2968854
Alignment:
Q  140 acacatcactcatttataattttttaatagtagtacttaataagaactcaat 191  Q
    |||||||||| ||||||||| ||||||||  |||||||| ||||||||||||    
T  2968803 acacatcacttatttataatattttaataaaagtacttattaagaactcaat 2968854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 4634105 - 4634050
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    ||||||||||| |  | ||||||||||||||| |||||| ||||||||||||||||    
T  4634105 tgtacacatcatttttgtataattttttaataatagtacctaataagaactcaatc 4634050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 16342000 - 16341961
Alignment:
Q  220 taaatgggacccacaaatcaactatcaataactttatatc 259  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  16342000 taaatggtatccacaaatcaactatcaataactttatatc 16341961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 183
Target Start/End: Original strand, 17603948 - 17603978
Alignment:
Q  153 ttataattttttaatagtagtacttaataag 183  Q
    |||||||||||||||||||||||||||||||    
T  17603948 ttataattttttaatagtagtacttaataag 17603978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 23394249 - 23394299
Alignment:
Q  118 tacttaaacgggttccacgtgtacacatcactcatttataattttttaata 168  Q
    |||||||| |||||  |||||||||||||| || |||||||||||||||||    
T  23394249 tacttaaatgggttatacgtgtacacatcattcttttataattttttaata 23394299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 26297192 - 26297138
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||| ||| ||||||||||||| ||   ||||||||||||||||||||||||||    
T  26297192 tcacataaagttcttaaatgggatccgataatcaactatcaataactttatatca 26297138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 167
Target Start/End: Complemental strand, 39446469 - 39446435
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaat 167  Q
    ||||||||||||||||| |||||||||||||||||    
T  39446469 cacgtgtacacatcacttatttataattttttaat 39446435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 8798679 - 8798732
Alignment:
Q  143 catcactcatttataattttttaatagtagtacttaataagaactcaatccctc 196  Q
    |||||||||||||||||||||||||| || ||  ||||||| | ||||||||||    
T  8798679 catcactcatttataattttttaataataatatctaataagcagtcaatccctc 8798732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 11511843 - 11511948
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    ||||||||||||||||||   | ||| ||| ||  ||||||||||| |||| || ||||||||||  || || ||||||||||| |||||| ||||| |     
T  11511843 agagcatccacaatggagacactcatatttgaggtcttaaacgggtcccacatggacacatcactttttaattattttttaataatagtacctaataggt 11511942  T
Q  185 actcaa 190  Q
    ||||||    
T  11511943 actcaa 11511948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 32887549 - 32887634
Alignment:
Q  107 ccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    ||||||||| |||||||||  | ||  ||||||| ||| || |||||||||||||||||||||| || | ||||||| | ||||||    
T  32887549 ccatttttttgtacttaaatagattttacgtgtatacaacattcatttataattttttaatagtggtgcctaataagcattcaatc 32887634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 37074885 - 37074773
Alignment:
Q  138 gtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc-tcacacaaatttcttaaatgggacccacaaa 236  Q
    |||||||||| ||||||||||||| |||| ||| | || ||||||  ||||||||| | |||| | || |||||| ||||| ||||||| ||| ||  ||    
T  37074885 gtacacatcaatcatttataatttgttaagagtggcacctaataaatactcaatccttttaactcagcatcacac-aattttttaaatgagactcattaa 37074787  T
Q  237 tcaactatcaataa 250  Q
    ||||||||||||||    
T  37074786 tcaactatcaataa 37074773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 10864495 - 10864523
Alignment:
Q  136 gtgtacacatcactcatttataatttttt 164  Q
    |||||||||||||||||||||||||||||    
T  10864495 gtgtacacatcactcatttataatttttt 10864523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 21455060 - 21455092
Alignment:
Q  136 gtgtacacatcactcatttataattttttaata 168  Q
    ||||||||||||||| |||||||||||||||||    
T  21455060 gtgtacacatcactcttttataattttttaata 21455092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 22621302 - 22621262
Alignment:
Q  136 gtgtacacatcactcatttataattttttaatagtagtact 176  Q
    ||||||||||  | |||||||||||||||||||||||||||    
T  22621302 gtgtacacatggcacatttataattttttaatagtagtact 22621262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 34820926 - 34820986
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||||||||||||||||| || ||  |  |||||||||||| ||||||||||||| |||||    
T  34820926 tcacacaaatttcttaaacggaacttatcaatcaactatcagtaactttatatcattacat 34820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 6e-42; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 85 - 271
Target Start/End: Original strand, 10180537 - 10180725
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    ||||||| ||||||||||   ||||||||| |||||||||| || |  |||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10180537 agagcattcacaatggagactcccatttttaagtacttaaatggatctcacgtgtacatatcactcatttataattttttaatagtagtacctaataaga 10180636  T
Q  185 actcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||||||| |||| |||    |  || |||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||||||||    
T  10180637 actcaatgcctccaacctagcatcttacacaaatttcttaaatgagatccac-aatcaactatcaataactttatatcattacatatcaa 10180725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 107 - 271
Target Start/End: Complemental strand, 2396477 - 2396310
Alignment:
Q  107 ccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg-- 204  Q
    ||||||||  || |||||| | || |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||| ||| | |      
T  2396477 ccatttttgggttcttaaatgagtcccacgtgtacacatcacttatttataatttgttaatagtagtacctaataagaactcaatcgctcaaactcagca 2396378  T
Q  205 -ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
     |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||    
T  2396377 tctcacaaaaatttcttaaatggaacccactaatcaactatcaataactttatatcagtacatttcaa 2396310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 85 - 260
Target Start/End: Original strand, 35331907 - 35332084
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    |||||||||||||||||| |  ||||||||| ||  ||||| | || |||||| ||||||| ||| ||||||| ||||||||||||||||| |||||||     
T  35331907 agagcatccacaatggagatatccattttttggttgttaaatgagtcccacgtatacacattacttatttatacttttttaatagtagtacataataagc 35332006  T
Q  185 actcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||| ||| ||| | |  |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  35332007 actcaatcactccaacccagatctcacacaaagttcttaaatgggatccactaatcaactatcaataactttatatca 35332084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 53096599 - 53096722
Alignment:
Q  153 ttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaata 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||   ||  |||||||||||||||||||||||||| || |||||||||||||||    
T  53096599 ttataattttttaatagtaatacttaataagaactcaatccctttaacccaacatctcacacaaatttcttaaatgggaccaactaatcaactatcaata 53096698  T
Q  250 actttatatcaatacatatcaaat 273  Q
    ||||||||| | ||||||||||||    
T  53096699 actttatattattacatatcaaat 53096722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 93 - 266
Target Start/End: Complemental strand, 39055354 - 39055179
Alignment:
Q  93 cacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    ||||||||||   |||||||||  || |||||| ||||  |||| ||||||||||||||||||||||||||||||| |||||| ||||||| | | ||||    
T  39055354 cacaatggagacacccatttttaggttcttaaatgggtctcacgcgtacacatcactcatttataattttttaatattagtacctaataagtattaaatc 39055255  T
Q  193 cctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||| ||| | |  |||||||||| ||||||||||  |||||| |||||||||||||||||||||||||| |||||    
T  39055254 cctccaactcagatctcacacaaagttcttaaatgaaacccactaatcaactatcaataactttatatcattacat 39055179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 88 - 260
Target Start/End: Complemental strand, 52200000 - 52199826
Alignment:
Q  88 gcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaact 187  Q
    |||||||||| ||||   |||||||||  || |||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||| ||||||| | |    
T  52200000 gcatccacaacggagacacccatttttgggttcttaaatgggtcccacgtgcacacgtcactcatttataattttttaatagtagtacctaataagcatt 52199901  T
Q  188 caatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||| ||| ||| | |  |||||||||| |||||||||||||||||| |||| ||||||||||| | |||||||    
T  52199900 caatcactccaacccagatctcacacaaagttcttaaatgggacccactaatccactatcaataattatatatca 52199826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 121 - 271
Target Start/End: Original strand, 822339 - 822491
Alignment:
Q  121 ttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttc 218  Q
    ||||| ||||||||| ||||||||||| | ||||||| ||||||||||||||||  ||||||| |||||||||||| ||| | |  |||||||||| |||    
T  822339 ttaaatgggttccacatgtacacatcatttatttatagttttttaatagtagtatctaataagtactcaatccctccaacccagatctcacacaaagttc 822438  T
Q  219 ttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||||||| ||| ||  ||||||||||||||||| |||||||| ||||| ||||    
T  822439 ttaaatgagacacattaatcaactatcaataacattatatcactacatttcaa 822491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 133 - 271
Target Start/End: Complemental strand, 12447571 - 12447430
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatgggac 229  Q
    |||| ||||| |||||| |||||||||||||||||||||||   ||||||||||||||||| | |||| | |   |||||| |||||||||||||  |||    
T  12447571 cacgagtacaaatcacttatttataattttttaatagtagtctataataagaactcaatccttttaacccagcatctcacaaaaatttcttaaataagac 12447472  T
Q  230 ccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  12447471 ccactaatcaactatcaataactttatatcattacatttcaa 12447430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 23359248 - 23359127
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaa 236  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||| |||||||| ||| |||   |  |||||||||| |||||||||| || |||||||    
T  23359248 tacacatcattcatttataattttttaatagtagtatctaataagcactcaatcactccaacctagatctcacacaaagttcttaaatgagatccacaaa 23359149  T
Q  237 tcaactatcaataactttatat 258  Q
    ||||||||||||||||||||||    
T  23359148 tcaactatcaataactttatat 23359127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 35308931 - 35309086
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc-- 205  Q
    ||||||| | |||||||| | ||  |||| |||||| ||||| ||||||||||||||||||||| ||  ||||||| |||||||||||||| |   ||      
T  35308931 catttttgaatacttaaatgagtctcacgcgtacacgtcacttatttataattttttaatagtaatatctaataagtactcaatccctctagcctagcaa 35309030  T
Q  206 -tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
     |||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||    
T  35309031 ctcacacaatttttttaaatgggactcactaatcaactatcaataactttatatca 35309086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 135 - 260
Target Start/End: Original strand, 35382337 - 35382464
Alignment:
Q  135 cgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggaccca 232  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |||||| ||| ||| | |   ||||||||| |||||||||| ||| ||    
T  35382337 cgtgtacacctcattcatttataattttttaatagtagtacataataagcattcaatcactccaacccagatttcacacaaagttcttaaatgagacaca 35382436  T
Q  233 caaatcaactatcaataactttatatca 260  Q
    | |||||||||||| |||||||||||||    
T  35382437 ctaatcaactatcactaactttatatca 35382464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 45834000 - 45833894
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacc 230  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||| ||| | |  |||||||||| |||||||||||||||    
T  45834000 cacgtgtacacatcactcatttataattttttaatagtaata-ttaataagcactcaatcactccaacccagatctcacacaaagttcttaaatgggacc 45833902  T
Q  231 cacaaatc 238  Q
    ||| ||||    
T  45833901 cactaatc 45833894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 266
Target Start/End: Complemental strand, 49211206 - 49211044
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataatt-ttttaatagtagtacttaataagaactcaatccctctaac---act 203  Q
    ||||||| ||||||||||  |||| |||||||||| |||| | |||||||||| ||||||||||||||  |||||||||||| ||||||| |||    |     
T  49211206 catttttgagtacttaaataggtttcacgtgtacatatcatttatttataatttttttaatagtagtatctaataagaactctatccctccaacctagca 49211107  T
Q  204 gctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
     |||||| ||||| |||||||| ||||||  |||||| ||||||||||||||||||| |||||    
T  49211106 tctcacaaaaattccttaaatgagacccattaatcaattatcaataactttatatcattacat 49211044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 85 - 260
Target Start/End: Complemental strand, 26699207 - 26699029
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    ||||||||||||||||||    ||||||||  ||||||||| || | |||| ||||||||||||||  |||||| |||||||||||| ||  ||||||||    
T  26699207 agagcatccacaatggagacatccatttttgggtacttaaatggatcccacatgtacacatcactcgcttataaatttttaatagtaatatctaataaga 26699108  T
Q  185 actcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||  |  || |  ||   |||||||||||||||||||| ||| ||| ||||||| || |||||||||||||||    
T  26699107 actcaatcatttcaatatagcatttcacacaaatttcttaaatgagacacactaatcaacgattaataactttatatca 26699029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 144 - 266
Target Start/End: Complemental strand, 22628610 - 22628485
Alignment:
Q  144 atcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccacaaatcaa 240  Q
    ||||||| |||||||||||||||||| ||||| ||||||  |||||||| |||| || |     | ||||||||||| ||||||||||| ||| ||||||    
T  22628610 atcactcgtttataattttttaataggagtacataataaacactcaatctctctgacccaatatcacacacaaattttttaaatgggactcactaatcaa 22628511  T
Q  241 ctatcaataactttatatcaatacat 266  Q
    |||||||||||||||||||| |||||    
T  22628510 ctatcaataactttatatcattacat 22628485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 39629171 - 39629294
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaa 236  Q
    ||||||||| | ||||||||||||||||||||||||  ||||||| ||| |||| ||| ||| | |  | |||||||| |||||||||| || |||| ||    
T  39629171 tacacatcatttatttataattttttaatagtagtatctaataagcactaaatcactccaacccagatcacacacaaagttcttaaatgagatccactaa 39629270  T
Q  237 tcaactatcaataactttatatca 260  Q
     ||||||||||||| |||||||||    
T  39629271 acaactatcaataattttatatca 39629294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 30866024 - 30865903
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgctcacacaaatttcttaaatgggacccacaaa 236  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||| ||           |||| |  ||||| |||||||||||||| ||| ||| ||    
T  30866024 tgtatacatcactcacttataattttttaatagtagtacctaataagtac-----------aacatt--tcacataaatttcttaaatgagactcactaa 30865938  T
Q  237 tcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||||||||||||| ||||| ||||    
T  30865937 tcaactatcaataactttatatcattacatttcaa 30865903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 38864966 - 38865077
Alignment:
Q  147 actcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactat 244  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||| ||| ||| | |  |||||||||| ||||||   |||| |||| ||||||||||    
T  38864966 actcatttataattttttaatagtagtacttaaaaagcacttaatcactccaacccagatctcacacaaagttctta---gggatccaccaatcaactat 38865062  T
Q  245 caataactttatatc 259  Q
    ||| || ||||||||    
T  38865063 caacaattttatatc 38865077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 35144590 - 35144447
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||||||| |||||||||    || ||||||| ||| ||||| ||||  |||||||||| |||| | ||||||||||||||| ||||||||  ||||||    
T  35144590 taagagcattcacaatggatacacctattttttggtatttaaatgggtctcacgtgtacatatcaattatttataattttttagtagtagtatctaataa 35144491  T
Q  183 gaactcaatccctctaacactg--ctcacacaaatttcttaaat 224  Q
    | | |||||||||| ||| | |  |||| |||||||||||||||    
T  35144490 gcattcaatccctccaacccagatctcatacaaatttcttaaat 35144447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 271
Target Start/End: Complemental strand, 51655283 - 51655139
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaact---caatccctctaacactgc---tcacacaaatttcttaaatgg 226  Q
    |||||||| |||||||||||||||||| |||||| |||||||  ||||||||| |   |||||| |  ||| | ||   | |||||||||| |||||||     
T  51655283 cacgtgtaaacatcactcatttataatattttaacagtagtatctaataagaattgatcaatcctttcaacccagcatcttacacaaatttattaaatga 51655184  T
Q  227 gacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||| || |||||||||||||||| ||||||||| |||| |||||    
T  51655183 gaccaactaatcaactatcaataattttatatcattacaaatcaa 51655139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 40918027 - 40918094
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaaa 272  Q
    ||||||||| |||||||||||  |||||  ||||||| |||||||||||||||||||||||| |||||    
T  40918027 ctcacacaactttcttaaatgacacccatcaatcaacaatcaataactttatatcaatacatttcaaa 40918094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 42426862 - 42426925
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctc 196  Q
    ||||||||||| | ||| ||||||||||||||||||||||||  |||||| |||||||||||||    
T  42426862 cacgtgtacacgttacttatttataattttttaatagtagtatctaataaaaactcaatccctc 42426925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 23607506 - 23607440
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaa 199  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||  || ||||||||||||| ||||||    
T  23607506 cacgtatacacattacttatttataattttttaatagtagtatctattaagaactcaatctctctaa 23607440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 240
Target Start/End: Complemental strand, 28897768 - 28897635
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctc---taacactg 204  Q
    |||||||  ||||||||| | ||  |||||||| | ||||||||||||||||||||||| | ||||| |||||||| ||||||| ||||   ||||| |     
T  28897768 catttttgcgtacttaaatgagtctcacgtgtatatatcactcatttataattttttaaaattagtaattaataagcactcaattcctccaataacatt- 28897670  T
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaa 240  Q
     ||||||||| |||||||||| ||| ||| ||||||    
T  28897669 -tcacacaaaattcttaaatgagacacactaatcaa 28897635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 43968854 - 43968804
Alignment:
Q  210 acaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  43968854 acaaaattcttaaataggacccactaatcaactatcaataactttatatca 43968804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 44500645 - 44500584
Alignment:
Q  134 acgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccct 195  Q
    |||||||||  ||||||||||||||| |||||||| ||||| |||||||| ||| |||||||    
T  44500645 acgtgtacatgtcactcatttataatattttaataatagtatttaataagcacttaatccct 44500584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 8825112 - 8824986
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaa--cactgctcacacaaatttcttaaatgggacc 230  Q
    |||||||| ||||||||||||||||||||||   ||||||||  ||||||| | |||||  ||  ||  ||   || ||| ||| ||||||||||| |||    
T  8825112 cacgtgtatacatcactcatttataattttt---tagtagtatctaataagtattcaattacttcaatccatatcttacataaaattcttaaatggaacc 8825016  T
Q  231 cacaaatcaactatcaataactttatatca 260  Q
     || ||||||||||||||||||||||||||    
T  8825015 tactaatcaactatcaataactttatatca 8824986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 11347116 - 11347003
Alignment:
Q  154 tataattttttaatagtagtacttaataagaactcaatccctctaac-------actgctcacacaaatttcttaaatgggacccacaaatcaactatca 246  Q
    |||||||||||||||||||||| ||||||| | |||||||||| |||        |  ||||||||||||||||||||| ||| ||  |||||| ||| |    
T  11347116 tataattttttaatagtagtacctaataagtattcaatccctccaaccaacccagcatctcacacaaatttcttaaatgagacgcattaatcaattatta 11347017  T
Q  247 ataactttatatca 260  Q
    |||| |||||||||    
T  11347016 ataattttatatca 11347003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 2574095 - 2574161
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||| ||||||||||||||| | |  ||| |||||||||| ||||||||||||||| ||||| ||||    
T  2574095 ctcatacaaatttcttaaatagaattcactaatcaactattaataactttatatcattacatttcaa 2574161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 31262461 - 31262529
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactat---caataactttatatcaatacatatcaa 271  Q
    ||||| ||||||||| |||||||||||| ||||||||||   ||||||||||||| || ||||| ||||    
T  31262461 tcacaaaaatttctttaatgggacccactaatcaactatcaacaataactttataccattacatttcaa 31262529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 41327702 - 41327644
Alignment:
Q  106 cccattttttagtacttaaacgggttccacgtgtacacatcactcatttataatttttt 164  Q
    ||||||||||  |||||||| ||||  ||| ||||||||||||| ||||||||||||||    
T  41327702 cccatttttttatacttaaatgggtcacacttgtacacatcactgatttataatttttt 41327644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 3011010 - 3010957
Alignment:
Q  111 tttttagtacttaaacgggttccacgtgtacacatcactcatttataatttttt 164  Q
    |||| ||||||||||| ||| |||||| ||||||| | ||||||||||||||||    
T  3011010 ttttgagtacttaaacaggtaccacgtatacacataattcatttataatttttt 3010957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 6076643 - 6076704
Alignment:
Q  120 cttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaata 181  Q
    ||||||||||| |||| |||||||||||||  ||||| ||||| ||||| |||||| |||||    
T  6076643 cttaaacgggtcccacttgtacacatcacttttttattattttataataatagtacctaata 6076704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 18743269 - 18743314
Alignment:
Q  151 atttataatttt-ttaatagtagtacttaataagaactcaatccct 195  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||    
T  18743269 atttataatttttttaatagtagtacctaataagcactcaatccct 18743314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 28909451 - 28909492
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagta 174  Q
    |||||||| ||||| ||||||||||||||||||| |||||||    
T  28909451 cacgtgtatacatcgctcatttataattttttaacagtagta 28909492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 8489469 - 8489505
Alignment:
Q  134 acgtgtacacatcactcatttataattttttaatagt 170  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  8489469 acgtgtatacatcacttatttataattttttaatagt 8489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 28967352 - 28967384
Alignment:
Q  133 cacgtgtacacatcactcatttataatttttta 165  Q
    ||||||||||||||| |||||||||||||||||    
T  28967352 cacgtgtacacatcattcatttataatttttta 28967384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 37189048 - 37189104
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatcc 193  Q
    ||||||||| ||| |||||||||||||||||| || ||| ||||||  |||||||||    
T  37189048 tgtacacataacttatttataattttttaataataatacataataattactcaatcc 37189104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 4e-37; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 85 - 271
Target Start/End: Original strand, 13628960 - 13629149
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    ||||||||||||||||||  | |||||||| ||| |||||| ||||  ||| ||||||||||| ||||||||||||||||||||||||||  |||||||     
T  13628960 agagcatccacaatggagacctccatttttgagttcttaaatgggtctcacatgtacacatcattcatttataattttttaatagtagtatctaataagt 13629059  T
Q  185 actcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    | |||||||||| |||   ||  |||| ||||| ||||||||| ||| ||| |||||||||||||||||||||||| || ||||||||||    
T  13629060 agtcaatccctccaacccaacatctcatacaaaattcttaaataggatccagaaatcaactatcaataactttataccattacatatcaa 13629149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 85 - 271
Target Start/End: Original strand, 13729372 - 13729561
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    ||||||||||||||||||  | |||||||| ||| |||||| ||||  ||| ||||||||||| ||||||||||||||||||||||||||  |||||||     
T  13729372 agagcatccacaatggagacctccatttttgagttcttaaatgggtctcacatgtacacatcattcatttataattttttaatagtagtatctaataagt 13729471  T
Q  185 actcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    | |||||||||| |||   ||  |||| ||||| ||||||||| ||| ||| |||||||||||||||||||||||| || ||||||||||    
T  13729472 agtcaatccctccaacccaacatctcatacaaaattcttaaataggatccagaaatcaactatcaataactttataccattacatatcaa 13729561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 111 - 271
Target Start/End: Original strand, 6518993 - 6519154
Alignment:
Q  111 tttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc-tcac 209  Q
    ||||| || |||||| |||| ||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||| |||||| ||| ||| | || || |    
T  6518993 ttttttgttcttaaatgggtcccacgtgcacatatcacttatttataattttttaatagtagtacctaataagaattcaatctctccaacccagcatctc 6519092  T
Q  210 acaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||||||| ||||| ||||    
T  6519093 acaaatttcttaaatgagactcactaatcaactatcaataactttatatcattacatttcaa 6519154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 130 - 260
Target Start/End: Original strand, 5535762 - 5535894
Alignment:
Q  130 ttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac--actgctcacacaaatttcttaaatggg 227  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| | ||||| |||||||| ||| |||  |   |||||||||| |||||||| ||     
T  5535762 ttccacgtgtacacatcactcatttataattttttaatattagtaccttataagcactcaatcactccaacctagatctcacacaaagttcttaaacgga 5535861  T
Q  228 acccacaaatcaactatcaataactttatatca 260  Q
    ||||||||||||||| |||||||||||||||||    
T  5535862 acccacaaatcaactttcaataactttatatca 5535894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 260
Target Start/End: Original strand, 31226395 - 31226570
Alignment:
Q  87 agcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaac 186  Q
    |||||||||||||||    |||||||||  || |||||| ||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||  ||    
T  31226395 agcatccacaatggaaacacccatttttgggttcttaaatgggtgtcacatgtacacatcactcatttataattttttaatagtagtacctaataaatac 31226494  T
Q  187 tcaatccctctaac--actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||| | ||| |||  |   |||||||||| |||||||||||||||||| | |||||||||||||| |||||||||    
T  31226495 tcaaacactccaacctagatctcacacaaagttcttaaatgggacccactactcaactatcaataattttatatca 31226570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 111 - 256
Target Start/End: Complemental strand, 35468506 - 35468360
Alignment:
Q  111 tttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctca 208  Q
    |||| ||| |||||| ||||  |||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||  ||||    
T  35468506 ttttgagttcttaaatgggtctcacgcgtacacatcactcatttataattttt-aatagcagtacttaataagtactcaatccctccaacactgatctca 35468408  T
Q  209 cacaaatttcttaaatgggacccacaaatcaactatcaataactttat 256  Q
    | |||| |||||||||| ||| ||| ||| ||||||||||||||||||    
T  35468407 ctcaaagttcttaaatgagactcactaattaactatcaataactttat 35468360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 109 - 260
Target Start/End: Original strand, 1155084 - 1155237
Alignment:
Q  109 attttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ct 206  Q
    ||||||| || |||||| || | || ||||||||||||||||||||||||||||||||||||||||  ||||||| | |||||||||| ||| | |  ||    
T  1155084 attttttggttcttaaatggatcccgcgtgtacacatcactcatttataattttttaatagtagtatctaataagcattcaatccctccaacccagatct 1155183  T
Q  207 cacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||||||||||||| |||  |  ||||||||| ||||||||||||||||    
T  1155184 cacacaaatttcttaaatgagacatattaatcaactaccaataactttatatca 1155237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 121 - 260
Target Start/End: Original strand, 18806528 - 18806669
Alignment:
Q  121 ttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttc 218  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||  | || ||| ||| |||   |  |||||||||||||     
T  18806528 ttaaatgggtttcacgtgtacacatcacttatttataattttttaatagtagtatctaataaacattcgatcactcaaacctagatctcacacaaatttt 18806627  T
Q  219 ttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||||| |||| ||||||||||||||||||||||||||    
T  18806628 ttaaatgggatccactaatcaactatcaataactttatatca 18806669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 37673728 - 37673868
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataag-----aactcaatccctctaa--cactgctcacacaaatttcttaaatg 225  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||     |||| |||||||| ||  ||   |||||||||| |||||||||     
T  37673728 cacgcgtacacatcactcatttataattttttaatagtagtacctaataagtacttaacttaatccctccaatccagatctcacacaaagttcttaaatt 37673827  T
Q  226 ggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||||||| |||||||||||||||| ||||||||| |||||    
T  37673828 ggacccactaatcaactatcaataattttatatcactacat 37673868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 9604473 - 9604603
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggac 229  Q
    ||||| ||| ||||||| |||||||||||||||||| |||||  ||||||||||||||||| || ||| | ||   ||| | ||||||||||||||| ||    
T  9604473 cacgtctacgcatcactaatttataattttttaataatagtatctaataagaactcaatccatccaacccagcatctcataaaaatttcttaaatggaac 9604572  T
Q  230 ccacaaatcaactatcaataactttatatca 260  Q
    |||| ||||||||||||||||||||||||||    
T  9604573 ccactaatcaactatcaataactttatatca 9604603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 31128534 - 31128657
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac--actgctcacacaaatttcttaaatgggacccacaaa 236  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||  |   ||| |||||| |||||||||| |||| || ||    
T  31128534 tacacatcactcatttataattttttaatagtagtacctaataagcattcaatcactctaacctaaatctctcacaaagttcttaaatgagacctactaa 31128633  T
Q  237 tcaactatcaataactttatatca 260  Q
    | ||||||||||||||||||||||    
T  31128634 taaactatcaataactttatatca 31128657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 2603062 - 2603184
Alignment:
Q  151 atttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaat 248  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| ||  | |  |||||||||| |||||||||| || |||| ||||||||||||||    
T  2603062 atttataattttttaatagtagtatctaataagtactcaatccctccaatccagatctcacacaaagttcttaaatgagatccactaatcaactatcaat 2603161  T
Q  249 aactttatatcaatacatatcaa 271  Q
    |||||||||||| ||||| ||||    
T  2603162 aactttatatcactacatttcaa 2603184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 11777634 - 11777779
Alignment:
Q  128 ggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaa--cactgctcacacaaatttcttaaatg 225  Q
    ||||| ||||||||| |||| ||||||||||||| ||||||||||||| ||| ||| | |||||||||  ||  ||    ||||||||||||||||||||    
T  11777634 ggttcaacgtgtacaaatcattcatttataatttcttaatagtagtacctaacaagcattcaatccctgcaatccatatatcacacaaatttcttaaatg 11777733  T
Q  226 ggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
     |||| || |||||||||||||||||||||||||| ||||| ||||    
T  11777734 agacctactaatcaactatcaataactttatatcattacatttcaa 11777779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 136 - 260
Target Start/End: Complemental strand, 38937942 - 38937815
Alignment:
Q  136 gtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggaccca 232  Q
    ||||||| |||||| ||||||||||||||||||||   || |||||||||||||||||||| |||||  |   ||||||||| || |||||| ||| |||    
T  38937942 gtgtacatatcacttatttataattttttaatagtgacacctaataagaactcaatccctccaacacaacatctcacacaaagtttttaaataggatcca 38937843  T
Q  233 caaatcaactatcaataactttatatca 260  Q
    ||||||||||||||| ||||||||||||    
T  38937842 caaatcaactatcaacaactttatatca 38937815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 110 - 260
Target Start/End: Original strand, 14426069 - 14426221
Alignment:
Q  110 ttttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctc 207  Q
    ||||||||| |||||| ||||  |||||||||||||||||  |||||||||||||||| | | ||| ||||||  |||||||| ||| ||| | |  |||    
T  14426069 ttttttagttcttaaatgggtcacacgtgtacacatcacttctttataattttttaattgcaatacctaataaacactcaatcactccaactcagatctc 14426168  T
Q  208 acacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||| |||||||||||||| ||| | |||| ||||||||| |||||||||    
T  14426169 acacaaagttcttaaatgggactcactactcaattatcaataattttatatca 14426221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 28540817 - 28540683
Alignment:
Q  140 acacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccacaaa 236  Q
    ||||||| || ||||||||||||||||||||||||||||||||| | |||||  ||| ||| | |   ||||||||||||||||||| | ||| ||| ||    
T  28540817 acacatccctaatttataattttttaatagtagtacttaataagtattcaattactccaacccagcatctcacacaaatttcttaaaagagactcactaa 28540718  T
Q  237 tcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||  ||||||||| ||||| ||||    
T  28540717 tcaactatcaatagttttatatcattacatttcaa 28540683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 137 - 271
Target Start/End: Complemental strand, 23036943 - 23036806
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccac 233  Q
    ||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||| ||  ||| | |   ||||||||||||||||||  |  | ||||    
T  23036943 tgtacacatcactcaattataatttttcaatagtagtatctaataagaactcaatctcttcaacccagcatctcacacaaatttcttaatagaaatccac 23036844  T
Q  234 aaatcaactatcaataactttatatcaatacatatcaa 271  Q
      ||||||||||||||| ||||||||| ||||||||||    
T  23036843 tgatcaactatcaataattttatatcattacatatcaa 23036806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 133 - 271
Target Start/End: Complemental strand, 3628380 - 3628241
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg-ctcacacaaatttcttaaatgggaccc 231  Q
    |||||||||| |||| | ||||||||||||||||||||||| ||||||||| ||| ||| |||| ||| | |  || |||||||||||||||||  |  |    
T  3628380 cacgtgtacatatcatttatttataattttttaatagtagtgcttaataagcactaaattcctccaactcagtatctcacaaatttcttaaatgaaattc 3628281  T
Q  232 acaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |  ||||||||| |||||||||||||||| ||||| ||||    
T  3628280 attaatcaactagcaataactttatatcattacatctcaa 3628241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 5978565 - 5978617
Alignment:
Q  208 acacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  5978565 acacaaagttcttaaatgggacccactaatcaactatcaataactttatatca 5978617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 83 - 260
Target Start/End: Complemental strand, 23982451 - 23982267
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaat-agtagtacttaata 181  Q
    ||||||||| ||||||||||   || ||||||  || |||||| || || ||||||||||||||||||||||||||||||||||| |  | |||||||||    
T  23982451 taagagcattcacaatggagacacctatttttgggttcttaaatggttttcacgtgtacacatcactcatttataattttttaataaaaaatacttaata 23982352  T
Q  182 agaactcaatccctctaacactg--ctcacacaaatttcttaaatgggaccc----acaaatcaactatcaataactttatatca 260  Q
    |  || ||||| ||| ||| | |  || ||||||| ||||||||||||| ||    || || |||||||||||||||||||||||    
T  23982351 atgacccaatcactccaacccagatcttacacaaagttcttaaatgggatccacgtactaaccaactatcaataactttatatca 23982267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 255
Target Start/End: Original strand, 4797204 - 4797329
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggac 229  Q
    |||||||||  |||||| |||||||||||||||||||||| | |||||||  |   |||||||| ||| | ||   |||||||||||||||||||| |||    
T  4797204 cacgtgtacgtatcactaatttataattttttaatagtagcatttaataaatatctaatccctccaactcagcatctcacacaaatttcttaaatgtgac 4797303  T
Q  230 ccacaaatcaactatcaataacttta 255  Q
     ||  |||||||||||||||||||||    
T  4797304 tcattaatcaactatcaataacttta 4797329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 7288364 - 7288245
Alignment:
Q  144 atcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaa 240  Q
    |||||| |||||||||| ||| |||||||||  ||||||||||| |||||||| ||| | ||   ||| | |||||||||||||| |||  || ||||||    
T  7288364 atcacttatttataattgtttcatagtagtatctaataagaacttaatccctccaacccagcatctcatagaaatttcttaaatgagacttactaatcaa 7288265  T
Q  241 ctatcaataactttatatca 260  Q
    ||||| ||||||||||||||    
T  7288264 ctatcgataactttatatca 7288245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 30714095 - 30714156
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||||||||||||  |||||||||| ||| |||||||||||||||||||||||||| |||||    
T  30714095 ctcacacaaattttgtaaatgggactcactaatcaactatcaataactttatatcattacat 30714156  T

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Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 30721872 - 30721933
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||||||||||||  |||||||||| ||| |||||||||||||||||||||||||| |||||    
T  30721872 ctcacacaaattttgtaaatgggactcactaatcaactatcaataactttatatcattacat 30721933  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 260
Target Start/End: Original strand, 5139635 - 5139776
Alignment:
Q  120 cttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaattt 217  Q
    |||||| ||||||||||||||||||| |||  ||||||||||||| |  ||||||| ||||||  ||| |||| ||| ||| | |  ||||||||||  |    
T  5139635 cttaaatgggttccacgtgtacacataacttgtttataatttttttaatgtagtacctaataa-tacttaatcactccaacccagatctcacacaaagct 5139733  T
Q  218 cttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||  || ||| |||||||||||||||| |||||||||    
T  5139734 cttaaatgaaactcactaatcaactatcaataattttatatca 5139776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 8673597 - 8673706
Alignment:
Q  160 tttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttat 256  Q
    |||||||||||||||| ||||||| |||||||| ||| ||| | ||   ||||| |||||| ||||||  ||||||| |||||| |||||| ||||||||    
T  8673597 tttttaatagtagtacctaataagcactcaatctctccaacccagcatctcacataaattttttaaatttgacccactaatcaattatcaaaaactttat 8673696  T
Q  257 atcaatacat 266  Q
    |||| |||||    
T  8673697 atcactacat 8673706  T

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Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 9134229 - 9134174
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||    
T  9134229 ctcacacaaagttcttaaatgagactcactaatcaactatcaataactttatatca 9134174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 9135166 - 9135095
Alignment:
Q  120 cttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    |||||| ||||  |||||||||| |||||||||||| ||||||| ||||||||||| ||||||| ||||||||    
T  9135166 cttaaatgggtctcacgtgtacatatcactcatttacaattttt-aatagtagtacctaataagcactcaatc 9135095  T

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Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 28557392 - 28557336
Alignment:
Q  140 acacatcactcatttataattttttaatagtagtacttaataagaactcaatccctc 196  Q
    |||||||||| ||||||||||||||||||||||||| ||||||  ||||||| ||||    
T  28557392 acacatcactaatttataattttttaatagtagtacctaataactactcaattcctc 28557336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 271
Target Start/End: Original strand, 35973360 - 35973498
Alignment:
Q  136 gtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatgggaccca 232  Q
    ||||||| || ||| |||||||||||||||||||| |||| ||||||  ||| ||||| || ||| |     |||||||| |||||||||||| || | |    
T  35973360 gtgtacagattacttatttataattttttaatagttgtacctaataaacacttaatccatccaactcaatatctcacacacatttcttaaatgagatcta 35973459  T
Q  233 caaatcaactatcaataactttatatcaatacatatcaa 271  Q
    | |||||| |||||||||| |||||||| || |||||||    
T  35973460 ctaatcaattatcaataacattatatcattatatatcaa 35973498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 6427148 - 6427203
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||||||| |||||| ||||| || |||||||||||||||| |||||||||    
T  6427148 ctcacacaaattttttaaataggacctactaatcaactatcaataattttatatca 6427203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 13079985 - 13079886
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||||||| ||||||| || ||  ||||||||  ||||||||   ||  ||||||||||  ||||||||||||||||||| ||||||||||| ||||||    
T  13079985 taagagcattcacaatgaagctcttcattttttgatacttaaataagtctcacgtgtacatttcactcatttataatttttgaatagtagtacctaataa 13079886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 4326115 - 4326033
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataatttttta 165  Q
    |||||||||||||||| |||   || ||||||   |||||||| ||||  || ||||||||||||||||||||||||||||||    
T  4326115 taagagcatccacaattgagacacctatttttggatacttaaatgggtctcaagtgtacacatcactcatttataatttttta 4326033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 28538211 - 28538164
Alignment:
Q  137 tgtacacatcactcatttataatt--ttttaatagtagtacttaataa 182  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||    
T  28538211 tgtacacatcactcatttataattttttttaataatagtacttaataa 28538164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 7207141 - 7207080
Alignment:
Q  120 cttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaata 181  Q
    ||||||||||| |||| |||||||||||||  ||||| ||||| |||||  |||||||||||    
T  7207141 cttaaacgggtcccacttgtacacatcacttttttattattttataataacagtacttaata 7207080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 12734120 - 12734060
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    ||||||||||||||||||||| || |||| |||||||||||   |||||||||||| |||||    
T  12734120 ctcacacaaatttcttaaatgaga-ccactaatcaactatcctcaactttatatcattacat 12734060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 36316881 - 36316844
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagta 174  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  36316881 tgtacacatcactcatttataatattttaataatagta 36316844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 3194870 - 3194898
Alignment:
Q  135 cgtgtacacatcactcatttataattttt 163  Q
    |||||||||||||||||||||||||||||    
T  3194870 cgtgtacacatcactcatttataattttt 3194898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 5217714 - 5217616
Alignment:
Q  164 taatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatc 259  Q
    |||||||||||| ||||||||||  |||||||| ||| | ||   ||||| |||||| ||||||| ||| |||  || || ||||||||||||||||||    
T  5217714 taatagtagtacctaataagaacataatccctccaacccggcgtctcacaaaaatttattaaatgagactcactgattaattatcaataactttatatc 5217616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 12734780 - 12734748
Alignment:
Q  108 cattttttagtacttaaacgggttccacgtgta 140  Q
    |||||||||||||||||| ||||||||||||||    
T  12734780 cattttttagtacttaaatgggttccacgtgta 12734748  T

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Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 271
Target Start/End: Complemental strand, 4958431 - 4958250
Alignment:
Q  96 aatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccct 195  Q
    ||||||| || ||||||||||||| ||||| | || | |||||||||||||| ||||||||||||||||||||||||||  ||||||  |||||||||||    
T  4958431 aatggagatctccattttttagtatttaaatgagtcctacgtgtacacatcattcatttataattttttaatagtagtatctaataaacactcaatccct 4958332  T
Q  196 ctaac------actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    | |||      ||  ||||||||| |||||||||||  |||||||||||||||||||| |||||||||||| ||||||||||    
T  4958331 ccaaccgaacaacatctcacacaactttcttaaatgaaacccacaaatcaactatcaacaactttatatcattacatatcaa 4958250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 85 - 271
Target Start/End: Original strand, 47841345 - 47841534
Alignment:
Q  85 agagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataaga 184  Q
    ||||||||| ||||||||  | || |||||  ||||||||| | || |||| ||||||||| |||||||||||||||| ||||||||||| ||||||||     
T  47841345 agagcatccgcaatggagacctccttttttaggtacttaaatgagtcccacatgtacacataactcatttataattttgtaatagtagtatttaataagt 47841444  T
Q  185 actcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||| |||    |  |||||| ||| |||||||||| ||| ||||||||||||||||||||||||||| ||  |||||||||    
T  47841445 actcaatccctccaaccaagcatctcacataaagttcttaaatgagactcacaaatcaactatcaataactttataccatcacatatcaa 47841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 83 - 267
Target Start/End: Complemental strand, 19987363 - 19987175
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttc-cacgtgtacacatcactcatttataattttttaatagtagtacttaata 181  Q
    |||||||||| | ||| ||| || ||||||||||||| ||||| || | | ||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  19987363 taagagcatctataatagagatctccattttttagtatttaaatggatcctcacatgtacacatcattcatttataattttttaatagtagtacataata 19987264  T
Q  182 agaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacata 267  Q
    || ||   ||||||| |||   ||  |||||||||| ||||||||||||||| ||||||| |||||||||||||||| |||| ||||||    
T  19987263 agtacatgatccctccaacccaacatctcacacaaagttcttaaatgggacctacaaatcgactatcaataactttaaatcattacata 19987175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 36657818 - 36657986
Alignment:
Q  91 tccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaa 190  Q
    ||||||||||||   |||||||||  || |||||| ||||  || ||||||||||  |||||||||||||||||||||||| ||  ||||||| ||||||    
T  36657818 tccacaatggagacacccatttttgggttcttaaatgggtctcatgtgtacacattgctcatttataattttttaatagtactatctaataagcactcaa 36657917  T
Q  191 tccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttata 257  Q
    || ||| ||| | |  |||||||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  36657918 tcactccaacccagatctcacacaaagttcttaaatgggacccactaatcaactatcaataattttata 36657986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 43302094 - 43302219
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccaca 234  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||  |||||||| ||| ||    |  |||||||| | ||||||||||||||||||     
T  43302094 tgtacacataactcatttataattttttaatagtagtacctaataaatactcaatcactccaatctagatctcacacataattcttaaatgggacccact 43302193  T
Q  235 aatcaactatcaataactttatatca 260  Q
    ||||||||||||||||||||||||||    
T  43302194 aatcaactatcaataactttatatca 43302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 31330541 - 31330406
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaa 235  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||| |||   ||   |||||||||||||||||||| |||  || |    
T  31330541 tacacatcactcatttataattttttaatggtagtacctaataagcactcaatccctccaacccaacatttcacacaaatttcttaaatgagacgtacta 31330442  T
Q  236 atcaactatcaataactttatatcaatacatatcaa 271  Q
    ||||||||||||||| | ||||||| ||||| ||||    
T  31330441 atcaactatcaataagtatatatcattacatttcaa 31330406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 109 - 258
Target Start/End: Original strand, 36481954 - 36482105
Alignment:
Q  109 attttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ct 206  Q
    |||||| ||| ||||||  |||| |||||||||| |||||||| || |||| |||||||||||||| |||||||| |||||||| ||||||| | |   |    
T  36481954 atttttgagttcttaaataggtttcacgtgtacatatcactcacttgtaatattttaatagtagtatttaataagcactcaatcactctaacccagatat 36482053  T
Q  207 cacacaaatttcttaaatgggacccacaaatcaactatcaataactttatat 258  Q
    |||||||| |||||||||| ||  ||| ||||||||||||||||||||||||    
T  36482054 cacacaaagttcttaaatgagattcactaatcaactatcaataactttatat 36482105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 121 - 271
Target Start/End: Original strand, 46747992 - 46748139
Alignment:
Q  121 ttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgctcacacaaatttctt 220  Q
    ||||| |||| |||| | ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||| ||   | ||||||    ||| |     
T  46747992 ttaaatgggtcccacttatacacatcacttatttataattttttaatagtagcacctaataagaactcaatccctcaaa---ttctcacaatttttttta 46748088  T
Q  221 aaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    ||||||||||| | |||||||| ||||||||||||||||| ||||||||||    
T  46748089 aaatgggaccccctaatcaactgtcaataactttatatcattacatatcaa 46748139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 44441740 - 44441609
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccac 233  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||  ||| ||| | |   |||||| |||||||||||||| |||||||    
T  44441740 tgtacacatcactcatttataattttttaacggtagtacctaataagaactcaatatctccaacccagcatctcacaaaaatttcttaaatgagacccac 44441641  T
Q  234 aaatcaactatcaataactttatatcaataca 265  Q
     ||||||||||||| ||||  |||||| ||||    
T  44441640 taatcaactatcaacaactggatatcattaca 44441609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 36656556 - 36656720
Alignment:
Q  109 attttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac-actg-ct 206  Q
    ||||||| ||||||||| ||||  ||| | || | ||||||||||||||||||||||||||| |||  ||||||  |||||||||||| ||  | |  ||    
T  36656556 attttttggtacttaaatgggtctcacttatatatatcactcatttataattttttaatagtggtatctaataaatactcaatccctccaattagtatct 36656655  T
Q  207 cacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    || ||||| |||||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||    
T  36656656 catacaaagttcttaaatgagacccataaatcaactattaataactttatatcattacatatcaa 36656720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 48767128 - 48767258
Alignment:
Q  136 gtgtacacatcactcatttataatttttt-aatagtagtacttaataaga-actcaatccctctaacactg---ctcacaca-aatttcttaaatgggac 229  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||  ||||||| ||||||||   |   |||||| | ||||||||||||| |||    
T  48767128 gtgtacacatcactcatttataatttttttaatagtagtacctaataagccactcaatacctctaacctagtatctcacaaataatttcttaaatgagac 48767227  T
Q  230 ccacaaatcaactatcaataactttatatca 260  Q
    |||| ||||||||||||||||||||||||||    
T  48767228 ccactaatcaactatcaataactttatatca 48767258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 32724438 - 32724243
Alignment:
Q  82 ataagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaata 181  Q
    |||||||||||||||||||||   || ||||||  |||||||||  ||| || | |||||| |||| |||||||||||||||||||||| || | |||||    
T  32724438 ataagagcatccacaatggagacacctatttttgggtacttaaattggtcccgcatgtacatatcattcatttataattttttaatagtggtgcctaata 32724339  T
Q  182 agaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatcaac---tatcaataactttatatcaatacatatcaa 271  Q
    |||||  |||  ||| |||   ||  |||| ||||||||||||||||| |||||| ||| |||   ||||||||||||||||||| ||||||||||    
T  32724338 agaaccaaatttctccaacccaacatctcaaacaaatttcttaaatggaacccactaattaactagtatcaataactttatatcattacatatcaa 32724243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 83 - 257
Target Start/End: Complemental strand, 39853969 - 39853795
Alignment:
Q  83 taagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||| |||||||||||||| | | |||||||| || |||||| | ||  ||| ||||||||| ||| ||||||   ||||||||  |||||  ||||||    
T  39853969 taagaacatccacaatggagatactcattttttggttcttaaatgagtcacacatgtacacattacttatttat---tttttaattatagtatgtaataa 39853873  T
Q  183 gaactcaatccctctaacactgc---tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttata 257  Q
    |||||||||| ||| |||   ||   ||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  39853872 gaactcaatcgctccaacctagcatctcacaaaaatttcttaaatgggacccactaatcaactatcaataactttata 39853795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 2008718 - 2008601
Alignment:
Q  157 aattttttaatagtagtacttaataa-gaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactt 253  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| | |  |||||||||||||||||||||| ||||   |||||||||||||||| ||    
T  2008718 aattttttagtagtagtacttaataaagtactcaatccctctaacccagatctcacacaaatttcttaaatggaacccgttaatcaactatcaataattt 2008619  T
Q  254 tatatcaatacatatcaa 271  Q
    |||| || ||||| ||||    
T  2008618 tataccattacatttcaa 2008601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 23801752 - 23801860
Alignment:
Q  82 ataagagcatccacaatggaggtccccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaata 181  Q
    |||||||||| ||||||||||   | |||||||| ||||||||| | |||||||||||||| ||||| | ||| ||||||||||||| |||||| |||||    
T  23801752 ataagagcattcacaatggagacactcattttttggtacttaaatgagttccacgtgtacatatcacccgtttttaattttttaataatagtacctaata 23801851  T
Q  182 agaactcaa 190  Q
    || ||||||    
T  23801852 agtactcaa 23801860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 23156217 - 23156347
Alignment:
Q  138 gtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaa 235  Q
    ||||||||||   ||||||| |||| |||||||||||  ||||||| ||| |||||||| |||   |  |||||||||| |||||||||| ||||||  |    
T  23156217 gtacacatcatcaatttatagttttataatagtagtagctaataagcacttaatccctccaacctagatctcacacaaagttcttaaatgagacccatta 23156316  T
Q  236 atcaactatcaataactttatatcaatacat 266  Q
    ||||||||||||||||||||||||| |||||    
T  23156317 atcaactatcaataactttatatcactacat 23156347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 31322258 - 31322337
Alignment:
Q  107 ccattttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaac 186  Q
    ||||||||| ||||||||| ||||  ||  |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  31322258 ccattttttggtacttaaatgggtcacatatgtacacatcactcatttataattttttaacagtagtacctaataagaac 31322337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 37698644 - 37698505
Alignment:
Q  127 gggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaat 224  Q
    |||| ||||| ||| |||||||| ||||||||| ||  ||||||||||| ||||||| |||||||||||| ||| |    |||||||||| |||||||||    
T  37698644 gggtcccacgcgtaaacatcactaatttataatgtt--aatagtagtacctaataagcactcaatccctccaacccaaatctcacacaaaattcttaaat 37698547  T
Q  225 gggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    |  |||||| ||| ||||||||| |||||||||||| |||||    
T  37698546 gaaacccactaataaactatcaacaactttatatcactacat 37698505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 143 - 271
Target Start/End: Original strand, 29914383 - 29914515
Alignment:
Q  143 catcactcatttataattttt-taatagtagtacttaataagaactcaatccctctaac---actgctcacacaaatttcttaaatgggacccacaaatc 238  Q
    ||||||| ||||||||||||| |||||||| ||| ||||||  ||| |||||||| |||   ||  |||||||||||||| |||||||||| | | ||||    
T  29914383 catcacttatttataatttttataatagtaatacctaataaacacttaatccctccaacttaacatctcacacaaatttcataaatgggactcgctaatc 29914482  T
Q  239 aactatcaataactttatatcaatacatatcaa 271  Q
    |||||||||||||||||||| | ||||| ||||    
T  29914483 aactatcaataactttatattattacatttcaa 29914515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 5513817 - 5513959
Alignment:
Q  133 cacgtgtacacatcactcatttataa-ttttttaatagtagtacttaataagaactcaatccctctaacactg---ctcacacaaatttcttaaatggga 228  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||  |||||||  ||||||||||| ||| | |   ||||| ||||||| ||||||| ||    
T  5513817 cacgtgtacacatcacttatttataatttttttaatagtaatatctaataagttctcaatccctccaaccccgtatctcacgcaaattttttaaatgaga 5513916  T
Q  229 cccacaaatcaactatcaataactttatatcaatacatatcaa 271  Q
    | ||| |||| || |||||||||||||||| | ||||| ||||    
T  5513917 ctcactaatcgaccatcaataactttatataattacatttcaa 5513959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 13057948 - 13057880
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatcaatacatatcaaat 273  Q
    ||||||||||||||||||||| |||  || ||||||||||||||||||||||||||  |||| ||||||    
T  13057948 ctcacacaaatttcttaaatgtgacttactaatcaactatcaataactttatatcataacatttcaaat 13057880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 30859723 - 30859633
Alignment:
Q  134 acgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaa 222  Q
    ||||||| | ||||||||||||||||||||||||||||||||  |||||| ||||||| |||| ||| | |  |||||| |||||||||||    
T  30859723 acgtgtatatatcactcatttataattttttaatagtagtacccaataagtactcaattcctccaacccagatctcacaaaaatttcttaa 30859633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 36901033 - 36901138
Alignment:
Q  159 ttttttaatagtagtacttaataa-gaactcaatccctctaacactg---ctcacacaaatttcttaaatgggacccacaaatcaactatcaataacttt 254  Q
    ||||||||||||||||| |||||| ||| |||||||||| |||   |   |||||| |||||||||||||| |||| || |||||||||||||||| |||    
T  36901033 ttttttaatagtagtacctaataaagaattcaatccctccaaccgagtatctcacaaaaatttcttaaatgagacctactaatcaactatcaataatttt 36901132  T
Q  255 atatca 260  Q
    ||||||    
T  36901133 atatca 36901138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 44441347 - 44441394
Alignment:
Q  219 ttaaatgggacccacaaatcaactatcaataactttatatcaatacat 266  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  44441347 ttaaatgggacccactaatcaactatcaataactttatatcactacat 44441394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 25307463 - 25307595
Alignment:
Q  142 acatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc--tc-acacaaatttcttaaatgggacccacaaatc 238  Q
    ||||||||  ||||||||||||||||||| |||  ||| ||| | |||||| ||||||  || |  || |||||||||||||||||| || |||||||||    
T  25307463 acatcacttttttataattttttaatagttgtatctaacaagcattcaatctctctaaacctacattcgacacaaatttcttaaatgagatccacaaatc 25307562  T
Q  239 aactatcaataactttatatcaatacatatcaa 271  Q
    ||| ||||||||  |||||||| ||||| ||||    
T  25307563 aacaatcaataaacttatatcattacatctcaa 25307595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 260
Target Start/End: Original strand, 46282182 - 46282231
Alignment:
Q  211 caaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||||||    
T  46282182 caaatttcttaaatgagacccactaatcaactatcaataattttatatca 46282231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 7751908 - 7751858
Alignment:
Q  206 tcacacaaatttcttaaatgggacccacaaatcaactatcaataactttat 256  Q
    |||||||||||| ||||||| ||| |||||||||||| |||||||||||||    
T  7751908 tcacacaaattttttaaatgagactcacaaatcaactgtcaataactttat 7751858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 266
Target Start/End: Original strand, 48615259 - 48615395
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactgc---tcacacaaatttcttaaatgggac 229  Q
    ||||||||||||  |||||||| |||||||||||   |||||| ||||||  | ||||| |||| ||  | ||   |||||||||||||||||| || |     
T  48615259 cacgtgtacacaatactcatttttaattttttaacgttagtacctaataaacattcaattcctccaagccagcacctcacacaaatttcttaaacggaat 48615358  T
Q  230 ccacaaatcaactatcaataactttatatcaatacat 266  Q
    |||  ||||| |||||||||||||||||||| |||||    
T  48615359 ccattaatcatctatcaataactttatatcattacat 48615395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 9429791 - 9429742
Alignment:
Q  133 cacgtgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    |||||||||||| || ||||||||||||||||||| ||||||| ||||||    
T  9429791 cacgtgtacacaacattcatttataattttttaattgtagtacctaataa 9429742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 33661475 - 33661520
Alignment:
Q  137 tgtacacatcactcatttataattttttaatagtagtacttaataa 182  Q
    ||||||||||||||||| |||||||||||||  |||||| ||||||    
T  33661475 tgtacacatcactcattaataattttttaatgttagtacctaataa 33661520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 38360762 - 38360815
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagtacttaataagaactcaatc 192  Q
    |||| |||||| ||| ||||||||||||||||||||  ||||||| ||||||||    
T  38360762 tacatatcactgattcataattttttaatagtagtatctaataagcactcaatc 38360815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 15017429 - 15017473
Alignment:
Q  152 tttataattttttaatagtagtacttaataagaactcaatccctc 196  Q
    ||||||||||||||||| |||||||||||||| | ||||| ||||    
T  15017429 tttataattttttaatattagtacttaataagcattcaattcctc 15017473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 139 - 167
Target Start/End: Complemental strand, 32116915 - 32116887
Alignment:
Q  139 tacacatcactcatttataattttttaat 167  Q
    |||||||||||||||||||||||||||||    
T  32116915 tacacatcactcatttataattttttaat 32116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 63727 - 63593
Alignment:
Q  109 attttttagtacttaaacgggttccacgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaac---actgc 205  Q
    ||||||| |||||||||  |||  ||||||||||  ||||| ||||||||||||||||||||||||| ||||||| |||||||| |||||||    |  |    
T  63727 attttttggtacttaaataggtctcacgtgtacatgtcactaatttataattttttaatagtagtacctaataaggactcaatctctctaacccatcatc 63628  T
Q  206 tcacacaaatttcttaaatgggacccacaaatcaa 240  Q
    ||||||| ||||||||||| |||| ||| ||||||    
T  63627 tcacacatatttcttaaattggactcactaatcaa 63593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 2118 - 2173
Alignment:
Q  205 ctcacacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||||| ||||||||| |||  ||| |||||||||| |||||||||||||||    
T  2118 ctcacacaaagttcttaaataggattcactaatcaactattaataactttatatca 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 31782 - 31901
Alignment:
Q  141 cacatcactcatttataattttttaatagtagtacttaataagaactcaatccctctaacactg--ctcacacaaatttcttaaatgggacccacaaatc 238  Q
    ||||||||||||||||||||| ||||||||||||   |||||| | |||||  ||| ||| | |   ||||||||| ||||||||| ||||  |  ||||    
T  31782 cacatcactcatttataatttcttaatagtagtatcaaataagcattcaattactccaacccagatttcacacaaagttcttaaataggactaagtaatc 31881  T
Q  239 aactatcaataactttatat 258  Q
    ||||| ||||||||||||||    
T  31882 aactaacaataactttatat 31901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 2933 - 2984
Alignment:
Q  209 cacaaatttcttaaatgggacccacaaatcaactatcaataactttatatca 260  Q
    |||||||||||||||| |||| ||| |||| ||||||||||| |||||||||    
T  2933 cacaaatttcttaaataggacacactaatccactatcaataattttatatca 2984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 55755 - 55790
Alignment:
Q  139 tacacatcactcatttataattttttaatagtagta 174  Q
    |||||||||||||||||||||||||||||| |||||    
T  55755 tacacatcactcatttataattttttaatattagta 55790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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