View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8906_low_44 (Length: 289)
Name: NF8906_low_44
Description: NF8906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8906_low_44 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 36759064 - 36758791
Alignment:
| Q |
1 |
gcagtagatatcgatcagagttgtatcatcaaaactgatttgtgagcaccatgttgttgtaatgttaatagccattgcaattaataacttccgaactcga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36759064 |
gcagtagatatcgatcagagttgtatcatcaaaactgatttgtgagcaccatgttgttgtaatgttaatagccattgcaattaataacttccgaactcga |
36758965 |
T |
|
| Q |
101 |
atagtacgagcttgagtttggatttgagcacaaaaatgaattcccacagctccaatgctgttttctgtatattagaggtctgaaaa-accctctctgtaa |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
36758964 |
atagtacgagcttgagtttggatttgagcacaaaaatgaattcccacagctccaatgctgttttctgtatattagaggtctgaaaagaccctctctgtaa |
36758865 |
T |
|
| Q |
200 |
aatgtatcataacccacacacattttagaacatctattttgagaaattttctaataaacggtatgttttctgca |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
36758864 |
aatgtatcataacccacacacattttagaacatctattttgagaaattttctaataaacagtatgttttctgca |
36758791 |
T |
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