View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8906_low_56 (Length: 241)
Name: NF8906_low_56
Description: NF8906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8906_low_56 |
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Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 19149010 - 19148771
Alignment:
| Q |
1 |
atgtctacacataaccatggatgactatacacctcaaattatcatgtaaaaatcaaaagtacacaggatagttacattccaaaacatttgcaataacaga |
100 |
Q |
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| T |
19149010 |
atgtctacacataaccatggatgactatacacctcaaattatcacataaaaatcaaaagtacagaggatagtaacattccaaaacatttgcaataacaga |
19148911 |
T |
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| Q |
101 |
aacaacgtgaatgaacgaggaatcacggtccaaacccacacaaatgaataataaataagcatagcaaacaacaggattcaacaactatatagttctttta |
200 |
Q |
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| T |
19148910 |
aacaatgtgaatgaacgaggaatcacagtccaaacccacacaaatgaataataaataagcatagcaaacaacaggattcaacaaatatatagttctttta |
19148811 |
T |
|
| Q |
201 |
tcataactctactttaactttgtaatgatgtccatctcat |
240 |
Q |
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| T |
19148810 |
tcataactctactttaactttgtaatgttgtttatctcat |
19148771 |
T |
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