View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8908_high_3 (Length: 797)
Name: NF8908_high_3
Description: NF8908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8908_high_3 |
 | |
|
| [»] chr3 (13 HSPs) |
| |
|
| [»] scaffold0691 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 771; Significance: 0; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 771; E-Value: 0
Query Start/End: Original strand, 19 - 797
Target Start/End: Original strand, 2838164 - 2838942
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2838164 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttatgaatatgagttagaa |
2838263 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838264 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
2838363 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838364 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
2838463 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838464 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
2838563 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838564 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
2838663 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838664 |
gcgctcagctgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
2838763 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838764 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
2838863 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
797 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2838864 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
2838942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 537; E-Value: 0
Query Start/End: Original strand, 19 - 797
Target Start/End: Original strand, 2855374 - 2856149
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2855374 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttatgaatatgagttagaa |
2855473 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2855474 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaacctggtcgga |
2855573 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||| | ||||||||||||||||||| |||||||| |
|
|
| T |
2855574 |
aaaatcttcttgccaaacatcatcaaagaataccaaatacctcttatgttgcaggtattgccttacttgtataatcagtgactggtcatccattttgtgc |
2855673 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2855674 |
aacatcagtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgatgcaag |
2855773 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||| || ||| | |
|
|
| T |
2855774 |
cacgacaatcaaagtttgttgttaccttttggctgtcaaaaattagcttggcaagagtagtttttcctataccccccattcccaccactgaaatcacttt |
2855873 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||||||| | ||| ||||||||||||||| | | ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2855874 |
gcgctcagatataccttccaataaccaaccagacaattcttcttttgggccttcaatgcctacaacttctgtttcttcaatgaaaagggaagacagtcga |
2855973 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || |||||||||||||||||| |||||| ||||| ||| || ||||||||||||||| || | ||||||||||||||||||||||| ||||| |
|
|
| T |
2855974 |
ggatcacgccatcttccattttctgtctctcc---actgcggtttctttggcttgaggatccttgctcgtgtgaaatttgaaagttatacctctggcttc |
2856070 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
797 |
Q |
| |
|
||| ||||||||| || ||| || ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
2856071 |
tttccttgattccacgaattgacaacttgatgtcctgaatctctgatgcaattttatgatggggaatcaaagttttgat |
2856149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 19 - 797
Target Start/End: Complemental strand, 2759788 - 2759013
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
|||||| |||| ||| | ||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||| |
|
|
| T |
2759788 |
ggacaacgccctccaagatcatatctaaatactttcttgcagaagagttcccatgctttgtttggagtcaaaagttgcaagttgtgaacatgaactagaa |
2759689 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
| |||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2759688 |
atgatttcttgaaaaaatctgcaacttgcataattctagtggtgattatgatcctactacctttgttgttattaggcatggcaaattcaacctggtcgga |
2759589 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||| || ||| |||||||||| ||||||| ||||||| |
|
|
| T |
2759588 |
aaaatcttcttgccatacatcatcaaagaatatcaaatacctcttatgttctaggtatttccttacctctgtaatcagtgacctgtcatccattttgtgt |
2759489 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
||| ||| ||||||||||||||||||| || ||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||||| || ||||| |
|
|
| T |
2759488 |
aacttctttggaagagggtcttcagtttcctgacaaaattgcgccatcatttttatcagtaatcctctcacagtgtatgattgagaaactacgatgcaag |
2759389 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
| | ||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||| |
|
|
| T |
2759388 |
cttgacaatcaaactgtgttgttaccttttggctgtcaaaaactagcttggcaagagtggttttgccgagaccccccattcctaccactgaaatcactgt |
2759289 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||| ||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2759288 |
gcgttcagctgaaccctccaataaccaaccatatagttcttcttttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
2759189 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || ||||||||||||||||| |||| | | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2759188 |
ggatcacgccatcttccattttctttctcttcgg---tagtgttgctgctgtttgaggatccttgttcatttgaaatttgaaagttatacctcacgcttc |
2759092 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
797 |
Q |
| |
|
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2759091 |
tttccttgattccgtgaattgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
2759013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 19 - 797
Target Start/End: Complemental strand, 2769643 - 2768868
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||| |||||| || |||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||| ||| ||| |||| ||||| |
|
|
| T |
2769643 |
ggacattgcccatcaagttcaaatctgaatgctttcttgcagaagagttcccatgctttgttaggaggcaaaagttgcatgttaagaacatgaactagaa |
2769544 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| || || |||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||| |
|
|
| T |
2769543 |
aggatttcttgaaaaaatctgcaacatgcatcattcttgtggttattatgatcctactacgtttattgttatttggcatggaaaattcaacctggtcgga |
2769444 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| ||| || ||| | ||||||| ||||||| ||||||| |
|
|
| T |
2769443 |
aaaatcttcttgccatacatcatcaaagaatatcaaatacctcttatgttgtaggtatttccttacctctattaccagtgacatgtcatccattttgtgt |
2769344 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
||||||| | | ||||| ||||||||| || ||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2769343 |
aacatctttagcagaggttcttcagtttcctgacaaaattgctccatcatttttatcagtaaccctctcacagtgtatgattgagaaactgtgatgcaag |
2769244 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2769243 |
cacgacaatcaaagtttgcagttaccttttggctgtcataaactagtttggcaagagtggtttttcctagaccccccattcctaccactgatatcactgt |
2769144 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||||| | ||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||| ||| |
|
|
| T |
2769143 |
gcgcttagctgcaccctccaataaccaaccaaataattcttctcttgggccttccaatcctacaatttctgtttcttcaataaagagggaagacatccga |
2769044 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || ||||||||||| |||||| |||||| ||| ||||| |||||| |||||||||||||||||| |||| |||||||| ||||||||||||||| |
|
|
| T |
2769043 |
ggatcacgccatcttccactttctgactctcc---actactgttcctgctgtttgaggatccttgttcatgtgaagtttgaaagctatacctctcgcttc |
2768947 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
797 |
Q |
| |
|
||| ||||||||| || ||| || ||| ||||| ||||||||| |||||||||| ||||||||| ||||||||||||| |
|
|
| T |
2768946 |
tttccttgattccacgaattgacaacttaatgtcctgaatctctaatgcaattttatgacggggagtcaaagttttgat |
2768868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 19 - 796
Target Start/End: Complemental strand, 2807841 - 2807070
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||| |||||| || | || ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||| |
|
|
| T |
2807841 |
ggacagtgcccatcaagatcgaatctaaatactttcttgcagaagagttcccatgctttgtttggagtcaaaagttgcaagttgtgaacatgaactagaa |
2807742 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| || |
|
|
| T |
2807741 |
aggatttcttgaaaaaatctgcaacttgcatcattctagttgtgattatgatcctactacctttattgttgttaggcatagcaaattcaacctggtcaga |
2807642 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| | ||||||| |||| | |
|
|
| T |
2807641 |
aaaatcttcttgccatacatcatcaaagaatatcaaatacctcttatgttgcaggtattgcctcacttctacaatcagtgatttgtcatccaatttgcgt |
2807542 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
||| | | ||||||||||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||| |
|
|
| T |
2807541 |
aacttatttggaagagggtcttcagtttcctgacaaaattgctccatcatgtttatcatcaaccctctcacagtgtatgattgagaaactgcgatgcaag |
2807442 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|| ||||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || || || || |
|
|
| T |
2807441 |
cacgacaatcaaagtgtgttgttaccgtttggctatcaaaaactagcttggcaagagtggtttttcctagacctcccattcctaccaccgaaatcaccgt |
2807342 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||||||| || ||||||||||||||||| || | ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
2807341 |
gcgctcagctacaccctccaataaccaaacagacatttcttctcttgggaattcaaatcctacaatttctctttcttcaataaaaagggaagacagtcga |
2807242 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || |||||||||||||||||| ||||| || |||||| ||| |||||| ||||||||||||| ||||||||| |||||||||||||| |||| |
|
|
| T |
2807241 |
ggatcacgccatcttccattttctgtctctctag---tgctgt---tgcggcttgatgatccttgttcatgtgaaatttgtaagttatacctctcacttc |
2807148 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttga |
796 |
Q |
| |
|
||| |||||||||| || | || ||| |||||| | |||| ||||| || | |||||||||||||||||||||| |
|
|
| T |
2807147 |
tttccttgattccgcgaaccgacaccttaatgtctcggatcttagatgctatatgatgacggggaatcaaagttttga |
2807070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 19 - 797
Target Start/End: Complemental strand, 5413460 - 5412706
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||||| ||||||| ||||||||| ||| || ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
5413460 |
ggacaattcccaccaagttcaaatccaaacaccttcttgcagtaaagttcccatgctttgtttggaggcaaaagttgcaggttgtgaacatatactagaa |
5413361 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
||||||| |||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| || |
|
|
| T |
5413360 |
aggattttttgaaaaaatccgcaacttgcatcattctagtggtgattatgatcctactacctttattgtttttaggcatcgcaaattcaacctggtcaga |
5413261 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||| |
|
|
| T |
5413260 |
gaaatcttgttgccatacatcatcaaagaatatcaaatacctcttatgttgcaggtattgcctcacttctataatcagtgaccggtcatccattttgtgt |
5413161 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5413160 |
aacatctgcggaagagagtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgttacgcaag |
5413061 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5413060 |
cacaacaatcaaagtgtgctgataccttttggctttcaaaaactagcttggcaagagtggtttttcctaggccccccattcctaccactgatatgactgt |
5412961 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
|| || ||||||| ||||||||||||||| | | ||||||| |||| ||||||| |||||||| |||||||||| |||||| ||||||||||||||| |
|
|
| T |
5412960 |
acgttccgctgcaccatccaataaccaaccagacaattcttcttttggaccttcaattcctacaacttctgtttctgtaatgaatagggaagacagtcga |
5412861 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
5412860 |
ggatctcgccatcttccattttctgtctctc---tactgctgttgctgc---------------------ttgaaatttgaaagttatacctctcacttc |
5412785 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
797 |
Q |
| |
|
||| ||||||||| || ||| || ||| ||||| |||||||| ||||| || | ||| ||||||||||||||||||| |
|
|
| T |
5412784 |
tttccttgattccacgaattgacaacttaatgtcctgaatctcagatgctatctgatgatggggaatcaaagttttgat |
5412706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 19 - 797
Target Start/End: Complemental strand, 2749569 - 2748797
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
|||||||| |||||| | ||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2749569 |
ggacaatgtccaccaagctcatatctaaatactctcttgcagaaaagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
2749470 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
||||||| |||||||| |||||||||| |||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||| || |||||| | |
|
|
| T |
2749469 |
aggattttttgaaaaaatctgcaacatacatcattctagtggtgatgataatcctactacctttattgttatttggcatggcaaattgaacctggtccgc |
2749370 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||| |
|
|
| T |
2749369 |
aaaatcttcttgccatacgtcatcaaagaatatcaaatacctcttatgttgcaggtattgcctcacttctataattagtgactggtcatccattttgtgt |
2749270 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
|||||||| |||||| ||||| ||| | |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2749269 |
aacatctgcagaagagagtctttagtactccgacagaattgctccatcatgtttatcaacaaacctctcacagtgtaagattgagaaactgtgacgcaag |
2749170 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| || || |
|
|
| T |
2749169 |
cacgacaatcaaagtgtgctgatacctttttgctttcaaaaactagcttggcaagagtggtttttcctaggcctcccattcctaccacggatatcaccgt |
2749070 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||||||| || |||| ||||||||||||||| | | ||||||| ||||| |||||| || |||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
2749069 |
gcgctcagcttcaccatccaataaccaaccagacagttcttcttttgggacttcaataccaacaacttctgtttcttcaataaaaagagaagacagtcga |
2748970 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || |||||| ||||||||||| |||||| || | |||||||||| | ||||||||| | |||||||||||||||||||||||| |||| |
|
|
| T |
2748969 |
ggatcatgccattttccattttctctctctcc------tatgctaatgctgcttgaagttccttgttcgtgtgaaatttgaaagttatacctctcacttc |
2748876 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagttttgat |
797 |
Q |
| |
|
||| ||||||||| || ||| | || ||||| ||||| || ||||| || | ||||||||||||||||||||||| |
|
|
| T |
2748875 |
tttccttgattccacgaattgataatttaatgtcctgaatttcagatgctatatgatgacggggaatcaaagttttgat |
2748797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 43 - 791
Target Start/End: Complemental strand, 2819107 - 2818362
Alignment:
| Q |
43 |
ctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaaaggatttcttgaaaaattctgcaa |
142 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| |||| |||||| |||||||||||||| ||||||| |
|
|
| T |
2819107 |
ctaaatactttcttgcagaagagttcccatgctttgtttggagtcaaaagttgcaagttgtgaacatgaactagaaatgatttcttgaaaaaatctgcaa |
2819008 |
T |
|
| Q |
143 |
catgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcggaaaaatcttcttgccaaacatcatc |
242 |
Q |
| |
|
| ||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
2819007 |
cttgcatcattcttgtggtgattatgatcctactacctttgttgttattgggcatggcaaattcaacctggtcggaaaaatcttcttgccatacatcatc |
2818908 |
T |
|
| Q |
243 |
aaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgcaacatctgtggaagagggtcttca |
342 |
Q |
| |
|
||||||||| || ||||||||||||| ||||||| ||| || ||| ||||||| || ||||||| ||||| | || |||| | || |||||||||| |
|
|
| T |
2818907 |
aaagaatattaaatacctcttatgttctaggtatttccttacctctataatcagtaacctgtcatccattttgcgtaaaatctctagatcagggtcttca |
2818808 |
T |
|
| Q |
343 |
gttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaagcataacaatcaaagtttgctgtta |
442 |
Q |
| |
|
| | || || |||||||||||||||| ||||||| || ||||||||||||||||||||||||||| || |||||| ||||||||| | || ||||| |
|
|
| T |
2818807 |
gcttcctgataaaattgctccatcatttttatcagtaatcctctcacagtgtatgattgagaaactacgatgcaagctcgacaatcaaactgtgttgtta |
2818708 |
T |
|
| Q |
443 |
ccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgtgcgctcaactgcaccctccaataa |
542 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
2818707 |
ccttttggctgtcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatcactgtgcgctcggctgcaccctccaataa |
2818608 |
T |
|
| Q |
543 |
ccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcgagggtcgtgccatcttccattttct |
642 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||| ||| | ||| |
|
|
| T |
2818607 |
ccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagacagtcgaggatcacgccatcctcctgtgtct |
2818508 |
T |
|
| Q |
643 |
gcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttcttttcttgattccgtgagttgtca |
742 |
Q |
| |
|
| |||||| || | |||||| || |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || ||| || |
|
|
| T |
2818507 |
gactctcc---acatccgttgctttggcacgaggatccttgttcatgcgaaatttggaagttatacctctcgcttctttccttgattccacgaattgaca |
2818411 |
T |
|
| Q |
743 |
gcttgatgtcttgaatctctgatgcaattttgtgacggggaatcaaagt |
791 |
Q |
| |
|
||||||||| ||||||||||||||||||| | ||||||| ||||||| |
|
|
| T |
2818410 |
acttgatgtcctgaatctctgatgcaatttcataacggggagtcaaagt |
2818362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 731
Target Start/End: Complemental strand, 2797935 - 2797226
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||||||||||||| |||||||| ||| ||||||| |||||||||||||||| ||||||||| | ||||||||||| |||||||| |||| | ||| |
|
|
| T |
2797935 |
ggacaatgcccaccaacctcaaatctgaatgctttcttgcagaagagttcccatgatttgtttggtgtcaaaagttgcaagttgtgaacatgaacttgaa |
2797836 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||| || ||||| ||||||||| | |||| ||||||||||||||||||||||||| |||||| || |
|
|
| T |
2797835 |
aggatttcttgaaaaaatctgcaacttgcatcattctcgtggtgatgatgatcctatttgctttgttgttattaggcatggcaaattcaacctggtcaga |
2797736 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||| ||| | |||||||| |||||||||||||||| | ||||| ||||| ||||||| ||||||| |
|
|
| T |
2797735 |
aaagtcttcttgccatacatcatcaaagaatatcaaatactttttatgttgcaggtattgcctcacttgtataatcaatgacttgtcatccattttgtgt |
2797636 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
|||||||| ||||||| ||||||| | | |||||||| |||||||||||| ||||| | || ||||| |||||||||||||||||||||| ||||| |
|
|
| T |
2797635 |
aacatctgcaaaagagggctttcagtttcgctacaaaattcctccatcatgttgatcaatatccccctcacggtgtatgattgagaaactgtgatgcaag |
2797536 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|| ||||||||| |||| |||||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||| |
|
|
| T |
2797535 |
cacgacaatcaaattttgttgttaccttttgactgtcgaaaactagcttggcaagagtggtttttcctagacctcccattccaaccactgaaatcactgt |
2797436 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||||||| ||| ||||| | |||||||||| | | |||||| || |||||||||||||| |||||| | ||||||||||| |||||||||||||||||| |
|
|
| T |
2797435 |
gcgctcagctgtgccctctagtaaccaaccagacaattcttccctcgggccttcaaatccgacaattgcagtttcttcaataaaaagggaagacagtcga |
2797336 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || |||||||| ||| || | ||||| |||||||||| |||||||||| |||||| || | |||||||||||||||||||||||| |||| |
|
|
| T |
2797335 |
ggatcacaccatcttctattatccgtctctc---tactgctgttgttgctgcttgatgatcctggtgtctgtgaaatttgaaagttatacctctcacttc |
2797239 |
T |
|
| Q |
719 |
ttttcttgattcc |
731 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
2797238 |
tttccttgattcc |
2797226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 19 - 420
Target Start/End: Complemental strand, 2790894 - 2790493
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||||||||||||| | |||||||| ||| ||||||| |||||||||||||||||||||||||| | ||||||||||| |||||||| |||| ||||| |
|
|
| T |
2790894 |
ggacaatgcccaccaagctcaaatctgaatgctttcttgcagaagagttcccatgctttgtttggtgtcaaaagttgcaagttgtgaacatgaactagaa |
2790795 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
2790794 |
aagatttcttgaaaaaatctgcaacttgcatcattctagtggtgattatgatcctacaacctttattgttatttggaatggcaaattcaatctggtcgga |
2790695 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||| ||| | ||||||| |||||||||||||||| | ||| ||||||| ||||||| ||||||| |
|
|
| T |
2790694 |
aaaatcttcttgccatacatcatcgaagaatatcaaatactttttatgtttcaggtattgcctcacttgtagaatgagtgacttgtcatccattttgtgt |
2790595 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
|||||||| ||||||| |||||||| | | |||||||| |||||||||||| ||||| | || ||||| ||| ||||||||||||| |||| ||||| |
|
|
| T |
2790594 |
aacatctgcaaaagagggccttcagtttcgctacaaaattcctccatcatgttgatcaatatccccctcacggtgaatgattgagaaacggtgatgcaag |
2790495 |
T |
|
| Q |
419 |
ca |
420 |
Q |
| |
|
|| |
|
|
| T |
2790494 |
ca |
2790493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 469 - 797
Target Start/End: Complemental strand, 2790491 - 2790166
Alignment:
| Q |
469 |
gcaagagtggtttttcctagaccccccattcctaccactgatatgactgtgcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggc |
568 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||| || |||||||||||| ||| |||||||||||||||||| | | |||||| || |||| |
|
|
| T |
2790491 |
gcaagagtggtttttcctagacctcccattccaaccactgaaatcactgtgcgctcagctgtgccctccaataaccaaccagacaattcttccctcgggc |
2790392 |
T |
|
| Q |
569 |
cttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcgagggtcgtgccatcttccattttctgcctctccaggactgctgttgctgct |
668 |
Q |
| |
|
|||||||||| |||||| | ||||||||||||||||||||||||| ||||| || |||||||||| ||| || | ||||| ||||||||||||||| |
|
|
| T |
2790391 |
cttcaaatccgacaattgcagtttcttcaatgaaaagggaagacaaccgaggatcatgccatcttctattgtccgtctctc---tactgctgttgctgct |
2790295 |
T |
|
| Q |
669 |
gcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttcttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgca |
768 |
Q |
| |
|
|||||| |||||| || | |||||||||||||||||||||||| ||||||| ||||||||| || ||| | ||| |||| || |||||| ||||| |
|
|
| T |
2790294 |
gcttgatgatcctggtgtctgtgaaatttgaaagttatacctctcacttctttccttgattccacgaattgatatcttaatgtttttaatctcagatgct |
2790195 |
T |
|
| Q |
769 |
attttgtgacggggaatcaaagttttgat |
797 |
Q |
| |
|
|| | ||| ||||||||||||||||||| |
|
|
| T |
2790194 |
atctgatgatggggaatcaaagttttgat |
2790166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 64 - 263
Target Start/End: Complemental strand, 3201473 - 3201274
Alignment:
| Q |
64 |
agttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaaaggatttcttgaaaaattctgcaacatgcatcattctagtagtga |
163 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| |||| |||||||||| ||||| |||||||| ||| |||| || ||||||||||||||| | || | |
|
|
| T |
3201473 |
agttcccacgctttgtttggaggcaaaggttgtaggtggtgaatatgaacaagaaaagatttcttaaaatattcagctacatgcatcattctactggtca |
3201374 |
T |
|
| Q |
164 |
ttatgatcctactacctttattgttattaggcatggcaaattcaatctggtcggaaaaatcttcttgccaaacatcatcaaagaatatcaagtacctctt |
263 |
Q |
| |
|
||||| ||||| ||||| | ||| || | |||| |||||||| || |||||| ||||| ||||||||||||||| || | |||||||||||| |
|
|
| T |
3201373 |
caatgattctacttcctttgtcattactaattaaggcatcttcaatctcatcagaaaaactttctttccaaacatcatcaaacaaaagcaagtacctctt |
3201274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 467 - 524
Target Start/End: Original strand, 22648533 - 22648590
Alignment:
| Q |
467 |
tggcaagagtggtttttcctagaccccccattcctaccactgatatgactgtgcgctc |
524 |
Q |
| |
|
|||||||||||||||||||||| || ||||| |||||||| || ||||| |||||||| |
|
|
| T |
22648533 |
tggcaagagtggtttttcctagccctcccatacctaccacagagatgacagtgcgctc |
22648590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0691 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: scaffold0691
Description:
Target: scaffold0691; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 19 - 767
Target Start/End: Original strand, 5716 - 6461
Alignment:
| Q |
19 |
ggacaatgcccaccaggttcaaatctaaatactttcttacagaagagttcccatgctttgtttggaggcaaaagttgcaggttgtgaatatgagttagaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||| ||||||| |||| || || |
|
|
| T |
5716 |
ggacaatgcccaccaggttcaaatctaaatacttttttgcagaagagttcccatactttgtttggaggcaagagttgcagtttgtgaacatgaactataa |
5815 |
T |
|
| Q |
119 |
aggatttcttgaaaaattctgcaacatgcatcattctagtagtgattatgatcctactacctttattgttattaggcatggcaaattcaatctggtcgga |
218 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |
|
|
| T |
5816 |
aggatttcttgaaaaattcggcaacaagcatcattcttgtggtgattataatcctactacctttattgttattaggcatggcaaattcaacctggtcaga |
5915 |
T |
|
| Q |
219 |
aaaatcttcttgccaaacatcatcaaagaatatcaagtacctcttatgttggaggtattgcctcacttcttcaatcagtgactggtcatcctttttgtgc |
318 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| | ||||| ||||||| ||||||| |
|
|
| T |
5916 |
aaaatcttcttgccatacatcatcaaagaatatcaaatacctcttatgttgcaggtattgcctcacttctataattaatgacttgtcatccattttgtgt |
6015 |
T |
|
| Q |
319 |
aacatctgtggaagagggtcttcagttccccgacaaaattgctccatcatgtttatcaacaaacctctcacagtgtatgattgagaaactgtgacgcaag |
418 |
Q |
| |
|
||||| || |||||||||||||||||| |||||||||||||||||||||||||||| | || |||||||| ||||||| ||||||||||| || ||||| |
|
|
| T |
6016 |
aacatttgcggaagagggtcttcagtttcccgacaaaattgctccatcatgtttatgagtaaccctctcacggtgtatgtttgagaaactgcgatgcaag |
6115 |
T |
|
| Q |
419 |
cataacaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgt |
518 |
Q |
| |
|
|| ||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| || || || |
|
|
| T |
6116 |
cacgacaatcaaattgtgttgttaccttttggctgtcaaaaactagcttggcaagagtggttttccctatacctcccattcctaccactgaaattacggt |
6215 |
T |
|
| Q |
519 |
gcgctcaactgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcga |
618 |
Q |
| |
|
||||||| ||| || |||||||||||||||||||| ||| |||||||||||||| |||||||||| ||| ||||||||||| ||||||| ||| | |||| |
|
|
| T |
6216 |
gcgctcagctggactctccaataaccaaccatataattcctctcttgggccttcgaatcctacaacttcagtttcttcaataaaaagggcagataatcga |
6315 |
T |
|
| Q |
619 |
gggtcgtgccatcttccattttctgcctctccaggactgctgttgctgctgcttgaggatccttgttcatttgaaatttgaaagttatacctctcgcttc |
718 |
Q |
| |
|
|| || ||||||||||||||||||||||||| | ||||| ||||| ||||| ||||| |||||| | ||||||||||||||||||| || |||| |
|
|
| T |
6316 |
ggatcacgccatcttccattttctgcctctcctg---tgctgctgctgacacttgatgatccaggttcatgtaaaatttgaaagttatacctttcacttc |
6412 |
T |
|
| Q |
719 |
ttttcttgattccgtgagttgtcagcttgatgtcttgaatctctgatgc |
767 |
Q |
| |
|
| | ||||||||| || ||| |||||| ||||| |||||||| ||||| |
|
|
| T |
6413 |
tgtccttgattccacgaattgacagctttatgtcctgaatctcagatgc |
6461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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