View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8908_low_16 (Length: 585)
Name: NF8908_low_16
Description: NF8908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8908_low_16 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 509; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 1 - 569
Target Start/End: Original strand, 1506118 - 1506686
Alignment:
| Q |
1 |
tagtaatatccctatcattgataatgattattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1506118 |
tagtaatatccctatcattgataatgattattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaa |
1506217 |
T |
 |
| Q |
101 |
aattaccaagttgtcattgaacatttaaagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1506218 |
aattaccaagttgtcattgaacatttaaagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcga |
1506317 |
T |
 |
| Q |
201 |
attcccctattaaactcttaagttcgctaaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1506318 |
attcccctattaaactcttaagttcgctaaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagt |
1506417 |
T |
 |
| Q |
301 |
gtggggctgcattttagaggtattcgatggtcttcctgttattgatcatgaattttatgaggagaagattttcagttacaaagatgaattgatgcaaata |
400 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || |
|
|
| T |
1506418 |
gtggggctgcattttagaggtgttcgatggtcttcctgttattgatcatgaattttatggggagaaaattttcagttacaaagatgaattgatgcaagta |
1506517 |
T |
 |
| Q |
401 |
ggggtgctggttgattttaaggatgccatcaaaaaatttgcaagtctctttcaacaaaaggcattggaaaattcagttgaccaacaacatgtcatctcat |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||| || ||| ||||||||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
1506518 |
ggggtgctggttgattttaaggatgccatcaaaaaaattgaaaggctatttgaacaaaaggcattggaaaattcaattaacggacaacatgtcatctcat |
1506617 |
T |
 |
| Q |
501 |
ttctctcttgttgcaggctgctgaagggaagtgactacagttttccttctgatttctcaaccatcatac |
569 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1506618 |
ttctctcttgttgcaggctgctgaaaggaactgactacagttttccttctgatttctcaaccatcatac |
1506686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 565
Target Start/End: Original strand, 3011806 - 3012370
Alignment:
| Q |
1 |
tagtaatatccctatcattgataatgattattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaa |
100 |
Q |
| |
|
|||| |||| ||| |||||||| ||| ||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||| | || | |
|
|
| T |
3011806 |
tagtgatattcctttcattgatcatgcttattttggtgaggaaatatataattacaaagaagagctcaagttgctaggagtgatagttgacttgaatgga |
3011905 |
T |
 |
| Q |
101 |
aattaccaagttgtcattgaacatttaaagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcga |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||| |||| ||| ||| |||||| | ||| |||||||||||||||||||| ||||||| | ||| || |
|
|
| T |
3011906 |
aattaccaagttgtcattgagcatttaaaaccactctcaaatttggcctctttgacagctgaggctgttcttttgataatggagtgcatcagacacttga |
3012005 |
T |
 |
| Q |
201 |
attcccctattaaactcttaagttcgctaaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagt |
300 |
Q |
| |
|
|| |||| ||||||||| | ||| |||| |||| | ||| ||| ||| |||||||||||||| ||||||| ||||||||||||||| |||||||| |
|
|
| T |
3012006 |
atgcccccgataaactcttgaattctttaaatggaacaggctgcttgaagaccaacatgggtttcaagacaccagctgaatgtttcttgtacgatccagt |
3012105 |
T |
 |
| Q |
301 |
gtggggctgcattttagaggtattcgatggtcttcctgttattgatcatgaattttatgaggagaagattttcagttacaaagatgaattgatgcaaata |
400 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||| | | ||||||||||| || ||||||||| ||| |||||| |
|
|
| T |
3012106 |
gtggggctgcattttggaggtattcaatggtctccctgttattgatcataaattttacgggcagaagattttctcttttaaagatgaactgaggcaaatc |
3012205 |
T |
 |
| Q |
401 |
ggggtgctggttgattttaaggatgccatcaaaaaatttgcaagtctctttcaacaaaaggcattggaaaattcagttgaccaacaacatgtcatctcat |
500 |
Q |
| |
|
|||||| ||||||||||| |||| |||||||||||||| ||||| ||| |||||||||||| ||| |||| || |||||||||||||||| |||| |
|
|
| T |
3012206 |
ggggtggtggttgattttggaaatgctatcaaaaaatttgctagtctgtttgaacaaaaggcatcagaagcttcaattaaccaacaacatgtcatgtcat |
3012305 |
T |
 |
| Q |
501 |
ttctctcttgttgcaggctgctgaagggaagtgactacagttttccttctgatttctcaaccatc |
565 |
Q |
| |
|
||||| |||||||||||||||| |||||| ||||| |||||||||||||| ||| |||||||| |
|
|
| T |
3012306 |
ttctcaattgttgcaggctgctggagggaaccgactatagttttccttctgaattcgcaaccatc |
3012370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 28 - 569
Target Start/End: Complemental strand, 2947584 - 2947043
Alignment:
| Q |
28 |
ttattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaaaattaccaagttgtcattgaacattta |
127 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| | |||||||| |
|
|
| T |
2947584 |
ttattgtggtgaggaaatatataactacaaagaggagcttaagttgctgggagtgatagttgatttaagtggaaattaccaagttgttacacaacattta |
2947485 |
T |
 |
| Q |
128 |
aagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcgaattcccctattaaactcttaagttcgc |
227 |
Q |
| |
|
|| ||||| |||| || ||| |||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||| |
|
|
| T |
2947484 |
aaatcaccctcaaatttagcctctttgacagctgaggctgttcttttgataatggaatgcatcaaatactcgaatgtccctattgaagtcttaaattcga |
2947385 |
T |
 |
| Q |
228 |
taaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagtgtggggctgcattttagaggtattcga |
327 |
Q |
| |
|
|||||||||| || || ||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||| |||||||| ||||||||| | |
|
|
| T |
2947384 |
taaagagaacaaggtgctttaagacaaacatgggtttcaaagcaccatgtgaatgtttcttgtacaatcaagtgtggggatgcattttggaggtattcaa |
2947285 |
T |
 |
| Q |
328 |
tggtcttcctgttattgatcatgaattttatgaggagaagattttcagttacaaagatgaattgatgcaaataggggtgctggttgattttaaggatgcc |
427 |
Q |
| |
|
|||| ||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |
|
|
| T |
2947284 |
tggtattcctattattgaccataaattttatggagagaagattttcagttacaaagatgaattaaagcaaataggggtgctggttgatttcaaggatgcc |
2947185 |
T |
 |
| Q |
428 |
atcaaaaaatttgcaagtctctttcaacaaaaggcattggaaaattcagttgaccaacaacatgtcatctcatttctctcttgttgcaggctgctgaagg |
527 |
Q |
| |
|
|| | ||||| ||||| || |||||||||||| |||| ||| || ||| | |||||| ||||||||||||||||||| |||| |||||||| |
|
|
| T |
2947184 |
gcaaatatttttgctagtctattcaaacaaaaggcatcagaaacctcaattaacccaacacatgttatctcatttctctcttgttacaggaagctgaagg |
2947085 |
T |
 |
| Q |
528 |
gaagtgactacagttttccttctgatttctcaaccatcatac |
569 |
Q |
| |
|
||| | ||| |||||||||||| |||| |||||||||||| |
|
|
| T |
2947084 |
gaactcgctattgttttccttctggtttcccaaccatcatac |
2947043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 1 - 504
Target Start/End: Complemental strand, 2930964 - 2930461
Alignment:
| Q |
1 |
tagtaatatccctatcattgataatgattattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaa |
100 |
Q |
| |
|
|||| |||||||| |||||||| || ||||| |||||| ||||| |||||||||||||||||||||||||||| |||||||||| |||||||| || | |
|
|
| T |
2930964 |
tagtgatatccctttcattgatcgtgcttattttggtgaacaaatatataattacaaagaggagctcaagttgctaggagtgatagttgacttaactgga |
2930865 |
T |
 |
| Q |
101 |
aattaccaagttgtcattgaacatttaaagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcga |
200 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| || |||| ||| | | ||||| | ||| |||||||||||||||||||||||||||| | ||| || |
|
|
| T |
2930864 |
aattaccaagtcgtcattgagcatttgaagtcgccttcaaatttggcttcattgaccgctgaggctgttcttttgataatggaatgcatcagacacttga |
2930765 |
T |
 |
| Q |
201 |
attcccctattaaactcttaagttcgctaaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagt |
300 |
Q |
| |
|
|| |||| ||||||||| | |||| ||| |||| | ||| ||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2930764 |
atgcccccgataaactcttgaattcgttaagtggaacaggctgcttgaagaccaacacgggtttcaaaacaccagctgaatgtttcttgtatgatccagt |
2930665 |
T |
 |
| Q |
301 |
gtggggctgcattttagaggtattcgatggtcttcctgttattgatcatgaattttatgaggagaagattttcagttacaaagatgaattgatgcaaata |
400 |
Q |
| |
|
||||||||||||| | ||||||||| || ||||||||||||||||||| | ||||||| || |||||||||| ||||||||| ||| ||| |||||| |
|
|
| T |
2930664 |
gtggggctgcattctggaggtattcattgatcttcctgttattgatcataacttttatggggcgaagattttctcttacaaagacgaactgaggcaaatc |
2930565 |
T |
 |
| Q |
401 |
ggggtgctggttgattttaaggatgccatcaaaaaatttgcaagtctctttcaacaaaaggcattggaaaattcagttgaccaacaacatgtcatctcat |
500 |
Q |
| |
|
|||||| ||||||||| | |||| || ||||| ||| ||||||||||| ||| |||||||||||||| |||| || ||||| ||||||| ||||||| |
|
|
| T |
2930564 |
ggggtggtggttgattatggaaatgctataaaaaagttttcaagtctctttgaacgaaaggcattggaaacttcaattaaccaaaaacatgttatctcat |
2930465 |
T |
 |
| Q |
501 |
ttct |
504 |
Q |
| |
|
|||| |
|
|
| T |
2930464 |
ttct |
2930461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 28 - 569
Target Start/End: Complemental strand, 2921560 - 2921018
Alignment:
| Q |
28 |
ttattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaaaattaccaagttgtc-attgaacattt |
126 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| || |||| || |||||||||| |||| || || ||||| |
|
|
| T |
2921560 |
ttattatggtgaagaaatttataattacaaagaggagctcaagttgctaggagtgatagttggcttatctggaaattaccaaattgtttatcgagcattt |
2921461 |
T |
 |
| Q |
127 |
aaagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcgaattcccctattaaactcttaagttcg |
226 |
Q |
| |
|
||| ||| |||| ||| ||| |||||| | || ||||||||||||||| || | |||||| || | |||| | |||| |||||| |||||||| |
|
|
| T |
2921460 |
aaaatcatgctcaaatttggcctctttgacagccgaggctgttcttttgatattgcagtgcatccgattattgaatgcacctagtaaactgttaagttca |
2921361 |
T |
 |
| Q |
227 |
ctaaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagtgtggggctgcattttagaggtattcg |
326 |
Q |
| |
|
|| || |||| ||| ||| |||||| ||||||||| ||| |||| ||||||||| | ||||||| | | |||||| |||||||| | |||||| |
|
|
| T |
2921360 |
ctgaatggaacatgctgcttgaagacaaatatgggtttccaaataccaagtgaatgttacctgtatgaccaggagtggggatgcattttgtatgtattca |
2921261 |
T |
 |
| Q |
327 |
atggtcttcctgttattgatcatgaattttatgaggagaagattttcagttacaaagatgaattgatgcaaataggggtgctggttgattttaaggatgc |
426 |
Q |
| |
|
||| |||||||| ||||| ||| ||||||||| |||||||||||| ||||||||||||| ||| | ||||||| | | ||||||||||| ||||| |
|
|
| T |
2921260 |
atgaccttcctgtgattgaccataaattttatggagagaagattttcgattacaaagatgaactgaggaaaataggtgcggtggttgattttggagatgc |
2921161 |
T |
 |
| Q |
427 |
catcaaaaaatttgcaagtctctttcaacaaaaggcattggaaaattcagttgaccaacaacatgtcatctcatttctctcttgttgcaggctgctgaag |
526 |
Q |
| |
|
|||||||||||||| |||||| |||| ||||||| || ||| || ||||||| ||||| || ||||||||||||||| | ||||||||||| |
|
|
| T |
2921160 |
tatcaaaaaatttgcttctctcttcaaacagaaggcatcacaatcctcatttaaccaacatcatgttatgtcatttctctcttgtcggaggctgctgaaa |
2921061 |
T |
 |
| Q |
527 |
ggaagtgactacagttttccttctgatttctcaaccatcatac |
569 |
Q |
| |
|
|||| || || | |||||||| ||||||||||||||||||| |
|
|
| T |
2921060 |
ggaactgcatataaatttccttccgatttctcaaccatcatac |
2921018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 569
Target Start/End: Complemental strand, 37796465 - 37795900
Alignment:
| Q |
1 |
tagtaatatccctatcattgataatgattattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaa |
100 |
Q |
| |
|
||||||||||||| | |||||| | | ||| | ||||||||||||| ||| |||||||||||||| |||||| |||||||| ||| || ||| | | | |
|
|
| T |
37796465 |
tagtaatatcccttttattgatcaagcttactttggtgaggaaatatatagctacaaagaggagctgaagttgttgggagtggtagttggctttaataga |
37796366 |
T |
 |
| Q |
101 |
aattaccaagttgtcattgaacatttaaagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcga |
200 |
Q |
| |
|
||||||||| |||| || | || ||| ||||| |||| ||| ||| |||||| | ||| |||||||||||||||||| |||||||||||| || | |
|
|
| T |
37796365 |
aattaccaaattgttatcaagcactta---tcaccctcaaatttggcctctttgacagctgaggctgttcttttgataatgcaatgcatcaaattcttgg |
37796269 |
T |
 |
| Q |
201 |
attcccctattaaactcttaagttcgctaaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccag- |
299 |
Q |
| |
|
|| ||||| |||| |||||||||| | || |||| || ||| |||||||||||| ||||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
37796268 |
atgaccctagtaaaatcttaagttcattgaaaggaacaagatgcttgaagacaaacatgggcttcaaaataccaagtgaatgtttcttgtatga-ccaga |
37796170 |
T |
 |
| Q |
300 |
tgtggggctgcattttagaggtattcgatggtcttcctgttattgatcatgaattttatgaggagaagattttcagttacaaagatgaattgatgcaaat |
399 |
Q |
| |
|
||||||||||||||| || |||||| ||| |||||||| ||||||||| |||| |||| || || |||||| ||||||| ||||| ||| |||| |
|
|
| T |
37796169 |
cgtggggctgcattttggatgtattcaatgcccttcctgtgattgatcataaattctatggagataatattttctcttacaaaaatgaactgaaaaaaat |
37796070 |
T |
 |
| Q |
400 |
aggggtgctggttgattttaaggatgccatcaaaaaatttgcaagtctctttcaacaaaaggcattggaaaattcagttgaccaacaacatgtcatctca |
499 |
Q |
| |
|
|| || | ||||||||| ||||| ||||| | |||||| |||||| |||| ||||||| || |||| || | ||| || ||||||| ||| |
|
|
| T |
37796069 |
cggtgtagttgttgattttggagatgctatcaacatatttgcttctctcttcaaacagaaggcatcccaagcttcatttaatcaagaaaatgtcatgtca |
37795970 |
T |
 |
| Q |
500 |
tttctctcttgttgcaggctgctgaagggaagtgactacagttttccttctgatttctcaaccatcatac |
569 |
Q |
| |
|
||||| || ||||| || ||||||||||| | || || || |||||||||||||| || ||||| |||| |
|
|
| T |
37795969 |
tttctttcatgttgtagactgctgaaggggactgtttatagatttccttctgatttttctaccattatac |
37795900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 28 - 569
Target Start/End: Complemental strand, 28025436 - 28024895
Alignment:
| Q |
28 |
ttattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaaaattaccaagttgtcattgaacattta |
127 |
Q |
| |
|
||||| ||| ||||||||| || | |||||||||||||| |||||| |||||||||||| || | |||||| |||||||||| |||| || || |||||| |
|
|
| T |
28025436 |
ttattttggcgaggaaatatatgactacaaagaggagctgaagttgttgggagtgatagttggcataagtggaaattaccaaattgttatcgagcattta |
28025337 |
T |
 |
| Q |
128 |
aagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcgaattcccctattaaactcttaagttcgc |
227 |
Q |
| |
|
|| ||||| ||| ||| ||| |||||| | ||| ||||||||| || | ||| |||||||||||| | | || ||||| | || |||||||||| |
|
|
| T |
28025336 |
aaatcaccctcatatttggcctctttgaccgctgaggctgttcttctgctgatgaaatgcatcaaattcatggatgaccctagtgaagtcttaagttcat |
28025237 |
T |
 |
| Q |
228 |
taaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagtgtggggctgcattttagaggtattcga |
327 |
Q |
| |
|
| ||| |||| ||| ||| |||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||| || |||||| | |
|
|
| T |
28025236 |
tgaagggaacaagctgcttgaagacaaacatgggtttcaaaataccaagtgaatgtttcttgtatgaccaggtgtggggctgcatttttgatgtattcaa |
28025137 |
T |
 |
| Q |
328 |
tggtcttcctgttattgatcatgaattttatgaggagaagattttcagttacaaagatgaattgatgcaaataggggtgctggttgattttaaggatgcc |
427 |
Q |
| |
|
||| |||||||| ||||||||| |||| |||| || || |||||| ||||||| ||||| ||| |||||| || ||| ||||||||||| | ||||| |
|
|
| T |
28025136 |
tggccttcctgtgattgatcataaattctatggagataatattttctcttacaaaaatgaactgaagcaaatcggtgtggtggttgattttgaagatgct |
28025037 |
T |
 |
| Q |
428 |
atcaaaaaatttgcaagtctctttcaacaaaaggcattggaaaattcagttgaccaacaacatgtcatctcatttctctcttgttgcaggctgctgaagg |
527 |
Q |
| |
|
|| ||||||||||| |||||| |||| || |||| ||| |||| || ||| || ||||||| |||||||| ||||||||||| | |||| ||| |
|
|
| T |
28025036 |
ataaaaaaatttgcttctctcttcaaacagaaagcatcacaaacttcatttactcaagaaaatgtcatgtcatttctttcttgttgcagacagctggagg |
28024937 |
T |
 |
| Q |
528 |
gaagtgactacagttttccttctgatttctcaaccatcatac |
569 |
Q |
| |
|
||| || || || ||||||||||||||||||| ||| |||| |
|
|
| T |
28024936 |
gaactgtttatagatttccttctgatttctcaagcattatac |
28024895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 113; Significance: 6e-57; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 4915866 - 4916190
Alignment:
| Q |
1 |
tagtaatatccctatcattgataatgattattatggtgaggaaatacataattacaaagaggagctcaagttgctgggagtgatagctgacttaagtgaa |
100 |
Q |
| |
|
|||| |||| ||| |||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||| | |||||||||| |||||| | || | |
|
|
| T |
4915866 |
tagtgatatacctttcattgatcatgattatttcggtgaggaaatatataattacaaagtggagctcaagttgttaggagtgatagttgacttcaatgga |
4915965 |
T |
 |
| Q |
101 |
aattaccaagttgtcattgaacatttaaagtcaccatcaagattgtcctgtttgacggttgaagctgttcttttgataatggaatgcatcaaatactcga |
200 |
Q |
| |
|
||||||||||||||||| || |||||||| || |||| ||| | | |||||||| ||| ||| |||||||||||||||||||||||||| | || | |
|
|
| T |
4915966 |
aattaccaagttgtcatagagcatttaaaactgccctcaaatttggcttctttgacggctgaggctattcttttgataatggaatgcatcaaacattcaa |
4916065 |
T |
 |
| Q |
201 |
attcccctattaaactcttaagttcgctaaagagaacggactgtttgtggacaaacatgggtttcaaaacaccaggtgaatgtttcttgtatgatccagt |
300 |
Q |
| |
|
|| ||||||| || |||||| || ||||| | |||| | ||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
4916066 |
atgtccctattgaagtcttaaatttgctaaggggaacaagtttcttgaagacaaacatcggtttcaaaacgccaagtgaatgtttcttgtatgatccagt |
4916165 |
T |
 |
| Q |
301 |
gtggggctgcattttagaggtattc |
325 |
Q |
| |
|
||||||||||||||| || |||||| |
|
|
| T |
4916166 |
gtggggctgcattttggaagtattc |
4916190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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