View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8908_low_3 (Length: 1327)
Name: NF8908_low_3
Description: NF8908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8908_low_3 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-152; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-152
Query Start/End: Original strand, 1011 - 1308
Target Start/End: Original strand, 7654820 - 7655116
Alignment:
| Q |
1011 |
gtagtcgctaaataaatgcattgttcaaaatttgttcccattatgtaaaaaataaaacttcaagagtttagtctaatgttaagaaaactgatcttttatt |
1110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||| |
|
|
| T |
7654820 |
gtagtcgctaaataaatgcattgttcaaaatttgttcccattatgtaaaaaataaaacttcta-agtttagtctaatgttaagaaaactgatcatatatt |
7654918 |
T |
 |
| Q |
1111 |
caaaagtttgggatgcaaactccgtttttactttactcttgaaagtacatacgtaaatccctttataaataaatattctttaaacttttatatcattaga |
1210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7654919 |
caaaagtttgggatgcaaactccgtttttactttactcttgaaagtacataggtaaatccctttataaataaatattctttaaacttttatatcattaga |
7655018 |
T |
 |
| Q |
1211 |
aaaatgaaagtctacgatcacaactatatatatgttgatccaagcctcaacctatgtaatacaacttaaaacaacatgggtgcattccaagtactctc |
1308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7655019 |
aaaatgaaagtctacgatcacaactatatatatgttgatccaagcctcaacctatgtaatacaacttaaaacaacatgggtgcattccaagtactctc |
7655116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 684 - 1013
Target Start/End: Original strand, 7654190 - 7654519
Alignment:
| Q |
684 |
gagtatgagagggatagttgtttacacgttattataaaatagatgttcaaatatcatttatcgcttatataagacgctttttattatgttgtttatgtct |
783 |
Q |
| |
|
||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7654190 |
gagtatgagagagatagttgtttacaagttgttataaaatagatgttcaaatatcatttctcgcttatataagacgctttttattatgttgtttatgtca |
7654289 |
T |
 |
| Q |
784 |
tacatgaatttgttcgtcttgagcatagatatgatttttaatcaattttgttgtnnnnnnnngtgatgaattggattgttaatgtcaacaaaaaggaaaa |
883 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7654290 |
tgcatgaatttgttcgtcttgaacatagatatgatttttaattaattttgttgtaaaaaaaagtgatgaattggattgttaatgtcaacaaaaaggaaaa |
7654389 |
T |
 |
| Q |
884 |
cagtatatagtcgctcaatgatattgttcaaatgtcaacgttttttatttgacaataatgtcaagattttaataattcaaatgtcaaatatttctccata |
983 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7654390 |
cagtatatagtcgctcaatgatattattcaaatgtcaacgttttttatttgacaataatgtcaagattttaataattcaaatgtcaaatatttctccata |
7654489 |
T |
 |
| Q |
984 |
aaaaatgtcaaatgtgtaccaatatatgta |
1013 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |
|
|
| T |
7654490 |
aaaaatgtcaaatgtgtaccgatatatgta |
7654519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 55 - 296
Target Start/End: Original strand, 7653562 - 7653803
Alignment:
| Q |
55 |
gatggtgtttcacggtggtttggggtctgagtttgggtttcacggtggtggtttggggattgggtttcgattgagaatggaggtaaagggagaacagttg |
154 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7653562 |
gatggtgtttcacggtggtttggggtctgagtttgggtttcacggtggtggtttggggattgtgtttcgattgagaatggaggaaaagggagaacagttg |
7653661 |
T |
 |
| Q |
155 |
ggttttgattgggttcgattgagaaggattgggttttgattgggtttggtggagttcgattggattttcatggtggtttggtgttcgattgagaacagta |
254 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| | |
|
|
| T |
7653662 |
ggttttgattgggttcgattgagaaggattgggttttgattgggtttggtggagttcgattgggttttcaaggtggtttggtgttcgattgagaacaatg |
7653761 |
T |
 |
| Q |
255 |
gtttgtctgggatttggtgttcgatggtggtgtttcacgagt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7653762 |
gtttgtctgggatttggtgttcgatggtggtgtttcatgagt |
7653803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 352 - 624
Target Start/End: Original strand, 7653859 - 7654130
Alignment:
| Q |
352 |
tgtgaacattttttaggaggggcacttggcgctttacatttggtttggaactttgaattttgataaatagtttttaaatggggtaaaacaatttaatacc |
451 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7653859 |
tgtgaacattttttaggaggggcacttggcgctttacatttggtttggaactttgaattttgataaatagtttttaaatgggataaaacaatttaatacc |
7653958 |
T |
 |
| Q |
452 |
attagaagttaaaaactttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcctagannnnnnnnnnnnnaaggaaaaatccta |
551 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7653959 |
attagaagttaaaaactttccttacacccagctttttaaatcatttggataacaacccatttaaaatcctaga-tttttttttttgaaggaaaaatccta |
7654057 |
T |
 |
| Q |
552 |
gatttaataagtgttttttgtactagtgctatgcacacacctgatgacatggttggtggcagaatccgaagga |
624 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
7654058 |
gatttaataagtattttttgtactagtgctatgcacacacctgatgacacggctggtggcagaatccgaagga |
7654130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 360 - 521
Target Start/End: Original strand, 9110228 - 9110390
Alignment:
| Q |
360 |
ttttttaggaggggcacttggcgctttacatttggtttggaa-ctttgaattttgataaatagtttttaaatggggtaaaacaatttaataccattagaa |
458 |
Q |
| |
|
||||||||||||| ||||||||||||| || |||||||| || ||||||||||||| |||||||||||||||||||| || |||||||| ||||| || |
|
|
| T |
9110228 |
ttttttaggagggacacttggcgctttgcacttggtttgaaaactttgaattttgacaaatagtttttaaatggggtcaactgatttaatatcattacaa |
9110327 |
T |
 |
| Q |
459 |
gttaaaaactttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcct |
521 |
Q |
| |
|
|||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
9110328 |
gttaaaaactttccctgcacccagctttttaagtcatgtggatagcaacccatttaaaatcct |
9110390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 480 - 521
Target Start/End: Original strand, 17394645 - 17394686
Alignment:
| Q |
480 |
caactttttaaatcatgtggataacaacccatttaaaatcct |
521 |
Q |
| |
|
||||||||||| ||||||||||| ||||||| |||||||||| |
|
|
| T |
17394645 |
caactttttaagtcatgtggatatcaacccacttaaaatcct |
17394686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 712 - 745
Target Start/End: Original strand, 30170251 - 30170284
Alignment:
| Q |
712 |
ttattataaaatagatgttcaaatatcatttatc |
745 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
30170251 |
ttattataaaatagatgttgaaatatcatttatc |
30170284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 125; Significance: 1e-63; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 1e-63
Query Start/End: Original strand, 360 - 524
Target Start/End: Original strand, 40647078 - 40647242
Alignment:
| Q |
360 |
ttttttaggaggggcacttggcgctttacatttggtttggaactttgaattttgataaatagtttttaaatggggtaaaacaatttaataccattagaag |
459 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
40647078 |
ttttttaggaggggcacttggcgctttacatttggtttggaactttgaattttgataaatagtttttaaatggggtgaaacaatttaatatcattagaag |
40647177 |
T |
 |
| Q |
460 |
ttaaaaactttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcctaga |
524 |
Q |
| |
|
||||||| || | | ||||||| |||||||| ||||||||||| |||| |||||||||||||||| |
|
|
| T |
40647178 |
ttaaaaatttccattacacccagctttttaagtcatgtggatagcaactcatttaaaatcctaga |
40647242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 11362436 - 11362343
Alignment:
| Q |
55 |
gatggtgtttcacggtggtttggggtctgagtttgggtttcacggtggtggtttggggattgggtttcgattgagaatggaggtaaagggagaac |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
11362436 |
gatggtgtttcacggtggtttggggtctgactttgggtttcacggtggtggttt-aggattgggttacgattgaaaatggaggaaaagggagaac |
11362343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 453 - 524
Target Start/End: Complemental strand, 11362102 - 11362031
Alignment:
| Q |
453 |
ttagaagttaaaaactttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcctaga |
524 |
Q |
| |
|
|||| ||||||||||||||| ||||||| | |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
11362102 |
ttaggagttaaaaactttccctacacccagcattttaagtcaggtggataacaacccatttaaaatcctaga |
11362031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 543 - 579
Target Start/End: Original strand, 40647232 - 40647268
Alignment:
| Q |
543 |
aaaatcctagatttaataagtgttttttgtactagtg |
579 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40647232 |
aaaatcctagatttaataagtgttttttgtactagtg |
40647268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 469 - 524
Target Start/End: Complemental strand, 45849673 - 45849618
Alignment:
| Q |
469 |
ttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcctaga |
524 |
Q |
| |
|
||||| ||||||| |||||||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
45849673 |
ttccttacacccagctttttaagtcgtgtggatagcaacccatttaaaatcctaga |
45849618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 543 - 581
Target Start/End: Complemental strand, 45849628 - 45849590
Alignment:
| Q |
543 |
aaaatcctagatttaataagtgttttttgtactagtgct |
581 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
45849628 |
aaaatcctagatttaataagtgttttttgtactaatgct |
45849590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 543 - 579
Target Start/End: Complemental strand, 11362041 - 11362005
Alignment:
| Q |
543 |
aaaatcctagatttaataagtgttttttgtactagtg |
579 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11362041 |
aaaatcctagatgtaataagtgttttttgtactagtg |
11362005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 8e-46; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 360 - 521
Target Start/End: Original strand, 7863938 - 7864100
Alignment:
| Q |
360 |
ttttttaggaggggcacttggcgctttacatttggtttggaa-ctttgaattttgataaatagtttttaaatggggtaaaacaatttaataccattagaa |
458 |
Q |
| |
|
||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||| ||||| |||| ||||||||| |||| |||||||| ||||| || |
|
|
| T |
7863938 |
ttttttaggagggacacttggccctttacacttggtttggaaactttgaattttgacaaatacttttaaaatggggtcaaacgatttaatatcattacaa |
7864037 |
T |
 |
| Q |
459 |
gttaaaaactttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcct |
521 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
7864038 |
gttaaaaactttccttgcacccagctttttaagtcatgtggatagcaacccatttaaaatcct |
7864100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 4059388 - 4059295
Alignment:
| Q |
55 |
gatggtgtttcacggtggtttggggtctgagtttgggtttcacggtggtggtttggggattgggtttcgattgagaatggaggtaaagggagaac |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||| |
|
|
| T |
4059388 |
gatggtgtttcacggtggtttggggtctgactttgggtttcacggtggtggttt-gggattgggttatgattgaaaatggaggaaaagggagaac |
4059295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 453 - 524
Target Start/End: Complemental strand, 4059092 - 4059021
Alignment:
| Q |
453 |
ttagaagttaaaaactttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcctaga |
524 |
Q |
| |
|
|||| |||||||||||||||| ||||||| | |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
4059092 |
ttaggagttaaaaactttccttacacccagcattttaagtcaggtggataacaacccatttaaaatcctaga |
4059021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 543 - 579
Target Start/End: Complemental strand, 4059031 - 4058995
Alignment:
| Q |
543 |
aaaatcctagatttaataagtgttttttgtactagtg |
579 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4059031 |
aaaatcctagatgtaataagtgttttttgtactagtg |
4058995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 94; Significance: 3e-45; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 360 - 481
Target Start/End: Complemental strand, 22620305 - 22620184
Alignment:
| Q |
360 |
ttttttaggaggggcacttggcgctttacatttggtttggaactttgaattttgataaatagtttttaaatggggtaaaacaatttaataccattagaag |
459 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | ||||||||||||| ||||||||| |
|
|
| T |
22620305 |
ttttttaggaggggcacttggcgctttacatttggtttggaactttaaattttaataaatagtttttaaatgggatgaaacaatttaatatcattagaag |
22620206 |
T |
 |
| Q |
460 |
ttaaaaactttcctgacaccca |
481 |
Q |
| |
|
||||||||||| || ||||||| |
|
|
| T |
22620205 |
ttaaaaacttttcttacaccca |
22620184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 21905454 - 21905544
Alignment:
| Q |
58 |
ggtgtttcacggtggtttggggtctgagtttgggtttcacggtggtggtttggggattgggtttcgattgagaatggaggtaaagggagaac |
149 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||| | ||| ||||||| |
|
|
| T |
21905454 |
ggtgtttcacggtggtttggggtctgaatttgggtttcacggtggtggttt-gggattgggttgcgattgaaaatggacgaaaaaggagaac |
21905544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 451 - 524
Target Start/End: Original strand, 21905807 - 21905880
Alignment:
| Q |
451 |
cattagaagttaaaaactttcctgacacccaactttttaaatcatgtggataacaacccatttaaaatcctaga |
524 |
Q |
| |
|
|||||||||||||||| |||||| ||||| |||||||||| ||||||||||| || |||||||||||||||||| |
|
|
| T |
21905807 |
cattagaagttaaaaattttccttacacctaactttttaagtcatgtggatagcatcccatttaaaatcctaga |
21905880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 543 - 579
Target Start/End: Original strand, 21905870 - 21905906
Alignment:
| Q |
543 |
aaaatcctagatttaataagtgttttttgtactagtg |
579 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21905870 |
aaaatcctagatttaataagtgttttttgtactagtg |
21905906 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 90; Significance: 8e-43; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 90; E-Value: 8e-43
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 20592617 - 20592730
Alignment:
| Q |
45 |
agtgtttcatgatggtgtttcacggtggtttggggtctgagtttgggtttcacggtggtggtttggggattgggtttcgattgagaatggaggtaaaggg |
144 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20592617 |
agtgtttcacgatggtgtttcacggtggtttggggtctgagcttgggtttcacagtggtggtttggggattgggtttcgattgagaatggaggaaaaggg |
20592716 |
T |
 |
| Q |
145 |
agaacagttgggtt |
158 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
20592717 |
agaacgattgggtt |
20592730 |
T |
 |
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Target: chr3; HSP #2
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 20592984 - 20593099
Alignment:
| Q |
409 |
ttttgataaatagtttttaaatggggtaaaacaatttaataccattagaagttaaaaactttcctgacacccaactttttaaatcatgtggataacaacc |
508 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||| |||||||| ||||||||||| ||| | |
|
|
| T |
20592984 |
ttttgataaatagtttttaaatggggtgaaacaatttaatatcattagtagttaaaaactttccttacacccagctttttaagtcatgtggatagcaagc |
20593083 |
T |
 |
| Q |
509 |
catttaaaatcctaga |
524 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
20593084 |
catttaaaatcctaga |
20593099 |
T |
 |
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Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 543 - 579
Target Start/End: Original strand, 20593089 - 20593125
Alignment:
| Q |
543 |
aaaatcctagatttaataagtgttttttgtactagtg |
579 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20593089 |
aaaatcctagatttaataagtgttttttgtactagtg |
20593125 |
T |
 |
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Target: chr1 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 684 - 745
Target Start/End: Original strand, 34395929 - 34395990
Alignment:
| Q |
684 |
gagtatgagagggatagttgtttacacgttattataaaatagatgttcaaatatcatttatc |
745 |
Q |
| |
|
||||||||||| || ||||||| | | ||| | ||||||||||||| ||||||||||||||| |
|
|
| T |
34395929 |
gagtatgagagagaaagttgttcaaaagttgtcataaaatagatgtacaaatatcatttatc |
34395990 |
T |
 |
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