View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8908_low_72 (Length: 407)
Name: NF8908_low_72
Description: NF8908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8908_low_72 |
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Alignment Details
Target: chr7 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 35855525 - 35855906
Alignment:
| Q |
1 |
tgggggaatctgaaaccagaatggaaactttgtgggaatggaaaattacaatctccaattgatatcctaaacaaaagggtgcaagaacttcctcaacttg |
100 |
Q |
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| T |
35855525 |
tgggggaatctgaaaccagaatggaaactttgtgggaatggaaaattacaatctccaattgatatcctaaacaaaagggtgcaagaacttcctcaacttg |
35855624 |
T |
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| Q |
101 |
gtaaacttgaaaaagattacaaactaggtcctgctttcctaaagaataggtttaatgatgtcatggtaagccactaagtgcatttttaattaaacaatta |
200 |
Q |
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| T |
35855625 |
gtaaacttgaaaaagattacaaactaggtcctgctttcctaaagaataggtttaatgatgtcatggtaagccactaagtgcatttttaattaaacaatta |
35855724 |
T |
|
| Q |
201 |
taaatacacattttgcttaaggagactaatatacgtacgtacttaatgtttcgacagctccaatggaaaggttatgcaggtaagcttaatctaaatggaa |
300 |
Q |
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| T |
35855725 |
taaatacacattttgcttaaggagactaata----tacgtgcttaatgtttcgacagctccaatggaaaggttatgcaggtaagcttaatctaaatggaa |
35855820 |
T |
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| Q |
301 |
cttactacaaactaatacaatgtcattggcatacaccttcagagcacacattgaatggatcaaagtgagtataagttcttaagata |
386 |
Q |
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| T |
35855821 |
cttactacaaactaatacaatgtcattggcatacaccttcagagcacacattgaatggatcaaagtgggtataagttcttaagata |
35855906 |
T |
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