View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8909_low_45 (Length: 266)

Name: NF8909_low_45
Description: NF8909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8909_low_45
NF8909_low_45
[»] chr4 (37 HSPs)
chr4 (1-163)||(14683800-14683962)
chr4 (1-164)||(19635368-19635531)
chr4 (1-165)||(17091766-17091930)
chr4 (1-164)||(14300596-14300759)
chr4 (1-164)||(40476272-40476435)
chr4 (1-165)||(8389643-8389807)
chr4 (1-165)||(12479831-12479995)
chr4 (1-164)||(27714568-27714731)
chr4 (1-165)||(19775410-19775574)
chr4 (1-165)||(23958978-23959142)
chr4 (7-161)||(13513585-13513742)
chr4 (4-165)||(16233612-16233773)
chr4 (1-165)||(8050240-8050404)
chr4 (7-161)||(18604439-18604596)
chr4 (7-147)||(18224093-18224236)
chr4 (187-255)||(8389105-8389173)
chr4 (187-255)||(12479293-12479361)
chr4 (187-255)||(16234243-16234311)
chr4 (187-255)||(17092400-17092468)
chr4 (187-255)||(23958440-23958508)
chr4 (187-255)||(27714029-27714097)
chr4 (187-255)||(8050874-8050942)
chr4 (187-255)||(14301230-14301298)
chr4 (187-255)||(19634829-19634897)
chr4 (187-255)||(19776044-19776112)
chr4 (187-255)||(40475733-40475801)
chr4 (187-255)||(16352781-16352849)
chr4 (187-255)||(18224697-18224765)
chr4 (93-163)||(16250559-16250629)
chr4 (187-255)||(14683260-14683328)
chr4 (7-96)||(16248296-16248388)
chr4 (187-255)||(15145143-15145212)
chr4 (187-255)||(16251101-16251169)
chr4 (187-255)||(22632393-22632461)
chr4 (7-42)||(16350362-16350397)
chr4 (201-255)||(14188199-14188253)
chr4 (187-255)||(16286-16354)
[»] chr3 (62 HSPs)
chr3 (1-163)||(24186042-24186204)
chr3 (1-165)||(10008450-10008614)
chr3 (1-165)||(15345361-15345525)
chr3 (1-165)||(20059170-20059334)
chr3 (1-158)||(5110525-5110682)
chr3 (1-165)||(10909060-10909224)
chr3 (1-165)||(12889559-12889723)
chr3 (1-165)||(43165525-43165689)
chr3 (1-165)||(48428297-48428461)
chr3 (1-164)||(15399634-15399797)
chr3 (1-164)||(16638624-16638787)
chr3 (1-164)||(15713172-15713335)
chr3 (1-164)||(26790529-26790692)
chr3 (4-165)||(16753820-16753981)
chr3 (1-165)||(6603585-6603749)
chr3 (1-165)||(13255540-13255704)
chr3 (1-165)||(5422046-5422210)
chr3 (1-165)||(53382134-53382298)
chr3 (7-161)||(16804066-16804223)
chr3 (1-165)||(15586508-15586672)
chr3 (1-155)||(3688803-3688957)
chr3 (7-161)||(23414909-23415066)
chr3 (7-161)||(16695018-16695175)
chr3 (7-160)||(11861208-11861364)
chr3 (1-89)||(6596981-6597069)
chr3 (187-255)||(3688255-3688323)
chr3 (1-160)||(12501788-12501950)
chr3 (187-255)||(5422680-5422748)
chr3 (187-255)||(10908522-10908590)
chr3 (187-255)||(12889021-12889089)
chr3 (187-255)||(13255002-13255070)
chr3 (187-255)||(15587142-15587210)
chr3 (187-255)||(16638085-16638153)
chr3 (187-255)||(16754451-16754519)
chr3 (187-255)||(20059804-20059872)
chr3 (187-255)||(26791163-26791231)
chr3 (187-255)||(43164987-43165055)
chr3 (187-255)||(48427759-48427827)
chr3 (192-255)||(15400272-15400335)
chr3 (1-75)||(15358992-15359066)
chr3 (187-255)||(6603048-6603116)
chr3 (187-255)||(10007912-10007980)
chr3 (187-255)||(15345995-15346063)
chr3 (187-255)||(15358395-15358463)
chr3 (187-255)||(15713806-15713874)
chr3 (187-255)||(16804697-16804765)
chr3 (187-255)||(16694476-16694544)
chr3 (187-255)||(53382768-53382836)
chr3 (7-141)||(15065945-15066082)
chr3 (187-241)||(26191066-26191120)
chr3 (187-255)||(24185502-24185570)
chr3 (109-165)||(15358933-15358989)
chr3 (187-255)||(14874318-14874386)
chr3 (1-100)||(17497606-17497708)
chr3 (187-255)||(18437452-18437520)
chr3 (187-238)||(15065400-15065451)
chr3 (1-98)||(23079130-23079230)
chr3 (1-105)||(14873698-14873805)
chr3 (189-255)||(15261942-15262008)
chr3 (187-255)||(17492163-17492231)
chr3 (187-229)||(14579158-14579200)
chr3 (46-162)||(10408831-10408947)
[»] scaffold0109 (4 HSPs)
scaffold0109 (7-164)||(41416-41573)
scaffold0109 (7-163)||(13007-13166)
scaffold0109 (187-255)||(40877-40945)
scaffold0109 (187-255)||(13638-13706)
[»] scaffold0789 (1 HSPs)
scaffold0789 (1-164)||(199-362)
[»] scaffold0259 (2 HSPs)
scaffold0259 (1-163)||(8520-8682)
scaffold0259 (187-255)||(7980-8048)
[»] chr7 (36 HSPs)
chr7 (1-163)||(12690723-12690885)
chr7 (1-163)||(14957730-14957892)
chr7 (1-163)||(11549988-11550150)
chr7 (1-164)||(13689262-13689425)
chr7 (1-164)||(15157943-15158106)
chr7 (1-165)||(8710825-8710989)
chr7 (1-164)||(11234099-11234262)
chr7 (1-164)||(18180964-18181127)
chr7 (1-165)||(14335616-14335780)
chr7 (1-165)||(10873681-10873845)
chr7 (1-165)||(44788237-44788401)
chr7 (7-161)||(9591588-9591745)
chr7 (1-164)||(18587057-18587220)
chr7 (7-163)||(11984214-11984373)
chr7 (7-163)||(16726330-16726489)
chr7 (7-163)||(17703344-17703503)
chr7 (187-255)||(10873372-10873440)
chr7 (187-255)||(8200730-8200798)
chr7 (187-255)||(8710287-8710355)
chr7 (187-255)||(11234733-11234801)
chr7 (187-255)||(14335078-14335146)
chr7 (187-255)||(18587691-18587759)
chr7 (187-255)||(44788871-44788939)
chr7 (187-255)||(13688723-13688791)
chr7 (187-255)||(14149956-14150024)
chr7 (187-255)||(15158577-15158645)
chr7 (187-255)||(9591050-9591118)
chr7 (187-255)||(11550622-11550690)
chr7 (187-255)||(14957236-14957304)
chr7 (187-255)||(16726903-16726971)
chr7 (187-255)||(17703975-17704043)
chr7 (198-247)||(15146415-15146464)
chr7 (187-255)||(18180427-18180493)
chr7 (193-255)||(12690184-12690246)
chr7 (46-162)||(26115499-26115615)
chr7 (46-162)||(49155525-49155641)
[»] chr6 (38 HSPs)
chr6 (7-163)||(22829414-22829570)
chr6 (1-165)||(29589461-29589625)
chr6 (1-163)||(5836250-5836412)
chr6 (1-158)||(2871824-2871981)
chr6 (7-164)||(25115648-25115805)
chr6 (1-158)||(28260219-28260376)
chr6 (1-158)||(28285540-28285697)
chr6 (1-158)||(28338968-28339125)
chr6 (1-165)||(24292804-24292968)
chr6 (4-158)||(27205724-27205878)
chr6 (4-158)||(27243350-27243504)
chr6 (1-165)||(16574985-16575149)
chr6 (1-165)||(16620231-16620395)
chr6 (1-165)||(28312725-28312889)
chr6 (7-163)||(25756640-25756799)
chr6 (187-255)||(28312187-28312255)
chr6 (7-98)||(21764974-21765068)
chr6 (187-255)||(27189993-27190061)
chr6 (187-255)||(27259179-27259247)
chr6 (187-255)||(28260853-28260921)
chr6 (187-255)||(28284995-28285063)
chr6 (187-255)||(28339602-28339670)
chr6 (187-255)||(29590095-29590163)
chr6 (187-255)||(25115109-25115177)
chr6 (55-140)||(27559045-27559130)
chr6 (187-255)||(16574447-16574515)
chr6 (187-255)||(16620865-16620933)
chr6 (187-255)||(16961138-16961206)
chr6 (6-141)||(22436988-22437126)
chr6 (187-255)||(22828011-22828079)
chr6 (187-255)||(2872458-2872527)
chr6 (187-255)||(5836884-5836952)
chr6 (187-255)||(24293438-24293506)
chr6 (187-255)||(27559625-27559693)
chr6 (7-141)||(18404969-18405106)
chr6 (187-255)||(16925296-16925364)
chr6 (187-255)||(22436426-22436494)
chr6 (187-255)||(19867244-19867312)
[»] chr8 (38 HSPs)
chr8 (6-165)||(18859874-18860033)
chr8 (1-165)||(17671342-17671506)
chr8 (1-165)||(22126279-22126443)
chr8 (1-158)||(19481392-19481549)
chr8 (7-164)||(22117501-22117658)
chr8 (7-163)||(22043126-22043285)
chr8 (1-165)||(19115697-19115861)
chr8 (1-165)||(20015583-20015747)
chr8 (7-159)||(32603448-32603603)
chr8 (7-161)||(30310467-30310624)
chr8 (13-163)||(22031402-22031554)
chr8 (7-161)||(15536684-15536841)
chr8 (187-255)||(19482026-19482094)
chr8 (187-255)||(17671976-17672044)
chr8 (187-255)||(19115159-19115227)
chr8 (187-255)||(20016217-20016285)
chr8 (187-255)||(22126913-22126981)
chr8 (187-255)||(18859336-18859404)
chr8 (187-255)||(22118129-22118197)
chr8 (187-255)||(15536142-15536210)
chr8 (187-255)||(22030862-22030930)
chr8 (187-255)||(30311098-30311166)
chr8 (187-255)||(22042586-22042654)
chr8 (187-255)||(22129571-22129639)
chr8 (187-255)||(19980726-19980794)
chr8 (187-255)||(21164492-21164560)
chr8 (187-255)||(21391815-21391883)
chr8 (187-255)||(21781141-21781209)
chr8 (187-255)||(32602904-32602972)
chr8 (187-255)||(21786309-21786377)
chr8 (187-255)||(21253704-21253772)
chr8 (7-100)||(18880980-18881076)
chr8 (187-255)||(21920058-21920126)
chr8 (199-255)||(22421858-22421914)
chr8 (6-98)||(19981331-19981426)
chr8 (210-255)||(22989804-22989849)
chr8 (187-255)||(22246387-22246455)
chr8 (46-162)||(28984211-28984327)
[»] chr2 (50 HSPs)
chr2 (1-162)||(21139398-21139559)
chr2 (1-165)||(24712896-24713060)
chr2 (2-164)||(24265233-24265395)
chr2 (1-165)||(9338444-9338608)
chr2 (1-165)||(9487078-9487242)
chr2 (1-158)||(10871719-10871876)
chr2 (1-165)||(16984102-16984266)
chr2 (1-165)||(22322759-22322923)
chr2 (1-164)||(24874167-24874330)
chr2 (1-165)||(27374131-27374295)
chr2 (1-164)||(44382987-44383150)
chr2 (1-165)||(17001862-17002026)
chr2 (7-163)||(22462901-22463060)
chr2 (7-160)||(23116479-23116635)
chr2 (7-159)||(23205182-23205337)
chr2 (7-159)||(23676786-23676941)
chr2 (25-163)||(24704920-24705061)
chr2 (187-255)||(21143092-21143160)
chr2 (187-255)||(9337906-9337974)
chr2 (187-255)||(9486540-9486608)
chr2 (187-255)||(10871174-10871242)
chr2 (187-255)||(16983564-16983632)
chr2 (187-255)||(17001324-17001392)
chr2 (187-255)||(22323393-22323461)
chr2 (187-255)||(24874801-24874869)
chr2 (187-255)||(27220340-27220408)
chr2 (1-163)||(24678351-24678516)
chr2 (1-158)||(24657072-24657232)
chr2 (187-255)||(24712358-24712426)
chr2 (187-255)||(27373593-27373661)
chr2 (187-255)||(41606436-41606504)
chr2 (187-255)||(44383621-44383689)
chr2 (41-160)||(11351168-11351287)
chr2 (187-255)||(24264694-24264762)
chr2 (187-255)||(24657709-24657777)
chr2 (187-255)||(24705533-24705601)
chr2 (7-98)||(21320423-21320517)
chr2 (187-255)||(21323317-21323385)
chr2 (199-255)||(23204638-23204694)
chr2 (187-255)||(24677811-24677879)
chr2 (1-158)||(23028876-23029035)
chr2 (216-255)||(11351800-11351839)
chr2 (1-141)||(23039991-23040134)
chr2 (187-255)||(22733825-22733893)
chr2 (187-255)||(23074187-23074255)
chr2 (187-255)||(23105779-23105847)
chr2 (187-229)||(11351762-11351804)
chr2 (7-100)||(22733194-22733290)
chr2 (7-100)||(23065340-23065436)
chr2 (7-100)||(23074790-23074886)
[»] chr1 (30 HSPs)
chr1 (1-165)||(33387978-33388142)
chr1 (2-164)||(21833549-21833711)
chr1 (1-164)||(22400567-22400730)
chr1 (1-165)||(51330441-51330605)
chr1 (1-164)||(21842459-21842622)
chr1 (1-163)||(19109616-19109780)
chr1 (1-158)||(41350617-41350774)
chr1 (1-155)||(16347544-16347698)
chr1 (7-159)||(17041968-17042122)
chr1 (7-163)||(24784809-24784968)
chr1 (7-161)||(21228508-21228665)
chr1 (187-255)||(16348178-16348246)
chr1 (187-255)||(41351251-41351319)
chr1 (187-255)||(51331075-51331143)
chr1 (187-255)||(21833010-21833078)
chr1 (187-255)||(21839658-21839726)
chr1 (47-160)||(22435728-22435841)
chr1 (187-255)||(19109076-19109144)
chr1 (187-255)||(24785440-24785508)
chr1 (187-255)||(33388612-33388680)
chr1 (7-107)||(21176671-21176774)
chr1 (7-142)||(20081328-20081466)
chr1 (187-253)||(22502872-22502938)
chr1 (187-255)||(17042598-17042666)
chr1 (187-255)||(21233314-21233382)
chr1 (46-96)||(20074703-20074753)
chr1 (190-253)||(22359830-22359893)
chr1 (199-253)||(21861968-21862022)
chr1 (7-100)||(22401903-22401999)
chr1 (187-255)||(21751645-21751713)
[»] scaffold0431 (2 HSPs)
scaffold0431 (1-164)||(10629-10792)
scaffold0431 (187-255)||(10090-10158)
[»] chr5 (44 HSPs)
chr5 (1-164)||(19773124-19773287)
chr5 (1-164)||(22329946-22330109)
chr5 (1-165)||(16359665-16359829)
chr5 (1-165)||(34569657-34569821)
chr5 (1-164)||(29473132-29473295)
chr5 (1-165)||(27521569-27521733)
chr5 (1-164)||(14996798-14996961)
chr5 (1-164)||(22351083-22351246)
chr5 (1-164)||(27682459-27682622)
chr5 (1-164)||(37288555-37288718)
chr5 (1-164)||(41774006-41774169)
chr5 (7-164)||(22137832-22137989)
chr5 (1-164)||(27613520-27613683)
chr5 (1-165)||(40711943-40712107)
chr5 (7-163)||(18782279-18782438)
chr5 (7-160)||(20803765-20803921)
chr5 (7-160)||(23461139-23461295)
chr5 (1-158)||(27665562-27665706)
chr5 (187-255)||(16359127-16359195)
chr5 (187-255)||(22330580-22330648)
chr5 (187-255)||(22350544-22350612)
chr5 (187-255)||(27612981-27613049)
chr5 (187-255)||(27666183-27666251)
chr5 (187-255)||(34569119-34569187)
chr5 (187-255)||(40711405-40711473)
chr5 (187-255)||(41773467-41773535)
chr5 (187-255)||(19772585-19772653)
chr5 (187-255)||(22137293-22137361)
chr5 (187-255)||(27521031-27521099)
chr5 (187-255)||(29473766-29473834)
chr5 (187-255)||(37289189-37289257)
chr5 (187-255)||(14997432-14997500)
chr5 (187-255)||(18781739-18781807)
chr5 (187-255)||(20803222-20803290)
chr5 (187-247)||(21343107-21343167)
chr5 (187-255)||(27683093-27683161)
chr5 (187-255)||(21882399-21882467)
chr5 (18-100)||(25429648-25429733)
chr5 (6-99)||(23526280-23526376)
chr5 (187-255)||(25429046-25429114)
chr5 (41-96)||(23078004-23078059)
chr5 (7-42)||(23537277-23537312)
chr5 (46-96)||(22505893-22505943)
chr5 (41-98)||(21883005-21883062)
[»] scaffold0028 (6 HSPs)
scaffold0028 (3-164)||(21258-21419)
scaffold0028 (3-164)||(11730-11891)
scaffold0028 (7-162)||(55267-55422)
scaffold0028 (187-255)||(53449-53517)
scaffold0028 (187-255)||(11191-11259)
scaffold0028 (187-255)||(17659-17727)
[»] scaffold0055 (2 HSPs)
scaffold0055 (1-165)||(22507-22671)
scaffold0055 (187-255)||(21969-22037)
[»] scaffold0052 (1 HSPs)
scaffold0052 (1-165)||(7496-7660)
[»] scaffold0044 (4 HSPs)
scaffold0044 (1-164)||(3685-3848)
scaffold0044 (7-154)||(17431-17581)
scaffold0044 (187-255)||(3146-3214)
scaffold0044 (187-255)||(16882-16950)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-162)||(424571-424729)
[»] scaffold1881 (1 HSPs)
scaffold1881 (7-161)||(363-520)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-162)||(48928-49083)
[»] scaffold0009 (2 HSPs)
scaffold0009 (7-160)||(229735-229891)
scaffold0009 (46-96)||(251948-251998)
[»] scaffold0451 (1 HSPs)
scaffold0451 (7-163)||(13915-14074)
[»] scaffold0177 (3 HSPs)
scaffold0177 (7-163)||(11239-11398)
scaffold0177 (7-163)||(14924-15083)
scaffold0177 (187-255)||(11870-11938)
[»] scaffold2059 (1 HSPs)
scaffold2059 (7-161)||(652-809)
[»] scaffold0285 (1 HSPs)
scaffold0285 (7-161)||(5262-5419)
[»] scaffold0080 (9 HSPs)
scaffold0080 (7-160)||(10122-10278)
scaffold0080 (7-160)||(12777-12933)
scaffold0080 (7-158)||(32146-32300)
scaffold0080 (187-255)||(31606-31674)
scaffold0080 (187-255)||(37072-37140)
scaffold0080 (187-255)||(10752-10820)
scaffold0080 (187-255)||(13407-13475)
scaffold0080 (55-158)||(37612-37715)
scaffold0080 (187-251)||(54363-54427)
[»] scaffold0010 (2 HSPs)
scaffold0010 (7-163)||(14686-14845)
scaffold0010 (210-255)||(4637-4682)
[»] scaffold0546 (1 HSPs)
scaffold0546 (7-163)||(141-300)
[»] scaffold0079 (3 HSPs)
scaffold0079 (7-163)||(36760-36919)
scaffold0079 (187-255)||(28800-28868)
scaffold0079 (187-246)||(36229-36288)
[»] scaffold1220 (1 HSPs)
scaffold1220 (10-160)||(1-154)
[»] scaffold0019 (1 HSPs)
scaffold0019 (7-163)||(171380-171539)
[»] scaffold0008 (2 HSPs)
scaffold0008 (7-161)||(114-271)
scaffold0008 (7-152)||(139493-139641)
[»] scaffold0289 (1 HSPs)
scaffold0289 (7-163)||(50-209)
[»] scaffold0130 (1 HSPs)
scaffold0130 (49-158)||(7707-7816)
[»] scaffold0412 (1 HSPs)
scaffold0412 (7-160)||(15462-15618)
[»] scaffold0550 (2 HSPs)
scaffold0550 (7-160)||(10041-10197)
scaffold0550 (187-255)||(10672-10740)
[»] scaffold0560 (1 HSPs)
scaffold0560 (187-255)||(8255-8323)
[»] scaffold0454 (1 HSPs)
scaffold0454 (187-255)||(9662-9730)
[»] scaffold0102 (2 HSPs)
scaffold0102 (7-98)||(50228-50322)
scaffold0102 (187-247)||(50859-50919)
[»] scaffold0042 (2 HSPs)
scaffold0042 (187-255)||(37334-37402)
scaffold0042 (6-141)||(36702-36840)
[»] scaffold0297 (1 HSPs)
scaffold0297 (7-141)||(7540-7677)
[»] scaffold0181 (2 HSPs)
scaffold0181 (22-140)||(28826-28947)
scaffold0181 (187-255)||(29442-29510)
[»] scaffold0819 (1 HSPs)
scaffold0819 (7-160)||(379-535)
[»] scaffold0081 (4 HSPs)
scaffold0081 (1-158)||(21871-22031)
scaffold0081 (1-158)||(37295-37455)
scaffold0081 (187-255)||(21326-21394)
scaffold0081 (187-255)||(36750-36818)
[»] scaffold1459 (2 HSPs)
scaffold1459 (22-145)||(990-1116)
scaffold1459 (187-255)||(1546-1614)
[»] scaffold0393 (1 HSPs)
scaffold0393 (187-255)||(15508-15576)
[»] scaffold0215 (1 HSPs)
scaffold0215 (187-255)||(28009-28077)
[»] scaffold0149 (1 HSPs)
scaffold0149 (187-255)||(551-619)
[»] scaffold0022 (3 HSPs)
scaffold0022 (187-255)||(35228-35296)
scaffold0022 (187-255)||(41354-41422)
scaffold0022 (187-255)||(75074-75142)
[»] scaffold0017 (3 HSPs)
scaffold0017 (187-255)||(17580-17648)
scaffold0017 (55-140)||(17000-17085)
scaffold0017 (187-247)||(195352-195412)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-158)||(3131-3291)
[»] scaffold1985 (1 HSPs)
scaffold1985 (187-255)||(86-154)
[»] scaffold0501 (2 HSPs)
scaffold0501 (187-255)||(12385-12453)
scaffold0501 (7-97)||(252-345)
[»] scaffold1423 (1 HSPs)
scaffold1423 (1-99)||(255-356)
[»] scaffold0120 (2 HSPs)
scaffold0120 (7-97)||(11591-11684)
scaffold0120 (7-142)||(14367-14505)
[»] scaffold0611 (1 HSPs)
scaffold0611 (7-100)||(9326-9422)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-98)||(367-467)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-158)||(30451-30611)
scaffold0023 (187-255)||(151803-151871)
scaffold0023 (199-255)||(2031-2087)
scaffold0023 (187-255)||(47478-47546)
[»] scaffold0410 (1 HSPs)
scaffold0410 (55-160)||(406-511)
[»] scaffold0198 (1 HSPs)
scaffold0198 (7-142)||(30570-30708)
[»] scaffold0031 (1 HSPs)
scaffold0031 (187-255)||(52439-52507)
[»] scaffold0034 (1 HSPs)
scaffold0034 (7-83)||(122059-122138)
[»] scaffold0114 (2 HSPs)
scaffold0114 (187-255)||(17857-17925)
scaffold0114 (1-141)||(17226-17369)
[»] scaffold0084 (2 HSPs)
scaffold0084 (7-141)||(8507-8644)
scaffold0084 (187-255)||(7945-8013)
[»] scaffold0040 (2 HSPs)
scaffold0040 (189-255)||(17600-17666)
scaffold0040 (187-255)||(111421-111489)
[»] scaffold0621 (1 HSPs)
scaffold0621 (187-255)||(4156-4224)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-100)||(216-318)
[»] scaffold0324 (1 HSPs)
scaffold0324 (187-255)||(12728-12795)
[»] scaffold0243 (1 HSPs)
scaffold0243 (190-254)||(24462-24526)
[»] scaffold0218 (1 HSPs)
scaffold0218 (187-255)||(25226-25294)
[»] scaffold0006 (1 HSPs)
scaffold0006 (187-255)||(103949-104017)
[»] scaffold1845 (1 HSPs)
scaffold1845 (41-96)||(1224-1279)
[»] scaffold0908 (1 HSPs)
scaffold0908 (204-255)||(310-361)
[»] scaffold0074 (1 HSPs)
scaffold0074 (189-244)||(5846-5901)
[»] scaffold0064 (1 HSPs)
scaffold0064 (65-160)||(69366-69461)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-99)||(8540-8641)
scaffold0029 (1-40)||(107654-107693)
[»] scaffold0413 (1 HSPs)
scaffold0413 (187-229)||(3349-3391)
[»] scaffold0001 (1 HSPs)
scaffold0001 (46-96)||(514278-514328)
[»] scaffold0270 (2 HSPs)
scaffold0270 (187-244)||(6606-6663)
scaffold0270 (187-244)||(13736-13793)
[»] scaffold0088 (1 HSPs)
scaffold0088 (47-96)||(30263-30312)
[»] scaffold0993 (1 HSPs)
scaffold0993 (199-255)||(604-660)
[»] scaffold0647 (1 HSPs)
scaffold0647 (187-255)||(7173-7241)
[»] scaffold0333 (1 HSPs)
scaffold0333 (187-227)||(18400-18440)
[»] scaffold0278 (1 HSPs)
scaffold0278 (187-255)||(1174-1242)
[»] scaffold0138 (1 HSPs)
scaffold0138 (187-255)||(6601-6669)
[»] scaffold0075 (1 HSPs)
scaffold0075 (187-255)||(55984-56052)


Alignment Details
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14683962 - 14683800
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  14683962 cagaggatggtcgatgataggcggcctaagaagaaggatgctaccgagattgtgtgtttcaattgtggtgggaaaggccacaaaagctatgtctgtcctg 14683863  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14683862 aagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 14683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 19635531 - 19635368
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  19635531 cagaggatggtcgatgataggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtatgccctg 19635432  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  19635431 aagaaatcaagaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 19635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17091766 - 17091930
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  17091766 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 17091865  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  17091866 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 17091930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14300596 - 14300759
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || | ||    
T  14300596 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccttg 14300695  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  14300696 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 14300759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 40476435 - 40476272
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| || || ||||    
T  40476435 cagaagatggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctg 40476336  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || ||||||||||| | |||||||||||| ||||||||||||||||| |||||||||||    
T  40476335 aagaaatcaagaagtgtgttcagtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 40476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 8389807 - 8389643
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  8389807 cagaagatggtcgatgttaggcgacctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 8389708  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  8389707 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 8389643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 12479995 - 12479831
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| || || ||||    
T  12479995 cagaagatggtcgatgttaggcggcctaagaggaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccataagagcaacgtctgccctg 12479896  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  12479895 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 12479831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27714731 - 27714568
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  || ||||    
T  27714731 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgccctg 27714632  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  27714631 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 27714568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 19775410 - 19775574
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  || ||||    
T  19775410 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgattcaattgtggtgagaaaggccacaagagcaacgcctgccctg 19775509  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  19775510 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtaca 19775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 23959142 - 23958978
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  || ||||    
T  23959142 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgccctg 23959043  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  23959042 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtaca 23958978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 13513742 - 13513585
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    ||||| |||| |||||||||||||||||||||||||   ||||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||||||    
T  13513742 atggttgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgtcctgaag 13513643  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  13513642 agatcaagaaatgtgtccggtgtggcaagaagggtcatattatagctgattgcaagcg 13513585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 16233612 - 16233773
Alignment:
Q  4 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||| |  |||||||| |    
T  16233612 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtacttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgagg 16233711  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  16233712 aaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtaca 16233773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 8050240 - 8050404
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||| || || ||||    
T  8050240 cagaagatggtcgatgtgagacggcctaagaagagggatgctgcagagattgtgtgtttcaattgtggtgagaagggccacaagagcaacgtctgccctg 8050339  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || ||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||    
T  8050340 aggaaatcaagaagtgtgttcggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 8050404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 18604439 - 18604596
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| |    |||||| | ||||| || ||||| | |||||||||||| || ||||||||||||||||    
T  18604439 atggtcgatgataggcggcctaagaagaaggatgctccttcggagattatttgttttaactgtggcgagaaaggccacaagagtaatgtttgtcctgaag 18604538  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  18604539 agatcaagaaatgtgtccggtgtggcaaaaagggtcttattgtagctgattgcaagcg 18604596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 18224093 - 18224236
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||| |||||||||||||||||||||   || |||||||| |||||||| ||||| | ||||||||||||  | ||||||||||||||||    
T  18224093 atggtcgatgatagacggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagtgtaatgtttgtcctgaag 18224192  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgta 147  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
T  18224193 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgta 18224236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 8389173 - 8389105
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8389173 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 8389105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 12479361 - 12479293
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12479361 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 12479293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16234243 - 16234311
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16234243 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16234311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 17092400 - 17092468
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17092400 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 17092468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 23958508 - 23958440
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23958508 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 23958440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 27714097 - 27714029
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27714097 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27714029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 8050874 - 8050942
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  8050874 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacacgacggtatcttgatgt 8050942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 14301230 - 14301298
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14301230 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 14301298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 19634897 - 19634829
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19634897 aggaaagtggtgcaaagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 19634829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 19776044 - 19776112
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  19776044 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacagtatcttgatgt 19776112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 40475801 - 40475733
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  40475801 aggaaagtggtgcagagtttgtatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 40475733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16352781 - 16352849
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  16352781 aggaaagtggtgcagagttcttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 16352849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 18224697 - 18224765
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18224697 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 18224765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 16250559 - 16250629
Alignment:
Q  93 ttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||||||  |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16250559 ttgtcctatagagatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagttgattgcaagcgta 16250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 14683328 - 14683260
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  14683328 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 14683260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 16248296 - 16248388
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    |||||||||| ||||||||||||||||||||||||| ||   ||||||   |||||||||| ||||| |||||||||||| || |||||||||    
T  16248296 atggtcgatgataggcggcctaagaagaaggatgctccaactgagattacatgtttcaattatggtgagaaaggccacaagagtaatgtttgt 16248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 15145143 - 15145212
Alignment:
Q  187 aggaaagt-ggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||| ||| ||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||    
T  15145143 aggaaagtaggtgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 15145212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16251101 - 16251169
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| ||| |||||||  ||||||||||| ||||||| |||||||| |||||||    
T  16251101 aggaaagtggtgcagagttcttaactactaaatagctgaagcaaatggaacgtgatggtattttgatgt 16251169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 22632461 - 22632393
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| |||||||||||| |||||||  | ||||| |||||||| |||||||    
T  22632461 aggaaagtggcgcagagtttttgtctactaagcagttgaagcagttagaacgtgatggtattttgatgt 22632393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 16350362 - 16350397
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct 42  Q
    |||||||||| |||||||||||||||||||||||||    
T  16350362 atggtcgatgataggcggcctaagaagaaggatgct 16350397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 14188253 - 14188199
Alignment:
Q  201 gagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||| || ||||||||||||||||||||||| ||||| ||||| || |||||||    
T  14188253 gagttcttgtctactaagcagctgaagcaactagaacgagatggaattttgatgt 14188199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16286 - 16354
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  || ||||||| |||||||| |||||||||||  | ||||| |||||||| |||||||    
T  16286 aggaaagtggcgcaaagtttttgtctactaaacagctgaagcagttagaacgtgatggtattttgatgt 16354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24186204 - 24186042
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  24186204 cagaggatggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgtgaaaggccacaaaagcaatgtctgtcctg 24186105  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24186104 aagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 24186042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10008614 - 10008450
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  10008614 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 10008515  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  10008514 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 10008450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15345361 - 15345525
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  15345361 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 15345460  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  15345461 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 15345525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 20059170 - 20059334
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  20059170 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 20059269  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  20059270 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 20059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5110525 - 5110682
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  5110525 cagaagatggtcgatgttaggcagcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 5110624  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || ||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  5110625 aggaaattaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaa 5110682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10909224 - 10909060
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  10909224 cagaagatggtcgatgttaggcggcctaagaagaaggatgttgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 10909125  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  10909124 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 10909060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 12889723 - 12889559
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  12889723 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 12889624  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  12889623 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 12889559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 43165689 - 43165525
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  43165689 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 43165590  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  43165589 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 43165525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 48428461 - 48428297
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  48428461 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 48428362  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  48428361 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 48428297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 15399634 - 15399797
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  15399634 cagaagatggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctg 15399733  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  15399734 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatattgtagccgaatgcaagcgtac 15399797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16638787 - 16638624
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  16638787 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 16638688  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || |||||||||| ||||||||||||||| |||||| |||||||||||||||| |||||    
T  16638687 aagaaatcaagaagtgtgcccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 16638624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 15713172 - 15713335
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  15713172 cagaggatggtcgatgataggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 15713271  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  15713272 aagaaatcaagaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 15713335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 26790529 - 26790692
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || |  ||||    
T  26790529 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctaccctg 26790628  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  26790629 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 26790692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 16753820 - 16753981
Alignment:
Q  4 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||| |    
T  16753820 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctgagg 16753919  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || |||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||||    
T  16753920 aaatcaagaagtgtgtctggtgtggtaagaagggtcatgttgtagctgattgcaatcgtaca 16753981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 6603749 - 6603585
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  6603749 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 6603650  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || ||||| |||||||||||||| ||||||| |||| |||||||||||||||| ||||||    
T  6603649 aggaaatcaagaactgtgtccggtgtggtaagaaggatcatgttgtagctgattgcaatcgtaca 6603585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 13255704 - 13255540
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| | |||| |||    
T  13255704 cagaagatggtcgatgttaggcggcctaagaggaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcttgttctg 13255605  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||    
T  13255604 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtagctgattgcaaccgtaca 13255540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 5422046 - 5422210
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| || || |  || ||||    
T  5422046 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagtaacgcctgccctg 5422145  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  5422146 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtaca 5422210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 53382134 - 53382298
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||| ||||| || |||||||    
T  53382134 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaactgtggcgagaaaggccacaagagcaacgtctgtcctg 53382233  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  53382234 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtaca 53382298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 16804066 - 16804223
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| |||   |||||   |||||||||||||||| |||||||||||| |||||||||||||||||||    
T  16804066 atggtcgatgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgaag 16804165  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  16804166 agatcaagaaatgtgtccggtgtggcaagaaaggtcatattgtagctgattgcaagcg 16804223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 15586508 - 15586672
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||| |  ||| |||    
T  15586508 cagaagatggtcgatgttaggcggcctaagaggaaggatgctgcggagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctg 15586607  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  15586608 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtaca 15586672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 3688957 - 3688803
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||| |  ||| |||    
T  3688957 cagaagatggtcgacgttaggcggcctaagaagaaggatgctgctgagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctg 3688858  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattg 155  Q
    | || || |||||||||||||||||||| |||||||||||| | |||||||||||    
T  3688857 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtcgtagctgattg 3688803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 23414909 - 23415066
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| |||||||| | ||| | |||||||||||| || |||||||||||| |||    
T  23414909 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaactatggcgagaaaggccacaagagtaatgtttgtcctaaag 23415008  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  23415009 agatcaagaaatgtgtccggtgtgacaagaagggtcatattgtagctgattgcaagcg 23415066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 16695175 - 16695018
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| |||   |||||   |||||||||||||| | |||||||| ||| || ||||||||||| |  |    
T  16695175 atggtcgatgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggcgagaaaggccgcaagagtaatgtttgtccggtgg 16695076  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16695075 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 16695018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 11861364 - 11861208
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| | |||||||||||||| |||||||||||| |||||||||||||| || |    
T  11861364 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagagg 11861265  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    || | ||||| ||| || ||||||| ||||||||||||| | |||||||||||||||    
T  11861264 aggtgaagaaatgtttctggtgtggtaagaagggtcatactttagctgattgcaagc 11861208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6597069 - 6596981
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaa 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  6597069 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaa 6596981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 3688323 - 3688255
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3688323 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 3688255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 12501950 - 12501788
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| |  || |||||||||||||||||||   |||| ||||||   |||||||||||||| | |||||||||||| |||||||||||||    
T  12501950 cagaggatggtcgaggaaagacggcctaagaagaaggatgttcctgctgagattacctgtttcaattgtggcgagaaaggccacaagagcaatgtttgtc 12501851  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    |||| ||| | ||||| ||| |||||||||||||||||||||| |   |||||||||||||||    
T  12501850 ctgaggaggtaaagaaatgtttccggtgtggcaagaagggtcacacattagctgattgcaagc 12501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 5422680 - 5422748
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5422680 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 5422748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 10908590 - 10908522
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10908590 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 10908522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 12889089 - 12889021
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12889089 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 12889021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 13255070 - 13255002
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13255070 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 13255002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 15587142 - 15587210
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15587142 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 15587210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 16638153 - 16638085
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16638153 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16638085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16754451 - 16754519
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16754451 aggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 16754519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 20059804 - 20059872
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20059804 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 20059872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 26791163 - 26791231
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26791163 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 26791231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 43165055 - 43164987
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43165055 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 43164987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 48427827 - 48427759
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48427827 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 48427759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 15400272 - 15400335
Alignment:
Q  192 agtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15400272 agtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 15400335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15359066 - 15358992
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaa 75  Q
    |||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  15359066 cagaagatggtcgatgataggcggcctaagaagaaggatgctattgagattgtgtgtttcaattgtggtgggaaa 15358992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 6603116 - 6603048
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  6603116 aggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 6603048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 10007980 - 10007912
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  10007980 aggaaagtggtgcagagtttttatctactaagcaactgaagcaactggaacgcgacggtatcttgatgt 10007912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 15345995 - 15346063
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  15345995 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 15346063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 15358463 - 15358395
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15358463 aggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacacgatggtatcttgatgt 15358395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 15713806 - 15713874
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  15713806 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacgatatcttgatgt 15713874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16804697 - 16804765
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  16804697 aggaaagtggtgcagagtttttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 16804765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 16694544 - 16694476
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  16694544 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 16694476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 53382768 - 53382836
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||    
T  53382768 aggaaagtggtgcagagtttttgtctaccaaacagctgaagcaactggaacgcgatggtatcttgatgt 53382836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 15066082 - 15065945
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||| ||||| | |||||||||||||   || | |||||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||    
T  15066082 atggtcgatgatagacggccaaggaagaaggatgctcctgctgcgattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccagaag 15065983  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    || | || |  ||| |||||||||| ||||||||||||    
T  15065982 aggtaaaaagatgtttccggtgtggtaagaagggtcat 15065945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 26191066 - 26191120
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcga 241  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26191066 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcga 26191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 24185570 - 24185502
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  24185570 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 24185502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 15358989 - 15358933
Alignment:
Q  109 aagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  15358989 aagaagtgtgtccggtgtggcaagaaaggtcatattgtagccgaatgcaagcgtaca 15358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 14874318 - 14874386
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||| |||| ||||||| || | ||||||||||||||||||||||||||| |||||||| |||||||    
T  14874318 aggaaattggtgcagagttcttgtttactaagcagctgaagcaactggaacgtgatggtatattgatgt 14874386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17497708 - 17497606
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||||||||||||| | |||   |||||||||||||||||||   ||||||||||| ||||| | |||||||| |||||||||||| || |||| |||||    
T  17497708 cagaagatggtcgaagatagatagcctaagaagaaggatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtc 17497609  T
Q  98 ctg 100  Q
    |||    
T  17497608 ctg 17497606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 18437520 - 18437452
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||  | ||||| ||||| ||||| ||||    
T  18437520 aggaaagtggtgcagagtttttatctactaagcagctgaagcagttagaacgtgatggaatcttaatgt 18437452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 15065451 - 15065400
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacg 238  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  15065451 aggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacg 15065400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23079130 - 23079230
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| ||||| | |||||||||||||   || | |||||| ||||| |||||||||| |||||||||||| |||||||||||||    
T  23079130 cagaggatggtcgaggatagacggccaaggaagaaggatgctcctgctgtgattgtttgttttaattgtggtgagaaaggccacaagagcaatgtttgtc 23079229  T
Q  98 c 98  Q
    |    
T  23079230 c 23079230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14873698 - 14873805
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgc---tgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| ||||| | ||||||||||||   ||| |||||||| ||||| |||||||||| ||||||||| || ||||||| |||||    
T  14873698 cagaggatggtcgaggatagacggccgaggaagaaggatgctcatgctgagattgtctgttttaattgtggtgagaaaggccataagagcaatgcttgtc 14873797  T
Q  98 ctgaagag 105  Q
    ||| ||||    
T  14873798 ctggagag 14873805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 15262008 - 15261942
Alignment:
Q  189 gaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||  |||||||||| ||||||||||||||||||||| | ||||| ||||| || |||||||    
T  15262008 gaaagtggcgcagagtttttgtctactaagcagctgaagcaattagaacgtgatggaattttgatgt 15261942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 17492231 - 17492163
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  | |||||||| ||||||||||||||||||||  | ||||| |||||||| |||||||    
T  17492231 aggaaagtggcgcggagtttttgtctactaagcagctgaagcagttagaacgtgatggtattttgatgt 17492163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 14579158 - 14579200
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagca 229  Q
    ||||||||||  |||| ||||||||||||||||||||||||||    
T  14579158 aggaaagtggcgcagaatttttatctactaagcagctgaagca 14579200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 10408947 - 10408831
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagat--taagaagtgtgtccggtgtggcaagaagggtcatat 143  Q
    |||||||| |||| ||| ||||||| |||||||||||| || |||||||||   ||||||||  || ||||||  || |||||||  |||||||||| |     
T  10408947 gagattgtttgttacaaatgtggtgagaaaggccacaagagtaatgtttgt--ggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacag 10408850  T
Q  144 tgtagctgattgcaagcgt 162  Q
    | ||||||| |||||||||    
T  10408849 tttagctgaatgcaagcgt 10408831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 134; Significance: 8e-70; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 41573 - 41416
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    |||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41573 atggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 41474  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
      |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41473 gcaagaagtgtgtctggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 41416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 13007 - 13166
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||  ||| |||||||||||||||   || || ||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  13007 atggtcgatgataggaagccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaag 13106  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  13107 agatcaagaaatgtgtctggtgtggtaagaagggtcatattgtagctgattgcaagcgta 13166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 40945 - 40877
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40945 aggaaagtggtgcagagtttttatctactaggcagctgaagcaactggaacgcgatggtatcttgatgt 40877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 13638 - 13706
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  13638 aggaaagtggtgcagaattcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 13706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 362 - 199
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| | || |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  362 cagaggatggtcgatgataggcggcctaagaagaaggatgctactgaaattgtgtgtttcaattatggtgggaaaggccacaaaagcaatgtttgtcctg 263  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  262 aagagattaagaaatgtgtccggtgtggcaagaagggtcattttgtagctgattgcaagcgtac 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8682 - 8520
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  8682 cagaggatggtcgatgataggcggcctaagaagaaggatgctaccgagattgtgtgtttcaattgtggtgggagaggccacaaaagcaatgtctgtcctg 8583  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8582 aagagatcaagaagtgtgtccagtgtggcaagaagggtcatattgtagctgattgcaagcgta 8520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 8048 - 7980
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||| |||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  8048 aggatagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 7980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12690885 - 12690723
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  12690885 cagaggatggtcgatgataggcggcctaagaagaaggatgctaccgagattgtgtgtttcaattgtggtgtgaaagtccacaaaagcaatgtctgtcctg 12690786  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12690785 aagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 12690723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14957892 - 14957730
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| |||||||||||||||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  14957892 cagaggatggtcgatgataggcggcctaagaagaaggatactaccgagattgtgtgtttcaattgtggtgtgaaaggccacaaaagcaatgtctgtcctg 14957793  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14957792 aagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 14957730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11549988 - 11550150
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  11549988 cagaggatggtcgatgataggcggcctaagaagaaggatgctaccgagattgtgtgtttcaattgtggtgtgaaaggccacaaaagcaatgtctgtcctg 11550087  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  11550088 aagagatcaagaagtgtgtctggtgtggcaagaagggtcatattgtagttgattgcaagcgta 11550150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13689425 - 13689262
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  13689425 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 13689326  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  13689325 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 13689262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 15157943 - 15158106
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  15157943 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 15158042  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  15158043 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 15158106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 8710989 - 8710825
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  |||||||    
T  8710989 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgcctgtcctg 8710890  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  8710889 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtaca 8710825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 11234099 - 11234262
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || || ||||    
T  11234099 cagaggatggtcgatgataggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctg 11234198  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  11234199 aagaaatcaagaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 11234262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18181127 - 18180964
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| || ||||    
T  18181127 cagaagatggtcgaggttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggcgagaaaggccacgaaagcaatgtctgccctg 18181028  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  18181027 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 18180964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14335780 - 14335616
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  14335780 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 14335681  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  14335680 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtaca 14335616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 10873845 - 10873681
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| ||||| |  |||||||    
T  10873845 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaagaccacaagagcaacgcctgtcctg 10873746  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  10873745 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtaca 10873681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 44788237 - 44788401
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| |  |||||||    
T  44788237 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggcgagaaaggccacaagagcaacgcctgtcctg 44788336  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  44788337 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtaca 44788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 9591745 - 9591588
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    ||||| |||| |||||||||||||||||||||||||   ||||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||||||    
T  9591745 atggttgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgtcctgaag 9591646  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  9591645 agatcaagaaatgtgtccggtgtggcaagaagggtcatattatagctgattgcaagcg 9591588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18587057 - 18587220
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  18587057 cagaagatggtcgatgttaggcggcctaagaagaaggatgctacagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 18587156  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||| |||||||||||| | || ||||||||||| |||||    
T  18587157 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtac 18587220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 11984373 - 11984214
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||| ||||||||||||||||||||| |||   |||||   |||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  11984373 atggtcgatgatagacggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtgagaaaggccacaagagcaatgtttgtactgaag 11984274  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11984273 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 11984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 16726330 - 16726489
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||| |||||||||||||||   || || ||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  16726330 atggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaag 16726429  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  16726430 agatcaagaaatgtgtccgatgtggcaaaaagggtcatattgtagctgattgcaagcgta 16726489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 17703344 - 17703503
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||| |||||||||||||||   || || ||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  17703344 atggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaag 17703443  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  17703444 agatcaagaaatgtgtccgatgtggcaaaaagggtcatattgtagctgattgcaagcgta 17703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 10873440 - 10873372
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10873440 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 10873372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 8200798 - 8200730
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8200798 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 8200730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 8710355 - 8710287
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8710355 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 8710287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 11234733 - 11234801
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11234733 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 11234801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 14335146 - 14335078
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14335146 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 14335078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 18587691 - 18587759
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18587691 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 18587759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 44788871 - 44788939
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44788871 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 44788939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 13688791 - 13688723
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13688791 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 13688723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 14149956 - 14150024
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  14149956 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggagcgcgatggtattttgatgt 14150024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 15158577 - 15158645
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15158577 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 15158645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 9591118 - 9591050
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9591118 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 9591050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 11550622 - 11550690
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  11550622 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 11550690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 14957304 - 14957236
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  14957304 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 14957236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16726903 - 16726971
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  16726903 aggaaagtggtgcagagttcttatctactaagaagctgaagcaaatggaacgcgatggtattttgatgt 16726971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 17703975 - 17704043
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  17703975 aggaaagtggtgcagagttcttatctactaagaagctgaagcaaatggaacgcgatggtattttgatgt 17704043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 15146415 - 15146464
Alignment:
Q  198 ccagagtttttatctactaagcagctgaagcaactggaacgcgatggtat 247  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15146415 ccagagtttttgtctactaagcagctgaagcaactggaacgcgatggtat 15146464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 18180493 - 18180427
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||| |  ||||||||||||||||||||||||||||||| |||||||||||||    
T  18180493 aggaaagtggtgcagagtttgt--ctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 18180427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 12690246 - 12690184
Alignment:
Q  193 gtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  12690246 gtggtgcagagttcttatctactaagcagctgaagcaaatggaacgtgatggtattttgatgt 12690184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 26115499 - 26115615
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagat--taagaagtgtgtccggtgtggcaagaagggtcatat 143  Q
    |||||||| |||| ||| ||||||| |||||||||||| || |||||||||   ||||||||  || ||||||  || |||||||  |||||||||| |     
T  26115499 gagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgt--ggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacag 26115596  T
Q  144 tgtagctgattgcaagcgt 162  Q
    | ||||||| |||||||||    
T  26115597 tttagctgaatgcaagcgt 26115615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 49155641 - 49155525
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagat--taagaagtgtgtccggtgtggcaagaagggtcatat 143  Q
    |||||||| || | ||| ||||||| |||||||||||| || |||||||||   ||||||||  || ||||||  || |||||||  ||||||||||||     
T  49155641 gagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgt--ggaagagatgataggaagtgcttcaggtgtggtcagaagggtcatag 49155544  T
Q  144 tgtagctgattgcaagcgt 162  Q
    | ||||||| |||||||||    
T  49155543 tttagctgaatgcaagcgt 49155525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 8e-67; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 22829414 - 22829570
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    |||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  22829414 atggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtggaaaaggccacaaaagcaatgtctgtcctgaagaga 22829513  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22829514 tcaagaagtgtgtctggtgtggcaagaagggtcatattgtagctgattgcaagcgta 22829570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 29589461 - 29589625
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  29589461 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 29589560  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  29589561 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 29589625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5836250 - 5836412
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||| |    
T  5836250 cagaggatggtcgatgataggcgacccaagaagaaggatgctgctgagattgtgtgtttcaactgtggtgggaaaggccacgaaagcaatgtttgtccag 5836349  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5836350 aagagatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagccgattgcaagcgta 5836412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 2871824 - 2871981
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || || ||||    
T  2871824 cagaagatggtcgatgttaggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctg 2871923  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||| |||||    
T  2871924 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgactgcaa 2871981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 25115805 - 25115648
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    |||||||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |    
T  25115805 atggtcgatgataggcagcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaggaaa 25115706  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  25115705 tcaagaagtgtgttcggtgtggcaagaaaggtcatattgtagctgattgcaatcgtac 25115648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28260219 - 28260376
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |  ||||| |    
T  28260219 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgggaaaggccacaagagcaacgcctgtcccg 28260318  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    |||| || |||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  28260319 aagaaatcaagaagtgtgtccggtgtggtaagagaggtcatgttgtagctgattgcaa 28260376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 28285697 - 28285540
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |  ||||| |    
T  28285697 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgggaaaggccacaagagcaacgcctgtcccg 28285598  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    |||| || |||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  28285597 aagaaatcaagaagtgtgtccggtgtggtaagagaggtcatgttgtagctgattgcaa 28285540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28338968 - 28339125
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |  ||||| |    
T  28338968 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgggaaaggccacaagagcaacgcctgtcccg 28339067  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    |||| || |||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  28339068 aagaaatcaagaagtgtgtccggtgtggtaagagaggtcatgttgtagctgattgcaa 28339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 24292804 - 24292968
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |  || ||||    
T  24292804 cagaagatggtcgaggttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggcgagaaaggccacaagagcaacgcctgccctg 24292903  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  24292904 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 24292968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 27205878 - 27205724
Alignment:
Q  4 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |  || ||||| |    
T  27205878 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgcctgccctgagg 27205779  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || |||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  27205778 aaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaa 27205724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 27243350 - 27243504
Alignment:
Q  4 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |  || ||||| |    
T  27243350 aagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgcctgccctgagg 27243449  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || |||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  27243450 aaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaa 27243504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16575149 - 16574985
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  16575149 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 16575050  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| ||||| |||||| | || ||||||||||| ||||||    
T  16575049 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgtggtggctgattgcaatcgtaca 16574985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 16620231 - 16620395
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  16620231 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 16620330  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| ||||| |||||| | || ||||||||||| ||||||    
T  16620331 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgtggtggctgattgcaatcgtaca 16620395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 28312889 - 28312725
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  ||| | |    
T  28312889 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttccg 28312790  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||| ||||||||||||||| |||||| | |||||||||||||| ||||||    
T  28312789 aggaaatcaagaagtgtgcccggtgtggcaagaaaggtcatgtagtagctgattgcaatcgtaca 28312725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 25756640 - 25756799
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| ||||| |||||||||| ||||||||||||  ||||||||| ||| ||||    
T  25756640 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaagtgcaatgtttttccagaag 25756739  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  25756740 agataaagaaatgtgtccggtgcggcaagaagggtcatatagtagctgattgcaagcgta 25756799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 28312255 - 28312187
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28312255 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 28312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 21765068 - 21764974
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcc 98  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  21765068 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcc 21764974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 27190061 - 27189993
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27190061 aggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 27189993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 27259179 - 27259247
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27259179 aggaaagtggtgcagagtttttgtctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 27259247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 28260853 - 28260921
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28260853 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatgatatcttgatgt 28260921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 28285063 - 28284995
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28285063 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatgatatcttgatgt 28284995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 28339602 - 28339670
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28339602 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatgatatcttgatgt 28339670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 29590095 - 29590163
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29590095 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 29590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 25115177 - 25115109
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25115177 aggaaagtggtgcaaagtttttatccactaagcagctgaagcaactggaacgcgatggtatcttgatgt 25115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 27559045 - 27559130
Alignment:
Q  55 tgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtca 140  Q
    |||||||||||||||| |||||||||||| || | |||||||||||| ||| | ||||||||| ||||||||||||||||||||||    
T  27559045 tgtttcaattgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtggcaagaagggtca 27559130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 16574515 - 16574447
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  16574515 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 16574447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16620865 - 16620933
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  16620865 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 16620933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16961138 - 16961206
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||    
T  16961138 aggaaagtggtgcagagttcttatctactaagcagctgaagcaactggaacgtgatggtatattgatgt 16961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 22437126 - 22436988
Alignment:
Q  6 gatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaa 102  Q
    ||||||||||| |||||||||||||||||||||||   |||| |||||||| || || |||||||||| |||||||||||| ||||||| |||||| |      
T  22437126 gatggtcgatgataggcggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtccgggt 22437027  T
Q  103 gagattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    ||| | ||||  ||| |||| ||||| ||||||||||||    
T  22437026 gaggtaaagagatgtttccgatgtggtaagaagggtcat 22436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22828011 - 22828079
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22828011 aggaaagtggtgaagagtttttatctactaagcaggtgaagcaactggaacgcgatgatatcttgatgt 22828079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 2872458 - 2872527
Alignment:
Q  187 aggaaagtggtccagagtttt-tatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  2872458 aggaaagtggtgcagagttttttatctactaagcagctgaagcaactagaacgcgacggtatcttgatgt 2872527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 5836884 - 5836952
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  5836884 aggaaagtggtgcagaattcttatctactaaacagctgaagcaactggaacgcgatggtattttgatgt 5836952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 24293438 - 24293506
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  24293438 aggaaagtggtgcggagtttttatctactaagcagctgatgcaactggaacgtgacggtatcttgatgt 24293506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 27559625 - 27559693
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  27559625 aggaaagtggtgcaaagttcttatctactaagcaggtgaagcaactggaacgcgatggtattttgatgt 27559693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 18404969 - 18405106
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||| | |||||||||||| ||||||||||||   ||| ||||||| ||||||| |||||||| |||||||||||| || |||| ||||||||  |    
T  18404969 atggtcgaagataggcggcctaacaagaaggatgctcctgcaaagattgtctgtttcacttgtggtgagaaaggccacaagagtaatgcttgtcctgggg 18405068  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    |  |||||| |||| | || ||||| ||||||||||||    
T  18405069 atgttaagaggtgttttcgctgtggtaagaagggtcat 18405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16925296 - 16925364
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| || | ||||||||||| |||||||    
T  16925296 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatgtagcgcgatggtattttgatgt 16925364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 22436494 - 22436426
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||||||||| |||||||| |||||||    
T  22436494 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgtgatggtattttgatgt 22436426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 19867312 - 19867244
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||  |||||| || ||||| ||||||||||| ||||| |||||||||||||| |||||||    
T  19867312 aggaaagtggtgtagagttcttgtctaccaagcagctgaaacaactagaacgcgatggtattttgatgt 19867244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 18860033 - 18859874
Alignment:
Q  6 gatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagag 105  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||     
T  18860033 gatggtcgatgataggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtatgccctgaagaa 18859934  T
Q  106 attaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    || ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  18859933 atcaagaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtaca 18859874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 17671342 - 17671506
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || || |    
T  17671342 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaatgtctgcccgg 17671441  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||    
T  17671442 aggaaatcaagaagtgtgtctggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 17671506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22126279 - 22126443
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |  | ||    
T  22126279 cagaggatggtcgatgataggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtcttccttg 22126378  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    |||| || ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  22126379 aagaaatcaagaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtaca 22126443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 19481392 - 19481549
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  ||| |||    
T  19481392 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctg 19481491  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || || |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  19481492 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtcgtagctgattgcaa 19481549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 22117501 - 22117658
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    |||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| || || |||||||| |    
T  22117501 atggtcgatgataggcggcctaagaataaggatgctatagagattgtgtgtttcaatcgtggtgggaaaggccacaaaagcaacgtctgccctgaagaaa 22117600  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  22117601 tcaagaagtgtgttcggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 22117658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 22043285 - 22043126
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| ||   ||||||   |||||||||||||||| |||||||||||| || ||||||||||| ||||    
T  22043285 atggtcgatgataggcggcctaagaagaaggatgctccaactgagattacttgtttcaattgtggtgagaaaggccacaagagtaatgtttgtccagaag 22043186  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22043185 agatcaagaaatgtgttcggtgtggcaagaagggtcatattgtagctgattgcaagcgta 22043126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 19115861 - 19115697
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | |||||||||||| ||||| |  |||||||    
T  19115861 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagaggttgtgtgcttcaattgtggcgagaaaggccacaagagcaacgcctgtcctg 19115762  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||| ||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  19115761 aggaaatcaagaagtgcgtccggtgtggtaagaagggtcatgtggtggctgattgcaatcgtaca 19115697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 20015583 - 20015747
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| || || || || ||||    
T  20015583 cagaagatggtcgatgtgagacggcctaagaagagggatgctgcagagattgtgtgtttcaattgtggtgagaagggccacaagagtaacgtctgccctg 20015682  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || ||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||    
T  20015683 aggaaatcaagaagtgtgttcggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 20015747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 32603603 - 32603448
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||| |||||||||||||||||| |    || ||||| |||||||| |||||||||||||||||||| || |||||||||| |||||    
T  32603603 atggtcgatgataggcgacctaagaagaaggatgctccttcggaaattgtttgtttcaactgtggtgggaaaggccacaagagtaatgtttgtcttgaag 32603504  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaag 159  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32603503 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaag 32603448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 30310467 - 30310624
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||| |||||||||||||||   || || ||||| |||||||| ||||| | |||||||||||| || ||||||||||||||||    
T  30310467 atggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcctgaag 30310566  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  30310567 agatcaagaaatgtgtctggtgtggcaagaagggtcatattgtagctgattgcaagcg 30310624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 22031554 - 22031402
Alignment:
Q  13 gatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagatta 109  Q
    |||| ||||||||||||||||||||||||| |||   |||||   ||||||||||||||||  |||||||| || ||||||||||||||| ||||||| |    
T  22031554 gatgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtga-aaaggccataagagcaatgtttgtcctaaagagataa 22031456  T
Q  110 agaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22031455 agaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 22031402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 15536841 - 15536684
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| |    |||||| | ||||| |||||||| |   |||||||||| || |||||||||||| |||    
T  15536841 atggtcgatgataggcggcctaagaagaaggatgctccttcggagattatttgttttaattgtggcgaagaaggccacaagagtaatgtttgtcctaaag 15536742  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15536741 agatcaagaaatgtgtccggtgtggcaaaaagggtcatattgtagctgattgcaagcg 15536684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 19482026 - 19482094
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19482026 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 19482094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 17671976 - 17672044
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17671976 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 17672044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 19115227 - 19115159
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19115227 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 19115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 20016217 - 20016285
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20016217 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 20016285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22126913 - 22126981
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22126913 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22126981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 18859404 - 18859336
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  18859404 aggaaagtggtgcagagtttttgtcaactaagcagctgaagcaactggaacgcgatggtatcttgatgt 18859336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22118129 - 22118197
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22118129 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22118197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 15536210 - 15536142
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  15536210 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 15536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 22030930 - 22030862
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  22030930 aggaaagtggtgcatagtttttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 22030862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 30311098 - 30311166
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  30311098 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 30311166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 22042654 - 22042586
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  22042654 aggaaagtggtgcagagttcttaactactaagcagctgaagcaaatggaacgcgatggtattttgatgt 22042586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22129571 - 22129639
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||| || |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  22129571 aggaaagtggtgcagaattcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 22129639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 19980794 - 19980726
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||||||||| |||||||| |||||||    
T  19980794 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgggatggtattttgatgt 19980726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21164492 - 21164560
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||| ||| |||||||    
T  21164492 aggaaagtggtgcagagttcttgtctactaagcagctgaagcaattggaacgcgatgatattttgatgt 21164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21391815 - 21391883
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| ||||||||||||||||||||  | ||||| ||||||||||||||||    
T  21391815 aggaaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggtatcttgatgt 21391883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21781141 - 21781209
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| ||||||||||||||||||||  | ||||| ||||||||||||||||    
T  21781141 aggaaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggtatcttgatgt 21781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 32602972 - 32602904
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||| ||||| ||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  32602972 aggaaggtggtgcagagttcttatctactaaacagctgaagcaaatggaacgcgatggtattttgatgt 32602904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21786309 - 21786377
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||| ||||||||||||||||||||  | ||||| |||||||| |||||||    
T  21786309 aggaaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggtattttgatgt 21786377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 21253772 - 21253704
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||  ||||||| ||||| || |||||||    
T  21253772 aggaaagtggcgcagagtttttgtctactaagcagctgaagcagttggaacgtgatggcattttgatgt 21253704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 18880980 - 18881076
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||| | ||| |||||||||||||||||||   ||||| | ||||| ||||| | |||||||| |||||||||||| || |||| ||||||||    
T  18880980 atggtcgaagatagacggcctaagaagaaggatgctcctgcaaaaattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctg 18881076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21920058 - 21920126
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||  | ||||| || ||||| |||||||    
T  21920058 aggaaagtggcgcagagtttttgtctactaagcagctgaagcagttagaacgtgacggtattttgatgt 21920126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 22421858 - 22421914
Alignment:
Q  199 cagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||| || ||||||||||||||||||||| ||||||| ||||| || |||||||    
T  22421858 cagagttcttgtctactaagcagctgaagcaattggaacgtgatggaattttgatgt 22421914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 98
Target Start/End: Complemental strand, 19981426 - 19981331
Alignment:
Q  6 gatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcc 98  Q
    ||||||||| | |||||| || | |||||||||||   |||| |||||||| |  || |||||||||| |||||||||||| ||||||| ||||||    
T  19981426 gatggtcgaagataggcgaccaaggaagaaggatgttcctgctgagattgtcttctttaattgtggtgagaaaggccacaagagcaatgcttgtcc 19981331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 22989849 - 22989804
Alignment:
Q  210 tctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||||||||||||| | ||||| ||||| ||||||||||    
T  22989849 tctactaagcagctgaagcaattagaacgtgatggaatcttgatgt 22989804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22246387 - 22246455
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || | || || ||||||||||||||||||||| | ||||| ||||| || |||||||    
T  22246387 aggaaagtggtgcataattcttgtctactaagcagctgaagcaattagaacgtgatggaattttgatgt 22246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 28984327 - 28984211
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagat--taagaagtgtgtccggtgtggcaagaagggtcatat 143  Q
    |||||||| |||| ||| ||||||| |||||||||||| || |||||||||   ||||||||  || ||||||  || |||||||  |||||||||| |     
T  28984327 gagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgt--ggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacag 28984230  T
Q  144 tgtagctgattgcaagcgt 162  Q
    | ||||||| |||||||||    
T  28984229 tttagctgaatgcaagcgt 28984211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21139398 - 21139559
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||    
T  21139398 cagaggatggtcgatgataggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtggaaaaggccacaaaagcaatgtctgtcgtg 21139497  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgt 162  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  21139498 aagagatcaagaaccgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgt 21139559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 24713060 - 24712896
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  24713060 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 24712961  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  24712960 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 24712896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 24265395 - 24265233
Alignment:
Q  2 agaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || |||||    
T  24265395 agaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctga 24265296  T
Q  102 agagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
     || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  24265295 ggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 24265233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9338608 - 9338444
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  9338608 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 9338509  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  9338508 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 9338444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 9487242 - 9487078
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  9487242 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 9487143  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  9487142 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 9487078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10871876 - 10871719
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  10871876 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagcttgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 10871777  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || || |||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  10871776 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaa 10871719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16984266 - 16984102
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  16984266 cagaagatggtcgatgttaggcggcctaagaagaagaatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 16984167  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  16984166 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 16984102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 22322759 - 22322923
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  22322759 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcggagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 22322858  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||    
T  22322859 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttatagctgattgcaatcgtaca 22322923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 24874167 - 24874330
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||| || | ||    
T  24874167 cagaggatggtcgatgataggcggcctaagaagaaggatgttactgagattgtgtgtttcaactgtggtgggaaaggccacaaaagcaatgtctgccatg 24874266  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24874267 aagaaattaagaaatgtgtccggtgtggcaagaaaggtcatattgtagctgattgcaagcgtac 24874330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 27374295 - 27374131
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  27374295 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 27374196  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| ||||| |||||| | |||||||||||||| ||||||    
T  27374195 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgtggtagctgattgcaatcgtaca 27374131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 44382987 - 44383150
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||  || ||||    
T  44382987 cagaagatggtcgatgttaggcggcctaagaagaaggatgttgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaatgcctgccctg 44383086  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||    
T  44383087 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaatcgtac 44383150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 17002026 - 17001862
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| |  |||||||    
T  17002026 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggcgagaaaggccacaagagcaacgcctgtcctg 17001927  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| | || ||||||||||| ||||||    
T  17001926 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtggtggctgattgcaaccgtaca 17001862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 22462901 - 22463060
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||| ||||||||||||||||||||   || |||||||| |||||||| ||||||| |||||||||||| || ||||||||||||||||    
T  22462901 atggtcgatgataggtggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgtttgtcctgaag 22463000  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  22463001 agatcaagaaatgtgtccagtgtggcaagaagggtcatatcgtagctgattgcaagcgta 22463060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 23116479 - 23116635
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgc---agagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| |   ||||||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  23116479 atggtcgatgataggcggcctaagaagaaggatgctccttcagagattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaag 23116578  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    |||| ||||| |||||||||||| |||||| ||||||||| ||||||||||||||||    
T  23116579 agatcaagaaatgtgtccggtgtagcaagaggggtcatatcgtagctgattgcaagc 23116635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 23205337 - 23205182
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||| ||||| |    |||||||| |||||||| ||||| | |||||||||||| || ||||||||||||||||    
T  23205337 atggtcgatgataggcggcctaagaagaagaatgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcctgaag 23205238  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaag 159  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  23205237 agatcaagaaatgtgtccagtgtggcaagaagggtcatattgtagctgattgcaag 23205182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 23676941 - 23676786
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||| ||||| |    |||||||| |||||||| ||||| | |||||||||||| || ||||||||||||||||    
T  23676941 atggtcgatgataggcggcctaagaagaagaatgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcctgaag 23676842  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaag 159  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  23676841 agatcaagaaatgtgtccagtgtggcaagaagggtcatattgtagctgattgcaag 23676786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 24704920 - 24705061
Alignment:
Q  25 cctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtcc 121  Q
    ||||||||||||||||   |||| |||||| | |||||||||||||||| |||||||||||| ||||||||||||||||| ||| | ||||| ||| |||    
T  24704920 cctaagaagaaggatgttcctgctgagattatctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgaggaggtaaagaaatgtttcc 24705019  T
Q  122 ggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
     |||||||||||||||||| | | ||||||||||||||||||    
T  24705020 agtgtggcaagaagggtcacactttagctgattgcaagcgta 24705061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21143092 - 21143160
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21143092 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 21143160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 9337974 - 9337906
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9337974 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 9337906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 9486608 - 9486540
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9486608 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 9486540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 10871242 - 10871174
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10871242 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 10871174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 16983632 - 16983564
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16983632 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16983564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 17001392 - 17001324
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17001392 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 17001324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22323393 - 22323461
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22323393 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22323461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 24874801 - 24874869
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24874801 aggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 24874869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 27220408 - 27220340
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27220408 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27220340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24678516 - 24678351
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||||| ||| |||||||||||||||||||   |||| |||||||| || || |||||||||| |||||||||||| ||||||| |||||    
T  24678516 cagaggatggtcgatgatagacggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtc 24678417  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    | | |||| ||||||  ||| |||| ||||| ||||||||||||    ||||||| ||||||||||    
T  24678416 cgggagaggttaagagatgtttccgttgtggtaagaagggtcatgcactagctgagtgcaagcgta 24678351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 24657072 - 24657232
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| |  || ||||||||||| |||||||   |||| ||||||   |||||||||||||||| |||||||||||| || | ||||||||    
T  24657072 cagaggatggtcgaggagagacggcctaagaaaaaggatgttcctgctgagattacttgtttcaattgtggtgagaaaggccacaagagtactgtttgtc 24657171  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    |||| ||| | ||||||||| |||||||||||||||||||||| |   |||||||||||||    
T  24657172 ctgaggaggtgaagaagtgtttccggtgtggcaagaagggtcacacattagctgattgcaa 24657232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 24712426 - 24712358
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24712426 aggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 24712358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 27373661 - 27373593
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27373661 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 27373593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 41606436 - 41606504
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41606436 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 41606504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 44383621 - 44383689
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44383621 aggaaagtggtgtagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 44383689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 11351168 - 11351287
Alignment:
Q  41 ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtca 140  Q
    |||| |||||||| |||||||||||||||| |||||||||||| ||||||||||||||  | ||| |  |||| ||| || |||||||||||||||||||    
T  11351168 ctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccaaaggaggtagagaaatgtttctggtgtggcaagaagggtca 11351267  T
Q  141 tattgtagctgattgcaagc 160  Q
    ||   |||||||||||||||    
T  11351268 tacattagctgattgcaagc 11351287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 24264762 - 24264694
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  24264762 aggaaagtggtgcggagtttctatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 24264694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 24657709 - 24657777
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24657709 aggaaagtggagcagagttcttatctactaagcagctgaagcaactggaacgcgatggtattttgatgt 24657777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 24705533 - 24705601
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  24705533 aggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 24705601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 21320423 - 21320517
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcc 98  Q
    |||||||| | |||||||||||||||||||||||   |||| |||||||| ||||| |||||||| | |||||||||||| ||||||| ||||||    
T  21320423 atggtcgaggataggcggcctaagaagaaggatgtccctgctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgtcc 21320517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21323317 - 21323385
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  ||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||    
T  21323317 aggaaagtggcgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 21323385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 23204694 - 23204638
Alignment:
Q  199 cagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  23204694 cagagttcttatctactaagcagttgaagcaaatggaacgcgatggtatcttgatgt 23204638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 24677879 - 24677811
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || |||| |||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  24677879 aggaaagtggtgcaaagttcttatctaccaagcagctgaagcaactggaacacgatggtattttgatgt 24677811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 23028876 - 23029035
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| ||||| | |||||||||||||   || |||||||| ||||| | |||||||| |||||||||||| ||||||| |||||    
T  23028876 cagaggatggtcgaggatagacggccaaggaagaaggatgctcctgctgagattgtctgtttta-ttgtggtgagaaaggccacaagagcaatgcttgtc 23028974  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    ||| |||| | ||||  ||| |||| ||||| ||||||||||||    |||||||||||||    
T  23028975 ctggagaggtaaagagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaa 23029035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 11351800 - 11351839
Alignment:
Q  216 aagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  11351800 aagcagctgaagcaactggaacgcgatggtattttgatgt 11351839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 23039991 - 23040134
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| |||||||||||||||||||   || |||||||||| |||||   |||||||| ||| |||||||| || |||| |||||    
T  23039991 cagaggatggtcgaaggtagacggcctaagaagaaggatgctcctacagagattgtctgtttttcttgtggtgagaagggccacaagagtaatgcttgtc 23040090  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    |||  || |  ||||  ||| |||| ||||| ||||||||||||    
T  23040091 ctggggataccaagagatgtttccgatgtggaaagaagggtcat 23040134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22733825 - 22733893
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||    ||||| |||||||| |||||||    
T  22733825 aggaaagtggcgcagagtttttgtctactaagcagctgaagcagtaagaacgtgatggtattttgatgt 22733893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 23074255 - 23074187
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  || ||||||||||||| ||||||||||||||  | ||||| |||||||| |||||||    
T  23074255 aggaaagtggcgcaaagtttttatctaccaagcagctgaagcagttagaacgtgatggtattttgatgt 23074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 23105779 - 23105847
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| |||||||||||||||||| |  ||||||| ||||| || |||||||    
T  23105779 aggaaagtggcgcagagtttttgtctactaagcagctgaagtagttggaacgtgatggcattttgatgt 23105847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 11351762 - 11351804
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagca 229  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||    
T  11351762 aggaaagtggtgcagagttcttatctaccaagcagctgaagca 11351804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 22733194 - 22733290
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgc---agagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||| | ||| | ||||||||||||||||||| |   ||| ||||| ||||| | |||||||| |||||||||||| || |||| ||||||||    
T  22733194 atggtcgaagatagacagcctaagaagaaggatgctcctccagaaattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctg 22733290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 23065436 - 23065340
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||| | |||||||||||||||||||||||   ||||||||||||| | ||| | || ||||| ||| |||||||| ||| ||  ||||||||    
T  23065436 atggtcgaagataggcggcctaagaagaaggatggtcctgcagagattgtctattttacttatggtgagaagggccacaagagctattcttgtcctg 23065340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 23074886 - 23074790
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||| | |||||||||||||||||||||||   ||||||||||||| | ||| | || ||||| ||| |||||||| ||| ||  ||||||||    
T  23074886 atggtcgaagataggcggcctaagaagaaggatggtcctgcagagattgtctattttacttatggtgagaagggccacaagagctattcttgtcctg 23074790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 33387978 - 33388142
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |    
T  33387978 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtttgcccgg 33388077  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  33388078 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 33388142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 2 - 164
Target Start/End: Complemental strand, 21833711 - 21833549
Alignment:
Q  2 agaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || |||||    
T  21833711 agaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctga 21833612  T
Q  102 agagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
     || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  21833611 ggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 21833549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22400730 - 22400567
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||| ||||| ||||| || ||||    
T  22400730 cagaggatggtcgatgataggcggcctaagaagatggatgctactgagattgtgtgtttcaattgtggagggaaaggccataaaagtaatgtctgccctg 22400631  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22400630 aagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagcggattgcaagcgtac 22400567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 51330441 - 51330605
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| || || ||||    
T  51330441 cagaagatggtcgatgtcaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggagagagaggccacaaaagcaacgtctgccctg 51330540  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  51330541 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtaca 51330605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 21842622 - 21842459
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  21842622 cagaagatggtcgatgatagacggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctg 21842523  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||| ||||||||||| |||||||||||||| || |||||||||||    
T  21842522 aggaaatcaagaagtgtgtccgatgtggcaagaaaggtcatattgtagccgaatgcaagcgtac 21842459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 19109780 - 19109616
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgttt--caattgtggtgggaaaggccacaaaagcaatgtttgtcc 98  Q
    |||| |||||| |||| ||||||||||||||||||||||||| | ||||||||||||||  ||||||| ||| |||||| ||| |||||||||| |||||    
T  19109780 cagaggatggttgatgataggcggcctaagaagaaggatgctaccgagattgtgtgtttttcaattgttgtgtgaaaggtcactaaagcaatgtctgtcc 19109681  T
Q  99 tgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19109680 tgaagagatcaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 19109616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 41350617 - 41350774
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  ||| |||    
T  41350617 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctg 41350716  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || || |||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  41350717 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtcgtagctgattgcaa 41350774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16347544 - 16347698
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||| ||||| |  ||| |||    
T  16347544 cagaagatggtcgacgttaggcggcctaagaagaaggatgctgctgagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgttctg 16347643  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattg 155  Q
    | || || |||||||||||||||||||| |||||||||||| | |||||||||||    
T  16347644 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgtcgtagctgattg 16347698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 17041968 - 17042122
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| |    |||||| | |||||||| ||||| |||||||||||||| || ||||||| ||||||||    
T  17041968 atggtcgatgataggcggcctaagaagaaggatgctccttcggagatttt-tgtttcaactgtggcgggaaaggccacaagagtaatgtttatcctgaag 17042066  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaag 159  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17042067 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaag 17042122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 24784809 - 24784968
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| |||||||||| ||||| |||||||||||| |||||||||||||| || |    
T  24784809 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattatggtgagaaaggccacaagagcaatgtttgtccagagg 24784908  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| |||| |||||||||||||||||||||||  |||||||| ||||||||||    
T  24784909 agataaagaaatgtgcccggtgtggcaagaagggtcatacggtagctgactgcaagcgta 24784968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 21228508 - 21228665
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| |||||||| ||||| | |||||||||||| || |||||||||| || ||    
T  21228508 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcttgtag 21228607  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  21228608 agatcaagaaatgtgtcaggtgtggcaagaagggtcaaattgtagctgattgcaagcg 21228665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 16348178 - 16348246
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16348178 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 16348246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 41351251 - 41351319
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41351251 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 41351319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 51331075 - 51331143
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51331075 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 51331143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 21833078 - 21833010
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21833078 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 21833010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 21839726 - 21839658
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21839726 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 21839658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 160
Target Start/End: Original strand, 22435728 - 22435841
Alignment:
Q  47 agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgt 146  Q
    ||||||| | |||||||||||||| |||||||||||| |||||||||||||| || ||| | ||||| ||| |||| |||||||||||||||||||   |    
T  22435728 agattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtaaagaaatgtttccgatgtggcaagaagggtcatacatt 22435827  T
Q  147 agctgattgcaagc 160  Q
    ||||||||||||||    
T  22435828 agctgattgcaagc 22435841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 19109144 - 19109076
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  19109144 aggaaagtggtgcagagtttttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 19109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 24785440 - 24785508
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24785440 aggaaagtggtgcagagttcttatctactaagcagctgaagcaactggaacgcgatggtattttgatgt 24785508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 33388612 - 33388680
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  33388612 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 33388680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 21176774 - 21176671
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| | |   ||||||| ||| | |||||||||| ||||| |||||| |||||||||||||| ||||    
T  21176774 atggtcgatgataggcggcctaagaagaaggatgctcctgtggagattgtctgtattaattgtggtgagaaagtccacaagagcaatgtttgtccagaag 21176675  T
Q  104 agat 107  Q
    ||||    
T  21176674 agat 21176671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 20081328 - 20081466
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||| |   || |||||||| || || |||||||||| |||||||||||| ||||||| |||||| | ||    
T  20081328 atggtcgatgataggcggcctaagaagaaggatgttcatgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtccgggag 20081427  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcata 142  Q
    || | ||||  ||| | || ||||| |||||||||||||    
T  20081428 aggtaaagagatgttttcgctgtggaaagaagggtcata 20081466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 22502872 - 22502938
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgat 253  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||| |||||||||||||| |||||    
T  22502872 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactagaacgcgatggtattttgat 22502938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 17042598 - 17042666
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||| |||||| |||| |||| |||||||    
T  17042598 aggaaagtggtgcagagttcttatctgctaagcagctgaagcaaatggaacacgatagtattttgatgt 17042666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 21233314 - 21233382
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || ||||  ||||||||| ||||||||||||| || ||||||||||||| |||||||    
T  21233314 aggaaagtggtgcaaagttcgtatctactatgcagctgaagcaaatgaaacgcgatggtattttgatgt 21233382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 20074703 - 20074753
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    ||||||||||||| ||| ||||||| |||||||||||| ||||||||||||    
T  20074703 gagattgtgtgttacaagtgtggtgagaaaggccacaagagcaatgtttgt 20074753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 22359830 - 22359893
Alignment:
Q  190 aaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgat 253  Q
    |||||||| |||||||||| |||||||||||||||||| |  | ||||| |||||||| |||||    
T  22359830 aaagtggtgcagagtttttgtctactaagcagctgaagtagttagaacgtgatggtattttgat 22359893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 21861968 - 21862022
Alignment:
Q  199 cagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgat 253  Q
    ||||||| |||||||| ||||||||||||||| | ||||| ||||| ||||||||    
T  21861968 cagagttcttatctacgaagcagctgaagcaattagaacgtgatggaatcttgat 21862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 22401999 - 22401903
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||| | ||| || ||||||||||||||||||   ||||| ||| | ||||| | |||||||| |||||||||||| || |||| ||||||||    
T  22401999 atggtcgaagatagacgacctaagaagaaggatgctcctgcagaaattttctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctg 22401903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 21751713 - 21751645
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| |||||||| |||||||||||  | ||||| ||||| ||||| ||||    
T  21751713 aggaaagtggcgcagagtttttgtctactaaacagctgaagcagttagaacgtgatggaatcttaatgt 21751645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 10792 - 10629
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  10792 cagaagatggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctg 10693  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  10692 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 10629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 10158 - 10090
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10158 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactgggacgcgatggtatcttgatgt 10090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 19773287 - 19773124
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  19773287 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 19773188  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  19773187 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 19773124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 22329946 - 22330109
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  22329946 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 22330045  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  22330046 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 22330109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 16359829 - 16359665
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  16359829 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 16359730  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  16359729 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 16359665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 34569821 - 34569657
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || || ||||    
T  34569821 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccctg 34569722  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  34569721 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 34569657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29473132 - 29473295
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  29473132 cagaggatggtcgatgataggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctg 29473231  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || ||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||    
T  29473232 aagaaatcaagaagtgtgttcgatgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 29473295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 27521733 - 27521569
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  27521733 cagaagatggtcgatgttaggcggtctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 27521634  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||    
T  27521633 aggaaatcaagaagtgtgtccggtgtggcaagaaagatcatgttgtagctgattgcaatcgtaca 27521569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14996798 - 14996961
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  14996798 cagaagatggttgatgttaggcgacctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 14996897  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  14996898 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 14996961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22351246 - 22351083
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| || || |    
T  22351246 cagaagatggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaactgtggtgggaaaggccacaaaagcaatgtctgccccg 22351147  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  22351146 aagaaatgaagaagtgtgtccggtgtggcaagaaaggtcatattgtagcttaatgcaagcgtac 22351083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 27682459 - 27682622
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  27682459 cagaagatggtcgatgttaggcgtcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 27682558  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| ||||||  ||||||||||||||| |||||    
T  27682559 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgctgtagctgattgcaatcgtac 27682622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 37288555 - 37288718
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || || ||||    
T  37288555 cagaggatggtcgatgataggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctg 37288654  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || |||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||    
T  37288655 aagaaatcaagaagtgtgtccggtgtggcaagaaagttcacattgtagctgaatgcaagcgtac 37288718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 41774169 - 41774006
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||| || || ||||    
T  41774169 cagaagatggtcgatgttaggcggcctaagaagaagaatgctgctgagattgtgtgtttcaattgtggtgagaaaggccacaaaagcaacgtctgccctg 41774070  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | || || |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||    
T  41774069 aggaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgttgtagctgattgcaatcgtac 41774006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 7 - 164
Target Start/End: Complemental strand, 22137989 - 22137832
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    |||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |    
T  22137989 atggtcgatgataggcggcctaagaagaaggatgctattgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtctgccctgaggaaa 22137890  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    | |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  22137889 tcaagaagtgtgtccggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 22137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27613683 - 27613520
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||| |||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| || ||||    
T  27613683 cagaaggtggtcgatgtgagacggcctaagaagagggatgctgcagagattgtgtgtttcaattgtggtgagaagggccacaagagcaatgtctgccctg 27613584  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || |||||||||||||||||||||||||| |||||| | |||||||||||||| |||||    
T  27613583 aagaaatcaagaagtgtgtccggtgtggcaagaaaggtcatgtggtagctgattgcaatcgtac 27613520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 40712107 - 40711943
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |  |||||||    
T  40712107 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgcttcaattgtggtgagaaaggccacaagagcaacgcctgtcctg 40712008  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||| ||||||||||| |||||||||| | | || ||||||||||| ||||||    
T  40712007 aggaaatcaagaagtgcgtccggtgtggtaagaagggtcgtgtggtggctgattgcaatcgtaca 40711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 18782438 - 18782279
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||| || |||||||||||||||||   || |||||||| |||||||| ||||| | |||||||||||| || ||||||||||||||||    
T  18782438 atggtcgatgataggtggtctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgtcctgaag 18782339  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| || || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18782338 agatcaaaaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 18782279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 20803921 - 20803765
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| |||||||||| ||||| |||||||||||| || |||||||| ||||| |    
T  20803921 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattatggtgagaaaggccacaagagaaatgtttgccctgagg 20803822  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    || | ||||| ||| || ||||||||||||||||||||| | ||||||| |||||||    
T  20803821 aggtgaagaaatgtttctggtgtggcaagaagggtcatactttagctgactgcaagc 20803765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 23461295 - 23461139
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || || ||||| | |||||||||||||| |||||||||||| |||||||||||||| || |    
T  23461295 atggtcgatgataggcggcctaagaagaaggatgctcctgcggaaattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagagg 23461196  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    || | ||||| ||| ||||||||||||||||| |||||| | ||||||| |||||||    
T  23461195 aggtgaagaaatgtttccggtgtggcaagaagagtcatactttagctgaatgcaagc 23461139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 27665562 - 27665706
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||| |||||||||||| ||||| |  || ||||    
T  27665562 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagag-------------attgtggtgagaaaggccacaagagcaacgcctgccctg 27665648  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | || || |||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  27665649 aggaaatcaagaagtgtgtccggtgtggtaagaaaggtcatgttgtagctgattgcaa 27665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 16359195 - 16359127
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16359195 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 16359127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 22330580 - 22330648
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22330580 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 22330648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 22350612 - 22350544
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22350612 aggagagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 22350544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 27613049 - 27612981
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27613049 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27612981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 27666183 - 27666251
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27666183 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27666251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 34569187 - 34569119
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34569187 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 34569119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 40711473 - 40711405
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40711473 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 40711405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 41773535 - 41773467
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41773535 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 41773467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 19772653 - 19772585
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  19772653 aggaaagtggtgcagagtttttatctactaagcagttgaagcaactggaacgcgacggtatcttgatgt 19772585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 22137361 - 22137293
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  22137361 aggaaagtggtgcagagtttttatctaccaagcagctgaagcaactggaacgcgacggtatcttgatgt 22137293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 27521099 - 27521031
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27521099 aggaaagtggcgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 27521031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 29473766 - 29473834
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  29473766 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacgatatcttgatgt 29473834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 37289189 - 37289257
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37289189 aggaaagtggtgtagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 37289257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 14997432 - 14997500
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  14997432 aggaaagtggtgcggagtttttatctactaagcagctgaagcaactggaacgcgacagtatcttgatgt 14997500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 18781807 - 18781739
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18781807 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtattttgatgt 18781739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 20803290 - 20803222
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  20803290 aggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacgcgaaggtatcttgatgt 20803222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 21343107 - 21343167
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtat 247  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  21343107 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaacgcgatggtat 21343167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 27683093 - 27683161
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  27683093 aggaaagtggtgcggagtttttatctactaagcagctgaaggaactggaacgcaacggtatcttgatgt 27683161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 21882467 - 21882399
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||||||||| |||||||| |||||||    
T  21882467 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgtgatggtattttgatgt 21882399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 25429733 - 25429648
Alignment:
Q  18 taggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||||||||||||||||| ||   ||||||||||| ||||| | |||||||| |||||||||||| ||||||| ||||||||    
T  25429733 taggcggcctaagaagaaggatactcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagcaatgcttgtcctg 25429648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 23526376 - 23526280
Alignment:
Q  6 gatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcct 99  Q
    ||||||||| | ||| ||||| | |||||||||||||   || |||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||    
T  23526376 gatggtcgaggatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgtcct 23526280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 25429114 - 25429046
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||| ||||||||||||||  | ||||| |||||||| |||||||    
T  25429114 aggaaagtggcgcagagtttttgtctaccaagcagctgaagcagttagaacgtgatggtattttgatgt 25429046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 23078004 - 23078059
Alignment:
Q  41 ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    |||| |||||||| |||||||| |||||||  ||||||||||||||||||| ||||    
T  23078004 ctgctgagattgtatgtttcaagtgtggtgaaaaaggccacaaaagcaatgcttgt 23078059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 23537277 - 23537312
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct 42  Q
    |||||||||| |||||||||||||||||||||||||    
T  23537277 atggtcgatgataggcggcctaagaagaaggatgct 23537312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 22505943 - 22505893
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    |||||||| |||| ||| ||||||| |||||||||||| ||||||||||||    
T  22505943 gagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgt 22505893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 21883062 - 21883005
Alignment:
Q  41 ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcc 98  Q
    |||| |||||||| ||||| |||||||| | |||||||||||| ||||||| ||||||    
T  21883062 ctgctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgtcc 21883005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 118; Significance: 3e-60; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 21419 - 21258
Alignment:
Q  3 gaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaa 102  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| || || |||||     
T  21419 gaagatggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgag 21320  T
Q  103 gagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    || || |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  21319 gaaatcaagaagtgtgtccggtgtggcaagaaaggtcatattgtagctgaatgcaagcgtac 21258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 11891 - 11730
Alignment:
Q  3 gaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaa 102  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| || || |||||     
T  11891 gaagatggtcgatgataggcggcctaagaagaaggatgctactgagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctgag 11792  T
Q  103 gagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    || || |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  11791 gaaatcaagaagtgtgtccggtgtcgcaagaaaggtcatattgtagctgaatgcaagcgtac 11730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 55422 - 55267
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    |||||||||| ||||||||||||||||||||||| | | || |||||||| ||||| |||||||| ||||||||||| ||||||| |||||||||||| |    
T  55422 atggtcgatgataggcggcctaagaagaaggatgtttctgaaattgtgtgcttcaactgtggtggaaaaggccacaagagcaatggttgtcctgaagaaa 55323  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgt 162  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  55322 ttaagaagtgtgtccggtgtggcaagaagggtcatatagtatctgattgcaagcgt 55267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 53517 - 53449
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53517 aggaaagtggtgcaaagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 53449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 11259 - 11191
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11259 aggagagtggtgcagagtttttatctactaagcagctgaagcgactggaacgcgatggtatcttgatgt 11191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 17727 - 17659
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  17727 aggagagtggtgcagagtttttatctactaagcagctgaagcgactggaatgcgatggtatcttgatgt 17659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 22671 - 22507
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| || || || |    
T  22671 cagaagatggtcgatgttaggcggcctaagaagaaggatactgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccccg 22572  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  22571 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 22507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 22037 - 21969
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  22037 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactgaaacgcgacggtatcttgatgt 21969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 7660 - 7496
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| || || || |    
T  7660 cagaagatggtcgatgttaggcggcctaagaagaaggatactgcagagattgtgtgtttcaattgtggtgagaaaggccacaagagcaacgtctgccccg 7561  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtaca 165  Q
    | || || |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||    
T  7560 aggaaatcaagaagtgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaaccgtaca 7496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 112; Significance: 1e-56; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3848 - 3685
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || || ||||    
T  3848 cagaggatggtcgatgataggcggcctaagaagaaggatgctacagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaacgtctgccctg 3749  T
Q  101 aagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgtac 164  Q
    |||| || ||||||||||| |||||||| ||||| |||| |||||||||||| |||||||||||    
T  3748 aagaaatcaagaagtgtgttcggtgtggtaagaaaggtcctattgtagctgaatgcaagcgtac 3685  T

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Target: scaffold0044; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 17581 - 17431
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| |||||||||||||||| |||||||||||| || ||||||||||| ||||    
T  17581 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagtaatgtttgtccagaag 17482  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgatt 154  Q
    |||| ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  17481 agataaagaaatgtgtccggtgtggcaataagggtcatatagtagctgatt 17431  T

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Target: scaffold0044; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 3214 - 3146
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3214 aggaaagtggtgcgaagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 3146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 16950 - 16882
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  16950 aggaaagtggtgcagagttcttatctactaagcagctgaagcaaatggaatgcgatggtattttgatgt 16882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 424729 - 424571
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||| |||||||| |||| |    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  424729 atggtcgatgataggcggcctacgaagaagggtgctcctactgagattgtgtgcttcaactgtggtgtgaaaggccacaaaagcaatgtttgtcctgaag 424630  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgt 162  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  424629 agattaagaaatgtgtccgatgtggcaagaagggtcatattgtagctgattgcaagcgt 424571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 363 - 520
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||||||||||| |    |||||||| |||||||||||||| | |||||||||||| ||||||||||||||||| |    
T  363 atggtcgatgataggcggcctaagaagaaggatgctcctacggagattgtttgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctgagg 462  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  463 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagatgattgcaagcg 520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 49083 - 48928
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    |||| ||||| ||||||||||||||||||||||||| | || ||| |||||||||| | |||||||||||||||||| ||||||| |||||||||||| |    
T  49083 atggccgatgataggcggcctaagaagaaggatgcttctgaaattttgtgtttcaactatggtgggaaaggccacaagagcaatggttgtcctgaagaaa 48984  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgt 162  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  48983 ttaagaagtgtgtccaatgtggcaagaagggtcatatagtagctgattgcaagcgt 48928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 229735 - 229891
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||| ||||||||||||   || |||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  229735 atggtcgatgataggcggcctaataagaaggatgctcctgcggagattgtttgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaag 229834  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    |||| ||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  229835 agataaagaaatgtgtccggtgtggcaagaagggtcatataatagctgattgcaagc 229891  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 251998 - 251948
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    ||||||||||||||||| |||||||  ||||||||||||||| ||| ||||    
T  251998 gagattgtgtgtttcaagtgtggtgaaaaaggccacaaaagctatgcttgt 251948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 13915 - 14074
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||    
T  13915 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccagaag 14014  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| |||||| |||||||||||||||||| ||| |||||||||||||||||||    
T  14015 agataaagaaatgtgtcaggtgtggcaagaagggtcgtatagtagctgattgcaagcgta 14074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 98; Significance: 2e-48; HSPs: 3)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 11239 - 11398
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||| ||||||||||||||||||| |    |||||||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||    
T  11239 atggtcgatgataggcagcctaagaagaaggatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccagaag 11338  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11339 agataaagaaatgtgtccggtgtggcaagaagggtcatatagtagctgattgcaagcgta 11398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 14924 - 15083
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||| ||||||||||||||||||| |    |||||||| ||||| |||||||||| |||||||||||| |||||||||||||| ||||    
T  14924 atggtcgatgataggcagcctaagaagaaggatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgtccagaag 15023  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15024 agataaagaaatgtgtccggtgtggcaagaagggtcatatagtagctgattgcaagcgta 15083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 11870 - 11938
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  11870 aggaaagtggtgtagagttcttatctactaagcagctgaagtaactggaacgcgatggtattttgatgt 11938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 652 - 809
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||| ||||||| |||   |||||   |||||||||||||||| ||||| |||||| || ||||||||||||| ||    
T  652 atggtcgatgataggcggcctaagaagagggatgctccagctgagattacttgtttcaattgtggtgagaaagaccacaagagtaatgtttgtcctgtag 751  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  752 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 5419 - 5262
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| |||||||| ||||| | ||| ||||| || || ||||||||||||||||    
T  5419 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtttgtttcaactgtggcgagaagggccataagagtaatgtttgtcctgaag 5320  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  5319 agatcaagaaatgtgtctggtgtggcaagaagggtcatattgtagctgattgcaagcg 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 91; Significance: 4e-44; HSPs: 9)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 10122 - 10278
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||| |||||||||||||||   || || ||||| |||||||| | ||| |||||||||||||| || ||||||||||||||||    
T  10122 atggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgtcctgaag 10221  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  10222 agatcaagaaatgtgtccggtgtggtaagaagggtcatattgtagctgattgcaagc 10278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 12777 - 12933
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||| |||||||||||||||   || || ||||| |||||||| | ||| |||||||||||||| || ||||||||||||||||    
T  12777 atggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgtcctgaag 12876  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  12877 agatcaagaaatgtgtccggtgtggtaagaagggtcatattgtagctgattgcaagc 12933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 32300 - 32146
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||||| ||||| |||||||| | |||||||||||| ||||||| |||||||| ||    
T  32300 atggtcgatgataggcggcctaagaagaaggatgctcctgctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgtcctggag 32201  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    || | || |  ||| |||||||||| |||||| |||||    |||||||||||||    
T  32200 aggtaaaaagatgtttccggtgtggtaagaagagtcatgcattagctgattgcaa 32146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 31674 - 31606
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || |||||||||||||||| || |||||||||||||||||| |||||||    
T  31674 aggaaagtggtgcagagttcttgtctactaagcagctgatgcgactggaacgcgatggtattttgatgt 31606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 37140 - 37072
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || |||||||||||||||| || |||||||||||||||||| |||||||    
T  37140 aggaaagtggtgcagagttcttgtctactaagcagctgatgcgactggaacgcgatggtattttgatgt 37072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 10752 - 10820
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || | || |||||||||||| || |||||||| |||||||||||||||| |||||||    
T  10752 aggaaagtggtgcaaaattcttatctactaagtagatgaagcaaatggaacgcgatggtattttgatgt 10820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 13407 - 13475
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| || | || |||||||||||| || |||||||| |||||||||||||||| |||||||    
T  13407 aggaaagtggtgcaaaattcttatctactaagtagatgaagcaaatggaacgcgatggtattttgatgt 13475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 37715 - 37612
Alignment:
Q  55 tgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgatt 154  Q
    ||||| |||||||| | |||||||||||| ||||||| |||||||| |||| | || |  ||| |||||||||| |||||| |||||    |||||||||    
T  37715 tgttttaattgtggcgagaaaggccacaagagcaatgcttgtcctggagaggtaaaaagatgtttccggtgtggtaagaagagtcatgcattagctgatt 37616  T
Q  155 gcaa 158  Q
    ||||    
T  37615 gcaa 37612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 54427 - 54363
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttg 251  Q
    ||||||||||  |||||||||| |||||||||||| |||||||  | ||||| ||||| ||||||    
T  54427 aggaaagtggcgcagagtttttgtctactaagcagttgaagcagttagaacgtgatggaatcttg 54363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 14845 - 14686
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| || ||||||||||||||||||||||   || |||||||| |||||||| ||||| | ||| |||||||| || |||||||||| |||||    
T  14845 atggtcgatgatatgcggcctaagaagaaggatgctcctgcggagattgtttgtttcaagtgtggcgagaatggccacaagagtaatgtttgtcttgaag 14746  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14745 agatcaagaaatgtgtccggtgtggcaagaagagtcatattgtagctgattgcaagcgta 14686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 4682 - 4637
Alignment:
Q  210 tctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||||||||||||| | ||||||||||| || |||||||    
T  4682 tctactaagcagctgaagcaattagaacgcgatggaattttgatgt 4637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 300 - 141
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||  ||| |||||||||||||||   || || ||||| |||||||| ||||| |||||||||||||| || ||||||||||||||||    
T  300 atggtcgatgataggaagccaaagaagaaggatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaag 201  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  200 agatcaagaaatgtgtctggtgtggtaagaagggtcatattgtagctgattgcaagcgta 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 86; Significance: 3e-41; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 36919 - 36760
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || ||||| || |||||||||||||||| |||||||||||| |||||||||||||| || |    
T  36919 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagatcgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccagagg 36820  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    || | ||||| ||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  36819 aggtgaagaaatgtttccggtgtggcaagaagggtcatacgttagctgattgcaagcgta 36760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 28868 - 28800
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  28868 aggaaagtggtgcagagttcttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 28800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 36288 - 36229
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggta 246  Q
    ||||||||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  36288 aggaaagtggtgcagagttcttgtttaccaagcagctgaagcaactggaacgcgatggta 36229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 160
Target Start/End: Complemental strand, 154 - 1
Alignment:
Q  10 gtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagaga 106  Q
    ||||||| |||||||||||||||||||||||||   || |||||||| ||||||| |||||||| |||||||||||||||||||||||||||  | |||     
T  154 gtcgatgataggcggcctaagaagaaggatgctcttgcggagattgtctgtttcatttgtggtgagaaaggccacaaaagcaatgtttgtccaaaggagg 55  T
Q  107 ttaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    | ||||| ||| |||||||||||||||||||||||| | |||||||||||||||    
T  54 tgaagaaatgtttccggtgtggcaagaagggtcatactttagctgattgcaagc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 171539 - 171380
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    ||||||| || ||||||||| ||||||||||||||| |||   |||||   |||| ||||||||||| |||||||||||| || ||||||||||||| ||    
T  171539 atggtcgttgataggcggccaaagaagaaggatgctccagttgagattacttgttacaattgtggtgagaaaggccacaagagtaatgtttgtcctgtag 171440  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    |||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  171439 agatcaagaaatgtgttcggtgtggcaagaaaggtcatattgtagctgattgcaagcgta 171380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 271 - 114
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||| |||||||||| ||||||| |||   |||||   || ||||||||||||| |||||||||||| || ||||||||||||| ||    
T  271 atggtcgatgataggcgccctaagaagagggatgctccagttgagattacttgcttcaattgtggtgagaaaggccacaagagtaatgtttgtcctgtag 172  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcg 161  Q
    |||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  171 agatcaagaaatgtgtccggtgtggtaagaagggtcatgttgtagctgattgcaagcg 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 139493 - 139641
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgcag---agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||||||||||||||||| |||| || |||   |||||   || ||||||||||||| |||||||||||| || ||||||||||||| ||    
T  139493 atggtcgatgataggcggcctaagaagagggatactccagctgagattacttgcttcaattgtggtgagaaaggccacaagagtaatgtttgtcctgtag 139592  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctga 152  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  139593 agatcaagaaatgtgtccggtgtggcaagaagggtcatattgtagctga 139641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 209 - 50
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| |    
T  209 atggtcgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtcctgagg 110  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagcgta 163  Q
    || | |||||  || | ||| |||||||||| |||||||   ||| ||||||||||||||    
T  109 aggtgaagaaaagttttcggcgtggcaagaaaggtcatacattagttgattgcaagcgta 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 7707 - 7816
Alignment:
Q  49 attgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtag 148  Q
    ||||| |||||||| ||||| |||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||    
T  7707 attgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgtcctgaagagatcaagaaatgtgtccggtgtggcaagaagggtcatattatag 7806  T
Q  149 ctgattgcaa 158  Q
    ||||||||||    
T  7807 ctgattgcaa 7816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 15462 - 15618
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||||||||||||||||||||||   || |||||  | |||||||||||||||| |||||||||||| |||||| ||||||| || |    
T  15462 atggtcgatgataggcggcctaagaagaaggatgctcctgcggagatcatctgtttcaattgtggtgagaaaggccacaagagcaatttttgtccagagg 15561  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    ||   ||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  15562 aggcaaagaagtgtttccggtgtggcaagaagggtcatacattagctgattgcaagc 15618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 10041 - 10197
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgctgca---gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| ||| ||||||||||||||||||||| |    |||||||| |||||||||||||||| |||||||||||| |||||||||||||  || |    
T  10041 atggtcgatgatagacggcctaagaagaaggatgctcctacggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtctagagg 10140  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    || | ||||| ||| ||||||||||||||||||||||||   |||||||||| ||||    
T  10141 aggtaaagaaatgtttccggtgtggcaagaagggtcatacattagctgattgtaagc 10197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 10672 - 10740
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||    
T  10672 aggaaagtggtgcagagttcttgtctactaagaagctgaagcaactggaacgcgatggtatattgatgt 10740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 8255 - 8323
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8255 aggaaagtggtgcagagtttttatctactaagcagctgaagaaactggaacgcgatggtatcttgatgt 8323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 9730 - 9662
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9730 aggaaagtggtgcagagtttttatctactaagcagctgaagcaactggaacgcgacggtatcttgatgt 9662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 50228 - 50322
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcc 98  Q
    |||||||||| |||||||||||||||||||||||   |||| |||||||| || || |||||||||| |||||||||||||||||||| ||||||    
T  50228 atggtcgatgataggcggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaaaagcaatgcttgtcc 50322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 50859 - 50919
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtat 247  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  50859 aggaaagtggtgcagagttcttgtctactaagcagctgaagcaactagaacgcgatggtat 50919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 37334 - 37402
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  37334 aggaaagtggtgcagagttcttgtctactaagcagctgaagcaactggaacgcgatggtattttgatgt 37402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 36702 - 36840
Alignment:
Q  6 gatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaa 102  Q
    ||||||||| | ||| ||||| | |||||||||||||   || |||||||| ||||| |||||||| | ||||||||| || ||||||| |||||||  |    
T  36702 gatggtcgaggatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggcgagaaaggccataagagcaatgcttgtcctaga 36801  T
Q  103 gagattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    |||||  |||  ||| |||| ||||| ||||||||||||    
T  36802 gagatacagagatgtttccgatgtggtaagaagggtcat 36840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 7540 - 7677
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||| | |||||||||||||||||||||||   |||| |||||||| || || |||||||||| |||||||||||| |||||| ||||||| ||||    
T  7540 atggtcgaagataggcggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatatttgtccggaag 7639  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    || | ||||  | | |||| ||||| ||||||||||||    
T  7640 aggtaaagagatatttccgatgtggtaagaagggtcat 7677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 28826 - 28947
Alignment:
Q  22 cggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtg 118  Q
    |||||||||||||||||||   ||||  |||||   |||||||||||||| | |||||||||||| ||||||||||||||| | ||| | ||||| |||     
T  28826 cggcctaagaagaaggatgttcctgctaagattacctgtttcaattgtggcgagaaaggccacaagagcaatgtttgtcctaaggaggtaaagaaatgtt 28925  T
Q  119 tccggtgtggcaagaagggtca 140  Q
    ||||||||||||||||||||||    
T  28926 tccggtgtggcaagaagggtca 28947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 29442 - 29510
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  29442 aggaaagtggtgcagagttcttatctactaagcagctgaagaaactggagcgcgatggtattttgatgt 29510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 535 - 379
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||| |||||| |||||||||||| |||||   || |||||||| ||||| |||||||||| |||||||||||| |||||||||| |||  |||    
T  535 atggtcgatgataggcgacctaagaagaagaatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttttccgaaag 436  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    || | || |  ||| ||| |||||| ||||||||||||    |||||||||||||||    
T  435 aggtaaaaagatgtttccagtgtggtaagaagggtcatgcattagctgattgcaagc 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 22031 - 21871
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||||| ||| ||||| | |||||||||||||   || |||||||| ||||| |||||||||| |||||||||||| | ||||| |||||    
T  22031 cagaggatggtcgatgatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagatcaatgcttgtc 21932  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    ||  |||||| ||||  ||| |||| ||||| ||||||||||||    |||||||||||||    
T  21931 ctcgagagataaagagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaa 21871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 37455 - 37295
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||||| ||| ||||| | |||||||||||||   || |||||||| ||||| |||||||||| |||||||||||| | ||||| |||||    
T  37455 cagaggatggtcgatgatagacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagatcaatgcttgtc 37356  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    ||  |||||| ||||  ||| |||| ||||| ||||||||||||    |||||||||||||    
T  37355 ctcgagagataaagagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaa 37295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 21394 - 21326
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| |||||||||||||||| ||||||||||||||| |||||||    
T  21394 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaacaggaacgcgatggtatattgatgt 21326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 36818 - 36750
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| |||||||||||||||| ||||||||||||||| |||||||    
T  36818 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaacaggaacgcgatggtatattgatgt 36750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 990 - 1116
Alignment:
Q  22 cggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtg 118  Q
    |||||||||||||||||||   || | ||||||   |||||||||||||| | |||||||| ||| |||| ||||||||| || ||| | ||||| |||     
T  990 cggcctaagaagaaggatgttcctactgagattacctgtttcaattgtggcgagaaaggccgcaagagcattgtttgtccagaggaggtaaagaaatgtt 1089  T
Q  119 tccggtgtggcaagaagggtcatattg 145  Q
    |||||||||||||||||||||||||||    
T  1090 tccggtgtggcaagaagggtcatattg 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 1546 - 1614
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||    
T  1546 aggaaagtggtgtagagtttctatctactaagcagctgaagcaactgcaacgcgatggtattttgatgt 1614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 15508 - 15576
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  15508 aggaaagtggtgcagagttcttatctaccaagcagctgaagcaactggaacgtgatggtattttgatgt 15576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 28009 - 28077
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  28009 aggaaagtggtgcagagttcttatctaccaagcagctgaagcaactgaaacgcgatggtattttgatgt 28077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 619 - 551
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||    
T  619 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 35228 - 35296
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||| |||||||    
T  35228 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactggaacgcgatggtattttgatgt 35296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 41422 - 41354
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  ||||||| || ||||||||||||||||||||| | ||| | ||||| ||||||||||    
T  41422 aggaaagtggcgcagagttcttgtctactaagcagctgaagcaattagaatgtgatggaatcttgatgt 41354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 75142 - 75074
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  ||||||| || ||||||||||||||||||||| | ||| | ||||| ||||||||||    
T  75142 aggaaagtggcgcagagttcttgtctactaagcagctgaagcaattagaatgtgatggaatcttgatgt 75074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 17580 - 17648
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  17580 aggaaagtggtgcagagttcttatctactaagaagctgaagcaattggaacgcgatggtattttgatgt 17648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 17000 - 17085
Alignment:
Q  55 tgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtca 140  Q
    |||||||||||||||| |||||||||||| |||| ||||||||| || ||| | ||||| ||| || |||||||||||||||||||    
T  17000 tgtttcaattgtggtgagaaaggccacaagagcactgtttgtccagaggaggtgaagaaatgtttctggtgtggcaagaagggtca 17085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 195352 - 195412
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtat 247  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||| | ||||||||||||||    
T  195352 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaattagaacgcgatggtat 195412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 3291 - 3131
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| |  || ||||||||||| |||||||   |||| ||||||   | |||||||||||||| |||||||||||| || | || |||||    
T  3291 cagaggatggtcgaggagagacggcctaagaaaaaggatgttcctgctgagattacttctttcaattgtggtgagaaaggccacaagagtactgcttgtc 3192  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    |||| ||| |  |||||||| |||||||||||||||||||||| |   |||||||||||||    
T  3191 ctgaggaggtggagaagtgtttccggtgtggcaagaagggtcacacattagctgattgcaa 3131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 86 - 154
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| |||||||  ||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  86 aggaaagtggtgcagagttcatatctactaagcagctgaagcaaatggaacgagatggtatattgatgt 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 12453 - 12385
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| || ||||| ||||||||||||||||| |||||||||||||| |||||||    
T  12453 aggaaagtggtgcagagttcttgtctaccaagcagctgaagcaactagaacgcgatggtattttgatgt 12385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 345 - 252
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||||||| | ||| |||||||||||||||||||   |||| |||||||| || || |||||||||| |||||||||||| ||||||| |||||    
T  345 atggtcgaggatagacggcctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaaggccacaagagcaatgcttgtc 252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 255 - 356
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| |||||||||||||||||||||   ||||||||||| ||||| | |||||||| |||||||||||| || |||| |||||    
T  255 cagaggatggtcgaagatagacggcctaagaagaaggatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtc 354  T
Q  98 ct 99  Q
    ||    
T  355 ct 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 11684 - 11591
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||||||| | |||||||||||||||||||||||||   ||||||||||| ||||| | |||||||| |||||||||||| || |||| |||||    
T  11684 atggtcgaagataggcggcctaagaagaaggatgctcatgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtc 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 14505 - 14367
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||| ||| |||||||||||||||||||||||   ||||||||||||| ||||| | |||||| | ||||||||| || || |||| ||||| ||  |    
T  14505 atggtcaatgataggcggcctaagaagaaggatgctcctgcagagattgtctgttttacttgtggcgagaaaggccataagagtaatgcttgtcttgggg 14406  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcata 142  Q
    |  ||||||  ||| | || ||||| |||||||||||||    
T  14405 atgttaagagatgttttcgctgtggaaagaagggtcata 14367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 9326 - 9422
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctg 100  Q
    |||||||| | |||||||||| ||||||||||||||   ||||||||||| ||||| | |||||||| |||||||||||| || |||| ||||||||    
T  9326 atggtcgaagataggcggccttagaagaaggatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgtcctg 9422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 467 - 367
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||||||||| | |||||||||||   |||| |||||||| ||||| |||||||||| |||||||||||| ||||||| |||||    
T  467 cagaggatggtcgaagataggcggccaaggaagaaggatgttcctgctgagattgtttgttttaattgtggtgagaaaggccacaagagcaatgcttgtc 368  T
Q  98 c 98  Q
    |    
T  367 c 367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 30451 - 30611
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||  ||||| | |||||||||||||   || |||||||| ||||| |||||||||| |||||||||||| ||||||| |||||    
T  30451 cagaggatggtcgaggataaacggccaaggaagaaggatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgtc 30550  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaa 158  Q
    | | |||| | ||||  ||| |||| ||||| ||||||||||||    |||||||||||||    
T  30551 caggagaggtaaagagatgtttccgatgtggtaagaagggtcatgcactagctgattgcaa 30611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 151871 - 151803
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||  ||||||| ||||| || |||||||    
T  151871 aggaaagtggcgcagagtttttgtctactaagcagctgaagcagttggaacgtgatggcattttgatgt 151803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 2031 - 2087
Alignment:
Q  199 cagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||| ||||||||||| |||||||||||| | ||||| |||||||| |||||||    
T  2031 cagagttcttatctactaaacagctgaagcaattagaacgtgatggtattttgatgt 2087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 47478 - 47546
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||  ||||||||||||||||||||  | ||||| ||||| ||||| ||||    
T  47478 aggaaagtggcgcagagttttagtctactaagcagctgaagcagttagaacgtgatggaatcttaatgt 47546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 511 - 406
Alignment:
Q  55 tgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgatt 154  Q
    |||||||||||||||| |||||||||||| || | || ||||| ||| ||| | ||| ||||| |||||||||||||||||||||| |   ||| |||||    
T  511 tgtttcaattgtggtgagaaaggccacaagagtactgcttgtcgtgaggaggtgaaggagtgtttccggtgtggcaagaagggtcacacattagttgatt 412  T
Q  155 gcaagc 160  Q
    ||||||    
T  411 gcaagc 406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 30708 - 30570
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||| | ||||||| |||||||||||||||   |||| |||||||| || || |||||||||| ||||| |||||| ||||||| |||||| | ||    
T  30708 atggtcgaggataggcggtctaagaagaaggatgttcctgctgagattgtctgctttaattgtggtgagaaagaccacaagagcaatgcttgtccgggag 30609  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcata 142  Q
    || | ||||  ||| | || ||||| |||||||||||||    
T  30608 aggtaaagagatgttttcgctgtggtaagaagggtcata 30570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 52439 - 52507
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||||  |||||| || ||||| |||||||||||||| ||||||||||||||||| |||||||    
T  52439 aggaaagtggtgtagagttcttgtctaccaagcagctgaagcagctggaacgcgatggtatgttgatgt 52507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 122059 - 122138
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaa 83  Q
    |||||||||| |||||||||||||||||||||||||   || ||||||   ||||||||||||||||  |||||||||||    
T  122059 atggtcgatgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaattgtggtgaaaaaggccacaa 122138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 17857 - 17925
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||  ||||||| ||||| || |||||||    
T  17857 aggaaagtggcgcagagtttttgtctactaagcagctgaagcagttggaacgtgatggcattttgatgt 17925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 17226 - 17369
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| || ||||||||||||||||   || |||||||||| |||||   |||||||| ||| |||||||| || |||| |||||    
T  17226 cagaggatggtcgaagatagacgacctaagaagaaggatgctcctacagagattgtttgtttttcttgtggtgagaagggccacaagagtaatgcttgtc 17325  T
Q  98 ctgaagagattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    |||  || |  ||||  ||| |||| ||||| ||||||||||||    
T  17326 ctggggataccaagagatgtttccgatgtgggaagaagggtcat 17369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 8644 - 8507
Alignment:
Q  7 atggtcgatgttaggcggcctaagaagaaggatg---ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtcctgaag 103  Q
    |||||||||  |||||||||||||||||||||||   ||||| ||||||| || || | |||||||  |||||||||||| || |||| |||||||   |    
T  8644 atggtcgataataggcggcctaagaagaaggatgctcctgcaaagattgtctgctttacttgtggtcagaaaggccacaagagtaatgcttgtcctaggg 8545  T
Q  104 agattaagaagtgtgtccggtgtggcaagaagggtcat 141  Q
    |  |||||| |||| | || ||||| ||||||||||||    
T  8544 atgttaagaggtgttttcgctgtggaaagaagggtcat 8507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 8013 - 7945
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| || | |||||||||||||||  | ||||| |||||||| |||||||    
T  8013 aggaaagtggcgcagagtttttgtcaattaagcagctgaagcagttagaacgtgatggtattttgatgt 7945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 17666 - 17600
Alignment:
Q  189 gaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||  |||||||||| ||||||||| ||||||||||| | ||||||||||| || |||||||    
T  17666 gaaagtggagcagagtttttgtctactaagtagctgaagcaattagaacgcgatggaattttgatgt 17600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 111421 - 111489
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||  | ||||| ||||| ||||| ||||    
T  111421 aggaaagtggcgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggaatcttaatgt 111489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 4224 - 4156
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||  | ||||  ||||| ||||||||||    
T  4224 aggaaagtggcacagagtttttgtctactaagcagctgaagcagttagaacatgatggaatcttgatgt 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 318 - 216
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| ||||| |||||||||||||||   ||||||||||| |||||   |||||||| ||| |||||||| || |||| |||||    
T  318 cagaggatggtcgaagatagacggccaaagaagaaggatgctcctgcagagattgtttgtttttcttgtggtgagaagggccacaagagtaatgcttgtc 219  T
Q  98 ctg 100  Q
    |||    
T  218 ctg 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 12728 - 12795
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||| ||||||| | |||||||||||||||||||||  | ||||| ||||| ||||||||||    
T  12728 aggaaagtggtgcagagttct-atctactaagcagctgaagcagttagaacgtgatggaatcttgatgt 12795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 24462 - 24526
Alignment:
Q  190 aaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatg 254  Q
    |||||||| |||||||||| ||||||||||||||||||||  | ||||| ||||| || ||||||    
T  24462 aaagtggtgcagagtttttgtctactaagcagctgaagcagttagaacgtgatggaattttgatg 24526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 25226 - 25294
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||||||||||||||||||  ||||| | ||||| || |||||||    
T  25226 aggaaagtggcgcagagtttttgtctactaagcagctgaagcagttggaatgtgatggcattttgatgt 25294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 104017 - 103949
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  |||||||||| ||||| ||||||||||||||| | ||||| ||||| || |||||||    
T  104017 aggaaagtggcgcagagtttttgtctaccaagcagctgaagcaattagaacgtgatggaattttgatgt 103949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 1224 - 1279
Alignment:
Q  41 ctgcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    |||| |||||||| |||| ||| ||||||| |||||||||||| ||||||||||||    
T  1224 ctgctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgt 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 310 - 361
Alignment:
Q  204 tttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||| ||||| ||||||||||||||||| |||||| ||||||| |||||||    
T  310 tttttgtctaccaagcagctgaagcaactagaacgcaatggtattttgatgt 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 5901 - 5846
Alignment:
Q  189 gaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatgg 244  Q
    ||||||||  ||||||| |||||||||||||||||||||||| | ||||| |||||    
T  5901 gaaagtggagcagagttcttatctactaagcagctgaagcaattagaacgtgatgg 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 69366 - 69461
Alignment:
Q  65 gtggtgggaaaggccacaaaagcaatgtttgtcctgaagagattaagaagtgtgtccggtgtggcaagaagggtcatattgtagctgattgcaagc 160  Q
    |||||| |||||||||||| ||||||| |||||| |||||| | || |  ||| ||| |||||| ||||||||||||    |||||||||||||||    
T  69366 gtggtgagaaaggccacaagagcaatgcttgtccggaagaggtaaaaagatgtttccagtgtggtaagaagggtcatgcattagctgattgcaagc 69461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8641 - 8540
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatgct---gcagagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgtc 97  Q
    |||| ||||||||| | ||| ||||| ||||||||||| |||   || |||||| | ||||| |||||||| | |||||||||||| ||||||| |||||    
T  8641 cagaggatggtcgaggatagacggccaaagaagaaggacgctcttgctgagattatctgttttaattgtggcgagaaaggccacaagagcaatgcttgtc 8542  T
Q  98 ct 99  Q
    ||    
T  8541 ct 8540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 107654 - 107693
Alignment:
Q  1 cagaagatggtcgatgttaggcggcctaagaagaaggatg 40  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  107654 cagaagatggtcgatgataggcggcctaagaagaaagatg 107693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 3391 - 3349
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagca 229  Q
    ||||||||||  ||||||||||||||||||| |||||||||||    
T  3391 aggaaagtggcgcagagtttttatctactaaacagctgaagca 3349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 514278 - 514328
Alignment:
Q  46 gagattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    |||||||| |||| ||| ||||||| |||||||||||| ||||||||||||    
T  514278 gagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgt 514328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 6663 - 6606
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatgg 244  Q
    ||||||||||  ||||||| |||||||| ||||||||||||||| | ||||| |||||    
T  6663 aggaaagtggcacagagttcttatctaccaagcagctgaagcaattagaacgtgatgg 6606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 13793 - 13736
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatgg 244  Q
    ||||||||||  ||||||| |||||||| ||||||||||||||| | ||||| |||||    
T  13793 aggaaagtggcacagagttcttatctaccaagcagctgaagcaattagaacgtgatgg 13736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 30312 - 30263
Alignment:
Q  47 agattgtgtgtttcaattgtggtgggaaaggccacaaaagcaatgtttgt 96  Q
    ||||||| |||| ||| ||||||| |||||||||||||||||| ||||||    
T  30312 agattgtttgttacaagtgtggtgagaaaggccacaaaagcaacgtttgt 30263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 660 - 604
Alignment:
Q  199 cagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    |||||||||| ||||||||||||||||||||  | ||||| ||||| || |||||||    
T  660 cagagtttttgtctactaagcagctgaagcagttagaacgtgatggaattttgatgt 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 7173 - 7241
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||   ||| ||||| ||||||||||||||||||||  | ||||| |||||||| |||||||    
T  7173 aggaaagtggcggagaatttttgtctactaagcagctgaagcagttagaacgtgatggtattttgatgt 7241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 18440 - 18400
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaag 227  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  18440 aggaaagtggcgcagagtttttgtctactaagcagctgaag 18400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 1242 - 1174
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||   ||||||||| |||||||||||| |||||||  | ||||| ||||| ||||||||||    
T  1242 aggaaagtggcgtagagtttttgtctactaagcagttgaagcagttagaacgtgatggaatcttgatgt 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 6601 - 6669
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||   |||||| |||||||||||||||||||||||  | ||||| ||||| || |||||||    
T  6601 aggaaagtggcgtagagttcttatctactaagcagctgaagcagttagaacgtgatggaattttgatgt 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 55984 - 56052
Alignment:
Q  187 aggaaagtggtccagagtttttatctactaagcagctgaagcaactggaacgcgatggtatcttgatgt 255  Q
    ||||||||||  || ||||||| |||||||| |||||||||||  | ||||| |||||||| |||||||    
T  55984 aggaaagtggcgcaaagtttttgtctactaaacagctgaagcagttagaacgtgatggtattttgatgt 56052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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