View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8909_low_49 (Length: 241)

Name: NF8909_low_49
Description: NF8909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8909_low_49
NF8909_low_49
[»] chr2 (9 HSPs)
chr2 (122-227)||(33732655-33732760)
chr2 (122-227)||(44958199-44958305)
chr2 (122-214)||(16089920-16090012)
chr2 (125-227)||(3830900-3831002)
chr2 (122-215)||(37498862-37498956)
chr2 (122-227)||(6376238-6376343)
chr2 (143-227)||(14573081-14573166)
chr2 (121-227)||(37914235-37914341)
chr2 (122-227)||(36315647-36315753)
[»] chr3 (16 HSPs)
chr3 (120-227)||(46111941-46112049)
chr3 (122-221)||(29472901-29473000)
chr3 (122-227)||(21559647-21559753)
chr3 (122-227)||(48200771-48200877)
chr3 (122-227)||(51339783-51339888)
chr3 (122-227)||(34749897-34750003)
chr3 (122-220)||(30735495-30735594)
chr3 (124-227)||(36749492-36749596)
chr3 (122-227)||(36370337-36370443)
chr3 (122-227)||(44000075-44000181)
chr3 (123-227)||(22894766-22894870)
chr3 (122-227)||(39467101-39467206)
chr3 (120-175)||(38231430-38231486)
chr3 (119-227)||(39072275-39072378)
chr3 (122-167)||(50966265-50966310)
chr3 (122-167)||(51069400-51069445)
[»] chr7 (21 HSPs)
chr7 (122-227)||(28307494-28307600)
chr7 (122-227)||(34828151-34828256)
chr7 (122-228)||(26972202-26972309)
chr7 (120-227)||(36346562-36346669)
chr7 (122-227)||(34108512-34108618)
chr7 (122-227)||(45782659-45782765)
chr7 (122-227)||(31148376-31148481)
chr7 (122-220)||(42220963-42221061)
chr7 (124-227)||(30887786-30887890)
chr7 (121-227)||(7699881-7699988)
chr7 (121-227)||(7700079-7700186)
chr7 (121-227)||(7700277-7700384)
chr7 (121-227)||(7700475-7700582)
chr7 (122-227)||(5811163-5811268)
chr7 (122-215)||(29953571-29953665)
chr7 (122-227)||(46475110-46475216)
chr7 (122-215)||(13108245-13108338)
chr7 (122-227)||(36957515-36957619)
chr7 (124-227)||(21807324-21807427)
chr7 (122-197)||(42950036-42950111)
chr7 (182-227)||(23980217-23980262)
[»] chr8 (10 HSPs)
chr8 (122-227)||(18184639-18184744)
chr8 (122-227)||(30432425-30432530)
chr8 (122-227)||(31318891-31318997)
chr8 (122-225)||(43186115-43186218)
chr8 (119-227)||(10203750-10203859)
chr8 (122-220)||(12665438-12665537)
chr8 (122-227)||(42162684-42162790)
chr8 (122-227)||(36189302-36189406)
chr8 (130-227)||(44081866-44081964)
chr8 (120-227)||(33726097-33726205)
[»] chr4 (9 HSPs)
chr4 (122-227)||(44275792-44275897)
chr4 (122-228)||(28093095-28093202)
chr4 (122-213)||(49243915-49244006)
chr4 (119-227)||(21390952-21391060)
chr4 (122-227)||(7217851-7217957)
chr4 (122-227)||(6112716-6112821)
chr4 (124-220)||(35545005-35545102)
chr4 (122-227)||(3672360-3672466)
chr4 (122-227)||(46192445-46192551)
[»] chr5 (12 HSPs)
chr5 (120-227)||(39371013-39371121)
chr5 (120-227)||(2237362-2237470)
chr5 (122-225)||(31800646-31800749)
chr5 (122-227)||(40887941-40888047)
chr5 (122-227)||(42683685-42683791)
chr5 (122-225)||(13347216-13347320)
chr5 (122-227)||(14831630-14831736)
chr5 (121-227)||(1815618-1815721)
chr5 (142-227)||(9408058-9408144)
chr5 (125-227)||(27553376-27553478)
chr5 (182-213)||(19124532-19124563)
chr5 (181-227)||(17225403-17225449)
[»] chr1 (6 HSPs)
chr1 (122-223)||(34307137-34307239)
chr1 (122-227)||(2509110-2509216)
chr1 (124-227)||(39249864-39249968)
chr1 (122-227)||(46901734-46901840)
chr1 (119-227)||(19258669-19258777)
chr1 (122-225)||(28647441-28647544)
[»] chr6 (6 HSPs)
chr6 (122-227)||(13697654-13697759)
chr6 (122-227)||(3986905-3987010)
chr6 (122-225)||(3118046-3118150)
chr6 (122-227)||(24208530-24208635)
chr6 (122-225)||(15345659-15345762)
chr6 (123-227)||(14023020-14023124)
[»] scaffold0062 (1 HSPs)
scaffold0062 (119-227)||(6804-6913)
[»] scaffold0043 (1 HSPs)
scaffold0043 (122-199)||(87162-87239)


Alignment Details
Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 33732760 - 33732655
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||| |||||    
T  33732760 ggaaaaagataggtagacaccctttttcatacacctcttatgtacaccccatatattaggggtattttagtaattttacatcatatcaccaccctttttc 33732661  T
Q  222 atctct 227  Q
    ||||||    
T  33732660 atctct 33732655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 44958305 - 44958199
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||| ||  ||||||||||||||||||||||||||||||||||| ||||    
T  44958305 ggaaaaagataggtagacatcctttttcatacacctcttatgtataccctcatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 44958206  T
Q  221 catctct 227  Q
     ||||||    
T  44958205 tatctct 44958199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 16090012 - 16089920
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacc 214  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  16090012 ggaaaaagataggtagacaccttttttcatacacctcttatgtacaccccatgtgttaggggtattttagtaattttacatcatatcaccacc 16089920  T

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Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 3830900 - 3831002
Alignment:
Q  125 aaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttcatc 224  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||| ||  |||||| ||||||||||||||||| || ||||||  ||||||||    
T  3830900 aaaagataggtagacaccctttttcatacacctcttatgtacaccccatgtgttaggggtatattagtaattttacatcagataatcaccacttttcatc 3830999  T
Q  225 tct 227  Q
    |||    
T  3831000 tct 3831002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 37498862 - 37498956
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtaca-ccccatgtattctgggtattttagtaattttacatcatatcatcaccc 215  Q
    ||||||||||||||||||| | ||||| ||||||| |||||||||| |||||||| ||  |||||||||||||||||||||||||||||||||||    
T  37498862 ggaaaaagataggtagacacccttttttatacacctcttatgtacatccccatgtgttaggggtattttagtaattttacatcatatcatcaccc 37498956  T

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Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 6376238 - 6376343
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||||| ||||| ||||||| |  ||||||| | ||||| ||   |||||||||||||||| |||||| ||| ||||||||||||    
T  6376238 ggaaaaagataggtagacatccttttttatacacctcccatgtacatctcatgtgttagaggtattttagtaatttcacatcacatcctcacccattttc 6376337  T
Q  222 atctct 227  Q
    ||||||    
T  6376338 atctct 6376343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 14573166 - 14573081
Alignment:
Q  143 atttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccattttcatctct 227  Q
    ||||| |||||||| |||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  14573166 attttacatacacctcttatgtacacccccatgtgttaggggtattttagtaattttacatcatatcatcacccttttccatctct 14573081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 37914235 - 37914341
Alignment:
Q  121 tggaaaaagataggtagacatcatttttc-atacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattt 219  Q
    |||||||||||||||||||| | |||||  ||||||| |||||||||||||||||||  | |||||||||| | |||| |||||| || ||||||| |||    
T  37914235 tggaaaaagataggtagacacccttttttgatacacctcttatgtacaccccatgta-ccagggtattttaatcatttcacatcacattatcaccccttt 37914333  T
Q  220 tcatctct 227  Q
    | ||||||    
T  37914334 ttatctct 37914341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 36315753 - 36315647
Alignment:
Q  122 ggaaaaagataggtagacatcatttttc-atacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| |||||  ||||||| |||||||||||| ||||| |   |||||||||| | |||| |||||| || ||||||  ||||    
T  36315753 ggaaaaagataggtagacatccttttttgatacacctcttatgtacacctcatgtgtcaggggtattttaatcatttcacatcacattatcacctctttt 36315654  T
Q  221 catctct 227  Q
     ||||||    
T  36315653 tatctct 36315647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 46111941 - 46112049
Alignment:
Q  120 atggaaaaagataggtagacatcatttttcatacaccacttatgtaca-ccccatgtattctgggtattttagtaattttacatcatatcatcacccatt 218  Q
    ||||||||||||||||||||| |||||||||||||||  |||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||| ||    
T  46111941 atggaaaaagataggtagacaccatttttcatacaccttttatatacatccccatgtattaggggtattttagtaattttacatcatatcatcacccttt 46112040  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  46112041 ttcatctct 46112049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 29473000 - 29472901
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||||| || |||||    
T  29473000 ggaaaaagataggtagacatcctttttcatacaccacttatgcacaccccatgtgttaggggtattttagtaattttacatcatatcatcatcccttttc 29472901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 21559753 - 21559647
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||| |||| ||  |||||||||||||||||||||||||||||| |||| ||||    
T  21559753 ggaaaaagatagatagacaccatttttcatacacctcttatgtacacccccatgtgttaggggtattttagtaattttacatcatatcattacccttttt 21559654  T
Q  221 catctct 227  Q
    |||||||    
T  21559653 catctct 21559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 48200877 - 48200771
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| || ||||    
T  48200877 ggaaaaagataggtagacatcctttttcatacactttttatgtacacccccatgtattatgggtatttgagtaattttacatcatatcatcatccttttt 48200778  T
Q  221 catctct 227  Q
    |||||||    
T  48200777 catctct 48200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 51339783 - 51339888
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||  ||||| ||   |||||||||||||||||||||||||||||||||| |||||    
T  51339783 ggaaaaagataggtagacaccctttttcatacacctcttatgtacacatcatgtgttagaggtattttagtaattttacatcatatcatcaccctttttc 51339882  T
Q  222 atctct 227  Q
    ||||||    
T  51339883 atctct 51339888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 34749897 - 34750003
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||  ||||||| ||||||||||||  |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  34749897 ggaaaaagatagccagacatcctttttcatacacttcttatgtacacccctatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 34749996  T
Q  221 catctct 227  Q
    |||||||    
T  34749997 catctct 34750003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 30735495 - 30735594
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggta-ttttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||  ||||| |||||||||||| ||||||||||||||||| ||||    
T  30735495 ggaaaaagataggtagacaccctttttcatacaccacttatgtacactccatgtgttaggggtatttttagtaatttaacatcatatcatcacccttttt 30735594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 36749596 - 36749492
Alignment:
Q  124 aaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccattttca 222  Q
    |||||||||||||||||   ||||||||||||   |||||||||||| ||||||||   ||||||| |||||||||||||||||||||||||| ||||||    
T  36749596 aaaaagataggtagacactctttttcatacactttttatgtacaccctcatgtattagaggtatttgagtaattttacatcatatcatcaccctttttca 36749497  T
Q  223 tctct 227  Q
    |||||    
T  36749496 tctct 36749492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 36370337 - 36370443
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||| |   ||||||||||||   |||| ||||||| ||||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  36370337 ggaaaaagataggtagatactctttttcatacactttttatatacaccctcatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 36370436  T
Q  221 catctct 227  Q
    |||||||    
T  36370437 catctct 36370443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 44000181 - 44000075
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    |||||||||||||||||||   ||||||||||||   |||||||| ||| ||||||||   ||||||| |||||||||||||||||||||||||| ||||    
T  44000181 ggaaaaagataggtagacactctttttcatacactttttatgtacgccctcatgtattagaggtatttgagtaattttacatcatatcatcacccttttt 44000082  T
Q  221 catctct 227  Q
    |||||||    
T  44000081 catctct 44000075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 22894870 - 22894766
Alignment:
Q  123 gaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||| |||||| | |||| |||||||  ||||||||||||| ||||||||  |||||||| ||||||| ||||||||||||||| || |||||    
T  22894870 gaaaaagatagatagacaccctttt-catacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttc 22894772  T
Q  222 atctct 227  Q
    ||||||    
T  22894771 atctct 22894766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 39467101 - 39467206
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||| ||| | ||||| ||||||| |  ||||||||| ||||| || ||| |||||||||||||| | |||| ||| |||||| |||||    
T  39467101 ggaaaaagataggtacacacccttttttatacacctcccatgtacacctcatgtgttatggatattttagtaatttcatatcacatcctcaccccttttc 39467200  T
Q  222 atctct 227  Q
    ||||||    
T  39467201 atctct 39467206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 38231486 - 38231430
Alignment:
Q  120 atggaaaaagataggtagacat-catttttcatacaccacttatgtacaccccatgt 175  Q
    |||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||||    
T  38231486 atggaaaaagataggtagacatccttttttgatacacctcttatgtacaccccatgt 38231430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 39072275 - 39072378
Alignment:
Q  119 tatggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccatt 218  Q
    ||||||||||||||||||||||   ||||| ||||| |  | ||||||||||||||| |   ||||||||||||||     ||||| |||||||||||||    
T  39072275 tatggaaaaagataggtagacacacttttttatacatctttgatgtacaccccatgtgtcaagggtattttagtaa-----catcacatcatcacccatt 39072369  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  39072370 ttcatctct 39072378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 50966310 - 50966265
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtaca 167  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||    
T  50966310 ggaaaaagataggtagacattctttttcatacacctcttatgtaca 50966265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 51069445 - 51069400
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtaca 167  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||    
T  51069445 ggaaaaagataggtagacattctttttcatacacctcttatgtaca 51069400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 28307494 - 28307600
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||| || | ||  ||||||||||||||||||||||||||||||||||| ||||    
T  28307494 ggaaaaagataggtagacatcttttttcatacacctcttatgtacacccccatatgttaagggtattttagtaattttacatcatatcatcacccttttt 28307593  T
Q  221 catctct 227  Q
    |||||||    
T  28307594 catctct 28307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 34828256 - 34828151
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| | ||  |||||||||||||||||||||||||||||||| |  |||||    
T  34828256 ggaaaaagataggtagacatcctttttcatacaccacttatgcacaccccatatgttaggggtattttagtaattttacatcatatcatcatcacttttc 34828157  T
Q  222 atctct 227  Q
    ||||||    
T  34828156 atctct 34828151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 26972202 - 26972309
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||||||||||  |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  26972202 ggaaaaagataggtagacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 26972301  T
Q  221 catctctc 228  Q
    ||||||||    
T  26972302 catctctc 26972309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 36346562 - 36346669
Alignment:
Q  120 atggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatt 218  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||| || ||    
T  36346562 atggaaaaagataggtagacaccctttttcatacacctcttatgtacaccctcatgtgttaggggtattttagtaattttacatcatatcatca-ccttt 36346660  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  36346661 ttcatctct 36346669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 34108618 - 34108512
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacac-cccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||| ||| | ||||||||||||  ||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  34108618 ggaaaaagataggtaaacaccctttttcatacacttcttatgtacactcccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 34108519  T
Q  221 catctct 227  Q
    |||||||    
T  34108518 catctct 34108512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 45782659 - 45782765
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacac-cccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||| ||||||   |||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||| ||||    
T  45782659 ggaaaaagataggtagacacccttttttatacactttttatgtacactcccatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 45782758  T
Q  221 catctct 227  Q
    |||||||    
T  45782759 catctct 45782765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 31148481 - 31148376
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    |||||||||||||||||||   ||||||||||||| |||||  ||||||||| | ||  |  ||||||||||||||||||||||||||||||||||||||    
T  31148481 ggaaaaagataggtagacactctttttcatacacctcttatacacaccccatatgttaggcttattttagtaattttacatcatatcatcacccattttc 31148382  T
Q  222 atctct 227  Q
    ||||||    
T  31148381 atctct 31148376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 42220963 - 42221061
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggta-ttttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||  ||||| |||||||||||| ||||||||||||||||| ||||    
T  42220963 ggaaaaagataggtagacacc-tttttcatacaccacttatgtacactccatgtgttaggggtatttttagtaatttaacatcatatcatcacccctttt 42221061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Complemental strand, 30887890 - 30887786
Alignment:
Q  124 aaaaagataggta-gacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttca 222  Q
    ||||||||| ||| |||| | ||||||||||||  ||||| |||||||||||||||   ||||||| |||||||||||||||||||||||||| ||||||    
T  30887890 aaaaagatacgtaagacaccctttttcatacacttcttatatacaccccatgtattagaggtatttaagtaattttacatcatatcatcaccctttttca 30887791  T
Q  223 tctct 227  Q
    |||||    
T  30887790 tctct 30887786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 7699881 - 7699988
Alignment:
Q  121 tggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccattt 219  Q
    |||||||||||||||| ||| | ||||||||||||| ||||| ||||||  ||||| || |||||||||||||||||||| |||||||||||| || |||    
T  7699881 tggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatcctttt 7699980  T
Q  220 tcatctct 227  Q
    | ||||||    
T  7699981 ttatctct 7699988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 7700079 - 7700186
Alignment:
Q  121 tggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccattt 219  Q
    |||||||||||||||| ||| | ||||||||||||| ||||| ||||||  ||||| || |||||||||||||||||||| |||||||||||| || |||    
T  7700079 tggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatcctttt 7700178  T
Q  220 tcatctct 227  Q
    | ||||||    
T  7700179 ttatctct 7700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 7700277 - 7700384
Alignment:
Q  121 tggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccattt 219  Q
    |||||||||||||||| ||| | ||||||||||||| ||||| ||||||  ||||| || |||||||||||||||||||| |||||||||||| || |||    
T  7700277 tggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatcctttt 7700376  T
Q  220 tcatctct 227  Q
    | ||||||    
T  7700377 ttatctct 7700384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 7700475 - 7700582
Alignment:
Q  121 tggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccattt 219  Q
    |||||||||||||||| ||| | ||||||||||||| ||||| ||||||  ||||| || |||||||||||||||||||| |||||||||||| || |||    
T  7700475 tggaaaaagataggtaaacaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatcctttt 7700574  T
Q  220 tcatctct 227  Q
    | ||||||    
T  7700575 ttatctct 7700582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 5811163 - 5811268
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||| | ||||| ||||||| |  ||||||||| ||||| ||  ||||||||||||||||| |||||| ||| |||||| |||||    
T  5811163 ggaaaaagataggtagacacccttttttatacacctcccatgtacacctcatgtgttaggggtattttagtaatttcacatcacatcctcaccccttttc 5811262  T
Q  222 atctct 227  Q
    ||||||    
T  5811263 atctct 5811268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 29953571 - 29953665
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacc-ccatgtattctgggtattttagtaattttacatcatatcatcaccc 215  Q
    ||||||||||||||||||| | ||||||||||||  |||||||| ||  |||||||||  || ||||| ||||||||||||||||||||||||||    
T  29953571 ggaaaaagataggtagacaccctttttcatacacttcttatgtagacttccatgtattagggatatttgagtaattttacatcatatcatcaccc 29953665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 46475216 - 46475110
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctggg-tattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||| ||||||| || ||||||| | ||||| || |||| |||||||||||||| |||||| ||| |||||| ||||    
T  46475216 ggaaaaagataggtagacacccttttttatacacctctcatgtacatctcatgtgttatggggtattttagtaatttcacatcacatcgtcacccctttt 46475117  T
Q  221 catctct 227  Q
    |||||||    
T  46475116 catctct 46475110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 13108338 - 13108245
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcaccc 215  Q
    ||||||||||||||||||| | ||||| |||||||  | ||||||||| ||||| ||  ||||||||||||||||| |||||| ||| ||||||    
T  13108338 ggaaaaagataggtagacacccttttttatacacctttcatgtacacctcatgtgttaggggtattttagtaatttcacatcacatcctcaccc 13108245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 36957619 - 36957515
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    |||||||||||||||||||  |||||| |||||||  | || ||||||| |||| ||  |||||||||||||||||||||| | || |||| ||||||||    
T  36957619 ggaaaaagataggtagacacaattttttatacacctttcatatacaccc-atgtgttgggggtattttagtaattttacattacattatcatccattttc 36957521  T
Q  222 atctct 227  Q
    ||||||    
T  36957520 atctct 36957515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 21807324 - 21807427
Alignment:
Q  124 aaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttcat 223  Q
    |||||||||||| |||| | ||||| ||||||  || || ||||||||| || ||  ||||||||||||||||| |||| | ||||||| ||||||||||    
T  21807324 aaaaagataggttgacaaccttttttatacacttctcatatacaccccacgtgttaggggtattttagtaatttcacataacatcatcatccattttcat 21807423  T
Q  224 ctct 227  Q
    ||||    
T  21807424 ctct 21807427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 42950036 - 42950111
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattt 197  Q
    ||||||||||||||||||| | ||||| |||||||    ||||||||||||||| |   |||||||||||||||||    
T  42950036 ggaaaaagataggtagacacccttttttatacacctagcatgtacaccccatgtttcaggggtattttagtaattt 42950111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 23980262 - 23980217
Alignment:
Q  182 ggtattttagtaattttacatcatatcatcacccattttcatctct 227  Q
    |||||||||||||||| |||||| ||| |||||| |||||||||||    
T  23980262 ggtattttagtaatttcacatcacatcctcaccccttttcatctct 23980217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 18184744 - 18184639
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||| ||||| ||  ||||||||||||||||||| ||||||||||||||| |||||    
T  18184744 ggaaaaagataggtagacatcctttttcatacaccttttatgtacacctcatgtgttaggggtattttagtaattttatatcatatcatcaccccttttc 18184645  T
Q  222 atctct 227  Q
    ||||||    
T  18184644 atctct 18184639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 30432530 - 30432425
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    |||||||||| | |||||| | ||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  30432530 ggaaaaagattgatagacaccctttttcatacacctcttatgtacatcccatatattatgggtattttagtaattttacatcatatcatcaccccttttc 30432431  T
Q  222 atctct 227  Q
    ||||||    
T  30432430 atctct 30432425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 31318997 - 31318891
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||| |||||||  | |||||| |||||||||||||||||||||||||| ||||    
T  31318997 ggaaaaagataggtagacatcatttttcatacacttcttatatacacccccatgtattaggagtatttgagtaattttacatcatatcatcacccttttt 31318898  T
Q  221 catctct 227  Q
    |||||||    
T  31318897 catctct 31318891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 43186218 - 43186115
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  ||| |||| |||||||||| ||||||||||||||  |||||    
T  43186218 ggaaaaagataggtagacatcatttttcatacacttcttatgtacaccctatgtattaggggcatttgagtaattttatatcatatcatcaccttttttc 43186119  T
Q  222 atct 225  Q
    ||||    
T  43186118 atct 43186115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 10203859 - 10203750
Alignment:
Q  119 tatggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccat 217  Q
    |||||||||||||||||||||| | ||||||||||| | ||||||||||||| ||||||||  || |||||||||||||||| ||||||||| ||||| |    
T  10203859 tatggaaaaagataggtagacaccctttttcatacatctcttatgtacaccctcatgtattagggatattttagtaattttatatcatatcaccaccctt 10203760  T
Q  218 tttcatctct 227  Q
    ||||||||||    
T  10203759 tttcatctct 10203750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 12665537 - 12665438
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| |||||| |||||| |||||||| |||| ||||| ||  ||||||||||||||||||||||||||||||||||| ||||    
T  12665537 ggaaaaagataggtagacatcctttttcgtacacctcttatgtataccctcatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 12665438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 42162790 - 42162684
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    |||||||||||||||||||   ||||||||||||   ||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||| ||||    
T  42162790 ggaaaaagataggtagacactctttttcatacactttttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 42162691  T
Q  221 catctct 227  Q
    |||||||    
T  42162690 catctct 42162684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 36189406 - 36189302
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||| | ||  |||||||||| |||||||| ||||||||||||| | |||||    
T  36189406 ggaaaaagataggtagacaccctttttcatacaccacttatgtaca-cccatatgttaggggtattttaataattttatatcatatcatcactccttttc 36189308  T
Q  222 atctct 227  Q
    ||||||    
T  36189307 atctct 36189302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 44081964 - 44081866
Alignment:
Q  130 ataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccattttcatctct 227  Q
    ||||||||||| | ||||||||||||  |||||||||||||| |||||||  |||||||| ||||||||||||| |||||||||||| |||||||||||    
T  44081964 ataggtagacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacattatatcatcaccctttttcatctct 44081866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 33726205 - 33726097
Alignment:
Q  120 atggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcaccca-tt 218  Q
    ||||||||||||||||||||| | ||||| ||||||| |  ||||||||  ||||| ||  ||||||||||||||||| |||||| ||| ||| ||| ||    
T  33726205 atggaaaaagataggtagacacccttttttatacacctcccatgtacacttcatgtgttaggggtattttagtaatttcacatcacatcgtcatccactt 33726106  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  33726105 ttcatctct 33726097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 44275897 - 44275792
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    |||||||||||| |||||| | ||||||||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||||     
T  44275897 ggaaaaagatagatagacaccctttttcatacacctcttatgtacaccccatgtgttaggggtattttagtaattttacatcatatcatcacccttttta 44275798  T
Q  222 atctct 227  Q
    ||||||    
T  44275797 atctct 44275792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 28093095 - 28093202
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||| |||||||  |||||||| |||| ||||||||||||||||||||| ||||    
T  28093095 ggaaaaagataggtagacatcctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtatttttacatcatatcatcacccttttt 28093194  T
Q  221 catctctc 228  Q
    ||||||||    
T  28093195 catctctc 28093202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 49244006 - 49243915
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcac 213  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  49244006 ggaaaaagatatgtagacatcctttttcatacacctcttatgtacactccatgtattaggggtattttagtaattttacatcatatcatcac 49243915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 21390952 - 21391060
Alignment:
Q  119 tatggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccatt 218  Q
    |||||||||||||||||||||| | |||||||||||||  ||||||||||| ||||| ||  |||||||||||||||||||||||||||  |||| ||||    
T  21390952 tatggaaaaagataggtagacaccctttttcatacaccttttatgtacacctcatgtgttaggggtattttagtaattttacatcatatattcactcatt 21391051  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  21391052 ttcatctct 21391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 7217957 - 7217851
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||| ||| | ||||||||||||| ||||||||||||| ||||| || | |||||||||||||||||||||||||||||||||| ||||    
T  7217957 ggaaaaagataggtaaacaccctttttcatacacctcttatgtacaccctcatgtgttataggtattttagtaattttacatcatatcatcacccttttt 7217858  T
Q  221 catctct 227  Q
     ||||||    
T  7217857 tatctct 7217851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 6112821 - 6112716
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    |||||||||||||||||||   ||||||||||||  ||||||||||| |||||||||  |||||||| ||||||||||||||||||||||| || |||||    
T  6112821 ggaaaaagataggtagacactctttttcatacacttcttatgtacactccatgtattaggggtatttgagtaattttacatcatatcatcatcctttttc 6112722  T
Q  222 atctct 227  Q
    ||||||    
T  6112721 atctct 6112716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 35545102 - 35545005
Alignment:
Q  124 aaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggta-ttttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||  ||||| |||||||||||||||||||||||||||||| ||||    
T  35545102 aaaaagataggtagacaccctttttcatacaccacttatgtacactccatgtgttaggggtatttttagtaattttacatcatatcatcacccctttt 35545005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 3672466 - 3672360
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||| | | ||||||||||||  ||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||||| ||||    
T  3672466 ggaaaaagataggtagataccctttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcacccttttt 3672367  T
Q  221 catctct 227  Q
    |||||||    
T  3672366 catctct 3672360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 46192551 - 46192445
Alignment:
Q  122 ggaaaaagataggtagacatcatttttc-atacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | |||||  ||||||| |||||||||||||||||||    |||||||||| | |||| |||||| || ||||||| ||||    
T  46192551 ggaaaaagataggtagacacccttttttgatacacctcttatgtacaccccatgtaccaggggtattttaatcatttcacatcacattatcacccctttt 46192452  T
Q  221 catctct 227  Q
     ||||||    
T  46192451 tatctct 46192445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 39371121 - 39371013
Alignment:
Q  120 atggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatt 218  Q
    ||||||||||||||||||||| | ||||||||||||  |||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||| ||    
T  39371121 atggaaaaagataggtagacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcacccttt 39371022  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  39371021 ttcatctct 39371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 2237470 - 2237362
Alignment:
Q  120 atggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatt 218  Q
    ||||||||||||||||||||| | ||||||||||||  |||||||||||||| | |||||  |||||||| |||||||||||||||||||||||||| ||    
T  2237470 atggaaaaagataggtagacaccctttttcatacacttcttatgtacacccccaagtattaggggtatttgagtaattttacatcatatcatcacccttt 2237371  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  2237370 ttcatctct 2237362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 31800749 - 31800646
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||| ||||| | ||||||||||||| ||| |||||||||||| | ||  ||||||||||||||||||||||||||||||||||| |||||    
T  31800749 ggaaaaagataggcagacaccctttttcatacacctcttgtgtacaccccatatgttaggggtattttagtaattttacatcatatcatcaccccttttc 31800650  T
Q  222 atct 225  Q
    ||||    
T  31800649 atct 31800646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 40887941 - 40888047
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtaca-ccccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||| |||||| ||||   |||||||||||||||||||||||||||| ||||| ||||    
T  40887941 ggaaaaagataggtagacaccctttttcatacacctcttatgtacacccccatctattagaggtattttagtaattttacatcatatcaccacccttttt 40888040  T
Q  221 catctct 227  Q
    |||||||    
T  40888041 catctct 40888047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 42683791 - 42683685
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtaca-ccccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||| |||||| ||||  ||||||||||||||||||||||||||||| || || ||||    
T  42683791 ggaaaaagatagatagacatcctttttcatacacctcttatgtacacccccatatattaggggtattttagtaattttacatcatatcaccatccttttt 42683692  T
Q  221 catctct 227  Q
    |||||||    
T  42683691 catctct 42683685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 13347320 - 13347216
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||||||||||  ||||||||||||| ||||||||  |||||||| ||||||| |||||||||||||||| | ||||    
T  13347320 ggaaaaagataggtagacaccctttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcactcttttt 13347221  T
Q  221 catct 225  Q
    |||||    
T  13347220 catct 13347216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 14831736 - 14831630
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||| ||| | ||||||||||||  |||||||||||||| | |||||  |||||||| | |||||||||||||||||||||||| ||||    
T  14831736 ggaaaaagataggtaaacaccctttttcatacacttcttatgtacacccctacgtattaggggtatttgaataattttacatcatatcatcacccttttt 14831637  T
Q  221 catctct 227  Q
    |||||||    
T  14831636 catctct 14831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 1815618 - 1815721
Alignment:
Q  121 tggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    |||||||||||||||||||| | ||||||||| |  |   |||||||||| |||| ||  ||||||||||||||||||||||||||||||||||| ||||    
T  1815618 tggaaaaagataggtagacaccttttttcataaagaa---atgtacaccctatgtgttaggggtattttagtaattttacatcatatcatcacccctttt 1815714  T
Q  221 catctct 227  Q
    |||||||    
T  1815715 catctct 1815721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 9408058 - 9408144
Alignment:
Q  142 catttttcatacaccacttatgtacacccc-atgtattctgggtattttagtaattttacatcatatcatcacccattttcatctct 227  Q
    ||||||||||||||  |||||||||||||| || ||||  |||||||| |||||||||||||||||||||||||| |||||||||||    
T  9408058 catttttcatacacttcttatgtacacccccatatattaggggtatttgagtaattttacatcatatcatcaccctttttcatctct 9408144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 27553376 - 27553478
Alignment:
Q  125 aaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttcatc 224  Q
    |||| |||| |||||| | ||||||||||||| ||||||||||||| |||| ||  | |||||||||||||||||||||| || ||||||  ||||| ||    
T  27553376 aaaaaatagatagacaccctttttcatacacctcttatgtacaccctatgtgttaggagtattttagtaattttacatcagataatcaccatttttcttc 27553475  T
Q  225 tct 227  Q
    |||    
T  27553476 tct 27553478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 19124532 - 19124563
Alignment:
Q  182 ggtattttagtaattttacatcatatcatcac 213  Q
    ||||||||||||||||||||||||||||||||    
T  19124532 ggtattttagtaattttacatcatatcatcac 19124563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 17225449 - 17225403
Alignment:
Q  181 gggtattttagtaattttacatcatatcatcacccattttcatctct 227  Q
    ||||||||||||||||| |||||| |||||||||  |||||||||||    
T  17225449 gggtattttagtaatttcacatcacatcatcacctcttttcatctct 17225403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 34307137 - 34307239
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacac-cccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||| ||||    
T  34307137 ggaaaaagataggtagacaccttttttcatacacctcttatgtacactcccatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 34307236  T
Q  221 cat 223  Q
    |||    
T  34307237 cat 34307239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 2509216 - 2509110
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    |||||||||||||||||||   ||||||||||||| ||||||||||||| ||||||||  || |||||||||||||||||||||||||| ||||| ||||    
T  2509216 ggaaaaagataggtagacactttttttcatacacctcttatgtacaccctcatgtattagggatattttagtaattttacatcatatcaccacccttttt 2509117  T
Q  221 catctct 227  Q
    |||||||    
T  2509116 catctct 2509110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 39249864 - 39249968
Alignment:
Q  124 aaaaagataggtagacatcatttttcatacaccacttatgtaca-ccccatgtattctgggtattttagtaattttacatcatatcatcacccattttca 222  Q
    ||||||||||||||||| | ||||||||||||| |||||||||| |||||||||||  |||||||||||||||||||||| |||||| || || ||||||    
T  39249864 aaaaagataggtagacaccttttttcatacacctcttatgtacacccccatgtattaggggtattttagtaattttacattatatcaccatcctttttca 39249963  T
Q  223 tctct 227  Q
    |||||    
T  39249964 tctct 39249968  T

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Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 46901734 - 46901840
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacacc-ccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| |||||||||||   |||||||||||| ||||||||   | |||||| |||||||||||||||||||||||||| ||||    
T  46901734 ggaaaaagataggtagacatcctttttcatacatttcttatgtacaccgccatgtatcaggagtatttgagtaattttacatcatatcatcacccttttt 46901833  T
Q  221 catctct 227  Q
    |||||||    
T  46901834 catctct 46901840  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 19258669 - 19258777
Alignment:
Q  119 tatggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccatt 218  Q
    |||| ||||||||||||||||| | ||||| ||||| | || ||||||||||||||| ||  |  ||||||| |||||| |||||| |||| ||||| ||    
T  19258669 tatgaaaaaagataggtagacacccttttttatacatctctcatgtacaccccatgtgttaggaatattttaataatttcacatcacatcaccacccctt 19258768  T
Q  219 ttcatctct 227  Q
    |||||||||    
T  19258769 ttcatctct 19258777  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 28647544 - 28647441
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||| | ||||| ||||| | || ||||||| ||||||| ||  |  ||||||| |||||| |||||| |||| ||||| |||||    
T  28647544 ggaaaaagataggtagacacccttttttatacatctctcatgtacatcccatgtgttaggaatattttaataatttcacatcacatcaccaccccttttc 28647445  T
Q  222 atct 225  Q
    ||||    
T  28647444 atct 28647441  T

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Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 13697759 - 13697654
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||   | |||||||||||||||| ||||||||||||||| |||||    
T  13697759 ggaaaaagataggtagagatcatttttcatacattacttatgtacaccccatgtgttagagatattttagtaattttatatcatatcatcacccgttttc 13697660  T
Q  222 atctct 227  Q
    ||||||    
T  13697659 atctct 13697654  T

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Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 3986905 - 3987010
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    |||||||||||||||||||||||||||||||||    ||||||| ||||||||||||  |||||||| |||||||||||||||||| |||| || |||||    
T  3986905 ggaaaaagataggtagacatcatttttcatacatttattatgtataccccatgtattaagggtatttgagtaattttacatcatattatcatcccttttc 3987004  T
Q  222 atctct 227  Q
    ||||||    
T  3987005 atctct 3987010  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 3118046 - 3118150
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacac-cccatgtattctgggtattttagtaattttacatcatatcatcacccatttt 220  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||||||  ||||||||||||||||||||||||| ||| ||||| ||||    
T  3118046 ggaaaaagataggtagacatcctttttcatacatctcttatgtacactcccatgtattaggggtattttagtaattttacatcatgtcaccacccttttt 3118145  T
Q  221 catct 225  Q
     ||||    
T  3118146 tatct 3118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 24208635 - 24208530
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||||||||||||||||| ||||| ||||||| || || |||||| ||||| ||  ||||||||||||||||| |||||| ||| |||||| |||||    
T  24208635 ggaaaaagataggtagacatccttttttatacacctctcatttacacctcatgtgttaggggtattttagtaatttcacatcacatcctcaccctttttc 24208536  T
Q  222 atctct 227  Q
    ||||||    
T  24208535 atctct 24208530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 15345659 - 15345762
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttc 221  Q
    ||||||| ||||||||||||| ||||||||||||  ||||||||||||| |||||||  ||| |||| |||||||| | ||||||||||||||  |||||    
T  15345659 ggaaaaaaataggtagacatcttttttcatacacttcttatgtacaccctatgtattaggggcatttgagtaatttgatatcatatcatcaccttttttc 15345758  T
Q  222 atct 225  Q
    ||||    
T  15345759 atct 15345762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 14023124 - 14023020
Alignment:
Q  123 gaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaattttacatcatatcatcacccattttca 222  Q
    |||||||||||||||||| | ||||| ||||||| |  ||||||||| ||||| ||  ||||||||||||||||| |||||| ||| |||||| || |||    
T  14023124 gaaaaagataggtagacacccttttttatacacctcccatgtacacctcatgtgttaggggtattttagtaatttcacatcacatcgtcaccccttgtca 14023025  T
Q  223 tctct 227  Q
    |||||    
T  14023024 tctct 14023020  T

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Target: scaffold0062 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 227
Target Start/End: Complemental strand, 6913 - 6804
Alignment:
Q  119 tatggaaaaagataggtagacatcatttttcatacaccacttatgtacaccc-catgtattctgggtattttagtaattttacatcatatcatcacccat 217  Q
    |||||||||||||||||||| | | ||||||||||||  ||||||||||||| ||||||||  || ||||| |||||||||||||||||||||||||| |    
T  6913 tatggaaaaagataggtagataccttttttcatacacttcttatgtacaccctcatgtattagggatatttaagtaattttacatcatatcatcaccctt 6814  T
Q  218 tttcatctct 227  Q
    ||||||||||    
T  6813 tttcatctct 6804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 87162 - 87239
Alignment:
Q  122 ggaaaaagataggtagacatcatttttcatacaccacttatgtacaccccatgtattctgggtattttagtaatttta 199  Q
    ||||||||||||||||||| | |||||||||||||  ||||||||||||||||| ||  |||||||||||||||||||    
T  87162 ggaaaaagataggtagacaccttttttcatacaccttttatgtacaccccatgtgttaggggtattttagtaatttta 87239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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