View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8909_low_56 (Length: 215)
Name: NF8909_low_56
Description: NF8909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8909_low_56 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 10566857 - 10567053
Alignment:
| Q |
14 |
tggacatcactacaaatttactttggtccttttgccaagaggatgttactgagggtccagaacaactatataactcagagatagcactatattgactttc |
113 |
Q |
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| T |
10566857 |
tggacatcactacaaatttactttggtccttttgccaagaggatgttactgagggtccagaacaactatataactcagagatagcactatattgactttc |
10566956 |
T |
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| Q |
114 |
aaactcaccacggtctggaatagatctaatcgtcttcatgaactctaaataatcagtccccatacatggaacctccgagttgatgtccatctcattg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |
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| T |
10566957 |
aaactcaccacggtctggaatagatctaatcgtcttcatgaactctaaataatcagtccccatacatggaacctccgagttgttttccttctcattg |
10567053 |
T |
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