View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8910_high_32 (Length: 272)
Name: NF8910_high_32
Description: NF8910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8910_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 25025815 - 25025549
Alignment:
| Q |
1 |
acatttaaaatgtagaatgtaggtatgtc---cttcactgatga-------gtttaagaagtccgtgaataaagaagtatgtaggacagtaccttaatta |
90 |
Q |
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||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
25025815 |
acatttaaaatgtagaatgtaggtatgtcgtccttcactgatgactgatgagtttaagaagtccgtgaataaagaagtgtgtaggacagtaccttaatta |
25025716 |
T |
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| Q |
91 |
agagatttgtcaccctctcacacatgttgtgattgtgaagtgaagtaaaactacgtcttgcttggtttcctaaccaaaactcttcgcacaattttcttgt |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
25025715 |
agagatttgtcaccctctcacacatgttgtgattgtgaagtgaagtaaaactacgtcttgcttggtttcctaaccaaaactcttggcacaattttcttgt |
25025616 |
T |
|
| Q |
191 |
tgttgtgaagtaaaactggagttttgcattatatagagctgattaatagtactttttgagaaaagtt |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25025615 |
tgttgtgaagtaaaactggagttttgcattatatagagctgattaatagtactttttgagaaaagtt |
25025549 |
T |
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