View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8910_high_37 (Length: 223)
Name: NF8910_high_37
Description: NF8910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8910_high_37 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 43467118 - 43467340
Alignment:
| Q |
1 |
ttggaaccgctgtttccatttgtgttgttcaactgatattttactcgccaaatacgtggaaaggctgcggtcaagagattaattgtaagaaaatctattt |
100 |
Q |
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| T |
43467118 |
ttggaaccgctgtttccatttgtgttgttcaactgatattttactcgccaaatacgtggaaagtctgcggtcaagagattaattgtaagaaaatctattt |
43467217 |
T |
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| Q |
101 |
ttctggtatgacatgttttgtgaactaaaggttaaatagtgcaaagcaagcagcatgatggattgtatgttagtgtaacaatgatatctgtactctgtag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43467218 |
ttctggtatgacatgttttgtgaactaaaggttaaatagtgcaaagcaagcagcatgatggattgtatgttagtgtaacaatgatatctgtactctgtag |
43467317 |
T |
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| Q |
201 |
ttgatgtgtaatacagcattttt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
43467318 |
ttgatgtgtaatacagcattttt |
43467340 |
T |
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