View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8910_low_3 (Length: 748)
Name: NF8910_low_3
Description: NF8910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8910_low_3 |
 | |
|
| [»] scaffold0103 (2 HSPs) |
| | |
|
| [»] scaffold0046 (2 HSPs) |
| | |
|
| [»] scaffold0664 (1 HSPs) |
| | |
|
| [»] scaffold0359 (1 HSPs) |
| | |
|
| [»] scaffold0561 (1 HSPs) |
| | |
|
| [»] scaffold0300 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0103 (Bit Score: 405; Significance: 0; HSPs: 2)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 39 - 525
Target Start/End: Complemental strand, 30044 - 29559
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
30044 |
tagtataaaaatacatcaattataactattgatgtgactataagagaga--aacaactaattaaaaaattatatattatctatatggtatagatatacga |
29947 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtcaatatatcatttctcttttgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaaccttgcat |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29946 |
tgttggacaaccaaaaggttgtcaatatatcatttctcttttgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaaccttgcat |
29847 |
T |
|
| Q |
239 |
tcatctgttgaattattattaaatattgcatgtcaggtttgagggtgttacataaacatagttatagtaaagaaaaagtatttgtttgcacacttccaca |
338 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29846 |
tcatttgttgaattattattaaatatttcatgtggggtttgagggtgttacataatcatagttatagtaaagaaaaagtatttgtttgcacgcttccaca |
29747 |
T |
|
| Q |
339 |
gctgtaattgctataaattctcatacaaacaaatacctaacgagccccttaacttctcaaattgcacaacatttgaaaccttagtgaaaatatatgttag |
438 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29746 |
actgtaattgctataaattctcatacaaataaatacctaacgagccccttaacttctcaaattgcacaacatttgaaaccttagtgaaaatatatgttag |
29647 |
T |
|
| Q |
439 |
ttgttgtttagttgctacacactcaaggttcataactttacctttaacatgttccgtgatg-catgatgacaaatgtcaatagggttg |
525 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29646 |
ttgttgttcagttgttacccactcaaggttcataactttaccttcaacatgttccgtgatgaaatgatgacaaatgtcaatagggttg |
29559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 573 - 732
Target Start/End: Complemental strand, 29562 - 29403
Alignment:
| Q |
573 |
gttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtttcatcctgagaaactgggtgcaactacttccttcagctatg |
672 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||||| ||||||||||||||||| |
|
|
| T |
29562 |
gttgtcacagtataatgtcatgacatcttgttcgacattgtactcattcaacatatgtttcatctagaaaaattgggtgcaattacttccttcagctatg |
29463 |
T |
|
| Q |
673 |
tattcagcctgtgcattggatatatagacaaagttttatttcttgctgaaccaagatatc |
732 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
29462 |
tattcagcttgtgcattggatatagagacaaagttttatttctttctgaaccaagatatc |
29403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 10110961 - 10110824
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
10110961 |
tagtataaaaatacatcaattataactattgatgtgactataagagagagaaacaactaattaaaaaatgacatagtatctatacggtatagatatacga |
10110862 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtcaatatatcatttctc |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10110861 |
tgttggacaaccaaaaggttgtcaatatatcatttctc |
10110824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 14628835 - 14628921
Alignment:
| Q |
83 |
agagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatgttggacaaccaaaaggttgtcaatatatcatttctc |
176 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
14628835 |
agagagaaacaactaattaaaaaatgatatagtatctatacagtata-------gatgtaggacaaccaaaagattgtcaatatatcatttctc |
14628921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 290
Target Start/End: Original strand, 12027049 - 12027160
Alignment:
| Q |
177 |
ttttgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatattgcatgtcaggt |
276 |
Q |
| |
|
|||| ||||||||||||||||||||| | |||||||||| ||||||| || |||||||||||| |||| ||| ||||||||||||| | ||||| || |
|
|
| T |
12027049 |
tttttaaaatgaattatgcatgttttgc-attattgaagacgtagcacctagaaccttgcatttatct-ctgatttattattaaataattcatgtggagt |
12027146 |
T |
|
| Q |
277 |
ttgagggtgttaca |
290 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
12027147 |
ttgagggtattaca |
12027160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 637
Target Start/End: Original strand, 26039308 - 26039398
Alignment:
| Q |
547 |
ttctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtttcatcc |
637 |
Q |
| |
|
||||| |||||||| || ||||||| |||||||||||| || || | ||||||||||| ||||| |||||||||||||| || ||||||| |
|
|
| T |
26039308 |
ttcttggaaatgttgatagcacttaggttgtcacagtataaagttagaacatcttgttccacattatactccttcaacatctgcttcatcc |
26039398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 34516205 - 34516113
Alignment:
| Q |
81 |
agagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatgttggacaaccaaaaggttgtcaatatatcatttct |
175 |
Q |
| |
|
||||||||||||||||||||||||||||| | | || ||||| |||| ||||||| ||||||| ||||||| ||||||| ||| ||||||| |
|
|
| T |
34516205 |
agagagagaaacaactaattaaaaaatgaaacagtacttatacagtat--atatacggtgttggagaaccaaataattgtcaacataacatttct |
34516113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 622
Target Start/End: Complemental strand, 22249445 - 22249355
Alignment:
| Q |
532 |
ctatgttgaatgagattctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttca |
622 |
Q |
| |
|
|||||||| || ||||||| |||||||| || ||||||| |||||||||||| || || | ||||||| ||| ||||| |||||||||| |
|
|
| T |
22249445 |
ctatgttggataggattcttggaaatgttgatagcacttaggttgtcacagtataaggttagaacatcttattcaacattatactccttca |
22249355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 123; Significance: 8e-63; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 2199215 - 2199353
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
2199215 |
tagtataaaaatacatcaattataactattgatgtgactataagagagagaaacaactaattaaaaaatgacgtagtatctatacggtatagatatacga |
2199314 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtcaatatatcatttctct |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2199315 |
tgttggacaaccaaaaggttgtcaatatatcatttctct |
2199353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 174
Target Start/End: Original strand, 50657680 - 50657811
Alignment:
| Q |
42 |
tataaaaatacatcaatt-ataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatg |
140 |
Q |
| |
|
|||||||||||| ||||| |||| ||| |||||||||| |||||||||||| || |||||||||||||| ||| ||| ||||| |||| ||||| | || |
|
|
| T |
50657680 |
tataaaaataca-caattcataactatcgatgtgactagaagagagagaaataagtaattaaaaaatgaaatagtatttatac-atataaatatatggtg |
50657777 |
T |
|
| Q |
141 |
ttggacaaccaaaaggttgtcaatatatcatttc |
174 |
Q |
| |
|
||||||||| ||| |||||||| ||| |||||| |
|
|
| T |
50657778 |
ttggacaacacaaaagttgtcaagataacatttc |
50657811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 37504371 - 37504423
Alignment:
| Q |
44 |
taaaaatacatcaattataaatattgatgtgactataagagagagaaacaact |
96 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
37504371 |
taaaaatacatcatttataattattgatgtgactataaaagagataaacaact |
37504423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 637
Target Start/End: Complemental strand, 20198611 - 20198506
Alignment:
| Q |
532 |
ctatgttgaatgagattctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtt |
631 |
Q |
| |
|
||||||||||| |||| || ||||||| || ||||||| |||| ||||||| || || | |||| |||||| ||||| ||||||||||||||||| | |
|
|
| T |
20198611 |
ctatgttgaataggatttttggaaatgtcgatagcacttaggttggcacagtataaagttagaacattttgttcaacattatactccttcaacatatgct |
20198512 |
T |
|
| Q |
632 |
tcatcc |
637 |
Q |
| |
|
|||||| |
|
|
| T |
20198511 |
tcatcc |
20198506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 45227935 - 45227994
Alignment:
| Q |
47 |
aaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaa |
106 |
Q |
| |
|
|||||||||| |||| | |||| |||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
45227935 |
aaatacatcatttattactattaatgtgactataagagagataaacagttaattaaaaaa |
45227994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 118; Significance: 8e-60; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 39 - 176
Target Start/End: Complemental strand, 28762275 - 28762138
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
28762275 |
tagtataaaaatacatcaattataactattgatgtgattataagagagagaaacaactaattaaaaaataatatagtatctatacggtatagatatacga |
28762176 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtcaatatatcatttctc |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28762175 |
tgttggacaaccaaaaggttgtcaatatataatttctc |
28762138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 21188893 - 21189003
Alignment:
| Q |
180 |
tgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatattgcatgtcaggtttg |
279 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||| | |||| |
|
|
| T |
21188893 |
tgaaaattaattatgcatgatttta-attattgaaggcgtagcatcttgaaccttgtatttatctgttcatttattattaaatattgcatgtgaaatttg |
21188991 |
T |
|
| Q |
280 |
agggtgttacat |
291 |
Q |
| |
|
|||||||||||| |
|
|
| T |
21188992 |
agggtgttacat |
21189003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 15495316 - 15495397
Alignment:
| Q |
210 |
ttgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatattgcatgtcaggtttgagggtgttacat |
291 |
Q |
| |
|
||||||| ||| |||||||||||||| ||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
15495316 |
ttgaaggtgtatcatcttgaaccttgtatttatctgttgatttattattaaatatcacatgtgaggtttgagggtgttacat |
15495397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 637
Target Start/End: Complemental strand, 15570377 - 15570272
Alignment:
| Q |
532 |
ctatgttgaatgagattctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtt |
631 |
Q |
| |
|
||||||| ||| |||||||| |||||||| || ||||||| ||||||||| || || || | ||||||||||| ||||| ||||| |||||||| || | |
|
|
| T |
15570377 |
ctatgttaaataagattcttggaaatgttgatagcacttaggttgtcacattataaggttagaacatcttgttcaacattatactcattcaacatctgct |
15570278 |
T |
|
| Q |
632 |
tcatcc |
637 |
Q |
| |
|
|||||| |
|
|
| T |
15570277 |
tcatcc |
15570272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 176
Target Start/End: Original strand, 50229830 - 50229963
Alignment:
| Q |
40 |
agtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgat |
139 |
Q |
| |
|
|||||||||||||| | |||||| || |||| |||| |||||||||| || || |||||||||| ||| ||| || ||||||||||| ||||| | | |
|
|
| T |
50229830 |
agtataaaaatacacaatttataactaatgatatgaccataagagaga--aataagtaattaaaaa-tgaaatagtacttatacggtatacatatatggt |
50229926 |
T |
|
| Q |
140 |
gttggacaaccaaaaggttgtcaatatatcatttctc |
176 |
Q |
| |
|
||| |||||||||||||||| || ||| |||||||| |
|
|
| T |
50229927 |
attgaacaaccaaaaggttgttaagataacatttctc |
50229963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 2287034 - 2287134
Alignment:
| Q |
191 |
tatgcatgtttttcga-ttattgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatattgcatgtcaggtttgagggtgttac |
289 |
Q |
| |
|
|||||||| |||| || |||||||||||||| || ||||||||||| ||| |||| |||| ||| | |||||||| |||||| | ||||||||||||| |
|
|
| T |
2287034 |
tatgcatgatttttgagttattgaaggcgtaacaccttgaaccttgtatttatctattgatttaatgttaaatatcgcatgtggagcttgagggtgttac |
2287133 |
T |
|
| Q |
290 |
a |
290 |
Q |
| |
|
| |
|
|
| T |
2287134 |
a |
2287134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 110; Significance: 5e-55; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 33712506 - 33712368
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
33712506 |
tagtataaaaatacatcaattataactattgatgtgaccataagcgaga--aacaactaattaaaaaatgatatagtatctatacagtatagatatacga |
33712409 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtcaatatatcatttctcttt |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33712408 |
tgttggacaaccaaaaggttgtcaatatatcatttctcttt |
33712368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 41 - 175
Target Start/End: Complemental strand, 8335725 - 8335593
Alignment:
| Q |
41 |
gtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatg |
140 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
8335725 |
gtataaaaatacatcaattataactattgatgtgaccataagagaga--aacaactaattaaaaaatgatatagtatctatacagtatagatatacgatg |
8335628 |
T |
|
| Q |
141 |
ttggacaaccaaaaggttgtcaatatatcatttct |
175 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8335627 |
ttggacaactaaaaggttgtcaatatatcatttct |
8335593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 180 - 290
Target Start/End: Original strand, 27610002 - 27610112
Alignment:
| Q |
180 |
tgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatattgcatgtcaggtttg |
279 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||||||| || ||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
27610002 |
tgaaaattaattatgcatgattttggattattgaaggcgtaacaccttgaaccttgtatttatctgttgatttattattaaatattgcatgtggggtttg |
27610101 |
T |
|
| Q |
280 |
agggtgttaca |
290 |
Q |
| |
|
||||||||||| |
|
|
| T |
27610102 |
agggtgttaca |
27610112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 2094739 - 2094805
Alignment:
| Q |
58 |
ttataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacg |
124 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||||||||| | ||| || ||||||| |
|
|
| T |
2094739 |
ttataattattgatgtgattataagatagaggaacaactaattaaaaaattaaatagtacctatacg |
2094805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 637
Target Start/End: Original strand, 18590457 - 18590562
Alignment:
| Q |
532 |
ctatgttgaatgagattctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtt |
631 |
Q |
| |
|
|||||||||||||||||||| || || ||||| ||| | | || ||||| || |||||||||||| |||||||||||| || ||||| | ||| |||| |
|
|
| T |
18590457 |
ctatgttgaatgagattcttggatatattaattgcattcagattatcacaatattatgtcatgacattttgttcgacattatattcctttagcatttgtt |
18590556 |
T |
|
| Q |
632 |
tcatcc |
637 |
Q |
| |
|
|||||| |
|
|
| T |
18590557 |
tcatcc |
18590562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 21509510 - 21509562
Alignment:
| Q |
177 |
ttttgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaa |
230 |
Q |
| |
|
|||| ||||||||||||||||| |||| |||||||||||||||| || |||||| |
|
|
| T |
21509510 |
ttttaaaaatgaattatgcatg-ttttggattattgaaggcgtatcaccttgaa |
21509562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 106; Significance: 1e-52; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 301 - 601
Target Start/End: Original strand, 13486126 - 13486427
Alignment:
| Q |
301 |
tatagtaaagaaaaagtatttgtttgcacacttccacagctgtaattgctataaattctcatacaaacaaatacctaacgagccccttaacttctcaaat |
400 |
Q |
| |
|
||||||||| | ||||||| |||||| ||||||| |||||||| ||||||| |||||||||| |||| |||||| ||||||||||| |||||||| |
|
|
| T |
13486126 |
tatagtaaatagaaagtatccatttgcatgcttccacgactgtaatttctataaactctcatacaagcaaaaacctaaagagccccttaatttctcaaac |
13486225 |
T |
|
| Q |
401 |
tgcacaacatttgaaaccttagtgaaaatatatgttagttgttgtttagttgctacacactcaaggttcataactttacctttaacatgttccgtgatg- |
499 |
Q |
| |
|
|| |||||||||| |||||||| ||||||| || ||||||||| | |||||||| ||||| |||||||||||| | || |||||||||||||||| |
|
|
| T |
13486226 |
tgaacaacatttggcaccttagttaaaatatctgcctgttgttgttcatttgctacatactcatggttcataacttaatattcaacatgttccgtgatga |
13486325 |
T |
|
| Q |
500 |
catgatgacaaatgtcaatagggttggttatactatgttgaatgagattctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatc |
599 |
Q |
| |
|
||||||| ||||||||| | |||||| |||||||||||||||||||||| ||||| ||||| ||||| ||||| | ||||| |||||||||||||| |
|
|
| T |
13486326 |
aatgatgatgaatgtcaatgtgcttggttctactatgttgaatgagattcttagaaatattaatagcactcaagtttttgcagtataatgtcatgacatc |
13486425 |
T |
|
| Q |
600 |
tt |
601 |
Q |
| |
|
|| |
|
|
| T |
13486426 |
tt |
13486427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 30622440 - 30622308
Alignment:
| Q |
42 |
tataaaaatacatcaattataaatattgatgtgactataagagagagaaac-aactaattaaaaaatgatatattatctatacggtatagatatacgatg |
140 |
Q |
| |
|
|||||||||||| | |||||| || |||||||| ||||||| ||||||| || |||||||||||||| ||| ||| ||| | ||||| ||||| || |
|
|
| T |
30622440 |
tataaaaatacacaatttataactaatgatgtgattataagaaagagaaaataagtaattaaaaaatgaaatagtatttatccagtataaatata---tg |
30622344 |
T |
|
| Q |
141 |
ttggacaaccaaaaggttgtcaatatatcatttctc |
176 |
Q |
| |
|
|| |||| ||||||||||||||| ||| |||||||| |
|
|
| T |
30622343 |
tttgacagccaaaaggttgtcaagataacatttctc |
30622308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 9374787 - 9374739
Alignment:
| Q |
241 |
atctgttgaattattattaaatattgcatgtcaggtttgagggtgttac |
289 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
9374787 |
atctgttgatttattattaaatattgcatgtggggtttgagagtgttac |
9374739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 1e-49; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 13214640 - 13214779
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
13214640 |
tagtataaaaatacatcaattataactattaatgtgactataagagagagaaacaactaatt-aaaaatgatatagtatctatgcggtatagatatacga |
13214738 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtc-aatatatcatttctctt |
178 |
Q |
| |
|
| |||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
13214739 |
tattggacaaccaaaatgttgtcaaatatatcatttctctt |
13214779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 23822079 - 23821949
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||||| |
|
|
| T |
23822079 |
tagtataaaaatacatcaattataactattgatgtgactataagagagagaaacaactaattaaaaagtgacatagtatctatacgatatagatatac-- |
23821982 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtcaatatatcatttct |
175 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| |
|
|
| T |
23821981 |
----gtacaaccaaaaggttgtcaatatatcatttct |
23821949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 32602157 - 32602045
Alignment:
| Q |
42 |
tataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatgt |
141 |
Q |
| |
|
||||||||||||||| |||||| | ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||| ||||||| ||| |
|
|
| T |
32602157 |
tataaaaatacatcatttataacgaatgatgtgactatatgagagagaagtaactaattaaaaaatgatatattacttatacaatataaatatacgttgt |
32602058 |
T |
|
| Q |
142 |
tggacaaccaaaa |
154 |
Q |
| |
|
||||||||||||| |
|
|
| T |
32602057 |
tggacaaccaaaa |
32602045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 354732 - 354618
Alignment:
| Q |
180 |
tgaaaatgaattatgcatgtttttcg-attattgaaggcgtagcatcttgaaccttgcattcatctgttgaattatt---attaaatattgcatgtcagg |
275 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| | || || ||||||||||| ||| ||||||||||||||| ||||| |||||||| | || |
|
|
| T |
354732 |
tgaaaatgaattatgcatgtttttgggattattgaagacatatcaccttgaaccttgtatttatctgttgaattattattattaagtattgcatatgggg |
354633 |
T |
|
| Q |
276 |
tttgagggtgttaca |
290 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
354632 |
tttgagggtgttaca |
354618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 39 - 176
Target Start/End: Original strand, 20233349 - 20233484
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacga |
138 |
Q |
| |
|
||||||||||||| ||| |||||| | ||||||||||||||| ||||| | || |||||| ||||||| ||| |||||||| ||||||||||||| |
|
|
| T |
20233349 |
tagtataaaaatatatcttttataactgttgatgtgactataaaagaga--attaattaattacaaaatgaaatagtatctatatagtatagatatacgt |
20233446 |
T |
|
| Q |
139 |
tgttggacaaccaaaaggttgtcaatatatcatttctc |
176 |
Q |
| |
|
|||||||||||| || ||||||||||| |||||||| |
|
|
| T |
20233447 |
tgttggacaaccgaattgttgtcaatatgacatttctc |
20233484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 11244858 - 11244811
Alignment:
| Q |
244 |
tgttgaattattattaaatattgcatgtcaggtttgagggtgttacat |
291 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11244858 |
tgttgatttattattaaatattgcatgtggggtttgagggtgttacat |
11244811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 50415432 - 50415329
Alignment:
| Q |
58 |
ttataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatgttggacaaccaaaaggt |
157 |
Q |
| |
|
|||||| |||| ||||||||| |||||||||| ||||||||||||||||| | | || ||||| ||||| ||||| | | ||||||||| ||||| | |
|
|
| T |
50415432 |
ttataattattaatgtgactac--gagagagaaataactaattaaaaaatgaaacagcatttatacagtataaatatatggtattggacaactaaaagtt |
50415335 |
T |
|
| Q |
158 |
tgtcaa |
163 |
Q |
| |
|
|||||| |
|
|
| T |
50415334 |
tgtcaa |
50415329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 19572681 - 19572710
Alignment:
| Q |
15 |
catcaatatactcagattctaggatagtat |
44 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
19572681 |
catcaatatactcagattctaggatagtat |
19572710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 11226876 - 11226765
Alignment:
| Q |
180 |
tgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatattgcatgt-caggttt |
278 |
Q |
| |
|
||||||||||||||||||| |||| || ||||||||||||| || ||||||||||| ||| |||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
11226876 |
tgaaaatgaattatgcatgattttggaatattgaaggcgtaacaccttgaaccttgtatttatctgttgaattattattaaatatcgcatgtgggggttt |
11226777 |
T |
|
| Q |
279 |
gagggtgttaca |
290 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11226776 |
gagggtgttaca |
11226765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 36937120 - 36937185
Alignment:
| Q |
108 |
gatatattatctatacggtatagatatacgatgttggacaaccaaaaggttgtcaatatatcattt |
173 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
36937120 |
gatatagtatctatacaatatagatatacgatgttggataaccaaaagattgtcaatatatcattt |
36937185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 12525401 - 12525345
Alignment:
| Q |
177 |
ttttgaaaatgaattatgcatgtttttcgattattgaaggcgtagcatcttgaacct |
233 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||| |||| |||| |
|
|
| T |
12525401 |
ttttgaaaatgaattatgcatgattttgtattattgaaggcgtagcaccttgtacct |
12525345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 25614161 - 25614225
Alignment:
| Q |
42 |
tataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaa |
106 |
Q |
| |
|
|||||||||||| | |||||| || |||||||||||||| ||||||||| || ||||||||||| |
|
|
| T |
25614161 |
tataaaaatacacaatttataactaatgatgtgactataatagagagaaataagtaattaaaaaa |
25614225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 693098 - 692980
Alignment:
| Q |
58 |
ttataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatgttggacaaccaaaaggt |
157 |
Q |
| |
|
|||||| || ||| |||||||||| ||||| ||| || | |||||||||| | ||| ||| ||||||||||| ||||| | ||||||| || ||||| | |
|
|
| T |
693098 |
ttataactaatgacgtgactataaaagagacaaagaagttattaaaaaataaaatagtatttatacggtataaatatatggtgttggataatcaaaaaat |
692999 |
T |
|
| Q |
158 |
tgtcaatatatcatttctc |
176 |
Q |
| |
|
||| || ||| |||||||| |
|
|
| T |
692998 |
tgttaaaataacatttctc |
692980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 36937077 - 36937118
Alignment:
| Q |
39 |
tagtataaaaatacatcaattataaatattgatgtgactata |
80 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
36937077 |
tagtttaaaaatacatcaattataactattgatatgactata |
36937118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 48; Significance: 5e-18; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 30029128 - 30029025
Alignment:
| Q |
42 |
tataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaattaaaaaatgatatattatctatacggtatagatatacgatgt |
141 |
Q |
| |
|
||||||||||||| | |||||| |||||| ||||||||| | |||||||| ||||||||||||||| | ||| ||| ||||| ||||| ||||||| ||| |
|
|
| T |
30029128 |
tataaaaatacattatttataactattgacgtgactatatgcgagagaaataactaattaaaaaataaaatagtatttatacagtataaatatacgttgt |
30029029 |
T |
|
| Q |
142 |
tgga |
145 |
Q |
| |
|
|||| |
|
|
| T |
30029028 |
tgga |
30029025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 3942879 - 3942754
Alignment:
| Q |
41 |
gtataaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaat---taaaaaatgatatattatctatacggtatagatatacg |
137 |
Q |
| |
|
||||||||||| || | | ||| ||||||||||| ||||||||||||||| ||||||| ||||||||| ||| || |||| ||||| ||||| | |
|
|
| T |
3942879 |
gtataaaaatatataattaatagctattgatgtgaatataagagagagaaataactaataaaaaaaaaatgaaatagtacttatagagtataaatatatg |
3942780 |
T |
|
| Q |
138 |
atgttggacaaccaaaaggttgtcaa |
163 |
Q |
| |
|
|||||||||||||||| |||||||| |
|
|
| T |
3942779 |
gtgttggacaaccaaaaagttgtcaa |
3942754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 29318396 - 29318330
Alignment:
| Q |
225 |
cttgaaccttgcattcatctgttgaattattattaaatattgcatgtcaggtttgagggtgttacat |
291 |
Q |
| |
|
||||||||||| ||| ||||||||| |||||||||||||| |||| | |||||||| ||||||||| |
|
|
| T |
29318396 |
cttgaaccttgtatttatctgttgatttattattaaatatcgcatatggggtttgagtgtgttacat |
29318330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 40555079 - 40554969
Alignment:
| Q |
45 |
aaaaatacatcaattataaatattgatgtgactataagagagagaaacaactaatt-aaaaaatgatatattatctatacggtatagatatacgatgttg |
143 |
Q |
| |
|
|||| ||||| | |||||| || |||||| ||||||| | ||||||| || ||||| ||||||| | ||| ||| ||||||||||| ||||| | ||||| |
|
|
| T |
40555079 |
aaaattacataatttataactaatgatgtaactataaaaaagagaaataaataatttaaaaaataaaatagtatttatacggtataaatatatgttgttg |
40554980 |
T |
|
| Q |
144 |
gacaaccaaaa |
154 |
Q |
| |
|
|||||||||| |
|
|
| T |
40554979 |
aacaaccaaaa |
40554969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 637
Target Start/End: Original strand, 18085 - 18176
Alignment:
| Q |
546 |
attctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtttcatcc |
637 |
Q |
| |
|
|||||| |||||||| || ||||||| |||||||||||| || || | ||||||||||| ||||| |||||||||||||| || ||||||| |
|
|
| T |
18085 |
attcttggaaatgttgatagcacttaggttgtcacagtataaggttagaacatcttgttcaacattatactccttcaacatctgcttcatcc |
18176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 637
Target Start/End: Original strand, 27226 - 27317
Alignment:
| Q |
546 |
attctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtttcatcc |
637 |
Q |
| |
|
|||||| |||||||| || ||||||| ||||||| |||| || || | |||| |||||| ||||| |||||||||||||| || ||||||| |
|
|
| T |
27226 |
attcttggaaatgttgatagcacttaggttgtcatagtataaggttagaacattttgttcaacattatactccttcaacatctgcttcatcc |
27317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0664 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0664
Description:
Target: scaffold0664; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 5026 - 5091
Alignment:
| Q |
200 |
ttttcgattattgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatatt |
265 |
Q |
| |
|
|||| |||||||||||||||||||| || ||||||| ||| || |||||| ||||||||||||||| |
|
|
| T |
5026 |
ttttggattattgaaggcgtagcattttaaaccttgtatttatttgttgatttattattaaatatt |
5091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0359 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0359
Description:
Target: scaffold0359; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 637
Target Start/End: Original strand, 3856 - 3961
Alignment:
| Q |
532 |
ctatgttgaatgagattctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtt |
631 |
Q |
| |
|
||||||||||| ||||||| |||||||| || |||||| |||||||||||| || || | ||||||||||| ||||| |||||||||| ||| || | |
|
|
| T |
3856 |
ctatgttgaataggattcttggaaatgttgataacacttaggttgtcacagtataaggttagaacatcttgttcaacattatactccttcagcatctgct |
3955 |
T |
|
| Q |
632 |
tcatcc |
637 |
Q |
| |
|
|||||| |
|
|
| T |
3956 |
tcatcc |
3961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0561 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0561
Description:
Target: scaffold0561; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 637
Target Start/End: Original strand, 8250 - 8355
Alignment:
| Q |
532 |
ctatgttgaatgagattctttgaaatgttaatcgcacttaagttgtcacagtaaaatgtcatgacatcttgttcgacattgtactccttcaacatatgtt |
631 |
Q |
| |
|
||||||||||| ||||||| |||||||| || ||||||| ||| ||||| || || || | |||||||| || ||||| |||||||||||||| || | |
|
|
| T |
8250 |
ctatgttgaataggattcttggaaatgttgatagcacttaggttttcacaatataaggttagaacatcttggtcaacattatactccttcaacatctgct |
8349 |
T |
|
| Q |
632 |
tcatcc |
637 |
Q |
| |
|
|||||| |
|
|
| T |
8350 |
tcatcc |
8355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0300 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0300
Description:
Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 14985 - 15070
Alignment:
| Q |
207 |
ttattgaaggcgtagcatcttgaaccttgcattcatctgttgaattattattaaatattgcatgtcaggtttgagggtgttacata |
292 |
Q |
| |
|
|||||||||||||| || ||||||||||| ||| |||| || | ||| | ||||||| | |||| |||||||||||||||||||| |
|
|
| T |
14985 |
ttattgaaggcgtaacaccttgaaccttgtatttatctatttatttaatgctaaatatcgtatgtgaggtttgagggtgttacata |
15070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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