View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8911_low_114 (Length: 227)
Name: NF8911_low_114
Description: NF8911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8911_low_114 |
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Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 30631735 - 30631923
Alignment:
| Q |
22 |
ggggaagagacttacggaaattgacgaggaacaaaagctgaatctgatcggaaacggagtttggattacaattgagaaatgaatctgatcttcttcgctc |
121 |
Q |
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| T |
30631735 |
ggggaagagacttacggaaattgacgaggaacaaaagctgaatctgatcggaaacggagtttggattacaattgagaaatgaatctgatcttcttcgctc |
30631834 |
T |
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| Q |
122 |
tctggattcgattcgacgttgaagatcacgagaatcggtgaagttttcgcttcttttattgttcaacagccacgtatatttcgtatgtg |
210 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
30631835 |
tctggattcgattcgaggttgaagatcacgagaatcggtgaagttttcgcttcttttattgttcaacagccacgtatatttcgtctgtg |
30631923 |
T |
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