View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8911_low_115 (Length: 224)

Name: NF8911_low_115
Description: NF8911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8911_low_115
NF8911_low_115
[»] chr4 (10 HSPs)
chr4 (1-206)||(47282135-47282340)
chr4 (92-128)||(52726037-52726073)
chr4 (92-127)||(41633381-41633416)
chr4 (92-130)||(18375387-18375425)
chr4 (94-127)||(23348112-23348145)
chr4 (92-127)||(54021241-54021276)
chr4 (92-127)||(54358277-54358312)
chr4 (92-130)||(17847538-17847576)
chr4 (92-126)||(37674000-37674034)
chr4 (94-127)||(41497890-41497923)
[»] chr2 (8 HSPs)
chr2 (84-129)||(35676268-35676313)
chr2 (92-130)||(13686158-13686196)
chr2 (92-128)||(14940985-14941021)
chr2 (94-127)||(24413870-24413903)
chr2 (92-129)||(28429443-28429480)
chr2 (92-128)||(45093147-45093183)
chr2 (92-127)||(2752614-2752649)
chr2 (95-126)||(19899087-19899118)
[»] chr3 (5 HSPs)
chr3 (92-129)||(23642976-23643013)
chr3 (92-129)||(39145416-39145453)
chr3 (92-127)||(34624486-34624521)
chr3 (92-127)||(52546907-52546942)
chr3 (92-125)||(45166391-45166424)
[»] chr1 (10 HSPs)
chr1 (92-129)||(4624503-4624540)
chr1 (92-129)||(16255019-16255056)
chr1 (92-130)||(42480288-42480326)
chr1 (92-124)||(41647392-41647424)
chr1 (92-126)||(47550956-47550990)
chr1 (92-129)||(20809112-20809149)
chr1 (94-130)||(1270338-1270374)
chr1 (92-124)||(9098571-9098603)
chr1 (92-128)||(31032695-31032731)
chr1 (92-128)||(34476064-34476100)
[»] chr8 (10 HSPs)
chr8 (92-128)||(33889013-33889049)
chr8 (92-127)||(41322694-41322729)
chr8 (92-129)||(4824307-4824344)
chr8 (92-128)||(13357628-13357664)
chr8 (94-129)||(2001814-2001849)
chr8 (92-127)||(15561913-15561948)
chr8 (92-127)||(36473048-36473083)
chr8 (92-127)||(37919508-37919543)
chr8 (94-127)||(1416048-1416081)
chr8 (92-129)||(29314164-29314201)
[»] scaffold0339 (1 HSPs)
scaffold0339 (92-131)||(13407-13446)
[»] chr6 (3 HSPs)
chr6 (89-127)||(17366978-17367016)
chr6 (97-129)||(3835318-3835350)
chr6 (95-127)||(7646773-7646805)
[»] chr5 (6 HSPs)
chr5 (92-130)||(4391841-4391879)
chr5 (92-129)||(3456914-3456951)
chr5 (92-129)||(43141517-43141554)
chr5 (94-129)||(32891341-32891376)
chr5 (89-127)||(34286755-34286793)
chr5 (92-129)||(8692673-8692710)
[»] chr7 (2 HSPs)
chr7 (92-129)||(42195542-42195579)
chr7 (92-128)||(23991948-23991984)


Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47282135 - 47282340
Alignment:
Q  1 acattttaaccaactgaggaggtttgtggaaagacattaaggaaaggttctcggttgcaaatggccctagaatacaccaattgaaaacaaatcttgatgc 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||||| |||||||||||||||||||    
T  47282135 acattttaaccaactgaggaggtttgtgggaagacattaaggaaaggttctcggttgcgaatgatcctagaatacaccaactgaaaacaaatcttgatgc 47282234  T
Q  101 tatttttctagagaaatagcattttccttatgaaaaacatatcttgttgaagtatgttatgatatcacatacaatatgttgcatggtattcttttgatga 200  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  47282235 tatttttctagagaaatagcatttttcttatggaaaacatatcttgttgaagtatgttatgatatcacatgcaatatgttgcatggtattctttggatga 47282334  T
Q  201 gacatt 206  Q
    ||||||    
T  47282335 gacatt 47282340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 52726037 - 52726073
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    |||||||||||||||||||||||||||||||||||||    
T  52726037 tcttgatgctatttttctagagaaatagcattttcct 52726073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 41633381 - 41633416
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||||||||||||||    
T  41633381 tcttgatgctatttttctagagaaatagcattttcc 41633416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 18375425 - 18375387
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctta 130  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  18375425 tcttgatgctatttttctagagaaataacattttcctta 18375387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 23348145 - 23348112
Alignment:
Q  94 ttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||||||||||||    
T  23348145 ttgatgctatttttctagagaaatagcattttcc 23348112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 54021276 - 54021241
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||||| ||||||||    
T  54021276 tcttgatgctatttttctagagaaataacattttcc 54021241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 54358277 - 54358312
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||||| ||||||||    
T  54358277 tcttgatgctatttttctagagaaataacattttcc 54358312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 17847576 - 17847538
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctta 130  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  17847576 tcttgatgctatttttcgagagaaataacattttcctta 17847538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 37674034 - 37674000
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttc 126  Q
    ||||||||||||||||||||||||||| |||||||    
T  37674034 tcttgatgctatttttctagagaaatatcattttc 37674000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 41497923 - 41497890
Alignment:
Q  94 ttgatgctatttttctagagaaatagcattttcc 127  Q
    |||||||||||||| |||||||||||||||||||    
T  41497923 ttgatgctatttttttagagaaatagcattttcc 41497890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 35676313 - 35676268
Alignment:
Q  84 aaaacaaatcttgatgctatttttctagagaaatagcattttcctt 129  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  35676313 aaaaaaaatcttgatgctatttttctagagaaatagcattttcctt 35676268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 13686158 - 13686196
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctta 130  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13686158 tcttgatgctatttttctagagaaatagcattttcctta 13686196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 14941021 - 14940985
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    |||||||||||||||||||||||||||||||||||||    
T  14941021 tcttgatgctatttttctagagaaatagcattttcct 14940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 24413870 - 24413903
Alignment:
Q  94 ttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||||||||||||    
T  24413870 ttgatgctatttttctagagaaatagcattttcc 24413903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 28429443 - 28429480
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28429443 tcttgatgctatttttctaaagaaatagcattttcctt 28429480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 45093183 - 45093147
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    ||||||||||||||||||||||||||| |||||||||    
T  45093183 tcttgatgctatttttctagagaaataacattttcct 45093147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 2752649 - 2752614
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    |||||||||||||||||||||||||||||| |||||    
T  2752649 tcttgatgctatttttctagagaaatagcaatttcc 2752614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 126
Target Start/End: Original strand, 19899087 - 19899118
Alignment:
Q  95 tgatgctatttttctagagaaatagcattttc 126  Q
    ||||||||||||||||||||||||||||||||    
T  19899087 tgatgctatttttctagagaaatagcattttc 19899118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 23643013 - 23642976
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23643013 tcttgatgctatttttctagagaaatagcattttcctt 23642976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 39145416 - 39145453
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39145416 tcttgatgctatttttctagagaaatagcattttcctt 39145453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 34624521 - 34624486
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||||| ||||||||    
T  34624521 tcttgatgctatttttctagagaaataacattttcc 34624486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 52546907 - 52546942
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||| ||||||||||||||||||||||||||    
T  52546907 tcttgatgcaatttttctagagaaatagcattttcc 52546942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 45166391 - 45166424
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcatttt 125  Q
    ||||||||||||||||||||||||||| ||||||    
T  45166391 tcttgatgctatttttctagagaaataacatttt 45166424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 4624503 - 4624540
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4624503 tcttgatgctatttttctagagaaatagcattttcctt 4624540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 16255019 - 16255056
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16255019 tcttgatgctatttttctagagaaatagcattttcctt 16255056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 42480288 - 42480326
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctta 130  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  42480288 tcttgatgctatttttctagagaaataacattttcctta 42480326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 41647392 - 41647424
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattt 124  Q
    |||||||||||||||||||||||||||||||||    
T  41647392 tcttgatgctatttttctagagaaatagcattt 41647424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 47550956 - 47550990
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttc 126  Q
    ||||||||||||||||||||||||||| |||||||    
T  47550956 tcttgatgctatttttctagagaaataacattttc 47550990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 20809112 - 20809149
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    |||||||||||||||||||||||||||  |||||||||    
T  20809112 tcttgatgctatttttctagagaaataaaattttcctt 20809149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 1270338 - 1270374
Alignment:
Q  94 ttgatgctatttttctagagaaatagcattttcctta 130  Q
    |||||||||||||||||||||||||| | ||||||||    
T  1270338 ttgatgctatttttctagagaaatagtagtttcctta 1270374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 9098603 - 9098571
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattt 124  Q
    ||||||||||||||||||||||||| |||||||    
T  9098603 tcttgatgctatttttctagagaaaaagcattt 9098571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 31032731 - 31032695
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  31032731 tcttgatgctatttttctagaaaaataacattttcct 31032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 34476064 - 34476100
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  34476064 tcttgatactatttttctagagaaatagccttttcct 34476100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 33889013 - 33889049
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    |||||||||||||||||||||||||||||||||||||    
T  33889013 tcttgatgctatttttctagagaaatagcattttcct 33889049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 41322694 - 41322729
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||||||||||||||    
T  41322694 tcttgatgctatttttctagagaaatagcattttcc 41322729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 4824307 - 4824344
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    |||| |||||||||||||||||||||||||||||||||    
T  4824307 tcttaatgctatttttctagagaaatagcattttcctt 4824344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 13357664 - 13357628
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    ||||||||||||||||||||| |||||||||||||||    
T  13357664 tcttgatgctatttttctagataaatagcattttcct 13357628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 2001814 - 2001849
Alignment:
Q  94 ttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2001814 ttgatgctatttttctagagaaataacattttcctt 2001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 15561948 - 15561913
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||| ||||||||||||||    
T  15561948 tcttgatgctatttttctagataaatagcattttcc 15561913  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 36473083 - 36473048
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    |||||||| |||||||||||||||||||||||||||    
T  36473083 tcttgatgttatttttctagagaaatagcattttcc 36473048  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 37919543 - 37919508
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37919543 tcttgatactatttttctagagaaatagcattttcc 37919508  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 1416081 - 1416048
Alignment:
Q  94 ttgatgctatttttctagagaaatagcattttcc 127  Q
    ||||||||||||||||||||||||| ||||||||    
T  1416081 ttgatgctatttttctagagaaataacattttcc 1416048  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 29314164 - 29314201
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  29314164 tcttgatactatttttttagagaaatagcattttcctt 29314201  T

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Target: scaffold0339 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 13407 - 13446
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttccttat 131  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  13407 tcttgatgctatttttctagagaaatatcattttccttat 13446  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 17366978 - 17367016
Alignment:
Q  89 aaatcttgatgctatttttctagagaaatagcattttcc 127  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  17366978 aaattttgatgctatttttctagagaaatagcattttcc 17367016  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 3835318 - 3835350
Alignment:
Q  97 atgctatttttctagagaaatagcattttcctt 129  Q
    |||||||||||||||||||||| ||||||||||    
T  3835318 atgctatttttctagagaaataacattttcctt 3835350  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 127
Target Start/End: Complemental strand, 7646805 - 7646773
Alignment:
Q  95 tgatgctatttttctagagaaatagcattttcc 127  Q
    |||| ||||||||||||||||||||||||||||    
T  7646805 tgatactatttttctagagaaatagcattttcc 7646773  T

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Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 4391879 - 4391841
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctta 130  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  4391879 tcttgatgctatttttctagagaaattgcattttcctta 4391841  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 3456914 - 3456951
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  3456914 tcttgatgctatttttctagaaaaatagcattttcctt 3456951  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 43141554 - 43141517
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  43141554 tcttgatgctatttttctagagaaataacattttcctt 43141517  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 32891341 - 32891376
Alignment:
Q  94 ttgatgctatttttctagagaaatagcattttcctt 129  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32891341 ttgatgctatttttctagataaatagcattttcctt 32891376  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 34286755 - 34286793
Alignment:
Q  89 aaatcttgatgctatttttctagagaaatagcattttcc 127  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  34286755 aaattttgatgctatttttctagagaaataacattttcc 34286793  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 8692673 - 8692710
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  8692673 tcttgatgctatttttttagagaaataacattttcctt 8692710  T

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Target: chr7 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 42195542 - 42195579
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcctt 129  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  42195542 tcttgatgttatttttctagagaaataacattttcctt 42195579  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 23991984 - 23991948
Alignment:
Q  92 tcttgatgctatttttctagagaaatagcattttcct 128  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  23991984 tcttgatactatgtttctagagaaatagcattttcct 23991948  T

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