View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8911_low_68 (Length: 387)

Name: NF8911_low_68
Description: NF8911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8911_low_68
NF8911_low_68
[»] chr1 (53 HSPs)
chr1 (156-253)||(32572942-32573039)
chr1 (156-253)||(40264050-40264147)
chr1 (130-258)||(17502196-17502324)
chr1 (164-253)||(37214869-37214957)
chr1 (156-235)||(34756465-34756544)
chr1 (178-253)||(15245462-15245537)
chr1 (156-251)||(23536109-23536204)
chr1 (130-235)||(5474415-5474520)
chr1 (156-235)||(50005117-50005196)
chr1 (156-258)||(27935501-27935602)
chr1 (130-235)||(45565432-45565537)
chr1 (130-253)||(34007360-34007478)
chr1 (156-235)||(38277453-38277532)
chr1 (132-253)||(34007358-34007474)
chr1 (156-235)||(15034697-15034776)
chr1 (156-235)||(4038117-4038196)
chr1 (152-235)||(27804303-27804386)
chr1 (132-253)||(17502200-17502321)
chr1 (190-258)||(32128045-32128113)
chr1 (189-253)||(48953589-48953652)
chr1 (189-253)||(50471770-50471834)
chr1 (152-235)||(28745835-28745917)
chr1 (199-253)||(45565479-45565533)
chr1 (189-253)||(41823149-41823213)
chr1 (156-235)||(44410349-44410428)
chr1 (198-253)||(5474419-5474474)
chr1 (189-250)||(37447348-37447409)
chr1 (189-250)||(44571225-44571285)
chr1 (198-253)||(47074156-47074210)
chr1 (198-235)||(15034743-15034780)
chr1 (198-235)||(23536105-23536142)
chr1 (163-200)||(25889206-25889243)
chr1 (198-235)||(27935569-27935606)
chr1 (130-167)||(38277413-38277450)
chr1 (189-253)||(41822532-41822596)
chr1 (134-202)||(47074156-47074223)
chr1 (189-231)||(946955-946997)
chr1 (189-235)||(24273209-24273255)
chr1 (189-235)||(26501068-26501114)
chr1 (137-167)||(28745920-28745950)
chr1 (189-235)||(47165201-47165247)
chr1 (202-235)||(4038113-4038146)
chr1 (186-235)||(6470672-6470721)
chr1 (224-253)||(15034787-15034816)
chr1 (224-253)||(23536069-23536098)
chr1 (224-253)||(24273262-24273291)
chr1 (198-235)||(30190220-30190257)
chr1 (224-253)||(30190264-30190293)
chr1 (224-257)||(40264158-40264191)
chr1 (189-253)||(13181608-13181672)
chr1 (156-216)||(30190193-30190253)
chr1 (189-233)||(32647341-32647385)
chr1 (189-249)||(52135614-52135674)
[»] chr4 (54 HSPs)
chr4 (156-258)||(26250951-26251053)
chr4 (156-235)||(15660225-15660304)
chr4 (163-235)||(10128023-10128095)
chr4 (156-235)||(857277-857356)
chr4 (198-253)||(4441412-4441467)
chr4 (189-253)||(42775625-42775689)
chr4 (156-235)||(28845909-28845988)
chr4 (156-231)||(42844585-42844660)
chr4 (130-235)||(14982318-14982422)
chr4 (134-202)||(46724195-46724263)
chr4 (164-255)||(11041017-11041107)
chr4 (198-253)||(14982363-14982418)
chr4 (163-235)||(1107101-1107173)
chr4 (163-231)||(41498532-41498600)
chr4 (189-253)||(53760779-53760843)
chr4 (156-235)||(7352850-7352929)
chr4 (176-235)||(36455945-36456004)
chr4 (189-253)||(40548207-40548271)
chr4 (132-235)||(26250947-26251050)
chr4 (176-258)||(12914060-12914142)
chr4 (189-247)||(17727091-17727149)
chr4 (189-251)||(40338241-40338303)
chr4 (189-235)||(41139511-41139557)
chr4 (189-258)||(56339148-56339217)
chr4 (133-205)||(4441396-4441468)
chr4 (190-253)||(21012566-21012629)
chr4 (198-257)||(46724208-46724267)
chr4 (129-180)||(54566187-54566238)
chr4 (189-258)||(26534503-26534577)
chr4 (189-235)||(29091175-29091221)
chr4 (220-253)||(1112607-1112640)
chr4 (198-235)||(4896716-4896753)
chr4 (190-235)||(16300209-16300254)
chr4 (202-253)||(32724932-32724986)
chr4 (195-231)||(36456007-36456043)
chr4 (189-253)||(46243086-46243148)
chr4 (156-212)||(49111373-49111429)
chr4 (189-253)||(52295034-52295098)
chr4 (196-235)||(1112704-1112743)
chr4 (127-178)||(12914093-12914144)
chr4 (189-235)||(1539679-1539725)
chr4 (224-258)||(31473846-31473880)
chr4 (189-235)||(31473887-31473933)
chr4 (224-258)||(49111440-49111474)
chr4 (198-235)||(857323-857360)
chr4 (224-253)||(7352814-7352843)
chr4 (198-235)||(28845955-28845992)
chr4 (224-253)||(36455909-36455938)
chr4 (198-235)||(49111396-49111433)
chr4 (199-235)||(1112643-1112679)
chr4 (224-252)||(10633035-10633063)
chr4 (226-258)||(16516168-16516200)
chr4 (201-253)||(54566192-54566244)
chr4 (191-231)||(55266852-55266892)
[»] chr3 (46 HSPs)
chr3 (163-253)||(46429416-46429506)
chr3 (156-235)||(31070444-31070523)
chr3 (132-253)||(331993-332114)
chr3 (132-253)||(25655315-25655436)
chr3 (156-253)||(28092256-28092353)
chr3 (156-251)||(27251916-27252011)
chr3 (165-253)||(39215859-39215946)
chr3 (156-231)||(47284268-47284343)
chr3 (130-253)||(25655317-25655440)
chr3 (156-235)||(44436296-44436375)
chr3 (156-235)||(44692860-44692939)
chr3 (123-258)||(331990-332125)
chr3 (189-253)||(2104754-2104818)
chr3 (205-253)||(27485474-27485522)
chr3 (156-235)||(9129382-9129461)
chr3 (156-235)||(9137489-9137568)
chr3 (136-235)||(27251916-27252015)
chr3 (186-253)||(38506861-38506928)
chr3 (189-253)||(54761552-54761616)
chr3 (186-253)||(47284188-47284255)
chr3 (189-253)||(9007443-9007507)
chr3 (156-235)||(5415825-5415904)
chr3 (156-231)||(42130734-42130809)
chr3 (189-235)||(21307520-21307566)
chr3 (197-235)||(46672799-46672837)
chr3 (198-235)||(9129428-9129465)
chr3 (198-235)||(9137535-9137572)
chr3 (198-235)||(37321588-37321625)
chr3 (130-235)||(39215855-39215959)
chr3 (198-235)||(44436342-44436379)
chr3 (198-235)||(44692906-44692943)
chr3 (130-234)||(28092253-28092357)
chr3 (132-180)||(47284209-47284257)
chr3 (162-205)||(39110442-39110485)
chr3 (189-235)||(19475854-19475900)
chr3 (224-258)||(46672844-46672878)
chr3 (193-235)||(49457381-49457423)
chr3 (220-249)||(28092220-28092249)
chr3 (224-253)||(36398030-36398059)
chr3 (224-253)||(42005994-42006023)
chr3 (224-253)||(44436260-44436289)
chr3 (224-253)||(44692824-44692853)
chr3 (224-253)||(47767434-47767463)
chr3 (224-253)||(49457345-49457374)
chr3 (189-237)||(26323392-26323440)
chr3 (217-253)||(37321619-37321655)
[»] chr8 (38 HSPs)
chr8 (136-253)||(42739951-42740068)
chr8 (161-235)||(3853654-3853728)
chr8 (161-235)||(3858112-3858186)
chr8 (156-235)||(13404869-13404948)
chr8 (138-253)||(38573420-38573539)
chr8 (156-235)||(17110911-17110990)
chr8 (189-253)||(34008801-34008865)
chr8 (189-253)||(29611390-29611454)
chr8 (189-253)||(30444932-30444996)
chr8 (189-252)||(26520438-26520501)
chr8 (156-253)||(42711306-42711397)
chr8 (130-235)||(14799977-14800081)
chr8 (176-253)||(30435307-30435383)
chr8 (175-235)||(4156228-4156288)
chr8 (23-118)||(4221699-4221799)
chr8 (199-253)||(7202867-7202921)
chr8 (129-257)||(42739946-42740074)
chr8 (209-253)||(7202923-7202967)
chr8 (186-258)||(24510273-24510345)
chr8 (129-177)||(36625245-36625293)
chr8 (202-253)||(14799981-14800031)
chr8 (198-257)||(38573412-38573470)
chr8 (189-253)||(8469517-8469581)
chr8 (189-253)||(34388528-34388591)
chr8 (129-167)||(11744767-11744805)
chr8 (189-235)||(13144621-13144667)
chr8 (189-235)||(15186816-15186862)
chr8 (189-235)||(23011772-23011818)
chr8 (224-254)||(29482859-29482889)
chr8 (190-235)||(33902705-33902748)
chr8 (189-231)||(35404741-35404783)
chr8 (189-235)||(44889392-44889438)
chr8 (224-253)||(14991694-14991723)
chr8 (198-235)||(17110907-17110944)
chr8 (224-253)||(29257403-29257432)
chr8 (198-235)||(32626029-32626066)
chr8 (224-253)||(33377349-33377378)
chr8 (198-235)||(42711364-42711401)
[»] chr7 (49 HSPs)
chr7 (162-253)||(40853989-40854080)
chr7 (161-253)||(46069406-46069503)
chr7 (156-235)||(29065857-29065936)
chr7 (156-235)||(5644715-5644794)
chr7 (156-235)||(21635927-21636006)
chr7 (164-235)||(49052835-49052906)
chr7 (189-253)||(30080776-30080840)
chr7 (190-253)||(19865530-19865593)
chr7 (189-253)||(30587878-30587942)
chr7 (186-253)||(31913238-31913305)
chr7 (189-253)||(32650593-32650657)
chr7 (156-235)||(40110775-40110855)
chr7 (163-235)||(44915244-44915316)
chr7 (189-253)||(13814969-13815033)
chr7 (189-253)||(14790134-14790197)
chr7 (156-235)||(2057437-2057516)
chr7 (152-235)||(34388303-34388386)
chr7 (176-235)||(46481984-46482043)
chr7 (224-258)||(43955642-43955676)
chr7 (186-235)||(31632760-31632809)
chr7 (198-235)||(40110822-40110859)
chr7 (189-253)||(40495252-40495314)
chr7 (189-233)||(23548586-23548630)
chr7 (189-253)||(45984360-45984424)
chr7 (189-253)||(45988720-45988784)
chr7 (216-258)||(31913300-31913343)
chr7 (189-235)||(3905634-3905680)
chr7 (189-235)||(26162112-26162158)
chr7 (189-235)||(29639190-29639236)
chr7 (224-258)||(35455801-35455835)
chr7 (189-235)||(43791128-43791174)
chr7 (133-191)||(45984359-45984417)
chr7 (133-191)||(45988719-45988777)
chr7 (202-235)||(2057433-2057466)
chr7 (224-253)||(14603290-14603319)
chr7 (224-253)||(26162165-26162194)
chr7 (224-253)||(28539196-28539225)
chr7 (224-253)||(31632724-31632753)
chr7 (224-253)||(34398977-34399006)
chr7 (224-253)||(39342670-39342699)
chr7 (224-253)||(40110739-40110768)
chr7 (224-253)||(43955519-43955548)
chr7 (194-235)||(43955555-43955596)
chr7 (198-235)||(44915233-44915270)
chr7 (225-253)||(2057397-2057425)
chr7 (129-177)||(31913233-31913281)
chr7 (210-254)||(36328794-36328838)
chr7 (189-253)||(40667361-40667425)
chr7 (130-166)||(44915193-44915229)
[»] chr2 (45 HSPs)
chr2 (151-235)||(27033528-27033612)
chr2 (138-253)||(11824704-11824819)
chr2 (156-253)||(14537241-14537338)
chr2 (132-253)||(3345765-3345887)
chr2 (156-235)||(41461557-41461636)
chr2 (130-235)||(10244215-10244320)
chr2 (190-255)||(11607239-11607304)
chr2 (163-235)||(784842-784914)
chr2 (189-253)||(8736430-8736494)
chr2 (198-253)||(11684674-11684729)
chr2 (190-255)||(11595337-11595402)
chr2 (186-253)||(21504470-21504537)
chr2 (129-207)||(11684656-11684734)
chr2 (189-258)||(20935722-20935790)
chr2 (186-235)||(40026102-40026151)
chr2 (198-249)||(11824704-11824755)
chr2 (132-235)||(14537237-14537340)
chr2 (198-250)||(3345829-3345882)
chr2 (156-235)||(14365742-14365820)
chr2 (190-235)||(14954343-14954388)
chr2 (189-253)||(41585679-41585743)
chr2 (189-253)||(44205647-44205711)
chr2 (202-253)||(10244265-10244316)
chr2 (189-235)||(11532242-11532288)
chr2 (198-235)||(11716446-11716483)
chr2 (198-235)||(14365738-14365775)
chr2 (220-253)||(35047717-35047750)
chr2 (189-249)||(32840181-32840241)
chr2 (156-207)||(11716450-11716501)
chr2 (216-251)||(19231301-19231336)
chr2 (189-235)||(11793933-11793979)
chr2 (189-235)||(32839637-32839683)
chr2 (224-253)||(769038-769067)
chr2 (224-253)||(1583851-1583880)
chr2 (132-181)||(8736447-8736496)
chr2 (224-253)||(10480121-10480150)
chr2 (224-253)||(11141307-11141336)
chr2 (224-253)||(14365702-14365731)
chr2 (224-253)||(14537201-14537230)
chr2 (224-253)||(33189299-33189328)
chr2 (224-253)||(41461643-41461672)
chr2 (189-233)||(3092322-3092366)
chr2 (132-180)||(6749175-6749223)
chr2 (224-256)||(11793894-11793926)
chr2 (189-233)||(44255674-44255718)
[»] chr6 (12 HSPs)
chr6 (130-235)||(9285685-9285790)
chr6 (156-235)||(9763050-9763129)
chr6 (156-235)||(776122-776201)
chr6 (190-253)||(1195353-1195416)
chr6 (189-253)||(8475181-8475245)
chr6 (156-235)||(6919750-6919828)
chr6 (198-253)||(9285731-9285786)
chr6 (198-235)||(6919746-6919783)
chr6 (189-235)||(28918203-28918249)
chr6 (224-258)||(33733429-33733463)
chr6 (224-253)||(6919835-6919864)
chr6 (199-235)||(15299510-15299546)
[»] chr5 (56 HSPs)
chr5 (189-253)||(22305114-22305178)
chr5 (156-253)||(28828369-28828464)
chr5 (189-253)||(33146193-33146257)
chr5 (186-253)||(15270837-15270904)
chr5 (152-235)||(20523171-20523254)
chr5 (199-253)||(2550330-2550384)
chr5 (156-235)||(9764376-9764455)
chr5 (156-235)||(15374002-15374081)
chr5 (134-235)||(40643838-40643938)
chr5 (186-247)||(17542344-17542405)
chr5 (156-220)||(6634057-6634120)
chr5 (189-253)||(28490013-28490076)
chr5 (156-235)||(40809383-40809462)
chr5 (190-251)||(28489485-28489546)
chr5 (189-258)||(34105086-34105155)
chr5 (189-253)||(12064454-12064518)
chr5 (156-231)||(32390014-32390089)
chr5 (156-235)||(32470920-32470999)
chr5 (206-257)||(40643834-40643885)
chr5 (186-235)||(3563315-3563364)
chr5 (200-253)||(34982293-34982346)
chr5 (164-231)||(2316420-2316488)
chr5 (189-235)||(22766990-22767036)
chr5 (189-235)||(25935276-25935322)
chr5 (189-235)||(37722880-37722926)
chr5 (198-235)||(15373998-15374035)
chr5 (198-235)||(32390056-32390093)
chr5 (216-253)||(33146063-33146100)
chr5 (220-253)||(40090449-40090482)
chr5 (195-235)||(16515099-16515139)
chr5 (200-235)||(2721557-2721592)
chr5 (224-255)||(2721599-2721630)
chr5 (210-253)||(22302541-22302584)
chr5 (196-235)||(26281262-26281301)
chr5 (190-232)||(12479948-12479990)
chr5 (224-258)||(13243532-13243566)
chr5 (224-258)||(22766949-22766983)
chr5 (189-251)||(37241096-37241157)
chr5 (189-235)||(40090400-40090446)
chr5 (224-253)||(2316380-2316409)
chr5 (198-235)||(2316463-2316500)
chr5 (202-235)||(9764426-9764459)
chr5 (224-253)||(15374088-15374117)
chr5 (224-253)||(15804324-15804353)
chr5 (130-167)||(16515142-16515179)
chr5 (189-234)||(17492634-17492679)
chr5 (224-253)||(22303909-22303938)
chr5 (224-253)||(25935329-25935358)
chr5 (198-235)||(32470966-32471003)
chr5 (224-253)||(40643945-40643974)
chr5 (198-235)||(40809379-40809416)
chr5 (224-253)||(41762254-41762283)
chr5 (196-232)||(16515045-16515081)
chr5 (224-256)||(19533946-19533978)
chr5 (225-253)||(20523262-20523290)
chr5 (123-167)||(32390096-32390140)
[»] scaffold0240 (1 HSPs)
scaffold0240 (176-253)||(17561-17638)
[»] scaffold0044 (2 HSPs)
scaffold0044 (127-235)||(56282-56395)
scaffold0044 (202-253)||(56289-56345)
[»] scaffold0039 (1 HSPs)
scaffold0039 (189-258)||(109046-109115)
[»] scaffold1562 (3 HSPs)
scaffold1562 (156-235)||(443-522)
scaffold1562 (224-257)||(533-566)
scaffold1562 (202-235)||(493-526)
[»] scaffold1158 (3 HSPs)
scaffold1158 (156-235)||(2071-2150)
scaffold1158 (224-257)||(2027-2060)
scaffold1158 (202-235)||(2067-2100)
[»] scaffold0169 (1 HSPs)
scaffold0169 (189-235)||(4113-4159)
[»] scaffold0009 (1 HSPs)
scaffold0009 (194-235)||(42035-42076)
[»] scaffold0048 (1 HSPs)
scaffold0048 (191-235)||(82981-83025)
[»] scaffold0337 (1 HSPs)
scaffold0337 (189-253)||(16363-16429)
[»] scaffold0400 (1 HSPs)
scaffold0400 (189-235)||(4487-4533)
[»] scaffold0365 (1 HSPs)
scaffold0365 (189-235)||(5131-5177)
[»] scaffold0027 (1 HSPs)
scaffold0027 (189-235)||(10924-10970)
[»] scaffold0065 (1 HSPs)
scaffold0065 (189-253)||(9575-9640)


Alignment Details
Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 32573039 - 32572942
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32573039 ttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattcccccatccaaacacact 32572942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 40264147 - 40264050
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  40264147 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattccctcaaaacattcccctatccaaacacact 40264050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 17502196 - 17502324
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||||||||| ||||||||| || |||||||| || |||||| || ||||||| ||||||||||| || |||||||||||||| ||||||    
T  17502196 taagagtgtgtttggatgagggaatattttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaa 17502295  T
Q  230 aacattcccccatccaaacacactataaa 258  Q
    |||||||||| ||| ||||||||| ||||    
T  17502296 aacattccccaatcaaaacacactctaaa 17502324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 37214869 - 37214957
Alignment:
Q  164 gaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  37214869 gaattcaattattttgaggtggattcaaacaatagaattcacctc-aagtagttgaattccctcaaaacattctcccatccaaacacact 37214957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 34756544 - 34756465
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34756544 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 34756465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 15245537 - 15245462
Alignment:
Q  178 tgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  15245537 tgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattcccccatccaaacacact 15245462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 23536109 - 23536204
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacaca 251  Q
    |||| ||||||||||| || |||||| || |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  23536109 ttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacattcccccatccaaacaca 23536204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 5474415 - 5474520
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||||||| | |||| |||| |||||||| ||||| |||||  || |||||||||||||||||||||| |||||||||||||| ||||||    
T  5474415 taagagtgtgtttggatgggggaatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaa 5474514  T
Q  230 aacatt 235  Q
    ||||||    
T  5474515 aacatt 5474520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 50005196 - 50005117
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  50005196 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacatt 50005117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 27935602 - 27935501
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactat 255  Q
    |||| ||| ||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||| |    
T  27935602 ttttgaggaaattcaactactttgagttgaattcaaacaatagaattcacctgaaagtagttgaattttctcaaaacatt-tcccatccaaacacactct 27935504  T
Q  256 aaa 258  Q
    |||    
T  27935503 aaa 27935501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 45565537 - 45565432
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    ||||||||||||||||||  ||||| |||| ||||||||||| || |||||| || ||| |||||||||||||||||| ||| |||||||||| ||||||    
T  45565537 taagagtgtgtttggatggaagaatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaa 45565438  T
Q  230 aacatt 235  Q
    ||||||    
T  45565437 aacatt 45565432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 34007478 - 34007360
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||||||| |  |||||||| ||||||||||| || ||||||||| ||||||      ||||||| ||||||||||||||||| ||||||    
T  34007478 taagagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattcaat-----gaattcaactcaaagtagttgaattccctcaa 34007384  T
Q  230 aacattcccccatccaaacacact 253  Q
    || ||| |||||||||||||||||    
T  34007383 aatatttccccatccaaacacact 34007360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 38277532 - 38277453
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| | ||||||||||    
T  38277532 ttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtagttgaattccttcaaaacatt 38277453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 34007358 - 34007474
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||||||||||||||| |  |||||||| ||||||||||| || ||||||||| |||||     | ||||||| ||||||||||||||||| ||||||||    
T  34007358 agagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattca-----ttgaattcaactcaaagtagttgaattccctcaaaa 34007452  T
Q  232 cattcccccatccaaacacact 253  Q
     ||| |||||||||||||||||    
T  34007453 tatttccccatccaaacacact 34007474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 15034776 - 15034697
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  15034776 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15034697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 4038117 - 4038196
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  4038117 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 4038196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 27804303 - 27804386
Alignment:
Q  152 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||| ||||||||| || ||||||||||||||||||| || |||||||||||||| | || |||||||    
T  27804303 aatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccttctaaacatt 27804386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 253
Target Start/End: Complemental strand, 17502321 - 17502200
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    ||||||||||| |||  | |||| |||| ||||||||||| || ||| ||||| |||| |  | | |||||||||||||||||||||||||  |||||||    
T  17502321 agagtgtgttttgattggggaatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T
Q  232 cattcccccatccaaacacact 253  Q
     |||||| ||||||||||||||    
T  17502221 tattccctcatccaaacacact 17502200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 32128113 - 32128045
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataaa 258  Q
    ||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacattcccccatctaaacacactctaaa 32128045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 48953652 - 48953589
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||||||||    
T  48953652 caaacaatagaattcacctcaaa-tatttgaattccttcaaaacattcccccatccaaacacact 48953589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 50471834 - 50471770
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||| ||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||    
T  50471834 caaacaataaaattcacctgaaagtatttgaattccctcaaaactttcccccatccaaacacact 50471770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 28745917 - 28745835
Alignment:
Q  152 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||| ||||||||| || |||||||||||||||||||||| ||| || ||||||| ||||||| ||||    
T  28745917 aatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaa-taattgaattccctcaaaccatt 28745835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 45565479 - 45565533
Alignment:
Q  199 aattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  45565479 aattcacctcaaagtagttgaattccctcaaaacattcttccatccaaacacact 45565533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 41823149 - 41823213
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||| ||||| ||| ||||||| | ||||||||||||||||||||||||||||    
T  41823149 caaacaatggaattcatctcaaggtatttgaattccttcaaaacattcccccatccaaacacact 41823213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 44410428 - 44410349
Alignment:
Q  156 ttttaagggaattcaattatttt-gagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||  || ||||||||    
T  44410428 ttttgagggaattcaattatttttgagt-ggattcagacaatagaattcacctcaaaatagttgaattcgcttaaaacatt 44410349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 5474474 - 5474419
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| |||||||| || |||| ||||||||||||||||||||||||||||||    
T  5474474 gaattcacttcaaagtaattaaattccctcaaaacattcccccatccaaacacact 5474419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 37447348 - 37447409
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacac 250  Q
    |||||||| |||||||| |||||||| |||||||  ||||||||||||||| ||||||||||    
T  37447348 caaacaatggaattcacatcaaagtatttgaattctctcaaaacattcccctatccaaacac 37447409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 44571285 - 44571225
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacac 250  Q
    |||||||| |||||||| |||||||| ||||||| |||||||||||| ||||||||||||||    
T  44571285 caaacaatggaattcacttcaaagtatttgaattccctcaaaacatt-ccccatccaaacac 44571225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 47074210 - 47074156
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||| | |||||| ||| |||||||||||||||||    
T  47074210 gaattcacctcaaagtagttgaattccttcaaaatatt-ccccatccaaacacact 47074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 15034743 - 15034780
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  15034743 gaattcacctcaaagtagttgaattccctcaaaacatt 15034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 23536142 - 23536105
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  23536142 gaattcacctcaaagtagttgaattccctcaaaacatt 23536105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 25889206 - 25889243
Alignment:
Q  163 ggaattcaattattttgagttggattcaaacaatagaa 200  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  25889206 ggaattcaattattttgaggtggattcaaacaatagaa 25889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 27935569 - 27935606
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacatt 27935606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 38277413 - 38277450
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaat 167  Q
    |||||||||||||||||||||||||||||| |||||||    
T  38277413 taagagtgtgtttggatgagagaatattttgagggaat 38277450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 41822532 - 41822596
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||| || |||||| ||||||| |||||||||||||   ||||||||||||||    
T  41822532 caaacaatggaattcatcttaaagtatttgaattccctcaaaacattcattcatccaaacacact 41822596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 47074156 - 47074223
Alignment:
Q  134 agtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaatt 202  Q
    |||||||||||||| | ||||||||| | ||||||||| || |||||| || |||||||||||||||||    
T  47074156 agtgtgtttggatggg-gaatattttgaaggaattcaactactttgaggtgaattcaaacaatagaatt 47074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 946997 - 946955
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||||||| |||||||||||| |||| ||||||||||||||||    
T  946997 caaacaatggaattcacctcatagtatttgaatttcctcaaaa 946955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 24273209 - 24273255
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacatt 24273255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 26501068 - 26501114
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 26501114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 167
Target Start/End: Complemental strand, 28745950 - 28745920
Alignment:
Q  137 gtgtttggatgagagaatattttaagggaat 167  Q
    |||||||||||||||||||||||||||||||    
T  28745950 gtgtttggatgagagaatattttaagggaat 28745920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 47165201 - 47165247
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| |||||||||| |||||| ||||||| ||||||||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacatt 47165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 4038146 - 4038113
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||| ||||||||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacatt 4038113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 6470672 - 6470721
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||| |||| |||||||||| | ||||||| ||||||||||||    
T  6470672 attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacatt 6470721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 15034787 - 15034816
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  15034787 cctcaaaacattcccccatccaaacacact 15034816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 23536098 - 23536069
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  23536098 cctcaaaacattcccccatccaaacacact 23536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 24273262 - 24273291
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  24273262 cctcaaaacattcccccatccaaacacact 24273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 30190220 - 30190257
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacatt 30190257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 30190264 - 30190293
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  30190264 cctcaaaacattcccccatccaaacacact 30190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 40264158 - 40264191
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataa 257  Q
    |||||||| |||||||||||||||||||||||||    
T  40264158 cctcaaaatattcccccatccaaacacactataa 40264191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 13181672 - 13181608
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| |||| |||| | ||||||||| ||||||| |||||||| ||||  |||||||||||||||    
T  13181672 caaaaaatataattaatctcaaagtatttgaattccctcaaaagattcttccatccaaacacact 13181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 30190253 - 30190193
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagt 216  Q
    |||| ||| ||||||| ||||||||| || |||||||||||||||||| ||| | ||||||    
T  30190253 ttttgaggtaattcaactattttgaggtgaattcaaacaatagaattccccttagagtagt 30190193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 32647385 - 32647341
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaaca 233  Q
    |||||||| | ||||||| ||||||| ||||||||||||||||||    
T  32647385 caaacaatggtattcaccccaaagtatttgaatttcctcaaaaca 32647341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 52135614 - 52135674
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaaca 249  Q
    ||||||||| |||| |||| ||| || ||||||| |||||||||||| | |||||||||||    
T  52135614 caaacaataaaatttacctaaaaatatttgaattccctcaaaacatttctccatccaaaca 52135674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 8e-37; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 26250951 - 26251053
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactat 255  Q
    |||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  26250951 ttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagtagttgaattccctcaaaacattcccccatccaaacacactct 26251050  T
Q  256 aaa 258  Q
    |||    
T  26251051 aaa 26251053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 15660225 - 15660304
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  15660225 ttttgagggaattcaattattttgagatggattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacatt 15660304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 10128023 - 10128095
Alignment:
Q  163 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  10128023 ggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattccctcaaaacatt 10128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 857356 - 857277
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  857356 ttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 857277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 4441412 - 4441467
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4441412 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 4441467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 42775689 - 42775625
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattcccccatccaaacacact 42775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 28845988 - 28845909
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| |||| |||||||    
T  28845988 ttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcgaaacatt 28845909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 42844660 - 42844585
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||| |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  42844660 ttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtagttgaattccttcaaaa 42844585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 14982422 - 14982318
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||||||| | |||| |||| ||||||||||| || |||||| || ||||||| |||| ||||||||| ||||||||| |||| ||||||    
T  14982422 taagagtgtgtttggatgggggaatcttttgagggaattcaactactttgaggtgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaa 14982324  T
Q  230 aacatt 235  Q
    ||||||    
T  14982323 aacatt 14982318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 46724263 - 46724195
Alignment:
Q  134 agtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaatt 202  Q
    |||||||||||||| |  |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  46724263 agtgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattcaaacaatagaatt 46724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 11041017 - 11041107
Alignment:
Q  164 gaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactat 255  Q
    |||||||| || |||||| || || ||||||||||||||||||  |||||||||||||| |||||||||||| ||||| |||||||||||||    
T  11041017 gaattcaactactttgaggtgaatccaaacaatagaattcaccataaagtagttgaattccctcaaaacatt-ccccaaccaaacacactat 11041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 14982363 - 14982418
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  14982363 gaattcacctcaaagtagttgaattccctcaaaagattcccccatccaaacacact 14982418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 1107101 - 1107173
Alignment:
Q  163 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||| || |||||| || |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  1107101 ggaattcaactactttgagatgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacatt 1107173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 41498600 - 41498532
Alignment:
Q  163 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    ||||||||||||||||||| || ||| |||||||||||||||||| ||||| |||||||| ||||||||    
T  41498600 ggaattcaattattttgaggtgaatttaaacaatagaattcaccttaaagtggttgaattccctcaaaa 41498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 53760779 - 53760843
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||| ||||| || ||||||| ||||||||||||||||||| ||||||||||    
T  53760779 caaacaatagaattcacatcaaaatatttgaattccctcaaaacattcccccattcaaacacact 53760843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 7352929 - 7352850
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || ||||| ||| |||||||||||||||||||||| ||| |||||||||| | ||||||||||    
T  7352929 ttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatagttgaattccatcaaaacatt 7352850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 36456004 - 36455945
Alignment:
Q  176 tttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||| || |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  36456004 tttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 36455945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 40548207 - 40548271
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||  | ||||||||||||||    
T  40548207 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacattttctcatccaaacacact 40548271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 26251050 - 26250947
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||||||||||||||| | |||| |||| ||||||||||| || |||||| || |||| |  | | |||| ||||||||| || ||||||||||||||||    
T  26251050 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaa 26250951  T
Q  232 catt 235  Q
    ||||    
T  26250950 catt 26250947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 12914060 - 12914142
Alignment:
Q  176 tttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||| || |||||||||||| |||||| || ||| |||||||||| ||||||||||||  | |||||||||||||| ||||    
T  12914060 tttgaggtgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacattttctcatccaaacacactctaaa 12914142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 17727149 - 17727091
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaa 247  Q
    ||||||||  |||||||||||||||| ||||||| || |||||||||||||||||||||    
T  17727149 caaacaatgaaattcacctcaaagtatttgaattcccacaaaacattcccccatccaaa 17727091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 40338241 - 40338303
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacaca 251  Q
    ||||||||  |||||||||||||||| ||||||| | ||||||||||||| ||||||||||||    
T  40338241 caaacaatgaaattcacctcaaagtatttgaattccatcaaaacattccctcatccaaacaca 40338303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 41139557 - 41139511
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacatt 41139511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 56339217 - 56339148
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataaa 258  Q
    ||||||||  ||||||| |||||||| ||||||| ||||||||||||||  |||||||||||||| ||||    
T  56339217 caaacaatgaaattcacatcaaagtatttgaattccctcaaaacattccatcatccaaacacactctaaa 56339148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 4441468 - 4441396
Alignment:
Q  133 gagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcac 205  Q
    ||||||||||||||| | |||| |||| ||| ||||||| || |||||| || ||||||||||||||||||||    
T  4441468 gagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcac 4441396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 21012566 - 21012629
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||| |||||||||||||| || || |||| |||||||||||||  |||||||||||||||    
T  21012566 aaacaatggaattcacctcaaaatatttaaattccctcaaaacattcgtccatccaaacacact 21012629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 46724208 - 46724267
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataa 257  Q
    |||| ||||||||| || ||||||| |||||||| ||| |||||||||||||||||||||    
T  46724208 gaatccacctcaaaataattgaattccctcaaaatatttccccatccaaacacactataa 46724267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 54566187 - 54566238
Alignment:
Q  129 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattttga 180  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||| |||||    
T  54566187 ttaagagtgtgtttggatgaaagaatgttttgagggaattcaattactttga 54566238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 26534577 - 26534503
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaa-----cattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||  ||||||| ||||||| ||||||||     |||||||||||||||||||||| ||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattcccccatccaaacacactctaaa 26534503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 29091221 - 29091175
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacatt 29091175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 1112640 - 1112607
Alignment:
Q  220 atttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||||||    
T  1112640 atttcctcaaaacattcccccatccaaacacact 1112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 4896716 - 4896753
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacatt 4896753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 16300209 - 16300254
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacatt 16300254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 32724986 - 32724932
Alignment:
Q  202 tcacctcaaagtagttgaatt---tcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||| |||||||   |||||||||||||||||||| ||||||||||    
T  32724986 tcacctcaaagtaattgaattccctcctcaaaacattcccccattcaaacacact 32724932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 36456007 - 36456043
Alignment:
Q  195 atagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaa 36456043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 46243086 - 46243148
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||| |||||||| || |||||||  |||||||||||||||||||||||||||||    
T  46243086 caaacaatggaatt-acctcaaa-tatttgaattctctcaaaacattcccccatccaaacacact 46243148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 49111429 - 49111373
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaag 212  Q
    |||| ||||||||||| ||||||||| || |||||||||||||||||| ||| ||||    
T  49111429 ttttgagggaattcaactattttgaggtgaattcaaacaatagaattccccttaaag 49111373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 52295034 - 52295098
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||  |||||  |||||| || ||||||| |||| |||||||||||||||||||||||||    
T  52295034 caaacaatgaaattcgtctcaaaatatttgaattccctcgaaacattcccccatccaaacacact 52295098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 1112704 - 1112743
Alignment:
Q  196 tagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacatt 1112743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 12914144 - 12914093
Alignment:
Q  127 ctttaagagtgtgtttggatgagagaatattttaagggaattcaattatttt 178  Q
    |||| ||||||||||||||||||| ||| |||| ||||||||||| ||||||    
T  12914144 cttttagagtgtgtttggatgagaaaatgttttgagggaattcaactatttt 12914093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 1539725 - 1539679
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||  |||||||||||||||| ||||||| ||||||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 1539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 31473880 - 31473846
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||||| ||||    
T  31473880 cctcaaaacattcccccatccaaacacactctaaa 31473846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 31473933 - 31473887
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||| |||||||||||||||| ||||||| ||||| ||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacatt 31473887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 49111440 - 49111474
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||||| ||||    
T  49111440 cctcaaaacattcccccatccaaacacactctaaa 49111474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 857323 - 857360
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  857323 gaattcaactcaaagtagttgaattccctcaaaacatt 857360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 7352843 - 7352814
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  7352843 cctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 28845955 - 28845992
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  28845955 gaattcaactcaaagtagttgaattccctcaaaacatt 28845992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 36455938 - 36455909
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  36455938 cctcaaaacattcccccatccaaacacact 36455909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 49111396 - 49111433
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacatt 49111433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 1112679 - 1112643
Alignment:
Q  199 aattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||||||||| |||| |||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacatt 1112643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 10633063 - 10633035
Alignment:
Q  224 cctcaaaacattcccccatccaaacacac 252  Q
    |||||||||||||||||||||||||||||    
T  10633063 cctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 16516200 - 16516168
Alignment:
Q  226 tcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||| ||||    
T  16516200 tcaaaacattcccccatccaaacacactctaaa 16516168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 54566244 - 54566192
Alignment:
Q  201 ttcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||| |||||||| ||||||| |||||||||||||   ||||||||||||||    
T  54566244 ttcacatcaaagtaattgaattccctcaaaacattctttcatccaaacacact 54566192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 55266852 - 55266892
Alignment:
Q  191 aacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    ||||||| ||||||||| |||||||||||||| ||||||||    
T  55266852 aacaataaaattcaccttaaagtagttgaattccctcaaaa 55266892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 46429506 - 46429416
Alignment:
Q  163 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  46429506 ggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattcccccatccaaacacact 46429416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 31070523 - 31070444
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31070523 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 31070444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 331993 - 332114
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaa-caatagaattcacctcaaagtagttgaatttcctcaaa 230  Q
    |||||||||||||||| |||||| |||| ||||||||||| || |||||| || ||||||| ||||||||||||||| |||||||||||||| |||||||    
T  331993 agagtgtgtttggatg-gagaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaa 332091  T
Q  231 acattcccccatccaaacacact 253  Q
    ||||||  |||||||||||||||    
T  332092 acattcttccatccaaacacact 332114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 25655315 - 25655436
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||||||||||||||| |  ||| |||| ||||||||||| || ||||||||| ||||||| ||||||||||| || |||||||||||||| | ||||||    
T  25655315 agagtgtgtttggatggggaaatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaa 25655414  T
Q  232 cattcccccatccaaacacact 253  Q
    |||| |||||||||||||||||    
T  25655415 catttccccatccaaacacact 25655436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 28092256 - 28092353
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| |||||||||||||| |||||| || ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||  |||||||||    
T  28092256 ttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaacagttgaattccctcaaaacattcccccatttaaacacact 28092353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 27252011 - 27251916
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacaca 251  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||| || |||||||||||||| ||| ||||||||||||||||||||||||    
T  27252011 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattcccttaaaacattcccccatccaaacaca 27251916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 39215946 - 39215859
Alignment:
Q  165 aattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| ||| |||| ||| |||||||||||||||||    
T  39215946 aattcaattattttgaggtggattcaaacaataaaattcacctcaaagtaattgaattccctaaaaatatt-ccccatccaaacacact 39215859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 47284343 - 47284268
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  47284343 ttttgagggaattcaattattttgaggttgattcaaacaatagaattcacctcaaagtagctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 253
Target Start/End: Complemental strand, 25655440 - 25655317
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||||||| |  ||| |||| | ||||||||| || ||| ||||| |||| |  | | ||||||| ||||||||||||||||| ||||||    
T  25655440 taagagtgtgtttggatggggaaatgttttgacggaattcaactactttaagttgaattctattatttgaattcaactcaaagtagttgaattccctcaa 25655341  T
Q  230 aacattcccccatccaaacacact 253  Q
    |||||| |||||||||||||||||    
T  25655340 aacatttccccatccaaacacact 25655317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 44436375 - 44436296
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  44436375 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacatt 44436296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 44692939 - 44692860
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  44692939 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaacatt 44692860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 258
Target Start/End: Complemental strand, 332125 - 331990
Alignment:
Q  123 aatactttaagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaata-gaattcacctcaaagtagttgaat 221  Q
    ||||| |||||||||||||||||||  ||||| |||| ||||||||||| || ||| || || |||| |    |  ||||||||||||||||||||||||    
T  332125 aataccttaagagtgtgtttggatggaagaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaat 332026  T
Q  222 ttcctcaaaacattcccccatccaaacacactataaa 258  Q
    | |||||||||||| | ||||||||||||||| ||||    
T  332025 tccctcaaaacatt-ctccatccaaacacactctaaa 331990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 2104818 - 2104754
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||| |||||||| ||||||| |||| ||||||||||| |||||||||||||    
T  2104818 caaacaatagaattcacatcaaagtatttgaattccctcgaaacattcccctatccaaacacact 2104754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 27485522 - 27485474
Alignment:
Q  205 cctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27485522 cctcaaagtagttgaattccctcaaaacattcccccatccaaacacact 27485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 9129461 - 9129382
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||| || |||||||||||||| | ||||||||||    
T  9129461 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacatt 9129382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 9137568 - 9137489
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||| || |||||||||||||| | ||||||||||    
T  9137568 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacatt 9137489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 27251916 - 27252015
Alignment:
Q  136 tgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||| | |||| |||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||||||||||| ||||||||||||    
T  27251916 tgtgtttggatgggggaatgttttaagggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 27252015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 38506861 - 38506928
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||| |||||||||||||| || ||||||| |||||||||||||| | |||||||||||||    
T  38506861 attcaaacaatggaattcacctcaaattatttgaattccctcaaaacattcctctatccaaacacact 38506928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 54761552 - 54761616
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||| || |||||||| ||||||| |||||||||||||| |||||||||||||||    
T  54761552 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattcctccatccaaacacact 54761616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 47284188 - 47284255
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||| |||||||  |||||||| ||||||| |||||||| |||||| ||||||||||||||    
T  47284188 attcaaacaatggaattcatatcaaagtatttgaattccctcaaaatattccctcatccaaacacact 47284255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 9007443 - 9007507
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||  ||||||||| |||||| |||||||   ||||||||||||||||||||||||||||    
T  9007443 caaacaatgaaattcacctaaaagtatttgaattcgttcaaaacattcccccatccaaacacact 9007507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 5415825 - 5415904
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || ||| || ||  | ||||||||||||||||||| |||||||||||||| | ||||||||||    
T  5415825 ttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagtagttgaattccatcaaaacatt 5415904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 42130734 - 42130809
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||| ||||||||||||||| || |  |||||||||| | ||||||||||||||||||| ||||||| ||| ||||    
T  42130734 ttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaaagtaattgaattccctaaaaa 42130809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 21307520 - 21307566
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 21307566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 46672799 - 46672837
Alignment:
Q  197 agaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacatt 46672837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 9129428 - 9129465
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9129428 gaattcacctcaaagtagttgaattccctcaaaacatt 9129465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 9137535 - 9137572
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9137535 gaattcacctcaaagtagttgaattccctcaaaacatt 9137572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 37321625 - 37321588
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacatt 37321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 39215855 - 39215959
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||||||| | ||||||||| |||||||||||||| |||||| || |||  |    | |||| ||||||||| || |||||||| |||||    
T  39215855 taagagtgtgtttggatggg-gaatatttttagggaattcaattactttgaggtgaattttattgtttgaatccacctcaaaataattgaattttctcaa 39215953  T
Q  230 aacatt 235  Q
    ||||||    
T  39215954 aacatt 39215959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 44436342 - 44436379
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  44436342 gaattcacctcaaagtagttgaattccctcaaaacatt 44436379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 44692906 - 44692943
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  44692906 gaattcacctcaaagtagttgaattccctcaaaacatt 44692943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 28092357 - 28092253
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||  ||| | |||| |||| ||||||||||| | ||||||| || |||| |    | ||||||||||||||||| ||||||| ||||||    
T  28092357 taagagtgtgtttaaatgggggaatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaa 28092258  T
Q  230 aacat 234  Q
    |||||    
T  28092257 aacat 28092253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 47284257 - 47284209
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttga 180  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||    
T  47284257 agagtgtgtttggatgagggaatattttgagggaattcaaatactttga 47284209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 39110442 - 39110485
Alignment:
Q  162 gggaattcaattattttgagttggattcaaacaatagaattcac 205  Q
    |||||||||| || ||||||||| ||||||||||||||||||||    
T  39110442 gggaattcaactactttgagttgaattcaaacaatagaattcac 39110485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 19475900 - 19475854
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacatt 19475854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 46672844 - 46672878
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||||| ||||    
T  46672844 cctcaaaacattcccccatccaaacacactctaaa 46672878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 49457423 - 49457381
Alignment:
Q  193 caatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacatt 49457381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 249
Target Start/End: Complemental strand, 28092249 - 28092220
Alignment:
Q  220 atttcctcaaaacattcccccatccaaaca 249  Q
    ||||||||||||||||||||||||||||||    
T  28092249 atttcctcaaaacattcccccatccaaaca 28092220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 36398030 - 36398059
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  36398030 cctcaaaacattcccccatccaaacacact 36398059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 42005994 - 42006023
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  42005994 cctcaaaacattcccccatccaaacacact 42006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 44436289 - 44436260
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  44436289 cctcaaaacattcccccatccaaacacact 44436260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 44692853 - 44692824
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  44692853 cctcaaaacattcccccatccaaacacact 44692824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 47767463 - 47767434
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  47767463 cctcaaaacattcccccatccaaacacact 47767434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 49457374 - 49457345
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  49457374 cctcaaaacattcccccatccaaacacact 49457345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 26323440 - 26323392
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcc 237  Q
    |||||||  |||||||||| |||||| ||||||| ||||||||||||||    
T  26323440 caaacaacggaattcacctaaaagtatttgaattacctcaaaacattcc 26323392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 37321619 - 37321655
Alignment:
Q  217 tgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||| |||||||||||||||| |||||||||||||    
T  37321619 tgaattccctcaaaacattccccaatccaaacacact 37321655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 136 - 253
Target Start/End: Complemental strand, 42740068 - 42739951
Alignment:
Q  136 tgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||    
T  42740068 tgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T
Q  236 cccccatccaaacacact 253  Q
    || |||||||||||||||    
T  42739968 cctccatccaaacacact 42739951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 3853728 - 3853654
Alignment:
Q  161 agggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3853728 agggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 3853654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 3858186 - 3858112
Alignment:
Q  161 agggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3858186 agggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 3858112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 13404869 - 13404948
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  13404869 ttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 13404948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 38573420 - 38573539
Alignment:
Q  138 tgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaa-----ac 232  Q
    |||||||||| || ||| |||| ||| ||||||| || ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||     ||    
T  38573420 tgtttggatggga-aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactac 38573518  T
Q  233 attcccccatccaaacacact 253  Q
    |||||||||||||||||||||    
T  38573519 attcccccatccaaacacact 38573539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 17110911 - 17110990
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  17110911 ttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 17110990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 34008865 - 34008801
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattcccccatccaaacacact 34008801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 29611454 - 29611390
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||  |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  29611454 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattcccccatccaaacacact 29611390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 30444932 - 30444996
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattcctccatccaaacacact 30444996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 26520438 - 26520501
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacac 252  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattccctcatccaaacacac 26520501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 42711397 - 42711306
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| ||||||||||| || ||||||||| ||||||      | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  42711397 ttttgagggaattcaactactttgagttgaattcaa------gtattcaactcaaagtagttgaatttcctcaaaacatttccccatccaaacacact 42711306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 14799977 - 14800081
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    |||||||||||||||||| | |||| |||| |||||||| || ||||| ||| ||  ||||||||||| |||||||||  ||||||||||||| ||||||    
T  14799977 taagagtgtgtttggatgggggaatgttttgagggaattaaactattt-gaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaa 14800075  T
Q  230 aacatt 235  Q
    ||||||    
T  14800076 aacatt 14800081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 30435307 - 30435383
Alignment:
Q  176 tttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||| ||| ||||||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||||||    
T  30435307 tttgagttgaatttaaacaatagaatttaccttaaa-tagttgaattccctcaaaacatttccccatccaaacacact 30435383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 4156228 - 4156288
Alignment:
Q  175 ttttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||    
T  4156228 ttttgagttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacatt 4156288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 4221799 - 4221699
Alignment:
Q  23 tgatgtgttctttttcttgccacatcaaatgcttacttggat----gtacacctaggcaaaggac-aaaaatgctcacaattatcttatatgtttcatct 117  Q
    |||||||| |||||| ||||||||||||||||||||||||||    | |||| ||||||| |||| ||||||| ||| ||||||||||||| ||||||||    
T  4221799 tgatgtgtcctttttgttgccacatcaaatgcttacttggatgcacgcacacataggcaagggacaaaaaatgatcataattatcttatatctttcatct 4221700  T
Q  118 t 118  Q
    |    
T  4221699 t 4221699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 7202921 - 7202867
Alignment:
Q  199 aattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacattcatccatccaaacacact 7202867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 42739946 - 42740074
Alignment:
Q  129 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctca 228  Q
    |||||||||||||||||||   |||| |||| ||||||||||| || |||||| || |||  |    |||||| ||||||||| || ||||||| |||||    
T  42739946 ttaagagtgtgtttggatggaggaatgttttgagggaattcaactactttgagatgaattttattgttagaatccacctcaaaataattgaattccctca 42740045  T
Q  229 aaacattcccccatccaaacacactataa 257  Q
    ||| ||| ||||||||||||||| |||||    
T  42740046 aaatatttccccatccaaacacattataa 42740074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 7202923 - 7202967
Alignment:
Q  209 aaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||| |||||||||||||| |||||||||||||||    
T  7202923 aaagtagttgaattccctcaaaacattcctccatccaaacacact 7202967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 24510273 - 24510345
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataaa 258  Q
    ||||||||||| || ||||||||||| || || |||  ||||||||||||| | |||||||||||||||||||    
T  24510273 attcaaacaatggagttcacctcaaaatacttaaatcccctcaaaacattctctcatccaaacacactataaa 24510345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 36625293 - 36625245
Alignment:
Q  129 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattt 177  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  36625293 ttaagagtgtgtttggatgaaggaatattttgagggaattcaattattt 36625245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 14800031 - 14799981
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  14800031 tcacctcaaa-tagtttaattccctcaaaacattcccccatccaaacacact 14799981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 38573470 - 38573412
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataa 257  Q
    ||||||| || |||||||||||||||||||||||||||  |||||||||||| |||||||    
T  38573470 gaattcaactaaaagtagttgaatttcctcaaaacatt-tcccatccaaacatactataa 38573412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 8469581 - 8469517
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| |||||||||| | || | ||||||| ||||||||||||||| | ||||||||||||    
T  8469581 caaacaatggaattcacctaataggacttgaattccctcaaaacattccctcgtccaaacacact 8469517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 34388591 - 34388528
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| |||||||||||||| || |||||    |||||||||||||||||||||||||||||    
T  34388591 caaacaatggaattcacctcaaa-tatttgaaccctctcaaaacattcccccatccaaacacact 34388528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 11744805 - 11744767
Alignment:
Q  129 ttaagagtgtgtttggatgagagaatattttaagggaat 167  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  11744805 ttaagagtgtgtttggatgagagaatatttagagggaat 11744767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 13144667 - 13144621
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacatt 13144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 15186816 - 15186862
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||| ||| || |||||||| |||||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacatt 15186862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 23011818 - 23011772
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacatt 23011772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 29482859 - 29482889
Alignment:
Q  224 cctcaaaacattcccccatccaaacacacta 254  Q
    |||||||||||||||||||||||||||||||    
T  29482859 cctcaaaacattcccccatccaaacacacta 29482889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 33902748 - 33902705
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||    
T  33902748 aaacaatagaattcacc--aaagtagttgaattccctcaaaacatt 33902705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 35404741 - 35404783
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||||| || |||||||||||||||| ||||||||||||||||    
T  35404741 caaacagtaaaattcacctcaaagtatttgaatttcctcaaaa 35404783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 44889438 - 44889392
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||||    
T  44889438 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 44889392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14991723 - 14991694
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  14991723 cctcaaaacattcccccatccaaacacact 14991694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 17110944 - 17110907
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  17110944 gaattcaactcaaagtagttgaattccctcaaaacatt 17110907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 29257403 - 29257432
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  29257403 cctcaaaacattcccccatccaaacacact 29257432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 32626066 - 32626029
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  32626066 gaattcaccttaaagtagttgaattccctcaaaacatt 32626029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 33377349 - 33377378
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  33377349 cctcaaaacattcccccatccaaacacact 33377378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 42711364 - 42711401
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacatt 42711401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 40854080 - 40853989
Alignment:
Q  162 gggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  40854080 gggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattcccccatccaaacacact 40853989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 46069503 - 46069406
Alignment:
Q  161 agggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa-----cattcccccatccaaacacact 253  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||     ||||||||||||||||||||||    
T  46069503 agggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcccccatccaaacacact 46069406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 29065936 - 29065857
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29065936 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 29065857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 5644794 - 5644715
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5644794 ttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 5644715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 21635927 - 21636006
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| | ||||||||||    
T  21635927 ttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttaaattccttcaaaacatt 21636006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 49052835 - 49052906
Alignment:
Q  164 gaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  49052835 gaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 49052906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 30080776 - 30080840
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| |||||||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  30080776 caaacaatggaattcacctgaaagtatttaaatttcctcaaaacattcccccatccaaacacact 30080840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 19865530 - 19865593
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  19865530 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaacattccctcatccaaacacact 19865593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 30587878 - 30587942
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| |||||||| | |||||| ||||||| ||||||||||||||||||||||||||||||    
T  30587878 caaacaatggaattcacattaaagtatttgaattccctcaaaacattcccccatccaaacacact 30587942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 31913305 - 31913238
Alignment:
Q  186 attcaaacaatagaatt-cacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  31913305 attcaaacaatagaatttcaccttaaa-tagttgaattccctcaaaacattcccccatccaaacacact 31913238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 32650657 - 32650593
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacattcctccatcgaaacacact 32650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 40110855 - 40110775
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaa-caatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || ||||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  40110855 ttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 40110775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 44915244 - 44915316
Alignment:
Q  163 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||| || |||||| || |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  44915244 ggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacatt 44915316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 13814969 - 13815033
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| ||| |||||||| |||||||| ||||||| |||||||||||||||| |||||||||||||    
T  13814969 caaataatggaattcacatcaaagtatttgaattccctcaaaacattcccctatccaaacacact 13815033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 14790197 - 14790134
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| |||| |||||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  14790197 caaataataaaattcacctcaaagtatttgaattccctcaaaacatt-ccccatccaaacacact 14790134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 2057437 - 2057516
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| ||  ||||||||||| |||||||||  ||||||||||||| ||||||||||||    
T  2057437 ttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacatt 2057516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 34388386 - 34388303
Alignment:
Q  152 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||| || |||||| ||  |||||||||| |||||||||| ||||||||||||||  |||| ||||||    
T  34388386 aatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtagttgaattctctcagaacatt 34388303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 46482043 - 46481984
Alignment:
Q  176 tttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||| ||||||||||||||||||| ||  || ||||| |||||||||||||||||    
T  46482043 tttgagttgaattcaaacaatagaattcatcttcaaatagttaaatttcctcaaaacatt 46481984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 43955642 - 43955676
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||||||||||    
T  43955642 cctcaaaacattcccccatccaaacacactataaa 43955676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 31632809 - 31632760
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  31632809 attcaaacaatggaattcacctcaaagtatttgaattccctcataacatt 31632760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 40110822 - 40110859
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  40110822 gaattcacctcaaagtagttgaattccctcaaaacatt 40110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 40495314 - 40495252
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||| |||||||| ||||||| ||||   ||||| |||||||||||||||||    
T  40495314 caaacaatagaattcacatcaaagtatttgaattccctc--gacatttccccatccaaacacact 40495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 23548586 - 23548630
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaaca 233  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||    
T  23548586 caaacaatggaattcaccccaaagtatttgaatttcctcaaaaca 23548630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 45984424 - 45984360
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| ||| ||||||||    ||||||||||||||    
T  45984424 caaacaattgaattcacctcaaagtatttgaattcccttaaaacattttttcatccaaacacact 45984360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 45988784 - 45988720
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| ||| ||||||||    ||||||||||||||    
T  45988784 caaacaattgaattcacctcaaagtatttgaattcccttaaaacattttttcatccaaacacact 45988720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 31913300 - 31913343
Alignment:
Q  216 ttgaattt-cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  31913300 ttgaatttacctcaaaacattcccccatccaaacacactctaaa 31913343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 3905634 - 3905680
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||||||||||| ||||||| | | ||||||||    
T  3905634 caaacaatagaattcacctcaaagtatttgaattccttgaaaacatt 3905680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 26162112 - 26162158
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacatt 26162158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 29639190 - 29639236
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacatt 29639236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 35455835 - 35455801
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||||| ||||    
T  35455835 cctcaaaacattcccccatccaaacacactctaaa 35455801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 43791174 - 43791128
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| || |||||||||||||| ||||||| ||||||||||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacatt 43791128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 45984359 - 45984417
Alignment:
Q  133 gagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaa 191  Q
    |||||||||||||||| | ||| |||||||||||||||| || |||||| || ||||||    
T  45984359 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaa 45984417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 45988719 - 45988777
Alignment:
Q  133 gagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaa 191  Q
    |||||||||||||||| | ||| |||||||||||||||| || |||||| || ||||||    
T  45988719 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaa 45988777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 2057466 - 2057433
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||| ||||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacatt 2057433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 14603290 - 14603319
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  14603290 cctcaaaacattcccccatccaaacacact 14603319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 26162165 - 26162194
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  26162165 cctcaaaacattcccccatccaaacacact 26162194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 28539196 - 28539225
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  28539196 cctcaaaacattcccccatccaaacacact 28539225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 31632753 - 31632724
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  31632753 cctcaaaacattcccccatccaaacacact 31632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 34398977 - 34399006
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  34398977 cctcaaaacattcccccatccaaacacact 34399006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 39342670 - 39342699
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  39342670 cctcaaaacattcccccatccaaacacact 39342699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 40110768 - 40110739
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  40110768 cctcaaaacattcccccatccaaacacact 40110739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 43955548 - 43955519
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  43955548 cctcaaaacattcccccatccaaacacact 43955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 43955596 - 43955555
Alignment:
Q  194 aatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  43955596 aatagaattcatcttaaagtagttgaattccctcaaaacatt 43955555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 44915270 - 44915233
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  44915270 gaattcacctcaaagtagttgaattccttcaaaacatt 44915233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 253
Target Start/End: Complemental strand, 2057425 - 2057397
Alignment:
Q  225 ctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||||||||||||||||||    
T  2057425 ctcaaaacattcccccatccaaacacact 2057397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 31913233 - 31913281
Alignment:
Q  129 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattt 177  Q
    ||||||||||||||||||| | |||| |||| ||||||||||| |||||    
T  31913233 ttaagagtgtgtttggatgggggaatgttttgagggaattcaactattt 31913281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 36328794 - 36328838
Alignment:
Q  210 aagtagttgaatttcctcaaaacattcccccatccaaacacacta 254  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||    
T  36328794 aagtatttgaattctctcaaaacattaccccatccaaacacacta 36328838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 40667425 - 40667361
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||  |||||| | ||||||| || |||| ||||||||||||  ||||||||||||||||    
T  40667425 caaacaatgaaattcatcccaaagtatttaaattccctcaaaacattttcccatccaaacacact 40667361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 44915193 - 44915229
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaa 166  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  44915193 taagagtgtgtttggatgagagaattttttgagggaa 44915229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 27033612 - 27033528
Alignment:
Q  151 gaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27033612 gaatattttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 27033528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 253
Target Start/End: Original strand, 11824704 - 11824819
Alignment:
Q  138 tgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcc 237  Q
    ||||||||||   |||| |||| ||||||||||| || |||||| || |||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  11824704 tgtttggatggaggaatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacattcc 11824803  T
Q  238 cccatccaaacacact 253  Q
    ||||||||||||||||    
T  11824804 cccatccaaacacact 11824819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 14537241 - 14537338
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| ||| ||||||| || |||||| || |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  14537241 ttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattcccccatccaaacacact 14537338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 253
Target Start/End: Complemental strand, 3345887 - 3345765
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaat-tattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaa 230  Q
    |||| ||||||||||| |  ||| |||| |||||||||||  || |||||| || ||||||||||||||||| |||| |||||||||||||| |||||||    
T  3345887 agagcgtgtttggatggggaaatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaa 3345788  T
Q  231 acattcccccatccaaacacact 253  Q
    |||||||||||||||||||||||    
T  3345787 acattcccccatccaaacacact 3345765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 41461557 - 41461636
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  41461557 ttttgagggaatttaattattttgaggtggattcaaacaatagaattcacctcaaaatagttgaattccctcaaaacatt 41461636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 10244320 - 10244215
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    ||||||||| |||| ||| | |||| |||||||||||||||| || |||||| ||  ||||||||||| |||||||||  ||||||||||||| ||||||    
T  10244320 taagagtgtatttgaatgggggaatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaa 10244221  T
Q  230 aacatt 235  Q
    ||||||    
T  10244220 aacatt 10244215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 11607304 - 11607239
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactat 255  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattaccccatccaaacacactat 11607239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 784842 - 784914
Alignment:
Q  163 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||| || || ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  784842 ggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 784914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 8736430 - 8736494
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattccctcatccaaacacact 8736494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 11684674 - 11684729
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacattcctccatccaaacacact 11684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 11595402 - 11595337
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactat 255  Q
    ||||||| |||||||||||||| || ||||||| |||||||||||| |||||||||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattaccccatccaaacacactat 11595337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 21504537 - 21504470
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||| ||||||| |||||| || ||||||| |||||||||||||||| |||||||||||||    
T  21504537 attcaaacaatggaattcatctcaaaatatttgaattccctcaaaacattccccgatccaaacacact 21504470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 11684734 - 11684656
Alignment:
Q  129 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacct 207  Q
    |||||||||||||||||||   |||| |||| ||||||||||| || |||||| || ||||||||||||||||||||||    
T  11684734 ttaagagtgtgtttggatggaggaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct 11684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 20935790 - 20935722
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||| |||||||| |||||||| ||||||| |||||||||||| ||||||||||||||||| ||||    
T  20935790 caaacaatggaattcacatcaaagtatttgaattccctcaaaacatt-ccccatccaaacacactctaaa 20935722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 40026151 - 40026102
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  40026151 attcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacatt 40026102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 11824755 - 11824704
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaaca 249  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  11824755 gaattcatctcaaagtagttgaattccctcaaaacattcctccatccaaaca 11824704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 14537340 - 14537237
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||||||||||||||| | |||| |||| ||||||||||| || ||| || || |||| |    | ||||||||||||||||||||||||| ||||||||    
T  14537340 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaa 14537241  T
Q  232 catt 235  Q
    ||||    
T  14537240 catt 14537237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 3345829 - 3345882
Alignment:
Q  198 gaattcacctcaaagta-gttgaatttcctcaaaacattcccccatccaaacac 250  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  3345829 gaattcacctcaaagtacgttgaattccctcaaaacatttccccatccaaacac 3345882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 14365742 - 14365820
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaa-caatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || ||||||| ||||||||||||||  |||||||||||||| ||||||||||||    
T  14365742 ttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcacc--aaagtagttgaattccctcaaaacatt 14365820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 14954343 - 14954388
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 14954388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 41585679 - 41585743
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||| | ||||| |||||||| ||||||| |||||||||||| | |||||||||||||||    
T  41585679 caaacaataaatttcacttcaaagtatttgaattccctcaaaacatttcaccatccaaacacact 41585743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 44205647 - 44205711
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| ||||||||| || | |||||| ||||||| |||||||||||| |||||||||||||||||    
T  44205647 caaataatagaatttacataaaagtatttgaattccctcaaaacatttccccatccaaacacact 44205711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 10244265 - 10244316
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||| |||||    
T  10244265 tcacctcaaagtagttgaattcccttaaaacattcccccattcaaatacact 10244316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 11532242 - 11532288
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 11532288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 11716483 - 11716446
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacatt 11716446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 14365775 - 14365738
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  14365775 gaattcacctcaaagtagttgaattccctcaaaacatt 14365738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 35047717 - 35047750
Alignment:
Q  220 atttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||||||    
T  35047717 atttcctcaaaacattcccccatccaaacacact 35047750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 32840181 - 32840241
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaaca 249  Q
    ||||||||  |||||||||||||||| || |||| |||||||||||| || ||||||||||    
T  32840181 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatttcctcatccaaaca 32840241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 11716450 - 11716501
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacct 207  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||||||    
T  11716450 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct 11716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 19231301 - 19231336
Alignment:
Q  216 ttgaatttcctcaaaacattcccccatccaaacaca 251  Q
    ||||||| ||||||||||||||||||||||||||||    
T  19231301 ttgaattccctcaaaacattcccccatccaaacaca 19231336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 11793979 - 11793933
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacatt 11793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 32839637 - 32839683
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacatt 32839683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 769067 - 769038
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  769067 cctcaaaacattcccccatccaaacacact 769038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 1583851 - 1583880
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  1583851 cctcaaaacattcccccatccaaacacact 1583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 8736496 - 8736447
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttgag 181  Q
    |||||||||||||||||| |||| |||| ||||||||||| || ||||||    
T  8736496 agagtgtgtttggatgagggaatgttttgagggaattcaaatactttgag 8736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 10480150 - 10480121
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  10480150 cctcaaaacattcccccatccaaacacact 10480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 11141336 - 11141307
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  11141336 cctcaaaacattcccccatccaaacacact 11141307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14365731 - 14365702
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  14365731 cctcaaaacattcccccatccaaacacact 14365702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 14537230 - 14537201
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  14537230 cctcaaaacattcccccatccaaacacact 14537201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 33189299 - 33189328
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  33189299 cctcaaaacattcccccatccaaacacact 33189328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 41461643 - 41461672
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  41461643 cctcaaaacattcccccatccaaacacact 41461672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 3092366 - 3092322
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaaca 233  Q
    |||||||| ||||| ||| ||||||| ||||||||||||||||||    
T  3092366 caaacaatggaatttaccccaaagtatttgaatttcctcaaaaca 3092322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 6749175 - 6749223
Alignment:
Q  132 agagtgtgtttggatgagagaatattttaagggaattcaattattttga 180  Q
    ||||||||||||||||||  ||||||||  ||||||||||||| |||||    
T  6749175 agagtgtgtttggatgaggaaatattttgtgggaattcaattactttga 6749223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 11793926 - 11793894
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactata 256  Q
    |||||||| ||||||||||||||||||||||||    
T  11793926 cctcaaaatattcccccatccaaacacactata 11793894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 44255718 - 44255674
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaaca 233  Q
    |||||||||||||||||| ||||||| |||||||  |||||||||    
T  44255718 caaacaatagaattcaccccaaagtatttgaattctctcaaaaca 44255674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 9285790 - 9285685
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 229  Q
    ||||||||||||| |||||| |||| |||| ||||||||||| || |||||| || ||||||||||||||||||| ||||||||||||||||| ||||||    
T  9285790 taagagtgtgtttagatgagggaatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaa 9285691  T
Q  230 aacatt 235  Q
    ||||||    
T  9285690 aacatt 9285685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 9763129 - 9763050
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9763129 ttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 9763050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 776122 - 776201
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||| ||||||| || ||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  776122 ttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagtagttgaatttcctcaaaacatt 776201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 1195416 - 1195353
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacattcccccatccaaacacact 1195353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 8475245 - 8475181
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| |||||||||  |||||| ||||||| |||||||||||| |||||||||||||||||    
T  8475245 caaacaatggaattcacccaaaagtatttgaattccctcaaaacatttccccatccaaacacact 8475181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 6919750 - 6919828
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| ||| | |||||||| ||||||||||||    
T  6919750 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacatt 6919828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 9285731 - 9285786
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||| ||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  9285731 gaattcatctcaaagtagttgaattccctcaaaacattccctcatctaaacacact 9285786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 6919783 - 6919746
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  6919783 gaattcacctcaaagtagttgaattccctcaaaacatt 6919746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 28918249 - 28918203
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacatt 28918203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 33733463 - 33733429
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||||| ||||    
T  33733463 cctcaaaacattcccccatccaaacacactctaaa 33733429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 6919835 - 6919864
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  6919835 cctcaaaacattcccccatccaaacacact 6919864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 15299510 - 15299546
Alignment:
Q  199 aattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||||||||| | ||||||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacatt 15299546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 22305178 - 22305114
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacattcccccatccaaacacact 22305114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 28828464 - 28828369
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||  | ||  ||| ||||||||||||||||||||||||||||||    
T  28828464 ttttgagggaattcaattattttgaggtggattcaaacaatagaattc-cctcaaaaca-ttacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 33146257 - 33146193
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattcccccatccaaacacact 33146193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 15270837 - 15270904
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacattcctccatccaaacacact 15270904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 20523171 - 20523254
Alignment:
Q  152 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||| | ||||||||||| || |||||| || |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  20523171 aatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 20523254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 2550384 - 2550330
Alignment:
Q  199 aattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacattcccccatccaaacacact 2550330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 9764455 - 9764376
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  9764455 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 9764376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 15374002 - 15374081
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  15374002 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacatt 15374081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 40643838 - 40643938
Alignment:
Q  134 agtgtgtttggatgagagaa-tattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaac 232  Q
    |||||||||||||| ||||| | |||| ||||||||||| || ||||||||  |||||||||||||||||||||| ||| |||||||||| |||||||||    
T  40643838 agtgtgtttggatg-gagaaatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaac 40643935  T
Q  233 att 235  Q
    |||    
T  40643936 att 40643938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 17542344 - 17542405
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaa 247  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacattctcccatccaaa 17542405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 6634057 - 6634120
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaa 220  Q
    |||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  6634057 ttttgagggaattcaattatttcgagt-gaattcaaacaatagaattcacctcaaagtagttgaa 6634120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 28490076 - 28490013
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaaca-tcccccatccaaacacact 28490013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 40809383 - 40809462
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || ||||||||| |||||||||||| ||||||||| ||||||| ||||||  |||||||||||    
T  40809383 ttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtagctgaattcactcaaaacatt 40809462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 28489546 - 28489485
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacaca 251  Q
    ||||||| ||||||||||||||||| |||||||  ||||||| |||||||||||||||||||    
T  28489546 aaacaatggaattcacctcaaagtatttgaattctctcaaaatattcccccatccaaacaca 28489485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 34105155 - 34105086
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataaa 258  Q
    ||||||||  |||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||    
T  34105155 caaacaatgaaattcatctcaaagtatttgaattttctcaaaacattcctccatccaaacacactctaaa 34105086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 12064454 - 12064518
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||  |||||||||||||||| || |||| |||||||||||||||||||| |||||||||    
T  12064454 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattcccccatcaaaacacact 12064518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 32390089 - 32390014
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaa 231  Q
    |||| ||||||||||| || |||||| || ||||||| |||||||||||||| | |||||||||||| ||||||||    
T  32390089 ttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtagttgaattccctcaaaa 32390014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 32470999 - 32470920
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || ||||||||| ||||||| ||||||||| |||| ||| |||||||||| | ||||||||||    
T  32470999 ttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacatt 32470920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 40643885 - 40643834
Alignment:
Q  206 ctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataa 257  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  40643885 ctcaaagtagttgaattccctcaaaacatttctccatccaaacacactataa 40643834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3563364 - 3563315
Alignment:
Q  186 attcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  3563364 attcaagcaatagaattcaccttaaagtagttgaattccctcaaaacatt 3563315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 34982293 - 34982346
Alignment:
Q  200 attcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||||| ||||| |||||||| |||||||||||||| |||||||||||||||    
T  34982293 attcaccttaaagtggttgaattccctcaaaacattcctccatccaaacacact 34982346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 2316488 - 2316420
Alignment:
Q  164 gaattcaattattttgagttggattcaaacaatagaattcacc-tcaaagtagttgaatttcctcaaaa 231  Q
    |||||||| || |||||| || ||||||||||||||||||||| | |||||||||||||| ||||||||    
T  2316488 gaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaa 2316420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 22767036 - 22766990
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacatt 22766990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 25935276 - 25935322
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacatt 25935322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 37722880 - 37722926
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 37722926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 15374035 - 15373998
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  15374035 gaattcacctcaaagtagttgaattccctcaaaacatt 15373998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 32390056 - 32390093
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  32390056 gaattcacctcaaagtagttgaattccctcaaaacatt 32390093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 33146100 - 33146063
Alignment:
Q  216 ttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  33146100 ttgaattccctcaaaacattcccccatccaaacacact 33146063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 253
Target Start/End: Original strand, 40090449 - 40090482
Alignment:
Q  220 atttcctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||||||    
T  40090449 atttcctcaaaacattcccccatccaaacacact 40090482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 16515099 - 16515139
Alignment:
Q  195 atagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacatt 16515139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 2721557 - 2721592
Alignment:
Q  200 attcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||| ||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacatt 2721592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 255
Target Start/End: Original strand, 2721599 - 2721630
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactat 255  Q
    ||||||||||||||||||||||||||||||||    
T  2721599 cctcaaaacattcccccatccaaacacactat 2721630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 22302584 - 22302541
Alignment:
Q  210 aagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||    
T  22302584 aagtatttgaattccctcaaaacattaccccatccaaacacact 22302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 26281262 - 26281301
Alignment:
Q  196 tagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacatt 26281301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 12479990 - 12479948
Alignment:
Q  190 aaacaatagaattcacctcaaagtagttgaatttcctcaaaac 232  Q
    |||||||  |||||||||||||||| |||||||||||||||||    
T  12479990 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaac 12479948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 13243532 - 13243566
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||| ||||||||||||||||||||||||||    
T  13243532 cctcaaaatattcccccatccaaacacactataaa 13243566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 22766983 - 22766949
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||||||||||||||||||||||||| ||||    
T  22766983 cctcaaaacattcccccatccaaacacactctaaa 22766949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 37241096 - 37241157
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacaca 251  Q
    |||||||| ||||||||||||||||| || |||| ||| |||||||| || ||||||||||||    
T  37241096 caaacaatggaattcacctcaaagtatttcaattccctgaaaacatt-ccacatccaaacaca 37241157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 40090400 - 40090446
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||||||||||| ||||||| | ||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacatt 40090446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 2316409 - 2316380
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  2316409 cctcaaaacattcccccatccaaacacact 2316380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 2316463 - 2316500
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||||||||||  |||||||||||    
T  2316463 gaattcacctcaaagtagttgaattctctcaaaacatt 2316500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 9764426 - 9764459
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||| ||||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacatt 9764459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 15374088 - 15374117
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  15374088 cctcaaaacattcccccatccaaacacact 15374117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 15804353 - 15804324
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  15804353 cctcaaaacattcccccatccaaacacact 15804324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 16515179 - 16515142
Alignment:
Q  130 taagagtgtgtttggatgagagaatattttaagggaat 167  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  16515179 taagagtgtgtttggatgagagaatgtttttagggaat 16515142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 17492634 - 17492679
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacat 234  Q
    |||||||| |||||||||||||| || ||||||| |||||||||||    
T  17492634 caaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 22303909 - 22303938
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  22303909 cctcaaaacattcccccatccaaacacact 22303938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 25935329 - 25935358
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  25935329 cctcaaaacattcccccatccaaacacact 25935358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 32470966 - 32471003
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  32470966 gaattcaactcaaagtagttgaattccctcaaaacatt 32471003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 40643945 - 40643974
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  40643945 cctcaaaacattcccccatccaaacacact 40643974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 40809416 - 40809379
Alignment:
Q  198 gaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  40809416 gaattcaactcaaagtagttgaattccctcaaaacatt 40809379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 41762254 - 41762283
Alignment:
Q  224 cctcaaaacattcccccatccaaacacact 253  Q
    ||||||||||||||||||||||||||||||    
T  41762254 cctcaaaacattcccccatccaaacacact 41762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 16515081 - 16515045
Alignment:
Q  196 tagaattcacctcaaagtagttgaatttcctcaaaac 232  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaac 16515045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 19533946 - 19533978
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactata 256  Q
    |||||||||||||| ||||||||||||||||||    
T  19533946 cctcaaaacattcctccatccaaacacactata 19533978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 20523262 - 20523290
Alignment:
Q  225 ctcaaaacattcccccatccaaacacact 253  Q
    |||||||||||||||||||||||||||||    
T  20523262 ctcaaaacattcccccatccaaacacact 20523290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 32390140 - 32390096
Alignment:
Q  123 aatactttaagagtgtgtttggatgagagaatattttaagggaat 167  Q
    |||||| ||||||||||||||||| ||||||| |||| |||||||    
T  32390140 aatactctaagagtgtgtttggattagagaattttttgagggaat 32390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 17561 - 17638
Alignment:
Q  176 tttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacact 253  Q
    |||||| ||||  ||||||||| ||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  17561 tttgaggtggaaccaaacaataaaatgcacctcaaaggagttgaattccctcaaaacattcccccatccaaacacact 17638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 56282 - 56395
Alignment:
Q  127 ctttaagagtgtgtttggatgagagaatat-----tttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaat 221  Q
    ||||||||||||||||||||| | |||| |     ||| ||||||||||| || |||||| ||  ||||||||||||||||||||| |||||||||||||    
T  56282 ctttaagagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaat 56381  T
Q  222 ttcctcaaaacatt 235  Q
    | ||||||||||||    
T  56382 tccctcaaaacatt 56395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 56345 - 56289
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaa-----cattcccccatccaaacacact 253  Q
    ||||||||||||||||||||| ||||||||     ||||||||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattcccccatccaaacacact 56289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 109115 - 109046
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattcccccatccaaacacactataaa 258  Q
    |||||||| |||||||| |||||||| || |||| |||||||||||||||||||||||||||||| ||||    
T  109115 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattcccccatccaaacacactctaaa 109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 522 - 443
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||   ||||||||||||| ||||||||||||    
T  522 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacatt 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 533 - 566
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataa 257  Q
    ||||||||||||||||||||||||||||||||||    
T  533 cctcaaaacattcccccatccaaacacactataa 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 493 - 526
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||| ||||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacatt 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 2071 - 2150
Alignment:
Q  156 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||   ||||||||||||| ||||||||||||    
T  2071 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacatt 2150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 2060 - 2027
Alignment:
Q  224 cctcaaaacattcccccatccaaacacactataa 257  Q
    ||||||||||||||||||||||||||||||||||    
T  2060 cctcaaaacattcccccatccaaacacactataa 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 2100 - 2067
Alignment:
Q  202 tcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||| ||||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacatt 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 4159 - 4113
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacatt 4113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 42076 - 42035
Alignment:
Q  194 aatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacatt 42035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 83025 - 82981
Alignment:
Q  191 aacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacatt 82981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 16363 - 16429
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcct--caaaacattcccccatccaaacacact 253  Q
    |||||||| ||||| |||||||| || |||||||||||   |||||||||||||||| |||||||||    
T  16363 caaacaatggaatttacctcaaaatatttgaatttccttaaaaaacattcccccatctaaacacact 16429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 4487 - 4533
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||| |||| || ||||||||||||||||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacatt 4533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 5131 - 5177
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| ||||||||| |||| || ||||||||||||||||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacatt 5177  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 10970 - 10924
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacatt 235  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacatt 10924  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 9575 - 9640
Alignment:
Q  189 caaacaatagaattcacctcaaagtagttgaatttcctc-aaaacattcccccatccaaacacact 253  Q
    |||||||| ||||| ||||||||||| |||||||  ||| |||||||||| ||||| |||||||||    
T  9575 caaacaatggaatttacctcaaagtatttgaattctctcaaaaacattcctccatctaaacacact 9640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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