View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8912A_high_5 (Length: 402)
Name: NF8912A_high_5
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8912A_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 6634346 - 6634631
Alignment:
| Q |
20 |
atcaatgttactaataaaagaaacataaa-ctaagaaccacctccattgagccaaagaacaagtggtttggaaacagcatcattcttagcctcaacaaag |
118 |
Q |
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| T |
6634346 |
atcaatgttactaataaaagaaacaaaaaactaagaaccacctccattgagccaaagaacaagtggtttggaaacagcatcattcttagcctcaacaaag |
6634445 |
T |
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| Q |
119 |
tagaaaaagagtgcttttttgttttgatcatcaacatttacataacctgaaaagtgatgaaaatcaacatgtggttgaccaggtaaatttgtgatcttat |
218 |
Q |
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| T |
6634446 |
tagaaaaagagtgcttttttgttttgatcatcaacatttacataacctgaaaactgatgaaaatcaacatgtggttgaccaggtaaatttgtgatcttat |
6634545 |
T |
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| Q |
219 |
tagggtgtgaaactgcaaaggaacattggtgaagcataattgcagcaacacacattgcaatagaacaacaaagtagaaaagacatg |
304 |
Q |
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| T |
6634546 |
tagggtgtgaaactgcaaaggaacattggtgaagtataattgcagcaacacacattgcaatagaacaacaaagtagaaaagacatg |
6634631 |
T |
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