View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8912A_low_100 (Length: 329)
Name: NF8912A_low_100
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8912A_low_100 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 5 - 272
Target Start/End: Complemental strand, 33067355 - 33067088
Alignment:
| Q |
5 |
ccaagaatattgaaaggtgtagtaggaatgagaatgttgttgttggtataaaaattgatgaaatggatcctcctttacctgtgatcaagagggtgaataa |
104 |
Q |
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| T |
33067355 |
ccaaaaatattgaaaggtgtattaggaatgagaatgttgttgttggtataaaaattgatgaaatggatcctcctttacctgtgatcaagagggtgaataa |
33067256 |
T |
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| Q |
105 |
gttggaagaaggaaacaaaagtgagaatagtctttggaaaagaagatcaggttcaagtttggctccattgagaagtttacaggttcaacagattcaagtt |
204 |
Q |
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| T |
33067255 |
gttggaagaaggaaacaaaagtgagaatagtctttggaaaagaagatcaggttcaagtttggctccattgagaagtttacaggttcaacagattcaagtt |
33067156 |
T |
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| Q |
205 |
caaactccaaagctttgtattgaacctacaactgtttgataatggaattagattagacagatccatag |
272 |
Q |
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| T |
33067155 |
caaactccaaagctttgtattgaacctacaactgtttgataatggaattagattagacagatccatag |
33067088 |
T |
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