View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_111 (Length: 314)

Name: NF8912A_low_111
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_111
NF8912A_low_111
[»] chr7 (82 HSPs)
chr7 (1-310)||(46386686-46387006)
chr7 (6-313)||(12465864-12466182)
chr7 (4-313)||(20585486-20585806)
chr7 (4-313)||(44374076-44374396)
chr7 (4-313)||(44382941-44383261)
chr7 (4-313)||(19282222-19282542)
chr7 (4-208)||(11066714-11066918)
chr7 (4-208)||(13148074-13148278)
chr7 (4-208)||(12127766-12127970)
chr7 (6-208)||(12371524-12371723)
chr7 (4-204)||(32434191-32434392)
chr7 (113-289)||(37785076-37785263)
chr7 (5-172)||(14928935-14929100)
chr7 (5-172)||(15352401-15352566)
chr7 (123-289)||(43277546-43277723)
chr7 (123-265)||(3287100-3287247)
chr7 (123-265)||(18875646-18875799)
chr7 (4-100)||(15720130-15720226)
chr7 (4-99)||(33001269-33001364)
chr7 (11-105)||(14258701-14258795)
chr7 (103-203)||(11053876-11053976)
chr7 (14-105)||(16580009-16580100)
chr7 (14-105)||(16585563-16585654)
chr7 (11-105)||(32301531-32301625)
chr7 (16-105)||(16460546-16460635)
chr7 (103-207)||(15281505-15281607)
chr7 (38-105)||(1489907-1489974)
chr7 (14-105)||(20487792-20487883)
chr7 (132-216)||(8757130-8757215)
chr7 (96-207)||(15096385-15096495)
chr7 (11-71)||(18875455-18875515)
chr7 (4-71)||(13745802-13745869)
chr7 (105-207)||(33001203-33001303)
chr7 (96-207)||(19558025-19558135)
chr7 (4-71)||(25941821-25941888)
chr7 (123-207)||(3289548-3289632)
chr7 (140-216)||(40555485-40555562)
chr7 (11-71)||(3287380-3287440)
chr7 (4-64)||(13894485-13894545)
chr7 (96-186)||(13133257-13133346)
chr7 (12-71)||(13745386-13745445)
chr7 (4-71)||(14161456-14161523)
chr7 (96-186)||(14219713-14219802)
chr7 (133-207)||(21735237-21735312)
chr7 (4-67)||(24270583-24270646)
chr7 (102-207)||(15139364-15139468)
chr7 (140-216)||(4325289-4325366)
chr7 (140-216)||(13408005-13408082)
chr7 (11-71)||(8851768-8851828)
chr7 (140-207)||(13865128-13865196)
chr7 (105-169)||(14258679-14258741)
chr7 (105-169)||(16460595-16460657)
chr7 (105-169)||(16579987-16580049)
chr7 (105-169)||(16585614-16585676)
chr7 (11-71)||(20619669-20619729)
chr7 (105-169)||(32301509-32301571)
chr7 (11-71)||(43277353-43277413)
chr7 (4-67)||(4691497-4691560)
chr7 (4-67)||(48213546-48213609)
chr7 (140-216)||(832765-832842)
chr7 (140-216)||(1197945-1198022)
chr7 (104-196)||(13133075-13133166)
chr7 (96-184)||(16077586-16077673)
chr7 (141-216)||(14191832-14191908)
chr7 (140-207)||(17071031-17071099)
chr7 (105-195)||(1489934-1490023)
chr7 (134-216)||(12755442-12755525)
chr7 (151-214)||(14161683-14161746)
chr7 (4-67)||(15576432-15576495)
chr7 (4-43)||(21675510-21675549)
chr7 (4-43)||(39292338-39292377)
chr7 (56-105)||(13133067-13133116)
chr7 (6-67)||(20252945-20253006)
chr7 (266-307)||(24270712-24270753)
chr7 (140-207)||(59162-59230)
chr7 (148-195)||(11309537-11309585)
chr7 (141-216)||(14189038-14189114)
chr7 (65-105)||(14219722-14219762)
chr7 (65-105)||(15096394-15096434)
chr7 (65-105)||(16077624-16077664)
chr7 (65-105)||(19558034-19558074)
chr7 (105-169)||(20487770-20487832)
[»] chr4 (51 HSPs)
chr4 (4-313)||(42874929-42875249)
chr4 (4-313)||(16997657-16997980)
chr4 (4-313)||(11425084-11425405)
chr4 (4-313)||(25090783-25091103)
chr4 (4-296)||(14548773-14549076)
chr4 (4-288)||(10357038-10357334)
chr4 (4-208)||(19609570-19609774)
chr4 (4-265)||(3485091-3485361)
chr4 (123-313)||(37018728-37018929)
chr4 (53-289)||(19734447-19734687)
chr4 (95-265)||(33243949-33244129)
chr4 (123-289)||(19435498-19435675)
chr4 (4-103)||(14630177-14630276)
chr4 (4-105)||(53631075-53631176)
chr4 (6-104)||(13036381-13036479)
chr4 (4-100)||(33243898-33243994)
chr4 (103-216)||(4615772-4615885)
chr4 (4-71)||(15344260-15344327)
chr4 (11-71)||(19435307-19435367)
chr4 (96-186)||(9638080-9638169)
chr4 (5-67)||(35660233-35660295)
chr4 (5-71)||(55582587-55582653)
chr4 (123-251)||(2584937-2585076)
chr4 (4-64)||(3337489-3337549)
chr4 (4-67)||(26922273-26922336)
chr4 (123-216)||(13446685-13446778)
chr4 (4-70)||(37019053-37019119)
chr4 (132-216)||(14933175-14933260)
chr4 (96-196)||(16026788-16026887)
chr4 (132-216)||(27027968-27028053)
chr4 (132-207)||(21061768-21061844)
chr4 (96-186)||(14629945-14630034)
chr4 (4-71)||(25513126-25513193)
chr4 (4-71)||(26445268-26445335)
chr4 (4-66)||(14508150-14508212)
chr4 (4-66)||(19566520-19566582)
chr4 (123-203)||(6511820-6511900)
chr4 (132-216)||(14942381-14942466)
chr4 (132-216)||(15448145-15448230)
chr4 (140-207)||(9638247-9638315)
chr4 (133-207)||(18229899-18229974)
chr4 (4-67)||(45314938-45315001)
chr4 (103-216)||(20899466-20899579)
chr4 (105-186)||(53631136-53631216)
chr4 (106-186)||(16026620-16026699)
chr4 (225-273)||(50160173-50160222)
chr4 (11-63)||(15114614-15114666)
chr4 (4-66)||(2425222-2425284)
chr4 (269-307)||(45315183-45315221)
chr4 (140-207)||(9871310-9871378)
chr4 (140-207)||(51992763-51992831)
[»] chr6 (54 HSPs)
chr6 (4-313)||(27126079-27126399)
chr6 (24-313)||(15891327-15891625)
chr6 (4-288)||(31733863-31734158)
chr6 (4-288)||(17318724-17319020)
chr6 (4-208)||(23150868-23151072)
chr6 (4-192)||(7827234-7827422)
chr6 (4-208)||(18708746-18708949)
chr6 (1-161)||(27318154-27318314)
chr6 (11-129)||(18702889-18703007)
chr6 (203-313)||(7825776-7825886)
chr6 (4-105)||(28947693-28947794)
chr6 (113-216)||(24441158-24441261)
chr6 (4-105)||(19655831-19655932)
chr6 (4-105)||(23491773-23491874)
chr6 (4-105)||(23497371-23497472)
chr6 (11-105)||(19773318-19773412)
chr6 (73-169)||(23655665-23655759)
chr6 (11-105)||(15705220-15705314)
chr6 (103-192)||(22212214-22212303)
chr6 (103-289)||(31735629-31735827)
chr6 (156-208)||(27322172-27322224)
chr6 (4-69)||(13285094-13285159)
chr6 (16-105)||(22806182-22806271)
chr6 (132-207)||(18658448-18658524)
chr6 (96-186)||(23497613-23497702)
chr6 (73-132)||(23655740-23655799)
chr6 (103-216)||(13751060-13751173)
chr6 (213-259)||(16245370-16245416)
chr6 (140-216)||(610973-611050)
chr6 (132-216)||(19444016-19444101)
chr6 (140-216)||(29848247-29848324)
chr6 (11-71)||(22556632-22556692)
chr6 (4-67)||(19234584-19234647)
chr6 (96-186)||(23492015-23492104)
chr6 (4-67)||(25921117-25921180)
chr6 (4-66)||(29044650-29044712)
chr6 (11-69)||(32259233-32259291)
chr6 (132-207)||(16133406-16133482)
chr6 (105-169)||(19773372-19773434)
chr6 (141-207)||(13764592-13764659)
chr6 (4-67)||(18585007-18585070)
chr6 (96-186)||(23500890-23500979)
chr6 (95-169)||(15705264-15705336)
chr6 (105-158)||(23491834-23491886)
chr6 (105-158)||(23497432-23497484)
chr6 (140-207)||(19829696-19829764)
chr6 (105-169)||(22806160-22806222)
chr6 (103-251)||(24266952-24267111)
chr6 (269-313)||(25920790-25920834)
chr6 (105-186)||(19655892-19655972)
chr6 (98-132)||(23655639-23655673)
chr6 (266-307)||(7825754-7825795)
chr6 (266-307)||(19234477-19234518)
chr6 (65-97)||(31735631-31735663)
[»] chr3 (99 HSPs)
chr3 (4-313)||(2842064-2842374)
chr3 (4-313)||(11258597-11258917)
chr3 (4-313)||(35065182-35065502)
chr3 (4-310)||(17519475-17519793)
chr3 (4-310)||(17534337-17534655)
chr3 (11-313)||(35353729-35354042)
chr3 (1-271)||(5206253-5206535)
chr3 (11-288)||(41172980-41173269)
chr3 (4-288)||(15932109-15932404)
chr3 (4-288)||(14508006-14508298)
chr3 (4-287)||(17693231-17693518)
chr3 (11-208)||(44273720-44273917)
chr3 (4-208)||(22307185-22307389)
chr3 (4-208)||(40807242-40807446)
chr3 (4-208)||(17538353-17538557)
chr3 (105-313)||(19884226-19884445)
chr3 (11-194)||(42353283-42353463)
chr3 (11-190)||(13519549-13519725)
chr3 (113-289)||(16728437-16728624)
chr3 (102-265)||(50348806-50348977)
chr3 (204-313)||(44269659-44269768)
chr3 (123-289)||(14153191-14153368)
chr3 (113-289)||(45531332-45531520)
chr3 (160-288)||(5215020-5215159)
chr3 (11-100)||(9511774-9511863)
chr3 (11-100)||(9519749-9519838)
chr3 (4-105)||(17046511-17046612)
chr3 (4-105)||(54876085-54876186)
chr3 (4-105)||(11192430-11192531)
chr3 (4-105)||(17685445-17685546)
chr3 (4-105)||(6156055-6156156)
chr3 (4-105)||(14441517-14441618)
chr3 (4-105)||(19568970-19569072)
chr3 (24-105)||(17691427-17691508)
chr3 (243-310)||(40811919-40811986)
chr3 (11-105)||(18700082-18700176)
chr3 (11-105)||(12470151-12470245)
chr3 (102-191)||(13179399-13179488)
chr3 (11-105)||(43889408-43889502)
chr3 (14-105)||(14671173-14671264)
chr3 (14-105)||(14682672-14682763)
chr3 (4-71)||(15565897-15565964)
chr3 (4-71)||(24546220-24546287)
chr3 (4-71)||(50755983-50756050)
chr3 (11-71)||(14153008-14153068)
chr3 (4-71)||(17207725-17207792)
chr3 (103-289)||(20417227-20417424)
chr3 (4-67)||(54330907-54330970)
chr3 (132-216)||(3394736-3394821)
chr3 (11-71)||(50348635-50348695)
chr3 (4-67)||(50351602-50351665)
chr3 (131-216)||(10550501-10550587)
chr3 (103-195)||(14818278-14818370)
chr3 (269-313)||(11258569-11258613)
chr3 (140-207)||(13523153-13523221)
chr3 (123-194)||(23395786-23395857)
chr3 (96-186)||(6155897-6155986)
chr3 (140-265)||(10562881-10563018)
chr3 (96-186)||(11192200-11192289)
chr3 (132-216)||(179441-179526)
chr3 (96-196)||(11562678-11562777)
chr3 (140-216)||(13520523-13520600)
chr3 (132-216)||(17548285-17548370)
chr3 (132-216)||(18367492-18367577)
chr3 (269-313)||(1208848-1208892)
chr3 (140-207)||(6158637-6158705)
chr3 (132-191)||(6819367-6819427)
chr3 (14-86)||(10542070-10542142)
chr3 (140-207)||(14642294-14642362)
chr3 (11-71)||(40812216-40812276)
chr3 (11-71)||(49900111-49900171)
chr3 (11-70)||(12511232-12511291)
chr3 (105-183)||(19569032-19569109)
chr3 (105-195)||(54876146-54876235)
chr3 (4-66)||(14568661-14568723)
chr3 (105-186)||(17046471-17046551)
chr3 (103-207)||(52338671-52338775)
chr3 (105-196)||(6156005-6156095)
chr3 (105-169)||(12470129-12470191)
chr3 (140-207)||(14250862-14250927)
chr3 (105-169)||(14671151-14671213)
chr3 (105-169)||(14682650-14682712)
chr3 (11-47)||(17937935-17937971)
chr3 (105-157)||(18700136-18700187)
chr3 (140-207)||(37038058-37038126)
chr3 (140-207)||(42324965-42325033)
chr3 (105-195)||(17691468-17691557)
chr3 (105-168)||(43889462-43889523)
chr3 (105-186)||(11192390-11192470)
chr3 (205-250)||(13516530-13516576)
chr3 (105-186)||(14441477-14441557)
chr3 (279-313)||(50351991-50352025)
chr3 (103-192)||(52213183-52213272)
chr3 (266-307)||(12540444-12540485)
chr3 (11-64)||(43928741-43928794)
chr3 (56-100)||(11562927-11562971)
chr3 (123-183)||(16050114-16050172)
chr3 (123-191)||(16059489-16059555)
chr3 (269-313)||(35353701-35353745)
[»] scaffold1662 (1 HSPs)
scaffold1662 (4-313)||(23-343)
[»] chr1 (49 HSPs)
chr1 (4-313)||(42912180-42912500)
chr1 (11-313)||(4596454-4596767)
chr1 (4-313)||(16058916-16059236)
chr1 (4-313)||(21046651-21046971)
chr1 (11-263)||(20634244-20634507)
chr1 (4-288)||(20587832-20588129)
chr1 (4-288)||(20592370-20592667)
chr1 (6-208)||(41227308-41227510)
chr1 (4-265)||(14238214-14238484)
chr1 (11-289)||(7052665-7052951)
chr1 (105-313)||(19675881-19676100)
chr1 (4-176)||(51082496-51082666)
chr1 (73-265)||(38887798-38887999)
chr1 (11-132)||(38887697-38887817)
chr1 (4-105)||(21239897-21239998)
chr1 (4-101)||(51323628-51323725)
chr1 (4-92)||(19676073-19676161)
chr1 (6-71)||(39060479-39060544)
chr1 (4-71)||(1642979-1643046)
chr1 (103-216)||(52983378-52983491)
chr1 (123-207)||(18275157-18275241)
chr1 (6-67)||(41226055-41226116)
chr1 (4-64)||(12710278-12710338)
chr1 (123-209)||(1642680-1642764)
chr1 (103-207)||(51476218-51476322)
chr1 (4-71)||(22824008-22824075)
chr1 (4-67)||(50544239-50544302)
chr1 (132-216)||(21181059-21181144)
chr1 (123-207)||(42696963-42697045)
chr1 (4-66)||(18120993-18121055)
chr1 (140-216)||(7792594-7792671)
chr1 (132-216)||(13528528-13528613)
chr1 (140-207)||(38057395-38057463)
chr1 (140-195)||(44822863-44822919)
chr1 (11-71)||(45496328-45496388)
chr1 (11-71)||(48301315-48301375)
chr1 (123-192)||(18270518-18270587)
chr1 (4-66)||(24720295-24720357)
chr1 (148-216)||(10813273-10813342)
chr1 (100-191)||(13302045-13302135)
chr1 (140-207)||(19761969-19762037)
chr1 (140-195)||(24815594-24815647)
chr1 (132-216)||(16400900-16400986)
chr1 (103-216)||(18823839-18823952)
chr1 (269-307)||(39060246-39060284)
chr1 (18-71)||(11809199-11809252)
chr1 (11-67)||(6833602-6833658)
chr1 (140-207)||(8276734-8276802)
chr1 (269-313)||(45496123-45496167)
[»] chr2 (40 HSPs)
chr2 (4-313)||(36839304-36839621)
chr2 (4-313)||(23969225-23969545)
chr2 (4-313)||(24515316-24515636)
chr2 (4-313)||(28653104-28653424)
chr2 (4-313)||(17306617-17306937)
chr2 (4-288)||(9975083-9975379)
chr2 (4-263)||(27485072-27485343)
chr2 (4-208)||(24781442-24781646)
chr2 (6-194)||(5031734-5031922)
chr2 (113-265)||(19358110-19358272)
chr2 (113-270)||(14693380-14693547)
chr2 (11-100)||(23069059-23069148)
chr2 (114-265)||(10897503-10897666)
chr2 (4-71)||(43707886-43707953)
chr2 (14-105)||(9784931-9785022)
chr2 (4-71)||(22686223-22686290)
chr2 (96-207)||(3538981-3539091)
chr2 (4-66)||(21316263-21316325)
chr2 (17-71)||(25587301-25587355)
chr2 (102-207)||(44071733-44071837)
chr2 (11-71)||(19201810-19201870)
chr2 (4-64)||(24273861-24273921)
chr2 (140-199)||(5985336-5985395)
chr2 (4-66)||(23609865-23609927)
chr2 (102-186)||(25141349-25141432)
chr2 (105-169)||(9784909-9784971)
chr2 (11-71)||(21368490-21368550)
chr2 (132-195)||(31520371-31520435)
chr2 (4-67)||(1384287-1384350)
chr2 (113-191)||(18391046-18391124)
chr2 (96-186)||(25141159-25141248)
chr2 (4-71)||(28345677-28345744)
chr2 (132-216)||(6478034-6478119)
chr2 (6-66)||(21336056-21336116)
chr2 (104-191)||(27851836-27851922)
chr2 (105-158)||(23069113-23069165)
chr2 (103-191)||(27860542-27860629)
chr2 (65-105)||(3539042-3539082)
chr2 (140-207)||(18389041-18389109)
chr2 (65-97)||(27851889-27851921)
[»] chr8 (53 HSPs)
chr8 (4-313)||(20179123-20179443)
chr8 (4-313)||(42818509-42818820)
chr8 (4-208)||(19140011-19140215)
chr8 (4-208)||(39936612-39936816)
chr8 (11-289)||(20084247-20084532)
chr8 (11-188)||(6102362-6102536)
chr8 (123-289)||(22259092-22259267)
chr8 (4-105)||(5760882-5760983)
chr8 (203-288)||(24713323-24713408)
chr8 (116-207)||(17217830-17217920)
chr8 (14-105)||(21346011-21346102)
chr8 (141-289)||(23947348-23947509)
chr8 (103-289)||(23888873-23889070)
chr8 (14-105)||(23914273-23914364)
chr8 (4-71)||(20517719-20517786)
chr8 (4-71)||(22344425-22344492)
chr8 (4-71)||(22356085-22356152)
chr8 (123-253)||(22584461-22584602)
chr8 (123-207)||(17907695-17907779)
chr8 (6-71)||(36305042-36305107)
chr8 (96-196)||(36728025-36728124)
chr8 (4-64)||(32949991-32950051)
chr8 (4-67)||(4381394-4381457)
chr8 (4-71)||(22483130-22483197)
chr8 (96-196)||(31723309-31723408)
chr8 (4-64)||(361814-361874)
chr8 (11-67)||(22474139-22474195)
chr8 (4-67)||(18817063-18817126)
chr8 (96-186)||(31723499-31723588)
chr8 (123-207)||(22244645-22244729)
chr8 (11-71)||(18833854-18833914)
chr8 (141-216)||(20454472-20454548)
chr8 (141-216)||(20455229-20455305)
chr8 (141-216)||(20460207-20460283)
chr8 (105-169)||(21346062-21346124)
chr8 (96-207)||(22318655-22318765)
chr8 (105-186)||(5760842-5760922)
chr8 (4-66)||(17979018-17979080)
chr8 (5-67)||(18815425-18815487)
chr8 (106-203)||(45471168-45471264)
chr8 (11-60)||(17437927-17437976)
chr8 (11-71)||(5082821-5082881)
chr8 (269-313)||(12577014-12577058)
chr8 (140-195)||(15635922-15635978)
chr8 (148-207)||(19882207-19882267)
chr8 (105-169)||(23914251-23914313)
chr8 (15-67)||(36733126-36733178)
chr8 (140-207)||(39695272-39695340)
chr8 (4-67)||(5080396-5080459)
chr8 (269-307)||(38988453-38988491)
chr8 (269-307)||(39019550-39019588)
chr8 (140-207)||(25849190-25849258)
chr8 (96-132)||(36727854-36727890)
[»] scaffold0111 (2 HSPs)
scaffold0111 (4-313)||(13138-13456)
scaffold0111 (4-313)||(19405-19723)
[»] chr5 (30 HSPs)
chr5 (4-310)||(19920767-19921084)
chr5 (73-289)||(36509487-36509712)
chr5 (4-132)||(32607927-32608054)
chr5 (11-132)||(36509386-36509506)
chr5 (73-204)||(32608035-32608164)
chr5 (4-105)||(20565903-20566004)
chr5 (103-265)||(21406391-21406562)
chr5 (11-71)||(20198197-20198257)
chr5 (4-71)||(30611936-30612003)
chr5 (140-216)||(24277348-24277425)
chr5 (140-216)||(24384788-24384865)
chr5 (4-71)||(21399605-21399672)
chr5 (140-207)||(25250633-25250700)
chr5 (140-207)||(25314418-25314485)
chr5 (4-71)||(30613896-30613963)
chr5 (96-158)||(20565701-20565762)
chr5 (123-209)||(23200285-23200369)
chr5 (5-66)||(16605206-16605267)
chr5 (11-71)||(23199998-23200058)
chr5 (11-71)||(33895491-33895551)
chr5 (4-67)||(22110987-22111050)
chr5 (5-63)||(1627983-1628041)
chr5 (4-66)||(18744038-18744100)
chr5 (141-216)||(17812629-17812705)
chr5 (135-216)||(8952787-8952869)
chr5 (4-66)||(14026409-14026471)
chr5 (140-207)||(10953214-10953282)
chr5 (103-186)||(22357664-22357747)
chr5 (282-314)||(16062575-16062607)
chr5 (96-183)||(21618740-21618826)
[»] scaffold0737 (1 HSPs)
scaffold0737 (4-288)||(5315-5610)
[»] scaffold1817 (1 HSPs)
scaffold1817 (6-313)||(1-318)
[»] scaffold0064 (1 HSPs)
scaffold0064 (4-288)||(57902-58198)
[»] scaffold0632 (1 HSPs)
scaffold0632 (4-273)||(335-615)
[»] scaffold0384 (1 HSPs)
scaffold0384 (4-208)||(7987-8192)
[»] scaffold0134 (1 HSPs)
scaffold0134 (4-208)||(9828-10032)
[»] scaffold0375 (1 HSPs)
scaffold0375 (4-205)||(8905-9106)
[»] scaffold0546 (2 HSPs)
scaffold0546 (4-265)||(10975-11245)
scaffold0546 (4-265)||(7155-7425)
[»] scaffold0109 (2 HSPs)
scaffold0109 (4-265)||(579-849)
scaffold0109 (4-265)||(5882-6152)
[»] scaffold0077 (1 HSPs)
scaffold0077 (28-265)||(33530-33776)
[»] scaffold0026 (1 HSPs)
scaffold0026 (6-288)||(145889-146180)
[»] scaffold0207 (1 HSPs)
scaffold0207 (49-289)||(15156-15405)
[»] scaffold0509 (1 HSPs)
scaffold0509 (38-208)||(9397-9564)
[»] scaffold1633 (1 HSPs)
scaffold1633 (11-265)||(388-648)
[»] scaffold0146 (2 HSPs)
scaffold0146 (4-192)||(22322-22508)
scaffold0146 (140-313)||(23526-23710)
[»] scaffold0439 (3 HSPs)
scaffold0439 (4-265)||(11340-11609)
scaffold0439 (12-105)||(3768-3861)
scaffold0439 (105-196)||(3718-3808)
[»] scaffold0047 (1 HSPs)
scaffold0047 (4-196)||(78322-78514)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-172)||(29442-29608)
[»] scaffold0039 (1 HSPs)
scaffold0039 (13-265)||(10541-10787)
[»] scaffold0205 (1 HSPs)
scaffold0205 (4-172)||(29894-30062)
[»] scaffold0042 (2 HSPs)
scaffold0042 (113-289)||(47280-47466)
scaffold0042 (123-196)||(28532-28603)
[»] scaffold0104 (4 HSPs)
scaffold0104 (11-132)||(7542-7662)
scaffold0104 (11-132)||(14173-14293)
scaffold0104 (77-132)||(16575-16630)
scaffold0104 (77-132)||(18595-18650)
[»] scaffold1186 (2 HSPs)
scaffold1186 (4-103)||(1062-1161)
scaffold1186 (96-186)||(830-919)
[»] scaffold0005 (2 HSPs)
scaffold0005 (4-103)||(187107-187206)
scaffold0005 (96-186)||(187349-187438)
[»] scaffold0098 (1 HSPs)
scaffold0098 (6-104)||(39449-39547)
[»] scaffold1283 (2 HSPs)
scaffold1283 (4-105)||(1069-1170)
scaffold1283 (105-186)||(1130-1210)
[»] scaffold0061 (4 HSPs)
scaffold0061 (4-105)||(15188-15289)
scaffold0061 (4-105)||(24246-24347)
scaffold0061 (105-186)||(15249-15329)
scaffold0061 (105-186)||(24307-24387)
[»] scaffold0017 (1 HSPs)
scaffold0017 (4-105)||(25865-25966)
[»] scaffold0021 (1 HSPs)
scaffold0021 (12-105)||(168786-168879)
[»] scaffold1815 (1 HSPs)
scaffold1815 (144-289)||(1172-1327)
[»] scaffold0181 (1 HSPs)
scaffold0181 (103-207)||(34097-34201)
[»] scaffold0177 (1 HSPs)
scaffold0177 (203-270)||(1653-1720)
[»] scaffold0083 (4 HSPs)
scaffold0083 (4-99)||(584-679)
scaffold0083 (4-99)||(5888-5983)
scaffold0083 (105-207)||(645-745)
scaffold0083 (105-207)||(5949-6049)
[»] scaffold0292 (2 HSPs)
scaffold0292 (11-105)||(6862-6956)
scaffold0292 (105-169)||(6840-6902)
[»] scaffold0261 (1 HSPs)
scaffold0261 (11-102)||(7116-7207)
[»] scaffold0018 (2 HSPs)
scaffold0018 (14-105)||(21001-21092)
scaffold0018 (105-169)||(20979-21041)
[»] scaffold0002 (1 HSPs)
scaffold0002 (102-191)||(127500-127589)
[»] scaffold0096 (2 HSPs)
scaffold0096 (11-100)||(21422-21511)
scaffold0096 (105-169)||(21395-21457)
[»] scaffold0149 (1 HSPs)
scaffold0149 (140-265)||(20821-20957)
[»] scaffold0575 (2 HSPs)
scaffold0575 (14-105)||(5938-6029)
scaffold0575 (105-169)||(5989-6051)
[»] scaffold0452 (2 HSPs)
scaffold0452 (11-94)||(13274-13357)
scaffold0452 (105-169)||(13328-13390)
[»] scaffold0034 (1 HSPs)
scaffold0034 (11-94)||(120270-120353)
[»] scaffold0273 (1 HSPs)
scaffold0273 (103-216)||(6853-6966)
[»] scaffold0232 (2 HSPs)
scaffold0232 (16-105)||(3619-3708)
scaffold0232 (105-156)||(3609-3659)
[»] scaffold0125 (2 HSPs)
scaffold0125 (4-71)||(27683-27750)
scaffold0125 (269-313)||(27444-27488)
[»] scaffold0188 (1 HSPs)
scaffold0188 (131-216)||(370-456)
[»] scaffold0032 (1 HSPs)
scaffold0032 (13-71)||(62581-62639)
[»] scaffold0413 (1 HSPs)
scaffold0413 (103-207)||(10918-11022)
[»] scaffold0453 (1 HSPs)
scaffold0453 (104-207)||(3277-3380)
[»] scaffold0334 (1 HSPs)
scaffold0334 (4-64)||(1475-1535)
[»] scaffold0004 (2 HSPs)
scaffold0004 (11-71)||(66641-66701)
scaffold0004 (123-207)||(59585-59669)
[»] scaffold1695 (2 HSPs)
scaffold1695 (96-186)||(625-714)
scaffold1695 (65-105)||(665-705)
[»] scaffold0379 (4 HSPs)
scaffold0379 (12-71)||(10094-10153)
scaffold0379 (213-273)||(4616-4677)
scaffold0379 (213-273)||(14662-14723)
scaffold0379 (270-307)||(9815-9852)
[»] scaffold0369 (1 HSPs)
scaffold0369 (16-71)||(16584-16639)
[»] scaffold0203 (1 HSPs)
scaffold0203 (8-71)||(18732-18795)
[»] scaffold0086 (1 HSPs)
scaffold0086 (4-71)||(36118-36185)
[»] scaffold0008 (2 HSPs)
scaffold0008 (102-196)||(136323-136416)
scaffold0008 (141-216)||(12253-12329)
[»] scaffold2046 (1 HSPs)
scaffold2046 (103-216)||(343-456)
[»] scaffold0490 (1 HSPs)
scaffold0490 (131-216)||(5057-5143)
[»] scaffold0028 (2 HSPs)
scaffold0028 (105-147)||(63835-63877)
scaffold0028 (103-207)||(3795-3898)
[»] scaffold0529 (2 HSPs)
scaffold0529 (96-196)||(7596-7695)
scaffold0529 (4-67)||(7904-7967)
[»] scaffold0409 (2 HSPs)
scaffold0409 (114-214)||(462-562)
scaffold0409 (114-214)||(8717-8817)
[»] scaffold0309 (2 HSPs)
scaffold0309 (131-207)||(6148-6225)
scaffold0309 (131-207)||(8300-8377)
[»] scaffold0070 (1 HSPs)
scaffold0070 (132-216)||(8290-8375)
[»] scaffold1539 (1 HSPs)
scaffold1539 (11-71)||(1290-1350)
[»] scaffold0962 (1 HSPs)
scaffold0962 (141-216)||(1272-1348)
[»] scaffold0414 (1 HSPs)
scaffold0414 (11-71)||(11955-12015)
[»] scaffold0180 (1 HSPs)
scaffold0180 (4-64)||(28970-29030)
[»] scaffold0151 (1 HSPs)
scaffold0151 (4-64)||(9445-9505)
[»] scaffold0123 (2 HSPs)
scaffold0123 (11-67)||(16325-16381)
scaffold0123 (133-207)||(2013-2088)
[»] scaffold0106 (1 HSPs)
scaffold0106 (4-64)||(21123-21183)
[»] scaffold0020 (1 HSPs)
scaffold0020 (11-71)||(142996-143056)
[»] scaffold0241 (6 HSPs)
scaffold0241 (96-186)||(1654-1743)
scaffold0241 (4-67)||(5104-5167)
scaffold0241 (106-196)||(4987-5076)
scaffold0241 (15-67)||(1951-2003)
scaffold0241 (106-196)||(1834-1923)
scaffold0241 (96-154)||(4839-4896)
[»] scaffold0112 (1 HSPs)
scaffold0112 (266-313)||(1979-2026)
[»] scaffold0108 (2 HSPs)
scaffold0108 (4-67)||(7383-7446)
scaffold0108 (140-207)||(5657-5725)
[»] scaffold0074 (1 HSPs)
scaffold0074 (151-214)||(767-830)
[»] scaffold0371 (1 HSPs)
scaffold0371 (102-207)||(16846-16950)
[»] scaffold0364 (1 HSPs)
scaffold0364 (14-64)||(7523-7573)
[»] scaffold0256 (1 HSPs)
scaffold0256 (4-62)||(3123-3181)
[»] scaffold0117 (1 HSPs)
scaffold0117 (131-216)||(40958-41044)
[»] scaffold0056 (2 HSPs)
scaffold0056 (102-207)||(66253-66357)
scaffold0056 (269-307)||(15752-15790)
[»] scaffold0607 (1 HSPs)
scaffold0607 (140-216)||(2939-3016)
[»] scaffold0429 (1 HSPs)
scaffold0429 (132-216)||(2724-2809)
[»] scaffold0126 (1 HSPs)
scaffold0126 (132-216)||(6032-6117)
[»] scaffold1276 (1 HSPs)
scaffold1276 (56-100)||(390-434)
[»] scaffold0825 (1 HSPs)
scaffold0825 (132-195)||(1549-1613)
[»] scaffold0630 (1 HSPs)
scaffold0630 (140-207)||(8304-8372)
[»] scaffold0230 (2 HSPs)
scaffold0230 (4-67)||(7455-7518)
scaffold0230 (266-310)||(7672-7716)
[»] scaffold0220 (2 HSPs)
scaffold0220 (141-207)||(16004-16071)
scaffold0220 (141-207)||(13186-13253)
[»] scaffold0113 (2 HSPs)
scaffold0113 (4-67)||(34652-34715)
scaffold0113 (104-207)||(34517-34619)
[»] scaffold0065 (1 HSPs)
scaffold0065 (140-207)||(53379-53446)
[»] scaffold0859 (1 HSPs)
scaffold0859 (56-105)||(3984-4033)
[»] scaffold0107 (1 HSPs)
scaffold0107 (140-216)||(3111-3188)
[»] scaffold0639 (1 HSPs)
scaffold0639 (11-71)||(7198-7258)
[»] scaffold0507 (1 HSPs)
scaffold0507 (11-71)||(2443-2503)
[»] scaffold0445 (1 HSPs)
scaffold0445 (116-191)||(2652-2727)
[»] scaffold0328 (1 HSPs)
scaffold0328 (140-207)||(19388-19456)
[»] scaffold0251 (1 HSPs)
scaffold0251 (102-158)||(20730-20785)
[»] scaffold0213 (1 HSPs)
scaffold0213 (4-67)||(18552-18615)
[»] scaffold0063 (1 HSPs)
scaffold0063 (282-313)||(61907-61938)
[»] scaffold0010 (1 HSPs)
scaffold0010 (145-207)||(127164-127226)
[»] scaffold0174 (1 HSPs)
scaffold0174 (266-307)||(15170-15211)
[»] scaffold0338 (1 HSPs)
scaffold0338 (141-216)||(3688-3764)


Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 46386686 - 46387006
Alignment:
Q  1 tatggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  46386686 tatggtgtttaagagtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgcgaat 46386785  T
Q  101 gttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgc 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46386786 gttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgc 46386885  T
Q  201 ta-----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgt 289  Q
    ||           ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46386886 tatgttgtgaagttgttgtatgttgctgtctctgctgtattaattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgt 46386985  T
Q  290 caatgtcgttaaagttgtaag 310  Q
    |||||||||||||||||||||    
T  46386986 caatgtcgttaaagttgtaag 46387006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 12465864 - 12466182
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12465864 tgtttaagagtatttaacttatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgt 12465963  T
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta--- 202  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||       
T  12465964 tgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagtaaataatgttgttataccattcaagttgttattattaatgatgttatgt 12466063  T
Q  203 --------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatg 294  Q
            ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12466064 tgttaagttgttgtatgttgctgtctctgctgtattgattaataaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatg 12466163  T
Q  295 tcgttaaagttgtaagttg 313  Q
    |||||||||||| ||||||    
T  12466164 tcgttaaagttgcaagttg 12466182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 20585806 - 20585486
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  20585806 ggtgtttaagagtatttaacttatgttgtgatggatctaatttggtttgatgtgaacatttttgttggataatttgaaatacatatattatgtgaatgtt 20585707  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20585706 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 20585607  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20585606 gtcgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 20585507  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  20585506 tgtcgttaaagttgtaagttg 20585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 44374396 - 44374076
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44374396 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 44374297  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  44374296 gttgttgaataatttgagttacgtatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgttat 44374197  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  44374196 gttgtgaagttgttgtatgttgttgtctttgctgtattgattattaaataattaagttgcatatgttggtcaagttgttaaagttgtaggttgttgtcaa 44374097  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  44374096 tgtcgttaaagttgtaagttg 44374076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 44383261 - 44382941
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44383261 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 44383162  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  44383161 gttgttgaataatttgagttacgtatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgttat 44383062  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  44383061 gttgtgaagttgttgtatgttgttgtctttgctgtattgattattaaataattaagttgcatatgttggtcaagttgttaaagttgtaggttgttgtcaa 44382962  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  44382961 tgtcgttaaagttgtaagttg 44382941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 19282542 - 19282222
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19282542 ggtgtttaagagtatttaacctatgttgtaatggatctaatttgatttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 19282443  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    |||||||||||||||||||||||||||||||| || ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19282442 gttgttgaataatttgagttacatatatttatatggaaaagatataatatagaaaataatgttgttataccattcaagttgttattattaacgatgctat 19282343  T
Q  204 g-----------ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    |           |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  19282342 gttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgtttgtcaagttgttaaaattgtaagttgttgtcaa 19282243  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  19282242 tgtcgttaaagttgtaagttg 19282222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 11066918 - 11066714
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11066918 ggtgtttaagagtatttaacttatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaagtacatatattatgtgaatgtt 11066819  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    || |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11066818 gtcgttgaataatttgagttacatatatttatgtggaaaatgtatgatatggaaaataatgttgttataccattcaagttgttattattaatgatgctat 11066719  T
Q  204 gttgt 208  Q
    |||||    
T  11066718 gttgt 11066714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 13148074 - 13148278
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13148074 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 13148173  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  13148174 gttgttgaataatttgagttacatatatttatgcggaaaaggtatgatatagaaaataatatttttataccattcaagttgttattattaatgatgctat 13148273  T
Q  204 gttgt 208  Q
    |||||    
T  13148274 gttgt 13148278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 12127766 - 12127970
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  12127766 ggtgtttaagagtatttaacgtatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacacatattatgtgaatgtt 12127865  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12127866 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatactat 12127965  T
Q  204 gttgt 208  Q
    |||||    
T  12127966 gttgt 12127970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 6 - 208
Target Start/End: Complemental strand, 12371723 - 12371524
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||      
T  12371723 tgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt-- 12371626  T
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgt 205  Q
     |||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  12371625 -gttgaataatttgagttatatatatttacgtggaaaaagtatgatatagaaaataaagtttttataccattcaagttgttattattaatgatgctatgt 12371527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 32434191 - 32434392
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgtt-ggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgt 102  Q
    |||||| |||||||||||| ||||||| ||   |||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| |    
T  32434191 ggtgtttaagagtatttaatctatgttatgaaaggatctaatttggtttgacgtgaatatatttgttggataatttgaaatacatatattatgtgaatat 32434290  T
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  32434291 tgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttgttattaatgatgtta 32434390  T
Q  203 tg 204  Q
    ||    
T  32434391 tg 32434392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 113 - 289
Target Start/End: Original strand, 37785076 - 37785263
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta---------- 202  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  37785076 taatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtgaag 37785175  T
Q  203 -tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgt 289  Q
     ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |  | |||| ||||||||||||    
T  37785176 ttgttgtatgttgctgtctctactgtattgattattaaatcattaagttgcatatgttagtcaagattgtcaagttgtaagttgttgt 37785263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 14928935 - 14929100
Alignment:
Q  5 gtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttg 104  Q
    ||||| || ||||| |||||||||||||| || |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  14928935 gtgtttaaaagtatctaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataacttgaaatacatatattatgtgaatgttg 14929034  T
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttata 172  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  14929035 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttata 14929100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 15352401 - 15352566
Alignment:
Q  5 gtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttg 104  Q
    ||||| || ||||| |||||||||||||| || |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  15352401 gtgtttaaaagtatctaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataacttgaaatacatatattatgtgaatgttg 15352500  T
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttata 172  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  15352501 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttata 15352566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 123 - 289
Target Start/End: Original strand, 43277546 - 43277723
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-----------tgttgtatg 211  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||    
T  43277546 tacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatg 43277645  T
Q  212 ttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| | |||| ||||||||||||    
T  43277646 ttactgtctctgctgtattgattattaaatcattaagttgcatatgttagtcaaagttg-tcaagttgtaagttgttgt 43277723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 123 - 265
Target Start/End: Complemental strand, 3287247 - 3287100
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgt-atgttgctgtct- 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||| |     
T  3287247 tacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatg 3287148  T
Q  221 ---ctgttgtattgattattaaatcattaagttgcatatgttggtcaa 265  Q
       |||||||||||||||||||||||||||||| |||||||| |||||    
T  3287147 ttgctgttgtattgattattaaatcattaagtttcatatgttagtcaa 3287100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 123 - 265
Target Start/End: Original strand, 18875646 - 18875799
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-----------tgttgtatg 211  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||           |||||||||    
T  18875646 tacatatatttatgtggaaaaggtatgatatagaaaataatgttgttatacaattcaagttgttattattaatgatgctatgttgtgaagttgttgtatg 18875745  T
Q  212 ttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaa 265  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  18875746 ttgttgtctctgctgtattgattattaaatcattaagttgcatatgttagtcaa 18875799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 15720226 - 15720130
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  15720226 ggtgtttaagagtatttaacttatgttgtgatggatctaatttggtttgatgtgaatatctttgttggataatttgaaatacatatattaagtgaat 15720130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 33001364 - 33001269
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaa 99  Q
    |||||| ||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  33001364 ggtgtttaagagaatttaacctatgttgtgatggacctaatttggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaa 33001269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 14258795 - 14258701
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  14258795 aagagtatttaacatttgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 14258701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 11053976 - 11053876
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  ||||||||| |||||||||| ||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||    
T  11053976 tgttgttggttaatttgagctacatatatt-atgtggaaaatgtatgatatagaaaatattgttgtttatatcattcaagttgttattattaatgttgct 11053878  T
Q  202 at 203  Q
    ||    
T  11053877 at 11053876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 16580100 - 16580009
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  16580100 agtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 16580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 16585563 - 16585654
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  16585563 agtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 16585654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 32301625 - 32301531
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||| ||||||||||||| || ||||||||||| |||||||  |||||||| ||||||||||||||||||| ||||    
T  32301625 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatatttgttgaataatttgagatacatatattatgtgaatattgt 32301531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 16460546 - 16460635
Alignment:
Q  16 tatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  16460546 tatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 16460635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 15281607 - 15281505
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    ||||||||  || ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||    
T  15281607 tgttgttggttattttgaattacatatatt-atgtggaaagtgtatgatatagaaaataatgttgttatatcatccaagttgttatta-taatgttgcta 15281510  T
Q  203 tgttg 207  Q
    |||||    
T  15281509 tgttg 15281505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 1489907 - 1489974
Alignment:
Q  38 atctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  1489907 atctaatttggtttgacgtgaatatctttgttggataatttgatatacatatattatgtgaatattgt 1489974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 20487883 - 20487792
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| |  |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  20487883 agtatttaacatgtgttgtgatggatctaatttgctcggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 20487792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 8757130 - 8757215
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  8757130 ttatgtgaaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 8757215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 15096385 - 15096495
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || ||||    
T  15096385 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaa 15096482  T
Q  195 tgatgctatgttg 207  Q
    || || |||||||    
T  15096483 tgttgttatgttg 15096495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 18875455 - 18875515
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  18875455 aagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 18875515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 13745802 - 13745869
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  13745802 ggtgtttaagagtatttaacctatgttgtgatggatctaacttggtttcacgtgaatatctttgttgg 13745869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 33001303 - 33001203
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatg 204  Q
    |||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||||| || ||| |||||| || ||||||| | |||||||    
T  33001303 ttgttggataatttgagatacatatatt-atgtgaaaa-tgtatgatatagaaaattatgttgttgtatcatccaagttattgttattaacgttgctatg 33001206  T
Q  205 ttg 207  Q
    |||    
T  33001205 ttg 33001203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 19558025 - 19558135
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||| |||||  |||||| ||| ||||||||||||| ||||| |    
T  19558025 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatatagttgttcatatcattcaagttgttgttattga 19558122  T
Q  195 tgatgctatgttg 207  Q
    || || |||||||    
T  19558123 tgttgttatgttg 19558135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 25941888 - 25941821
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| |||| |||| ||| |||||||||||||||||| ||||    
T  25941888 ggtgtttaagagtatttaacctatgttgtgatggaactaacttggtttgacgtgaatatctttattgg 25941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 3289548 - 3289632
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||| | | ||||||||||    
T  3289548 tacatatatt-atgtggaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgttattattgacgttgctatgttg 3289632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 40555485 - 40555562
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  40555485 aaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 40555562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 3287440 - 3287380
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||| |||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  3287440 aagaatatttaacgtatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 3287380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 13894545 - 13894485
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| ||||||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  13894545 ggtgtttaagagtatttaacctatgttgtgatgaatctaatttggcttgacgtgaatatct 13894485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 13133257 - 13133346
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||| |||||| ||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  13133257 tgaatattgttgctgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 13133346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 13745386 - 13745445
Alignment:
Q  12 agagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||||| || |||||| ||| ||||| |||||||||||||||||    
T  13745386 agagtatttaacctatgttgtgatgaatctaacttggtttgatgtgaatatctttgttgg 13745445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 14161456 - 14161523
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||| ||||||||||||||| || ||||||| | ||| |||||||||||||||||||||||    
T  14161456 ggtgtttaagattatttaacctatgttttgatggatcttacttggtttgacgtgaatatctttgttgg 14161523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 14219713 - 14219802
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||| || || ||||||| ||| |||||||||||||    
T  14219713 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatag-aagtattgttgttcatatcattcaagttgtt 14219802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 21735237 - 21735312
Alignment:
Q  133 tatgtgaaaaatgtatgatatagaaaataatgttgttat-accattcaagttgttattattaatgatgctatgttg 207  Q
    |||||| ||||||||||| ||||||||||  |||||||| | ||||||||||||||||||||||  ||||||||||    
T  21735237 tatgtggaaaatgtatgagatagaaaatatcgttgttattatcattcaagttgttattattaatattgctatgttg 21735312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 24270583 - 24270646
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || || ||| ||| |||||||||||||||||||    
T  24270583 ggtgtttaagagtatttaacctatgttgtgatgaatttaacttggtttgacgtgaatatctttg 24270646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 15139468 - 15139364
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgc 200  Q
    ||||||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||| ||||| || ||||||||||| | |||||| ||     
T  15139468 ttgttgttggataatttgagatacatatatt-atgtgaacattgtatgatatag-aaatattgttgtttatatcaatcaagttgttagtgttaatgttgt 15139371  T
Q  201 tatgttg 207  Q
    |||||||    
T  15139370 tatgttg 15139364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 4325366 - 4325289
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||  | |||||||| | ||||||    
T  4325366 aaaatgtatgatatagaaaatatcgttgttattatcattcaagttgttattattaatatttctatgttgcaagttgct 4325289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 13408082 - 13408005
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttat-accattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  ||||| || | ||||||||||||||||||||||  |||||||||| | ||||||    
T  13408082 aaaatgtatgatatagaaaatatcgttgtaattatcattcaagttgttattattaatattgctatgttgcaagttgct 13408005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 8851768 - 8851828
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||| |||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||||||    
T  8851768 aagattatttaacctatgtggtgatggatctaatttggtttgatgtgaatatcgttgttgg 8851828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 13865128 - 13865196
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||||||  ||||||| || |||| |||||||||||||||||  ||||||||||    
T  13865128 aaaatgtatgatatagaaaatatcgttgttattatcattgaagttgttattattaatattgctatgttg 13865196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 14258741 - 14258679
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  14258741 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 14258679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 16460595 - 16460657
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  16460595 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 16460657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 16580049 - 16579987
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  16580049 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 16579987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 16585614 - 16585676
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  16585614 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 16585676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 20619729 - 20619669
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||| || ||| ||||||||||||| ||||| ||||||||| |||||||    
T  20619729 aagagtatttaacctacgtggtgatggatctaatttggtttgatgtgaatatccttgttgg 20619669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 32301571 - 32301509
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  32301571 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 32301509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 43277353 - 43277413
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||| ||||||||| ||||||||| ||| |||  ||||||||||||||||||    
T  43277353 aagagtatttaacatatgttgtgatggatctaacttggtttagcgtgaatatctttgttgg 43277413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 4691497 - 4691560
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| |||||||||||||| |||||||| || |||||| | | |||||||||||||||||||    
T  4691497 ggtgtttaagagtatttaaccaatgttgtgatgaatctaactaggtttgacgtgaatatctttg 4691560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 48213546 - 48213609
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| |||| |||||||||||||||||| || |||||| ||| ||||||| |||||||||||    
T  48213546 ggtgtttaagaatatttaacctatgttgtgatgaatctaacttggtttgacgcgaatatctttg 48213609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 832765 - 832842
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||| ||||||||  ||| || ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  832765 aaaatgtatgataaagaaaatatcgttttttatatcattcaagttgttattattaatattgctatgttgcaagttgct 832842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 1197945 - 1198022
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||| ||||||||  ||| || ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  1197945 aaaatgtatgataaagaaaatatcgttttttatatcattcaagttgttattattaatattgctatgttgcaagttgct 1198022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 13133075 - 13133166
Alignment:
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatg 196  Q
    |||||||||||||||||| |||||||| ||||||||| | |||||| ||||  ||||| ||||||| ||| ||||||||||||| || ||||||    
T  13133075 gttgttgaataatttgagatacatata-ttatgtgaatattgtatggtata-taaatattgttgttcatatcattcaagttgttgttgttaatg 13133166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 16077673 - 16077586
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttg 184  Q
    ||||||||||||||| |||||||||  ||||| || ||||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||    
T  16077673 tgaatgttgttgttggataatttgaaatacatgta-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttg 16077586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 14191832 - 14191908
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||| ||||| | ||||||    
T  14191832 aaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctttgttgcaagttgct 14191908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 17071031 - 17071099
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||| ||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  17071031 aaaatgtatgatataaaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 17071099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 1489934 - 1490023
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaat 195  Q
    |||||| |||||||||  |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || |||||    
T  1489934 ttgttggataatttgatatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaat 1490023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 12755442 - 12755525
Alignment:
Q  134 atgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||| ||||||||||||||||||||||  |||| |||||  |||||||||||||| ||||||  | |||||||| | ||||||    
T  12755442 atgtggaaaatgtatgatatagaaaatatcgttgtttatataattcaagttgttatgattaatatttctatgttgcaagttgct 12755525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 14161683 - 14161746
Alignment:
Q  151 tatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtatgttg 214  Q
    |||||||||||||||||||||| ||| |||| |||| ||||||||| ||  |||||||| ||||    
T  14161683 tatagaaaataatgttgttatatcatccaagatgttgttattaatgttgtcatgttgtaagttg 14161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 15576432 - 15576495
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||| ||||||||| ||||||||| |  |||||| ||| |||||||||||||||||||    
T  15576432 ggtgtttaagggtatttaacttatgttgtgattaatctaacttggtttgacgtgaatatctttg 15576495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 21675510 - 21675549
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaa 43  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  21675510 ggtgtttaagagtatttaacctatgttgtgatggatctaa 21675549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 39292338 - 39292377
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaa 43  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  39292338 ggtgtttaagagtatttaacctatgttgtgatggatctaa 39292377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 13133067 - 13133116
Alignment:
Q  56 tgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||| ||||||  |||||||| ||||||||||||||||||| ||||    
T  13133067 tgaatatcgttgttgaataatttgagatacatatattatgtgaatattgt 13133116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 20252945 - 20253006
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||| ||||||||||||||||||||||| || |||||  ||| |||||| | ||||||||||    
T  20252945 tgtttaagagtatttaacctatgttgtgatgaatctatcttggtttgacataaatatctttg 20253006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 24270712 - 24270753
Alignment:
Q  266 gttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  24270712 gttgttaaagttgtaagttgttgtcgatgtcgttgaagttgt 24270753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 59162 - 59230
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| |||| || ||||||||||| ||| ||||||||||    
T  59162 aaaatgtatgatatagaaattattattgtttatatcatttaaattgttattattgatgttgctatgttg 59230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 11309585 - 11309537
Alignment:
Q  148 tgatatagaaaataatgttgtt-ataccattcaagttgttattattaat 195  Q
    |||||||||||||| ||||||| |||  |||||||||||||||||||||    
T  11309585 tgatatagaaaatattgttgtttatattattcaagttgttattattaat 11309537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 14189038 - 14189114
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||| ||||||  |||||| ||| | ||||||||||||||||||||  |||| ||||||| ||||||    
T  14189038 aaatgtgtgatatataaaatatcgttgtttatatctttcaagttgttattattaatattgctttgttgtaagttgct 14189114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 14219722 - 14219762
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  14219722 ttgttggataatttgagatacatatattatgtgaatattgt 14219762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 15096394 - 15096434
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  15096394 ttgttggataatttgagatacatatattatgtgaatattgt 15096434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 16077664 - 16077624
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  16077664 ttgttggataatttgaaatacatgtattatgtgaatattgt 16077624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 19558034 - 19558074
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  19558034 ttgttggataatttgagatacatatattatgtgaatattgt 19558074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 20487832 - 20487770
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||| ||||||| | |||||||||||    
T  20487832 ttgttgaataatttgagatacatata-ttatgtgaatattgtaagatatag-acataatgttgtt 20487770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 42875249 - 42874929
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| | ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  42875249 ggtgtttaggagtatttaacctatgttgtgatggatctaatttggtttgacatgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 42875150  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42875149 gttgttgaataatttgagttacatatatttatgtggaaaaagtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 42875050  T
Q  204 g-----------ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    |           ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42875049 gttgtgaagttgttgtatgttgctgtctctgttatattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 42874950  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  42874949 tgtcgttaaagttgtaagttg 42874929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 16997980 - 16997657
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16997980 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 16997881  T
Q  104 gttgttg---aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgc 200  Q
    |||||||   ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16997880 gttgttgttgaataatttgagttacttatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgc 16997781  T
Q  201 tatg-----------ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgt 289  Q
    ||||           |||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  16997780 tatgttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcacatgttggtcaagttgttaaagttgtaagttgttgt 16997681  T
Q  290 caatgtcgttaaagttgtaagttg 313  Q
    ||||||| ||||||||||||||||    
T  16997680 caatgtcattaaagttgtaagttg 16997657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 11425405 - 11425084
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  11425405 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgtatgtt 11425306  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatag-aaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  11425305 gttgttgaataatttgagttacatatatttatgtggaataggtatgatatagaaaaataatattgttatatcattcatgttgttattattaatgatgcta 11425206  T
Q  203 tgt-----------tgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtca 291  Q
    |||           ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11425205 tgttgtgaagttgatgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtca 11425106  T
Q  292 atgtcgttaaagttgtaagttg 313  Q
    ||||||||||||||||||||||    
T  11425105 atgtcgttaaagttgtaagttg 11425084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 25091103 - 25090783
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  25091103 ggtgtttaagagtatttaaccaatgttgtgatggatctaatttgctttgacgtgaatatctttgttagataatttgaaatacatatattatgtgaatgtt 25091004  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     
T  25091003 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgttat 25090904  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||| ||||| | |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  25090903 gttgtgaagttgttgtgtgttgttttctctactgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcat 25090804  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||| ||||||||||||||||    
T  25090803 tgtcattaaagttgtaagttg 25090783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 14549076 - 14548773
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  14549076 ggtgtttaagagtatttagcctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggagaatttgaaatacatatattatgtgaatgtt 14548977  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  14548976 gttgttgaataatttgagttacatatatgtatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgttat 14548877  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||| ||||||||||||| |    
T  14548876 gttgtgaagttgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatttgttgtttatgttgttaaagttgtaagttgttgtcga 14548777  T
Q  293 tgtc 296  Q
    ||||    
T  14548776 tgtc 14548773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 10357038 - 10357334
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10357038 ggtgtttaagagtatttaacctatgttgtgatggatcttatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 10357137  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||| |||||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  10357138 gttgatgaataatttgagttacatatatttacgtagaaaagatatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgttat 10357237  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
              |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||    
T  10357238 gttgtgaagttgttgtatgttgttgtctttgctgtattgattattaaatcattaagttgcatatgttggtctaagttgtttaagttgtaagatgttg 10357334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 19609774 - 19609570
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| |||| |||||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  19609774 ggtgtttaagagtatttaacctatgttgtgatggacctaatttggtttgacgcgaatatttttgttggataatttgaaatacatatattatgtgaatgtt 19609675  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19609674 gttgttgaataatttgagtgacatatatttatgtggaaaatgtatgatatagaaaataatgttgttaaaccattcaagttgttattattaatgatgctat 19609575  T
Q  204 gttgt 208  Q
    |||||    
T  19609574 gttgt 19609570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 3485361 - 3485091
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| || | ||||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3485361 ggtgtttaagagtatctagcatatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 3485262  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |||||     
T  3485261 gttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttataccatccaagtggttattattaatgttgctat 3485164  T
Q  203 ---------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
             |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3485163 gattcaagttgttgtatgttgttgtctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 3485091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 123 - 313
Target Start/End: Complemental strand, 37018929 - 37018728
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgt-----------atg 211  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||    
T  37018929 tacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatg 37018830  T
Q  212 ttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagt 311  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  37018829 ttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtccagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagt 37018730  T
Q  312 tg 313  Q
    ||    
T  37018729 tg 37018728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 53 - 289
Target Start/End: Complemental strand, 19734687 - 19734447
Alignment:
Q  53 acgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgata 152  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||     
T  19734687 acgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttgaataatttgagatacatata-ttatgtgaatattgtatgat- 19734590  T
Q  153 tagaaaataatgttgttataccattc-aagttgttattattaatgatgcta----------tgttgtatgttgctgtctctgttg-tattgattattaaa 240  Q
          |||||||||||||||||| | |||| ||||||||||||| |||||          |||||||||||| ||||||||||| ||||||||||||||    
T  19734589 ------ataatgttgttataccatccaaagtggttattattaatgttgctatgattcaagttgttgtatgttgttgtctctgttgttattgattattaaa 19734496  T
Q  241 tcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
    ||||||||||||||||| ||||| |||||| | |||| ||||||||||||    
T  19734495 tcattaagttgcatatgatggtcaaagttg-tcaagttgtaagttgttgt 19734447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 95 - 265
Target Start/End: Original strand, 33243949 - 33244129
Alignment:
Q  95 gtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaa 194  Q
    |||||| || ||||||||||||||||| ||||||||||  |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243949 gtgaatatttttgttgaataatttgagatacatatattg-tgtgaataaggtatgatatagaaaataatgttgttataccattcaagttgttattattaa 33244047  T
Q  195 tgatgctatg-----------ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaa 265  Q
    ||||||||||           |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  33244048 tgatgctatgttgtgaagttattgtatgttgatgtctctgctgtattgattattaaatcattaagttgcatatgttagtcaa 33244129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 123 - 289
Target Start/End: Original strand, 19435498 - 19435675
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-----------tgttgtatg 211  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||           |||||||||    
T  19435498 tacatatatttatgtggaaaaggtatgatatagaaaacaatgttgttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatg 19435597  T
Q  212 ttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgt 289  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||  | |||| ||||||||||||    
T  19435598 ttgttgtctctgctgtattgattattaaatcattaagttgcatatgttagtcaaatttgtcaagttgtaagttgttgt 19435675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 14630276 - 14630177
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14630276 ggtgtttaagtgtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 14630177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 53631075 - 53631176
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  53631075 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaatatt 53631174  T
Q  104 gt 105  Q
    ||    
T  53631175 gt 53631176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 13036381 - 13036479
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttg 104  Q
    |||| ||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  13036381 tgtttaagagtatttaacctatattgtgatggatctaatttagtttgacgtgaatatctttgttggataatttaaaatacatatattatgtgaatgttg 13036479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 33243898 - 33243994
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    |||||| |||||||  |||||||||||||| |||||||||||||||||||||||||||| |||||||  |||||||| ||||||||||| |||||||    
T  33243898 ggtgtttaagagtagctaacctatgttgtgatggatctaatttgatttgacgtgaatatttttgttgaataatttgagatacatatattgtgtgaat 33243994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 4615772 - 4615885
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||  ||||    
T  4615772 tgttgttggttaatttgagttacatatatt-atgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgct 4615870  T
Q  202 atgttgtatgttgct 216  Q
    |||||| | ||||||    
T  4615871 atgttgcaagttgct 4615885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 15344327 - 15344260
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  15344327 ggtgtttaagagtatttaacctatgttatgatggatctaatttggtttgacgtgaatatctttgttgg 15344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 19435307 - 19435367
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  19435307 aagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 19435367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 9638169 - 9638080
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  9638169 tgaatgttgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 9638080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 35660295 - 35660233
Alignment:
Q  5 gtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    ||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||    
T  35660295 gtgtttaagagtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttg 35660233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 55582653 - 55582587
Alignment:
Q  5 gtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||| |||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  55582653 gtgtttaagagtatttaatctatgttgtgatggatctaacttgatttgatgtgaatatctttgttgg 55582587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 251
Target Start/End: Original strand, 2584937 - 2585076
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttg---------tatgt 212  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| | || |||||||         |||||    
T  2584937 tacatatatt-atgtggaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgttattattaacgttgttatgttgcaagttgtttatgt 2585035  T
Q  213 tgctgtctctgttg-tattgattattaa-atcattaagttg 251  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  2585036 tgctgtctctgttgttgttgattattaatatcattaagttg 2585076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 3337549 - 3337489
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  3337549 ggtgtttaagagtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatct 3337489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 26922273 - 26922336
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  26922273 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctttg 26922336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 13446778 - 13446685
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||||||| ||||||||||||||||| ||||||||||  |||| ||||| ||||| ||||||||||||||| | |||||||||| | ||||||    
T  13446778 tacatatatt-atgtgaaaaatgtatgagatagaaaatatcgttgtttatatcattcgagttgttattattaacgttgctatgttgcaagttgct 13446685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 37019119 - 37019053
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttg 70  Q
    |||||| |||||||||||||||||| |||| ||||||||| ||| |||||||||||||| |||||||    
T  37019119 ggtgtttaagagtatttaacctatgctgtgatggatctaacttggtttgacgtgaatatttttgttg 37019053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 14933175 - 14933260
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||||||||||||||||||  |||||| | | ||||||||||||||||||||||  |||||||||| | ||||||    
T  14933175 ttatgtggaaaatgtatgatatagaaaatatcgttgtttacatcattcaagttgttattattaatattgctatgttgcaagttgct 14933260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 16026788 - 16026887
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | ||| |||||||| ||||| ||||||| ||| ||||||||||| |||| ||||    
T  16026788 tgaatattgttgttgaataatttgagatacatata-ttatgtgaatattgtgtgatatag-aaatattgttgttcatatcattcaagttgctattgttaa 16026885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 27028053 - 27027968
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||||||||||||||| ||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  27028053 ttatgtggaaaatgtatgatatagaaagtatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 27027968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 21061844 - 21061768
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||| ||||||| |||||||||||||| || |||| ||| ||||||||||||| ||||||||| ||||||||||    
T  21061844 ttatgtggaaaatgtttgatatagaaaatattgatgtttatatcattcaagttgttgttattaatgttgctatgttg 21061768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 14630034 - 14629945
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| | ||| ||||| |||||||||||||    
T  14630034 tgaatattgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattattgtttatatcattcaagttgtt 14629945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 25513193 - 25513126
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||| |||||||||||||||||| | ||||||| ||| ||||| |||||||||||||||||    
T  25513193 ggtgtttaagaatatttaacctatgttgtgatagatctaacttggtttgatgtgaatatctttgttgg 25513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 26445335 - 26445268
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| ||||| ||  ||| |||||||||||||||||| ||||    
T  26445335 ggtgtttaagagtatttaacctatgttgtgatggatatatcttggtttgacgtgaatatctttattgg 26445268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 14508212 - 14508150
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||| || |||||  ||| ||||||||||||||||||    
T  14508212 ggtgtttaagagtatttaacctatgttgtgatgaatctatcttggtttgacgtgaatatcttt 14508150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 19566520 - 19566582
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||| |  |||||| ||| ||||||||||||||||||    
T  19566520 ggtgtttaagagtatttaacctatgttgtgataaatctaacttggtttgacgtgaatatcttt 19566582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 6511900 - 6511820
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctat 203  Q
    |||||||||| ||||  |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||| | ||||||    
T  6511900 tacatatatt-atgtagaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgttattattaacgttgctat 6511820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 14942381 - 14942466
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| |||||||||||| |||||||||  |||||| | | ||||||||||||||||||||||  |||||||||| | ||||||    
T  14942381 ttatgtggaaaatgtatgatctagaaaatatcgttgtttacatcattcaagttgttattattaatattgctatgttgcaagttgct 14942466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 15448145 - 15448230
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||||||||||||||||||  |||| ||||| |||||||||| |||||||||||  | |||||||| | ||||||    
T  15448145 ttatgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagtttttattattaatatttctatgttgcaagttgct 15448230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 9638315 - 9638247
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  9638315 aaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 9638247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 18229974 - 18229899
Alignment:
Q  133 tatgtgaaaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||| ||||||||||| ||||||||||  ||||||| || |||||||||||||| |||||||  ||||||||||    
T  18229974 tatgtggaaaatgtatgagatagaaaatatcgttgttattatcattcaagttgttaatattaatattgctatgttg 18229899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 45314938 - 45315001
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||  | || |||||| ||| |||||||||||||||||||    
T  45314938 ggtgtttaagagtatttaacctatgttaagatgaatctaacttggtttgacgtgaatatctttg 45315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 20899466 - 20899579
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || || ||||||| ||||| |||||||||||||||||||||   |||| ||||| ||||||||||||| ||||||||  || |    
T  20899466 tgttgttggttaatttaagctatatatatt-atgtggaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgtt 20899564  T
Q  202 atgttgtatgttgct 216  Q
    |||||| | ||||||    
T  20899565 atgttgcaagttgct 20899579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 53631136 - 53631216
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  53631136 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 53631216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 16026620 - 16026699
Alignment:
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||| |||||    
T  16026620 tgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaaattgtt 16026699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 50160222 - 50160173
Alignment:
Q  225 tgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaa 273  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  50160222 tgtattgattattaaatcattaaattgcatatgttagtcaaagttgttaa 50160173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 15114666 - 15114614
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatc 63  Q
    |||||||||||||||||||  || ||||||||||||| ||||| |||||||||    
T  15114666 aagagtatttaacctatgtgctgatggatctaatttggtttgatgtgaatatc 15114614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 2425222 - 2425284
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||| || ||| |  ||| ||||| ||||||||||||    
T  2425222 ggtgtttaagagtatttaacctatgttgtgatgaatcaatcttggtttgatgtgaatatcttt 2425284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 45315183 - 45315221
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  45315183 gttaaagttgtaagttgttgtcaatgtcgttgaagttgt 45315221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 9871310 - 9871378
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| || |||||||||||||||| ||| | ||||||||    
T  9871310 aaaatgtatgatatagaaattattattgtttatatcagtcaagttgttattattgatgtttctatgttg 9871378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 51992831 - 51992763
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | ||||| ||| |||||||||||||||| || ||| ||||||||||    
T  51992831 aaaatgtatgatatggaaattattattgtttatatcattcaagttgttattgttgatgttgctatgttg 51992763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 27126079 - 27126399
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27126079 ggtgtttaagagtatttaacctatgttgtgatggatttaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 27126178  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27126179 gttgttgaataatttgagttacataaatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 27126278  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27126279 gttgtgaagttgttgtatgttgctgtctctgatgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 27126378  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||| ||||||||||||||||    
T  27126379 tgtctttaaagttgtaagttg 27126399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 24 - 313
Target Start/End: Original strand, 15891327 - 15891625
Alignment:
Q  24 ctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttgaataatttgagtt 123  Q
    |||||||||| ||||||||||||| ||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15891327 ctatgttgtgatggatctaatttggtttgacgtgaatatcttt--tggataatttgaaatacatatattatgtgaatgttgttgttgaataatttgagtt 15891424  T
Q  124 acatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-----------tgttgtatgt 212  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           ||||||||||    
T  15891425 acatatatttatgtggaaaatgtatgatatagaaaataattttgttataccattcaagttgttattattaatgatgctatgttgtgaagttgttgtatgt 15891524  T
Q  213 tgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagtt 312  Q
    || |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15891525 tgttgtctctgctatattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagtt 15891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 31734158 - 31733863
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  31734158 ggtgtttaagagtatttaacctatgttgtgatagatctaatttggtttgacgtgaatatctttgtaggataattagaaatacatatattatgtgaatgtt 31734059  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||     
T  31734058 gttgttgaataatttgagttacatatatttatgtgaaaaaggtatgatatagaaaataatgttgttataccatttaagttgttattattaatgatgttat 31733959  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttg 288  Q
              |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  31733958 gttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagatgttg 31733863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 17318724 - 17319020
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  17318724 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatatt 17318823  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||| |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17318824 gttcttgaattatttgagttatatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 17318923  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
              |||||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||| |||| ||||| |||||    
T  17318924 gttgtgaagttgttgtatgttgttgtctctgctgtattgattattatatcattaagtagcatatgttggtctaagttgtttaagttgtaagatgttg 17319020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 23150868 - 23151072
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23150868 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 23150967  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  23150968 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttgtaccattcaagttgttattattaattatgctat 23151067  T
Q  204 gttgt 208  Q
    |||||    
T  23151068 gttgt 23151072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 7827422 - 7827234
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  7827422 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataattggaaatacatatattatgtgaatgtt 7827323  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattatt 192  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7827322 gttgttgaataatttgagttacatatatttatgtgaaaaaggtatgatatagaaaataattttgttataccattcaagttgttattatt 7827234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 18708949 - 18708746
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  18708949 ggtgtttaagagtatttaacctatgttgtgatggatctaatttagtttgacatgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 18708850  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18708849 gttgttgaataatttgagttacatatagttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagtt-ttattattaatgatgctat 18708751  T
Q  204 gttgt 208  Q
    |||||    
T  18708750 gttgt 18708746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27318154 - 27318314
Alignment:
Q  1 tatggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  27318154 tatggtgtttaagagtatttaacctacgttgtgatggatctaatttagtttgacgtgaatatctttgttggataatttgaaatacatatattatatgaat 27318253  T
Q  101 gttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaata 161  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  27318254 gttgttgttgaataatttaagttacatatatttatgtggaaaatgtatgatatataaaata 27318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 18703007 - 18702889
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18703007 aagagtatttaacctatgttgtgatggatctaatttagtttgacatgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttg 18702908  T
Q  111 aataatttgagttacatat 129  Q
    |||||||||||||||||||    
T  18702907 aataatttgagttacatat 18702889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 7825886 - 7825776
Alignment:
Q  203 tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgttaaa 302  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  7825886 tgttgtatgttgctgtctctgctgtattgattactaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgttgttaaa 7825787  T
Q  303 gttgtaagttg 313  Q
    |||||||||||    
T  7825786 gttgtaagttg 7825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 28947794 - 28947693
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  28947794 ggtgtttaagagtatttaacctatgttgtgatggacctaatttggtttgacgtgaatatttttgttggataatttgaaatacatatattatgtgaatgtt 28947695  T
Q  104 gt 105  Q
    ||    
T  28947694 gt 28947693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 24441261 - 24441158
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtatgt 212  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||| | ||    
T  24441261 taatttgagttacatatatttatgtggaaaaggtatgatattgaagataatgttgttataccattcaagttgttattattaatattgctatgttgcaagt 24441162  T
Q  213 tgct 216  Q
    ||||    
T  24441161 tgct 24441158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 19655831 - 19655932
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||    
T  19655831 ggtgtttaagagtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataattcgagatacatatattatgtgaatatt 19655930  T
Q  104 gt 105  Q
    ||    
T  19655931 gt 19655932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 23491773 - 23491874
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||    
T  23491773 ggtgtttaagagtatctaacatatgttgtgatggatctaatttggtttgacgtgaatatctttgttgaataatttgagatacatatattatgtgaatatt 23491872  T
Q  104 gt 105  Q
    ||    
T  23491873 gt 23491874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 23497371 - 23497472
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||    
T  23497371 ggtgtttaagagtatctaacatatgttgtgatggatctaatttggtttgacgtgaatatctttgttgaataatttgagatacatatattatgtgaatatt 23497470  T
Q  104 gt 105  Q
    ||    
T  23497471 gt 23497472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 19773318 - 19773412
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||| |||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  19773318 aagagtatttaacatgtgttgtgatggatctaatttgattggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 19773412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 23655759 - 23655665
Alignment:
Q  73 taatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    |||||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  23655759 taatttaaaatacatatattatatgaatgttgttgttgaatattttgaggtacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 23655665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 15705220 - 15705314
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||| ||||||||||||| || ||||||||||| |||||||  |||||||| ||||||||||||||||||| ||||    
T  15705220 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatttttgttgaataatttgagatacatatattatgtgaatattgt 15705314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 22212214 - 22212303
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattatt 192  Q
    ||||||||  ||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  22212214 tgttgttggttaatttgagatacatatatt-atgtgaaaattgtatgatatagaaaataattttgtttatatcattcaagttgttattatt 22212303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 289
Target Start/End: Original strand, 31735629 - 31735827
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  ||||||||  |||||||||| ||||| ||||||| |||||||||||||| ||||||| ||| ||||||| ||||||||||||||| ||||    
T  31735629 tgttgttggttaatttgaaatacatatatt-atgtggaaaatgtttgatatagaaaatattgttgtttatatcattcaaattgttattattaatgttgct 31735727  T
Q  202 a----------tgttgtatgttgctgtctctgttg-tattgattattaa-atcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
    |          |||| |||||||||||||||| || | ||||||||||| ||||||||||||||  |||||||| ||||||  ||||| |||||||||||    
T  31735728 atgttacaagttgttttatgttgctgtctctgctgttgttgattattaatatcattaagttgcaagtgttggtctaagttg-caaagttgtaagttgttg 31735826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 27322172 - 27322224
Alignment:
Q  156 aaaataatgttgttataccattcaagttgttattattaatgatgctatgttgt 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27322172 aaaataatgttgttataccattcaagttgttgttattaatgatgctatgttgt 27322224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 13285159 - 13285094
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgtt 69  Q
    |||||| ||||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||    
T  13285159 ggtgtttaagagtatttaacctatattgtgatggatctaacttggtttgacgtgaatatctttgtt 13285094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 22806271 - 22806182
Alignment:
Q  16 tatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||| | ||| ||| ||||||||||||| || |||||||||||||||||||  |||||| | ||||||||||||||||||| ||||    
T  22806271 tatttaacatgtgtggtgatggatctaatttggttggacgtgaatatctttgttgaataatttaagatacatatattatgtgaatattgt 22806182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 18658524 - 18658448
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||| ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||  ||||||||||    
T  18658524 ttatgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttg 18658448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 23497613 - 23497702
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||||| |||| | ||||||| ||| |||||||||||||    
T  23497613 tgaatgttgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatata-aaaagagtgttgttcatatcattcaagttgtt 23497702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 23655799 - 23655740
Alignment:
Q  73 taatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatt 132  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||    
T  23655799 taatttgaaatacatatattatatgaatgttgttgttgaataatttaaaatacatatatt 23655740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 13751060 - 13751173
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || || ||||||| ||||| ||||||||||||||||||||||  |||||| ||  ||||||||||||||||||||||  ||||    
T  13751060 tgttgttggttaatttaagctatatatatt-atgtggaaaatgtatgatatagaaaatatcgttgtttatttcattcaagttgttattattaatattgct 13751158  T
Q  202 atgttgtatgttgct 216  Q
    |||||| | ||||||    
T  13751159 atgttgcaagttgct 13751173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 16245416 - 16245370
Alignment:
Q  213 tgctgtctctgttgtattgattattaaatcattaagttgcatatgtt 259  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16245416 tgctgtctctgctgtattgattattaaatcattaagttgcatatgtt 16245370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 611050 - 610973
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  611050 aaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 610973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 19444016 - 19444101
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||||||||||||||||||  |||| ||||| ||||||||||||| ||||||||  |||||||||| | ||||||    
T  19444016 ttatgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttgct 19444101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 29848247 - 29848324
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  29848247 aaaatgtgtgatatagaaaatattgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 29848324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22556692 - 22556632
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||| |||||||||||||||||||    
T  22556692 aagagtatttaacctattttgtgatggatctaacttggtttaacgtgaatatctttgttgg 22556632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 19234647 - 19234584
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| || |||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  19234647 ggtgtttaaaagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctttg 19234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 23492015 - 23492104
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | ||||||||||| |||| | ||||||| ||| |||||||||||||    
T  23492015 tgaattttgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatata-aaaagagtgttgttcatatcattcaagttgtt 23492104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 25921180 - 25921117
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || | |||| ||| |||||||||||||||||||    
T  25921180 ggtgtttaagagtatttaacctatgttgtgatgaaactaacttggtttgacgtgaatatctttg 25921117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 29044712 - 29044650
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| |||||||| |||||||||||||| || |||||| ||| ||||||||||||||||||    
T  29044712 ggtgtttaagagtatataacctatgttgtgatgaatctaacttggtttgacgtgaatatcttt 29044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 32259291 - 32259233
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgtt 69  Q
    ||||||||||||||||||||||| || |||||| ||| |||||||||||||||| ||||    
T  32259291 aagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctctgtt 32259233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 16133406 - 16133482
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||| |||||||||||||||||||||   |||| ||||| ||||||||||||| ||||||||  ||||||||||    
T  16133406 ttatgtggaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttg 16133482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 19773372 - 19773434
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  19773372 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 19773434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 13764659 - 13764592
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||  ||||||||||    
T  13764659 aaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttg 13764592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 18585070 - 18585007
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| || ||||||||||||| |||||| || |||||| ||| |||||||||||||||||||    
T  18585070 ggtgtttaaaagtatttaacctaagttgtgatgaatctaacttggtttgacgtgaatatctttg 18585007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 23500979 - 23500890
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||| ||||||||| |||||||||| ||| |||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  23500979 tgaatattgttgttggataatttgagatacttatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 23500890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 15705264 - 15705336
Alignment:
Q  95 gtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    |||||| || ||||||||||||||||| |||||||| ||||||||| | ||||||||||| |||||| |||||||    
T  15705264 gtgaatatttttgttgaataatttgagatacatata-ttatgtgaatattgtatgatata-aaaatattgttgtt 15705336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 23491834 - 23491886
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaa 158  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||||||    
T  23491834 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 23491886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 23497432 - 23497484
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaa 158  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||||||    
T  23497432 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 23497484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 19829696 - 19829764
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||| ||||||| ||| ||||||||||    
T  19829696 aaaatgtatgatatagaaattattattgtttatatcattcaagttgatattattgatgttgctatgttg 19829764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 22806222 - 22806160
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    |||||||||||||| || |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  22806222 ttgttgaataatttaagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 22806160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 24267111 - 24266952
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || || ||||||| ||||||||||||||||||||| |||||    ||| ||||| ||||||||||||| ||||||||  || |    
T  24267111 tgttgttggttaatttaagctatatatatt-atgtgaaaaatgtatgatataaaaaatgtccttgtttatatcattcaagttgttgttattaatattgtt 24267013  T
Q  202 atgttg---------tatgttgctgtctctgttg-tattgattattaa-atcattaagttg 251  Q
    ||||||         ||||||||||||||||||| | ||||||||||| ||||||||||||    
T  24267012 atgttgcaagttgcttatgttgctgtctctgttgttgttgattattaatatcattaagttg 24266952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 25920834 - 25920790
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    ||||||||  |||||||| ||||||||||||||||||||||||||    
T  25920834 gttaaagttataagttgtggtcaatgtcgttaaagttgtaagttg 25920790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 19655892 - 19655972
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||| ||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  19655892 ttgttggataattcgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 19655972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Complemental strand, 23655673 - 23655639
Alignment:
Q  98 aatgttgttgttgaataatttgagttacatatatt 132  Q
    |||||||||||||||||||||||| ||||||||||    
T  23655673 aatgttgttgttgaataatttgaggtacatatatt 23655639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 7825795 - 7825754
Alignment:
Q  266 gttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  7825795 gttgttaaagttgtaagttgttgtcgatgtcgttgaagttgt 7825754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 19234518 - 19234477
Alignment:
Q  266 gttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  19234518 gttgttaaagttgtaagttgttgtcgatgtcgttgaagttgt 19234477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 31735631 - 31735663
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtg 97  Q
    ||||||| |||||||||||||||||||||||||    
T  31735631 ttgttggttaatttgaaatacatatattatgtg 31735663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 99)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 2842064 - 2842374
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  2842064 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatatgaaatacatatattatgtgaatgtt 2842163  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  2842164 gttgttgaataatttgtgttacacatatttatgtggaaaaggtatgatatagaaaataatgttgttatatcattcaagtttttattattaatgatgctat 2842263  T
Q  204 gttgt-atgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgttaaa 302  Q
    ||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2842264 gttgtgaagttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtccatgtcgttaaa 2842363  T
Q  303 gttgtaagttg 313  Q
    |||||||||||    
T  2842364 gttgtaagttg 2842374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 11258917 - 11258597
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11258917 ggtgtttaagagtatttaacctatgttgtgatagatataatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 11258818  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11258817 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgttat 11258718  T
Q  204 gtt-----------gtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    |||           |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11258717 gttgtgaagttgtagtatgttgatgtttctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 11258618  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  11258617 tgtcgttaaagttgtaagttg 11258597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 35065182 - 35065502
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35065182 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 35065281  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  35065282 gttgttgaacaatttgagttacatatatttatgtggaaaaagtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctat 35065381  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35065382 gttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 35065481  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    ||||||||||||| |||||||    
T  35065482 tgtcgttaaagttataagttg 35065502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 4 - 310
Target Start/End: Original strand, 17519475 - 17519793
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17519475 ggtgtttaagagtatttaacatatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 17519574  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||     
T  17519575 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgtggtcataccattcaagttgttattattaatgatgttat 17519674  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattga-ttattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtca 291  Q
              ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||    
T  17519675 attgtgaagttgttgtatgttgctgtctctgctgtattgatttattaaatcattaagttgcatatgttggtgaagttgttaaagttgtaagttgttttca 17519774  T
Q  292 atgtcgttaaagttgtaag 310  Q
    |||||||||||||||||||    
T  17519775 atgtcgttaaagttgtaag 17519793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 4 - 310
Target Start/End: Original strand, 17534337 - 17534655
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17534337 ggtgtttaagagtatttaacatatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 17534436  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||     
T  17534437 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgtggtcataccattcaagttgttattattaatgatgttat 17534536  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattga-ttattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtca 291  Q
              ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||    
T  17534537 attgtgaagttgttgtatgttgctgtctctgctgtattgatttattaaatcattaagttgcatatgttggtgaagttgttaaagttgtaagttgttttca 17534636  T
Q  292 atgtcgttaaagttgtaag 310  Q
    |||||||||||||||||||    
T  17534637 atgtcgttaaagttgtaag 17534655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 313
Target Start/End: Complemental strand, 35354042 - 35353729
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35354042 aagagtatttaacctatgttgtgatggatctaatttagtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttg 35353943  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatg------ 204  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| || ||||||||||||||||| ||||||||          
T  35353942 aataattttagttacatatatttatgtggaaaatgtatgttatagaaaataatgttgttataccttttaagttgttattattaattatgctatgttgtga 35353843  T
Q  205 -----ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgtt 299  Q
         |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  35353842 agttgttgtatgttgttgtctctgttgtatttattattaaatcattaagttgtatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgtt 35353743  T
Q  300 aaagttgtaagttg 313  Q
    ||||||||||||||    
T  35353742 aaagttgtaagttg 35353729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 5206253 - 5206535
Alignment:
Q  1 tatggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    ||||||||| |||| |||||||||||||||||| || |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5206253 tatggtgtttaagattatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaat 5206352  T
Q  101 gttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgc 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5206353 gttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgc 5206452  T
Q  201 ta-----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgtt 271  Q
    ||           |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  5206453 tatgttgtgaaattgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatattggtctaagttgtt 5206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 11 - 288
Target Start/End: Original strand, 41172980 - 41173269
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41172980 aagagtatttaacctatgttgtgatggatgtaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttg 41173079  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-------- 202  Q
    || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||            
T  41173080 aagaatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctatgttgtga 41173179  T
Q  203 ---tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
       |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||    
T  41173180 agttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtctaagttgtttaagttgtaagatgttg 41173269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 15932109 - 15932404
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15932109 ggtgtttaagagtatttcatctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 15932208  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15932209 gttgttgaataatttgagttacatatgtttatgtggaaattgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 15932308  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttg 288  Q
              ||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||| |||||    
T  15932309 gttgtgaagttgttgtatgctgctgtctctactgtattgattattaaatcattaagttgtatatgttggtcaagttgtttaaattgtaagatgttg 15932404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 14508298 - 14508006
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  14508298 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatttattatgtgaatgtt 14508199  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||   |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14508198 gttg---aataatttgagttacatatatttatgtggaaaaggtattatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 14508102  T
Q  204 g-----------ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttg 288  Q
    |           |||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  14508101 gttgtgaagttgttgtatgtttttgtcttttttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagatgttg 14508006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 287
Target Start/End: Complemental strand, 17693518 - 17693231
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17693518 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 17693419  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17693418 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgatataccattcaagttgttattattaatgatgctat 17693319  T
Q  204 gttgt-atgttgctgtct-ctgttgt-attgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgtt 287  Q
    ||||| | |||| ||| |  || |||  ||||||||||||| ||||||| ||||||||||||| |||||||| |||| ||||| ||||    
T  17693318 gttgtgaagttgttgtatgttgatgtctttgattattaaattattaagtagcatatgttggtctaagttgtttaagttgtaagatgtt 17693231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 44273917 - 44273720
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44273917 aagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttg 44273818  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgt 208  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44273817 aataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgt 44273720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 22307185 - 22307389
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22307185 ggtgtttaagagtatttaacttatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 22307284  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22307285 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 22307384  T
Q  204 gttgt 208  Q
    |||||    
T  22307385 gttgt 22307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 40807446 - 40807242
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40807446 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 40807347  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  40807346 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattaaagttattattattaatgatgctat 40807247  T
Q  204 gttgt 208  Q
    |||||    
T  40807246 gttgt 40807242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 17538557 - 17538353
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17538557 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 17538458  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17538457 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattaaagttgttattattaatgaagctat 17538358  T
Q  204 gttgt 208  Q
    |||||    
T  17538357 gttgt 17538353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 105 - 313
Target Start/End: Original strand, 19884226 - 19884445
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatg 204  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  19884226 ttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgtttttataccattcaagttgttattattaatgatgttatg 19884325  T
Q  205 tt-----------gtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaat 293  Q
    ||           |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19884326 ttatggagttgttgtatgttgatgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaat 19884425  T
Q  294 gtcgttaaagttgtaagttg 313  Q
    ||||| |||||| |||||||    
T  19884426 gtcgtcaaagttttaagttg 19884445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 42353283 - 42353463
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||| ||||||||| ||||||||||  | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42353283 aagagtatttaacgtatgttgtgatggatctaatggg-tttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttg 42353381  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaa 194  Q
    ||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  42353382 aataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttataccatccaagtggttattattaa 42353463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 13519725 - 13519549
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  13519725 aagagtatttaacctatgttgtgatggatctaattgg-tttgacgtgaatatctttgttggcgaatttgaaatacatatattatatgaatgttgttgttg 13519627  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttatta 190  Q
    ||||||||||| |||||||| ||||||||| |  ||||||||||| |||||||||||||||||||| ||||| |||||||    
T  13519626 aataatttgaggtacatata-ttatgtgaatatcgtatgatatag-aaataatgttgttataccatccaagtggttatta 13519549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 16728624 - 16728437
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta---------- 202  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||              
T  16728624 taatttgagttacatatatttatgtggaaaatgtatgatatagaaaacaatgttgttataccattcaagttgttattattaatgatgatatgttgtgaag 16728525  T
Q  203 -tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgt 289  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |  | |||| ||||||||||||    
T  16728524 ttgttgtatgttgttgtctctgttgtattgattattaaatcattaagttgcatatgttagtcaaggttgtcaagttgtaagttgttgt 16728437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 102 - 265
Target Start/End: Original strand, 50348806 - 50348977
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgct 201  Q
    |||||||||  |||| |||  ||||| |||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  50348806 ttgttgttggttaatgtgaaatacatgtatttatgtggaaaaggtatgatatagaaaataatattgttataccattcaagttgttattattaatgatgct 50348905  T
Q  202 at--------gttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaa 265  Q
    ||        |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  50348906 atgttgtgaagttgtatgttgctgtctctgctgtattgattattaaatcattaagttgcatatgttagtcaa 50348977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 44269768 - 44269659
Alignment:
Q  204 gttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgttaaag 303  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44269768 gttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaag 44269669  T
Q  304 ttgtaagttg 313  Q
    ||||||||||    
T  44269668 ttgtaagttg 44269659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 123 - 289
Target Start/End: Original strand, 14153191 - 14153368
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-----------tgttgtatg 211  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||           |||||||||    
T  14153191 tacatatatttatgtggaaaaggtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctatgttgtgaagttgttgtatg 14153290  T
Q  212 ttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
    || ||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||| | |||| ||||||||||||    
T  14153291 ttactgtctctgatgtattcattattaaatcattaagttgcatatgttagtcaaagttg-tcaagttgtaagttgttgt 14153368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 113 - 289
Target Start/End: Original strand, 45531332 - 45531520
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta---------- 202  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||              
T  45531332 taatttgagttacatatatttatgtggaaaatgtatgatataaaagataatgttgttataccattcaagttgttattattaatgatgttatgttgtgaag 45531431  T
Q  203 -tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
     |||||||||||  |||||||| || ||||||||||| |||||||||||||||||||| |||| |||||| | ||||||||||| |||||    
T  45531432 ttgttgtatgttattgtctctgctgttattgattatttaatcattaagttgcatatgtaggtcaaagttg-tcaagtcgtaagtagttgt 45531520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 160 - 288
Target Start/End: Complemental strand, 5215159 - 5215020
Alignment:
Q  160 taatgttgttataccattcaagttgttattattaatgatgctatgttgt-----------atgttgctgtctctgttgtattgattattaaatcattaag 248  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||           |||||| |||||||| ||||||||||||||||||||||||    
T  5215159 taatgttgttataccattcaagttgttattatttatgatgctatgttgtgaaattgttgtatgttgttgtctctgctgtattgattattaaatcattaag 5215060  T
Q  249 ttgcatatgttggtcaagttgttaaagtcgtaagttgttg 288  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  5215059 ttgcatatgttggtcaagttgttaaagttgtaagatgttg 5215020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9511774 - 9511863
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9511774 aagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaat 9511863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 9519749 - 9519838
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9519749 aagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaat 9519838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 17046612 - 17046511
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  17046612 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaatatt 17046513  T
Q  104 gt 105  Q
    ||    
T  17046512 gt 17046511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 54876085 - 54876186
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  54876085 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaatatt 54876184  T
Q  104 gt 105  Q
    ||    
T  54876185 gt 54876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 11192531 - 11192430
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||    
T  11192531 ggtgtttaagagtatttaacctatgttgtgatggacctaatttggtttgacgtgaatatctttgttggataatttgagatacatttattatgtgaatatt 11192432  T
Q  104 gt 105  Q
    ||    
T  11192431 gt 11192430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 17685445 - 17685546
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||    
T  17685445 ggtgtttaagagtatttaatctatcttgtgatggatctaatttggtttgacgtgaatatctttgttggataattagaaatacatatattatgtgaatatt 17685544  T
Q  104 gt 105  Q
    ||    
T  17685545 gt 17685546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 6156156 - 6156055
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||  |||||||| |||||||| |||||||||| ||    
T  6156156 ggtgtttaagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgaataatttgagatacatatgttatgtgaatatt 6156057  T
Q  104 gt 105  Q
    ||    
T  6156056 gt 6156055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 14441618 - 14441517
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||   |||||||| |||||||| ||||||||||||||||||| ||    
T  14441618 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaattagtttgttggataatttgagatacatatattatgtgaatatt 14441519  T
Q  104 gt 105  Q
    ||    
T  14441518 gt 14441517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 19568970 - 19569072
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatct-aatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgt 102  Q
    |||||| ||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||| |    
T  19568970 ggtgtttaagagtatttaacctatgttgtgatggaccttaatttggtttgacgtgaatatctttgttgaataatttgagatacatatattatgtgaatat 19569069  T
Q  103 tgt 105  Q
    |||    
T  19569070 tgt 19569072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 17691427 - 17691508
Alignment:
Q  24 ctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  17691427 ctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgatatacatatattatgtgaatattgt 17691508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 40811986 - 40811919
Alignment:
Q  243 attaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaag 310  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40811986 attaagttgtatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaag 40811919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 18700082 - 18700176
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  18700082 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 18700176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 12470245 - 12470151
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||| | ||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  12470245 aagagtatttaacatgtgttgtgattgatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 12470151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 13179488 - 13179399
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattat 191  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  13179488 ttgttgttggttaatttgagctacatatatt-atgtgaaaaatgtatgatatagaaaatattgttgttcatatcattcaagttgttattat 13179399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 43889408 - 43889502
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||  ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  43889408 aagagtatttaacatgtgttgtcatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 43889502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 14671264 - 14671173
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| |  |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  14671264 agtatttaacatgtgttgtgatggatctaatttggtcggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 14671173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 14682763 - 14682672
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| |  |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  14682763 agtatttaacatgtgttgtgatggatctaatttggtcggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 14682672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 15565964 - 15565897
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  15565964 ggtgtttaagagtatttaacctatgttgtgttggatctaacttggtttgacgtaaatatctttgttgg 15565897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 24546287 - 24546220
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  24546287 ggtgtttaagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 24546220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 50755983 - 50756050
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  50755983 ggtgtttaagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 50756050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 14153008 - 14153068
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  14153008 aagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 14153068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 17207792 - 17207725
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||    
T  17207792 ggtgtttaagagtatttaacctatgttttgatggatctaacttggtttgacgtgaatatctttgttgg 17207725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 289
Target Start/End: Complemental strand, 20417424 - 20417227
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  ||||||||| |||||||||| ||||| ||||||||||||||| || ||| ||||||| ||| ||||||||||||||||||||||  || |    
T  20417424 tgttgttggttaatttgagctacatatatt-atgtggaaaatgtatgatataaaagatattgttgtttatatcattcaagttgttattattaatattgat 20417326  T
Q  202 atgttg---------tatgttgctgtctctgttg-tattgattattaa-atcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
    ||||||         ||||||| |||||||| || | ||||||||||| ||||||||||||||  |||||||| ||||||  ||||| ||||||||||||    
T  20417325 atgttgcaagttgtttatgttgttgtctctgctgttgttgattattaatatcattaagttgcaagtgttggtctaagttg-caaagttgtaagttgttgt 20417227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 54330907 - 54330970
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || |||||| |||||||||||||||||||||||    
T  54330907 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttgatttgacgtgaatatctttg 54330970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 3394736 - 3394821
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  3394736 ttatgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 3394821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 50348635 - 50348695
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||    
T  50348635 aagagtatttaacctatgttttgatggatctaacttggtttgacgtgaatatctttgttgg 50348695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 50351602 - 50351665
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||| ||||||||  ||||||||||||| |||||||||||||||||||    
T  50351602 ggtgtttaagagtatttaacatatgttgttatggatctaatttggtttgacgtgaatatctttg 50351665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 10550587 - 10550501
Alignment:
Q  131 tttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||||| ||||||||||||||||||| ||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  10550587 tttatgtggaaaatgtatgatatagaaattatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 10550501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 14818370 - 14818278
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaat 195  Q
    ||||||||  |||||| || || ||||||| ||||| ||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||    
T  14818370 tgttgttggttaatttaagctatatatatt-atgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaat 14818278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 11258613 - 11258569
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  11258613 gttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttg 11258569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 13523153 - 13523221
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||  ||||||||||    
T  13523153 aaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttg 13523221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 23395786 - 23395857
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaa 194  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  23395786 tacatatatt-atgtggaaaatgtatgatatagaaaatattgttgtttatatcattcgagttgttattattaa 23395857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 6155986 - 6155897
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||  ||||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  6155986 tgaatattgttgttgaataatttgagatacatat-gttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 6155897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 10563018 - 10562881
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgt-----------atgttgctgtctctgttgt 227  Q
    ||||||||||||||| ||| || | ||||| ||| | |||||||||||||| ||||||||||||||||||           |||||| | |||||| |||    
T  10563018 aaaatgtatgatataaaaattattattgtttatatcgttcaagttgttatttttaatgatgctatgttgtgaagttgttgtatgttgttatctctgctgt 10562919  T
Q  228 attgattattaaatcattaagttgcatatgttggtcaa 265  Q
    |||||| |||||||||||||||| |||||||| |||||    
T  10562918 attgatgattaaatcattaagtttcatatgttagtcaa 10562881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 11192289 - 11192200
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| | ||||| ||| |||||||||||||    
T  11192289 tgaatattgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattattgttcatatcattcaagttgtt 11192200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 179441 - 179526
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||| ||||||||||||||  ||||||| || |||||||||||||| |||||||  |||||||||| | ||||||    
T  179441 ttatgtgcaaaatgtttgatatagaaaatatcgttgttattatcattcaagttgttactattaatattgctatgttgcaagttgct 179526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 11562777 - 11562678
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||| |||||||||||||||| ||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||| ||||| || ||||    
T  11562777 tgaatattgttgttgaataattagagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaaattgttgttgttaa 11562680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 13520523 - 13520600
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  |||||| ||| ||||||| ||||||||||||||  |||||||||| | ||||||    
T  13520523 aaaatgtatgatatagaaaatatcgttgtttatatcattcaaattgttattattaatattgctatgttgcaagttgct 13520600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 17548285 - 17548370
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| |||||||||||||||||||| |  |||||| ||| ||||||||||||| ||||||||  |||||||||| | ||||||    
T  17548285 ttatgtggaaaatgtatgatatagaaaaaatcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttgct 17548370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 18367492 - 18367577
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| |||||||||||||| |||||||  |||||| ||| ||||||||||||||||||||||  || ||||||| | ||||||    
T  18367492 ttatgtggaaaatgtatgatattgaaaatatcgttgtttatatcattcaagttgttattattaatattgttatgttgcaagttgct 18367577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 1208848 - 1208892
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  1208848 gttaaagttgtaagttggtgtcaatgtcgttaaagttgtaagttg 1208892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 6158705 - 6158637
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  6158705 aaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 6158637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 6819427 - 6819367
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattat 191  Q
    ||||||| ||||||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  6819427 ttatgtggaaaatgtatgatatagaaaatatcgttgttattatcattcaagttgttattat 6819367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 10542070 - 10542142
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaataca 86  Q
    |||||||||| | ||||||| ||||||||| ||| || |||||||||||||||||||  |||||||| |||||    
T  10542070 agtatttaacatgtgttgtgatggatctaacttggttggacgtgaatatctttgttgaataatttgagataca 10542142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 14642294 - 14642362
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  14642294 aaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 14642362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 40812276 - 40812216
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||| ||| || |||||||||| ||||| ||||||||| |||||||    
T  40812276 aagagtatttaacctatgtggtgatgtatctaatttggtttgatgtgaatatccttgttgg 40812216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 49900171 - 49900111
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| | ||||||| |||||||    
T  49900171 aagagtatttaacctatgtggtgatggatctaatttggtttgatgcgaatatccttgttgg 49900111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 12511291 - 12511232
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttg 70  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||||| ||||||||||    
T  12511291 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaagatctttgttg 12511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 19569032 - 19569109
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagtt 183  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||    
T  19569032 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagtt 19569109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 54876146 - 54876235
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaat 195  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || |||||    
T  54876146 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaat 54876235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 14568661 - 14568723
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| |||||||| |||||||||||||| || |||||  ||| ||||||||||||||||||    
T  14568661 ggtgtttaagagtatctaacctatgttgtgatgaatctatcttggtttgacgtgaatatcttt 14568723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 17046551 - 17046471
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  17046551 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 17046471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 207
Target Start/End: Original strand, 52338671 - 52338775
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgtt-gttataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || || ||||||| ||||| |||||||||||||||||||||   |||  ||||| ||||||||||||| ||||||||  ||||    
T  52338671 tgttgttggttaatttaagctatatatatt-atgtggaaaatgtatgatatagaaaatgtcgttatttatatcattcaagttgttgttattaatattgct 52338769  T
Q  202 atgttg 207  Q
    ||||||    
T  52338770 atgttg 52338775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 6156095 - 6156005
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatg 196  Q
    ||||||||||||||||| |||||||  ||||||||| | |||||||||||| ||||  ||||||| ||| ||||||||||||| || ||||||    
T  6156095 ttgttgaataatttgagatacatat-gttatgtgaatattgtatgatatag-aaatgttgttgttcatatcattcaagttgttgttgttaatg 6156005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 12470191 - 12470129
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| | |||||||||||    
T  12470191 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-atataatgttgtt 12470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 14250862 - 14250927
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | ||||||||  |||||||||||||||||| ||| ||||||||||    
T  14250862 aaaatgtatgatatggaaattattattgttata--attcaagttgttattattgatgttgctatgttg 14250927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 14671213 - 14671151
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| | |||||||||||    
T  14671213 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-acataatgttgtt 14671151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 14682712 - 14682650
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| | |||||||||||    
T  14682712 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-acataatgttgtt 14682650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 17937971 - 17937935
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttg 47  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17937971 aagagtatttaacctaggttgtgttggatctaatttg 17937935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 18700136 - 18700187
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaa 157  Q
    ||||||||||||||||| |||||||| ||||||||| | ||||||||||||||    
T  18700136 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatagaa 18700187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 37038126 - 37038058
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||| ||||||||||| ||| ||||||||||    
T  37038126 aaaatgtatgatatagaaattattattgtttatatcattcaaattgttattattgatgttgctatgttg 37038058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 42324965 - 42325033
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  42324965 aaaatgtatgatatggaaattattattgtttatatcattcaagttgttattattcatgttgctatgttg 42325033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 17691468 - 17691557
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaat 195  Q
    |||||| |||||||||  |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || |||||    
T  17691468 ttgttggataatttgatatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaat 17691557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 168
Target Start/End: Original strand, 43889462 - 43889523
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgt 168  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||| ||| ||||||||||||    
T  43889462 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatttag-aaataatgttgt 43889523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 11192470 - 11192390
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| ||||| |||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  11192470 ttgttggataatttgagatacatttatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 11192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 13516576 - 13516530
Alignment:
Q  205 ttgtatgttgctgtctctgttgt-attgattattaaatcattaagtt 250  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  13516576 ttgtatgttgctgtctctgctgttattggttattaaatcattaagtt 13516530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 14441557 - 14441477
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||  |||||||||||||    
T  14441557 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatgtcattcaagttgtt 14441477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 313
Target Start/End: Original strand, 50351991 - 50352025
Alignment:
Q  279 taagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||||||| ||||||||||||||||||||||    
T  50351991 taagttgttgtccatgtcgttaaagttgtaagttg 50352025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 52213183 - 52213272
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattatt 192  Q
    ||||||||  |||||| ||||  ||||||| ||||| ||||||||| ||||||||||||  |||| ||||| ||||||| |||||||||||    
T  52213183 tgttgttggttaatttaagttgtatatatt-atgtggaaaatgtattatatagaaaatatcgttgtttatatcattcaaattgttattatt 52213272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 12540485 - 12540444
Alignment:
Q  266 gttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    ||||||||||| |||||||||||||||||| ||| |||||||    
T  12540485 gttgttaaagttgtaagttgttgtcaatgttgttgaagttgt 12540444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 43928794 - 43928741
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    ||||||||||||| |||||| || || |||| ||||| ||||||||||||||||    
T  43928794 aagagtatttaacatatgttctgatgaatcttatttggtttgacgtgaatatct 43928741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 11562971 - 11562927
Alignment:
Q  56 tgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    |||||||  |||||| ||||||||| |||||||||||||||||||    
T  11562971 tgaatattgttgttgactaatttgagatacatatattatgtgaat 11562927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 16050172 - 16050114
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagtt 183  Q
    |||||||||| ||||| ||| ||||||||||||||| | ||||||||||| ||||||||||    
T  16050172 tacatatatt-atgtggaaagtgtatgatatagaaa-tgatgttgttatatcattcaagtt 16050114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 16059555 - 16059489
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattat 191  Q
    |||||||||| ||||| ||| |||||||||||| |||| ||||||||| | |||||||||| |||||||    
T  16059555 tacatatatt-atgtggaaagtgtatgatatag-aaatgatgttgttaaatcattcaagttattattat 16059489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 35353745 - 35353701
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||| |||||||||| || |||||||| |||||||||||||    
T  35353745 gttaaagttgtaagttgttatcgatgtcgttgaagttgtaagttg 35353701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 23 - 343
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  23 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgttaatatctttgttggataatttgaaatacatatattatgtgaatgtt 122  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  123 gttgttgaataatttgagttacatataattttgtggaaaatgtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctat 222  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  223 gttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 322  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  323 tgtcgttaaagttgtaagttg 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 42912500 - 42912180
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||  ||||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42912500 ggtgtttaagagtatttaatatatgttgtgattgatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 42912401  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42912400 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 42912301  T
Q  204 g-----------ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    |           |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42912300 gttgtgaagttgttgtatgttgctgtctttgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 42912201  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||| ||||||||||||||||    
T  42912200 tgtcattaaagttgtaagttg 42912180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 11 - 313
Target Start/End: Original strand, 4596454 - 4596767
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  4596454 aagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatattgttgttg 4596553  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-------- 202  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||            
T  4596554 aataatttgagttacatatatttatgtggaaaaggtatgatatagaaactaatgttgttataccattcaagttgttattattaatgatgctatgttgtga 4596653  T
Q  203 ---tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgtt 299  Q
       |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| |||||    
T  4596654 aattgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttgatcgagttgttaaagttgtaagttgttgtcaatttcgtt 4596753  T
Q  300 aaagttgtaagttg 313  Q
    ||||||||||||||    
T  4596754 aaagttgtaagttg 4596767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 16058916 - 16059236
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16058916 ggtgtttaagattatttaagctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 16059015  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16059016 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 16059115  T
Q  204 gt-----------tgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    ||           |||||||   |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16059116 gttgtgaagttggtgtatgtgtttgtctctactgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 16059215  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    ||| |||||||||||||||||    
T  16059216 tgtagttaaagttgtaagttg 16059236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 21046651 - 21046971
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||| ||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  21046651 ggtgtttaagtgtatttaacctatgttgtgatggatataatttggtttgatgtgaatatctttgttagataatttgaaatacatatattatgtgaatgtt 21046750  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  21046751 gttgttgaataatttgagttacatatatctatgtggaaaaggtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctat 21046850  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21046851 gttgtgaagttgttgtatgttgttgtctcttctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 21046950  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  21046951 tgtcgttaaagttgtaagttg 21046971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 263
Target Start/End: Original strand, 20634244 - 20634507
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||     
T  20634244 aagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatgcatatattatgtgaatgttgttgtta 20634343  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-------- 202  Q
    |||||||||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||            
T  20634344 aataatttgagttacatatatttatgtggaaaaggcatgatataaaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtga 20634443  T
Q  203 ---tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc 263  Q
       ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20634444 agttgttgtatgttgctgtctctgctgtattgattattaaatcattaagttgcatatgttggtc 20634507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 20588129 - 20587832
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  20588129 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaagacatatattatgtgaatgtt 20588030  T
Q  104 gttgttgaat-aatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  20588029 gttgttgaataaatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatacta 20587930  T
Q  203 -----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
               ||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||| |||  ||||| |||||    
T  20587929 tgttgtgaagttgttgtatgttgctgtctctgctatattgattattaaatcattaagttacatatgttggtctaagttgtttaagctgtaagatgttg 20587832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 20592667 - 20592370
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  20592667 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaagacatatattatgtgaatgtt 20592568  T
Q  104 gttgttgaat-aatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  20592567 gttgttgaataaatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatacta 20592468  T
Q  203 -----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
               ||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||| |||  ||||| |||||    
T  20592467 tgttgtgaagttgttgtatgttgctgtctctgctatattgattattaaatcattaagttacatatgttggtctaagttgtttaagctgtaagatgttg 20592370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 6 - 208
Target Start/End: Original strand, 41227308 - 41227510
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  41227308 tgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgatggataatttgaaatacatatattatgtgaatgttgt 41227407  T
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgt 205  Q
    ||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  41227408 tgttgaataatttgagttacatacaattatgtggaaaaggtatgatatagaaaataatgttgttataccattcaatttgttatcattaatgatgctatgt 41227507  T
Q  206 tgt 208  Q
    |||    
T  41227508 tgt 41227510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 14238214 - 14238484
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||||||||||||| || |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14238214 ggtgtttaagagtatctaacctatgttgtgatgaatctaattttgtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 14238313  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||||||||| ||||| ||||||||||||| || ||     
T  14238314 gttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttataccatccaagtggttattattaatgttgttat 14238411  T
Q  203 ---------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14238412 gattcaagttgttgtatgttgctgtctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 14238484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 7052665 - 7052951
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7052665 aagagtatttaacctatgttgtgatggatctaattgg-tttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttg 7052763  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-------- 202  Q
    ||||||||||| |||||||| ||| ||||| | |||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |||||            
T  7052764 aataatttgagatacatata-ttaggtgaatattgtatgatatag-aaataatgttgttataccatccaagtggttattattaatgttgctatgattcaa 7052861  T
Q  203 --tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
      |||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||    
T  7052862 gttgttgtatgttgctgtctgtgctgttattgattattaaatcattaagttgcatatgttggtcaaagttg-tcaagttgtaagttgttgt 7052951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 105 - 313
Target Start/End: Complemental strand, 19676100 - 19675881
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatg 204  Q
    |||||| |||||||||  |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19676100 ttgttggataatttgaaatacatatatttatgtgcaaaaggtatgatatagaaaataattttgttataccattcaagttgttattattaatgatgctatg 19676001  T
Q  205 ttgt-----------atgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaat 293  Q
    ||||           |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19676000 ttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaat 19675901  T
Q  294 gtcgttaaagttgtaagttg 313  Q
    ||||||||||||||||||||    
T  19675900 gtcgttaaagttgtaagttg 19675881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 51082666 - 51082496
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||||||||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51082666 ggtgtttaagagtatctaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 51082567  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccat 176  Q
    |||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||||||    
T  51082566 gttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttataccat 51082496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 73 - 265
Target Start/End: Original strand, 38887798 - 38887999
Alignment:
Q  73 taatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttata 172  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  38887798 taatttgaaatacatatattatatgaatgttgttgttgaataatttgaggtacatata-ttatgtgaatattgtatgatatag-aaataatgttgttata 38887895  T
Q  173 ccattcaagttgttattattaatgatgcta----------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttgg 261  Q
    |||| ||||| ||||||||||||| |||||          |||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  38887896 ccatccaagtggttattattaatgttgctatgattcaagttgttgtatgttgctgtttctgctgttattgattattaaatcattaagttgcatatgttgg 38887995  T
Q  262 tcaa 265  Q
    ||||    
T  38887996 tcaa 38887999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 38887697 - 38887817
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  38887697 aagagtatttaacctatgttgtgatggatctaattgg-tttgacgtggatatctttgttggataagttgaaatacatatattatatgaatgttgttgttg 38887795  T
Q  111 aataatttgagttacatatatt 132  Q
    ||||||||||  ||||||||||    
T  38887796 aataatttgaaatacatatatt 38887817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 21239897 - 21239998
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||| | |||||||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  21239897 ggtgtttaagaatttttaacctatgttgtgatggatctaatttggtttgacgtgaatatttttgttggataatttgaaatacatatattatgtgaatgtt 21239996  T
Q  104 gt 105  Q
    ||    
T  21239997 gt 21239998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 51323725 - 51323628
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatg 101  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  51323725 ggtgtttaagagtatttaacatatgttgtgatggatctaatttggtttgacatgaatatctttgttggataatttgaaatacatatattatgtgaatg 51323628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 19676161 - 19676073
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatatt 92  Q
    |||||| ||||||||||||  ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19676161 ggtgtttaagagtatttaatatatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatatt 19676073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 39060544 - 39060479
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  39060544 tgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttgg 39060479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 1643046 - 1642979
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  1643046 ggtgtttaagagtatttaacctatgttttgatggatctaacttgatttgacgtgaatatctttgttgg 1642979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 52983491 - 52983378
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || |||||||||| ||||| ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||| || |    
T  52983491 tgttgttggttaatttaagctacatatatt-atgtggaaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatgttgtt 52983393  T
Q  202 atgttgtatgttgct 216  Q
    |||||| | ||||||    
T  52983392 atgttgcaagttgct 52983378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 18275241 - 18275157
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| | ||||||||||    
T  18275241 tacatatatt-atgtggaaaatgtatgatatagaaaatattgttgtttatatcattcaagttgttattattaacgttgctatgttg 18275157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 41226055 - 41226116
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  41226055 tgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttg 41226116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 12710338 - 12710278
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  12710338 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatct 12710278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 1642764 - 1642680
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgta 209  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||| ||||||| || ||| ||||||||||||    
T  1642764 tacatatatt-atgtgaaaa-tgtatgttatagaaaataatgttgttatatcattcaagatgttattgttgatgctgctatgttgta 1642680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 51476322 - 51476218
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || |||||||||| ||||| ||||||||||||||||| ||||  |||||| |||  |||||||||||||||||||||| ||||    
T  51476322 tgttgttggttaatttaagctacatatatt-atgtggaaaatgtatgatatagataataccgttgtttatattattcaagttgttattattaatgttgct 51476224  T
Q  202 atgttg 207  Q
    ||||||    
T  51476223 atgttg 51476218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 22824008 - 22824075
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||| |||||||||||||||||| ||||||||| ||  |||||||||||||||||||||||    
T  22824008 ggtgtttaagattatttaacctatgttgtgatggatctaacttagtttgacgtgaatatctttgttgg 22824075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 50544302 - 50544239
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||    
T  50544302 ggtgtttaagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatatttg 50544239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 21181059 - 21181144
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||| ||||||| ||||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  21181059 ttatgagaaaaatatatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 21181144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 42697045 - 42696963
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||||| ||| |||| |||| ||||||||| ||||| ||||    
T  42697045 tacatatatt-atgtgaaaag-gtatgatatagaaaataatgttgttatatcatccaagatgttgttattaatgttgctacgttg 42696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 18121055 - 18120993
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||| || |||||  ||| ||||||||||||||||||    
T  18121055 ggtgtttaagagtatttaacctatgttgtgatgaatctatcttggtttgacgtgaatatcttt 18120993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 7792594 - 7792671
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  ||||| | || ||||||||||||||||||||||  |||||||||| | ||||||    
T  7792594 aaaatgtatgatatagaaaatatcgttgtaaatatcattcaagttgttattattaatattgctatgttgcaagttgct 7792671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 13528528 - 13528613
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| |||||||||||||||||||||   |||| ||||| ||||||||||||| ||||||||  |||||||||| | ||||||    
T  13528528 ttatgtggaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttgct 13528613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 38057395 - 38057463
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  38057395 aaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 38057463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 44822863 - 44822919
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaat 195  Q
    ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||    
T  44822863 aaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaat 44822919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 45496388 - 45496328
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||||||| |  |||||| ||| |||||| ||||||||||||||||    
T  45496388 aagagtatttaacctatgttgtgattaatctaacttggtttgacatgaatatctttgttgg 45496328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 48301375 - 48301315
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||| ||| | ||||||||||| ||||| ||||||||| |||||||    
T  48301375 aagagtatttaacctatgtggtgatagatctaatttggtttgatgtgaatatccttgttgg 48301315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 18270587 - 18270518
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatg-ttgttataccattcaagttgttattatt 192  Q
    |||||||||| ||||| |||||||||||||||||||||| || || ||||| ||||| |||||||||||||    
T  18270587 tacatatatt-atgtggaaaatgtatgatatagaaaatattgttttttatatcattctagttgttattatt 18270518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 24720295 - 24720357
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||| | || |||||  ||| ||||||||||||||||||    
T  24720295 ggtgtttaagagtatttaacctatgttgcgatgaatctatcttggtttgacgtgaatatcttt 24720357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 10813273 - 10813342
Alignment:
Q  148 tgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  10813273 tgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 10813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 13302135 - 13302045
Alignment:
Q  100 tgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattat 191  Q
    |||||||||||  ||||||||| |  ||||||| ||||| ||| |||||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  13302135 tgttgttgttgtttaatttgagatctatatatt-atgtggaaattgtatgatatag-aaatattgttgttcatatcattcaagttgttattat 13302045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 19761969 - 19762037
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | ||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  19761969 aaaatgtatgatatggaaattattattgattatatcattcaagttgttattattgatgttgctatgttg 19762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 24815594 - 24815647
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaat 195  Q
    ||||||||||||||||||||||  |||  |||| ||||||||||||||||||||||    
T  24815594 aaaatgtatgatatagaaaatatcgtt--tatatcattcaagttgttattattaat 24815647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 16400986 - 16400900
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-atac-cattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||| ||||||||||||| ||||||||||  |||||| |||  ||||||||||||||||||||||  | |||||||| | ||||||    
T  16400986 ttatgagaaaaatgtatgagatagaaaatatcgttgtttatagtcattcaagttgttattattaatatttctatgttgcaagttgct 16400900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 18823952 - 18823839
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || || ||||||| ||||| ||||| |||||||||||||||   |||||| ||| ||||||||||||| ||||||||  || |    
T  18823952 tgttgttggttaatttaagctatatatatt-atgtggaaaatatatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgtt 18823854  T
Q  202 atgttgtatgttgct 216  Q
    |||||| | ||||||    
T  18823853 atgttgcaagttgct 18823839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 39060284 - 39060246
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  39060284 gttaaagttgtaagttgttgtcaatgtcgttgaagttgt 39060246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 11809199 - 11809252
Alignment:
Q  18 tttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||| || |||||| |||  |||||||||||||| |||||||    
T  11809199 tttaacctatgttgtgatgaatctaacttgggttgacgtgaatatcattgttgg 11809252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 6833658 - 6833602
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||||| |||||||||||||| || |||||| ||| ||||| |||||||| ||||    
T  6833658 aagagtatataacctatgttgtgatgaatctaacttggtttgatgtgaatatatttg 6833602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 8276734 - 8276802
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgt-tataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | |||| |||| ||||||||||||| ||||| ||| || |||||||    
T  8276734 aaaatgtatgatatagaaattattattgtatatatcattcaagttgttgttattgatgttgttatgttg 8276802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 45496167 - 45496123
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||| ||||||||||||| |||| ||| |||||||||||||    
T  45496167 gttaaagttgtaagttgttgtcgatgttgttgaagttgtaagttg 45496123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 36839621 - 36839304
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  36839621 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatttattatgtgaatgtt 36839522  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||   |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36839521 gttg---aataatttgagttacatatatttatgtggaaaatgtatgatatagaaaatagtgttgttataccattcaagttgttattattaatgatgctat 36839425  T
Q  204 gtt-----------gtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    |||           |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36839424 gttgtgaagttgtcgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 36839325  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  36839324 tgtcgttaaagttgtaagttg 36839304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 23969225 - 23969545
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  23969225 ggtgtttaagagtatttaacctatgttgtgattgatctaatttggtttgacgtaaatatctttgttggataatttgaaatacatatattatgtgaatgtt 23969324  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23969325 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgatat 23969424  T
Q  204 gtt-----------gtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    |||           |||||||| ||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  23969425 gttgtgaagttgtagtatgttgatgtatctgctatattgattattaaatcattaagttgcatatgttggtaaagttgttaaagttgtaagttgttgtcaa 23969524  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||| ||||||||||    
T  23969525 tgtcgttaaatttgtaagttg 23969545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 24515636 - 24515316
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||||| |||||||||| ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  24515636 ggtgtttaagagtatttaatctatgttgtgatggatctaatttggtttgacatgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 24515537  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  24515536 gttgttgaataatttcagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattgaagttgttatgattaatgatgctat 24515437  T
Q  204 -----------gttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
               ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24515436 gttgcgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 24515337  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||| ||||||    
T  24515336 tgtcgttaaagttgcaagttg 24515316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 28653104 - 28653424
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||| ||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  28653104 ggtgtttaagagtatttaacatatcttgtgatggatctaatttggtttcacgtgaatatctttgttggataatttgaaatgcatatattacgtgaatgtt 28653203  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  28653204 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagataataatgttgttataccattcaagttgttattattaatgatgctat 28653303  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28653304 gttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 28653403  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  28653404 tgtcgttaaagttgtaagttg 28653424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 313
Target Start/End: Complemental strand, 17306937 - 17306617
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||  ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  17306937 ggtgtttaagatcatttaacatatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatttattatgtgaatgtt 17306838  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  17306837 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatattgttataaaattcaagttgttattattaatgatgctat 17306738  T
Q  204 g-----------ttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
    |           |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  17306737 gttgtgaagttgttgtatgttgttgtctctgctgtattaattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtatgttgttgtcaa 17306638  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  17306637 tgtcgttaaagttgtaagttg 17306617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 9975379 - 9975083
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaat-acatatattatgtgaatgt 102  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  9975379 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaattacatatgttatgtgaatgt 9975280  T
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9975279 tgttgttgaataatttgagttacatatatatatgtggaaaatgtatggtatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 9975180  T
Q  203 tgt-----------tgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttg 288  Q
    |||           ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| |||||    
T  9975179 tgttgtaaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttacatatgttggtcaaattgttaaagttgtaagatgttg 9975083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 263
Target Start/End: Original strand, 27485072 - 27485343
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| |||||| || ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  27485072 ggtgtttaagagtatttaacatatgttttgatggatctaatttggtttgacgtgaatatatttgttggataatttgaaatacatatattatgtgaatgtt 27485171  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27485172 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 27485271  T
Q  204 gttg-----------tatgttgctgtctctgttgtattg-attattaaatcattaagttgcatatgttggtc 263  Q
    ||||           ||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  27485272 gttgtgaagttgtgatatgttgatgtctctgttgtattgaattattaaatcattaagttacatatgttggtc 27485343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 24781442 - 24781646
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24781442 ggtgtttaagaatatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 24781541  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
     |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24781542 attgttgaataatttgagttacatatatttatgtggaaaagatatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 24781641  T
Q  204 gttgt 208  Q
    |||||    
T  24781642 gttgt 24781646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 5031734 - 5031922
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5031734 tgtttaagagtatttaacatatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgt 5031833  T
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaa 194  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5031834 tgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttatatcattcaagttgttattattaa 5031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 19358272 - 19358110
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgt------- 205  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||           
T  19358272 taatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctatgttgtaaag 19358173  T
Q  206 ----tgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaa 265  Q
        ||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  19358172 ttgttgtatgttgatgtctctactgtattg-ttattaaatcattaagttgcatatgttggtcaa 19358110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 113 - 270
Target Start/End: Complemental strand, 14693547 - 14693380
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta---------- 202  Q
    ||||||||| || ||| | ||||||| |||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||| |||||              
T  14693547 taatttgagctatatacaattatgtggaaaatgtatgatatagaaaatattgatgttatatcattcaagttgttatgattaatgttgctatgattcaagt 14693448  T
Q  203 tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaagttgt 270  Q
    ||||||||| || ||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||    
T  14693447 tgttgtatg-tgatgtctctgccgttattgattatttaatcattaagttgcatatgttggtcaagttgt 14693380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 23069059 - 23069148
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| |||||||||||||||||||    
T  23069059 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaat 23069148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 10897503 - 10897666
Alignment:
Q  114 aatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatg-------- 204  Q
    |||||||| |||||||||||||||| ||||  |||| |||| |||||| |  |||| ||||||| ||||| ||||||||||||| |||||||            
T  10897503 aatttgagctacatatatttatgtggaaaagatatgttatacaaaatattcatgtttataccatccaagtggttattattaatgttgctatgattcaagt 10897602  T
Q  205 --ttgtatgttgctgtctctgttgt-attgattattaaatcattaagttgcatatgttggtcaa 265  Q
      |||||||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  10897603 tgttgtatgttgttgtctctgctgttattgattattaaatcattaagttgcatatattggtcaa 10897666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 43707886 - 43707953
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  43707886 ggtgtttaagattatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttgg 43707953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 9785022 - 9784931
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| || |||||||||| |  |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  9785022 agtatttaacatgtgttgtgatgaatctaatttggtcggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 9784931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22686290 - 22686223
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||    
T  22686290 ggtgtttaagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaataactttgttgg 22686223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 3539091 - 3538981
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || || |    
T  3539091 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttga 3538994  T
Q  195 tgatgctatgttg 207  Q
    || || |||||||    
T  3538993 tgttgttatgttg 3538981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 21316263 - 21316325
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||| || |||||  ||||||||||||||||||||||    
T  21316263 ggtgtttaagagtatttaacctatgttgtgatgaatctatcttgatttgacgtgaatatcttt 21316325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 25587301 - 25587355
Alignment:
Q  17 atttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  25587301 atttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 25587355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 44071837 - 44071733
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgc 200  Q
    ||||||||| |||||||||| |||||||||| ||||| ||| ||||||||||||||| || ||||||| ||| | |||||||||||||||||| || ||     
T  44071837 ttgttgttggataatttgagatacatatatt-atgtggaaattgtatgatatagaaa-tattgttgttcatatcgttcaagttgttattattagtgttgt 44071740  T
Q  201 tatgttg 207  Q
    |||||||    
T  44071739 tatgttg 44071733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 19201810 - 19201870
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||||||    
T  19201810 aagagtatttaacctatgtggtgatggatctaatttggtttgatgtgaatatccttgttgg 19201870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 24273861 - 24273921
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| ||| ||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  24273861 ggtgtttaagtgtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatct 24273921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 5985395 - 5985336
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatg 199  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||||| |||||| |||||    
T  5985395 aaaaggtatgatatagaaaataatgttgttatatcatccaagttgttgttattattgatg 5985336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 23609927 - 23609865
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||| |  |||||| ||| ||||||||||||||||||    
T  23609927 ggtgtttaagagtatttaacctatgttgtggtaaatctaacttggtttgacgtgaatatcttt 23609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 25141432 - 25141349
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||||||||||||||||| |||||||| ||||||||| | | |||||||||| ||||| ||||||| ||| |||||||||||||    
T  25141432 ttgttgttgaataatttgagatacatata-ttatgtgaatattttatgatatag-aaatattgttgttcatatcattcaagttgtt 25141349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 9784971 - 9784909
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  9784971 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 9784909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 21368550 - 21368490
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||| ||  ||||||||||||| ||||| ||||||||| |||||||    
T  21368550 aagagtatttaacctatgtggtaatggatctaatttggtttgatgtgaatatccttgttgg 21368490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 31520435 - 31520371
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaat 195  Q
    ||||||| ||||||||||||||||||||||   |||||| || ||||||||||||||||||||||    
T  31520435 ttatgtggaaaatgtatgatatagaaaatatcattgttattatcattcaagttgttattattaat 31520371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 1384287 - 1384350
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| | |||||||||||||||| |||| || |||||| ||| |||||||||||||||||||    
T  1384287 ggtgtttacgagtatttaacctatgctgtgatgaatctaacttggtttgacgtgaatatctttg 1384350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 18391046 - 18391124
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattat 191  Q
    ||||||||| |||||||||| ||||| ||||| |||||||| | ||||| ||||||| ||| ||||||||||||||||||    
T  18391046 taatttgagctacatatatt-atgtggaaaatatatgatatcggaaatattgttgttcatatcattcaagttgttattat 18391124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 25141248 - 25141159
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | | |||||||||| ||||| | ||||| ||| |||||||||||||    
T  25141248 tgaatattgttgttgaataatttgagatacatata-ttatgtgaatattatatgatatag-aaatattattgttcatatcattcaagttgtt 25141159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 28345677 - 28345744
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| || |||| |||| |||||||||| ||||||||| ||| |||||| ||||||||||||||||    
T  28345677 ggtgtttaatagtacttaatctatgttgtgatggatctaacttggtttgacatgaatatctttgttgg 28345744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 6478034 - 6478119
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| |||||| ||||||||||||||   |||||| ||| ||||||||||||| ||||||||  |||||||||| | ||||||    
T  6478034 ttatgtggaaaatggatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttgct 6478119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 21336056 - 21336116
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||| ||||||||||||||||||||| | || |||||  ||| ||||||||||||||||||    
T  21336056 tgtttaagagtatttaacctatgttgggatgaatctatcttggtttgacgtgaatatcttt 21336116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 27851922 - 27851836
Alignment:
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattat 191  Q
    |||||||  ||||||||  |||||||||| ||||| ||| |||||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  27851922 gttgttggttaatttgaaatacatatatt-atgtggaaattgtatgatatag-aaatattgttgttcatatcattcaagttgttattat 27851836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 23069113 - 23069165
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaa 158  Q
    ||||||||||||||||| |||||||| ||||||||| | | |||||||||||||    
T  23069113 ttgttgaataatttgagatacatata-ttatgtgaatattttatgatatagaaa 23069165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 27860629 - 27860542
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattat 191  Q
    ||||||||  ||| ||||| || ||||||| ||||| ||| |||||||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  27860629 tgttgttggttaaattgagatagatatatt-atgtggaaattgtatgatatag-aaatattgttgttcatatcattcaagttgttattat 27860542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 3539082 - 3539042
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  3539082 ttgttggataatttgagatacatatattatgtgaatattgt 3539042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 18389041 - 18389109
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | ||||| ||| ||||||||||||||||||  ||| ||||||||||    
T  18389041 aaaatgtatgatatggaaattattattgtttatatcattcaagttgttattatcgatgttgctatgttg 18389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 27851921 - 27851889
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtg 97  Q
    ||||||| |||||||||||||||||||||||||    
T  27851921 ttgttggttaatttgaaatacatatattatgtg 27851889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 20179123 - 20179443
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20179123 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 20179222  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  20179223 gttgttgaataatttgagttacgtatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgttat 20179322  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  20179323 gttgtgaagttgttgtatgttgttgtctttgctgtattgattattaaataattaagttgcatatgttggtcaagttgttaaagttgtaggttgttgtcaa 20179422  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  20179423 tgtcgttaaagttgtaagttg 20179443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 42818509 - 42818820
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||||| ||||| |||| |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  42818509 ggtgtttaagagtatttaatctatggtgtgatggatctaatttgatttgacgtgaatttatttgttggataatttgaaatacatatattatgtgaatgtt 42818608  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||     
T  42818609 gttgttgaataatttgagttacatatatttatgaggaaaagatatgatatagaaaataatgttgttataccattcaagtttttattattaacgatgatat 42818708  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||    
T  42818709 gttgtgaagttgttgtatgttgttgtctctagtgtattgattattaaatcattaagttgcatatgttggtcaagtt---------gtaagttgttgtcaa 42818799  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||    
T  42818800 tgtcgttaaagttgtaagttg 42818820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 19140215 - 19140011
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19140215 ggtgtttaacagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 19140116  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140115 cttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 19140016  T
Q  204 gttgt 208  Q
    |||||    
T  19140015 gttgt 19140011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 39936612 - 39936816
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39936612 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 39936711  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39936712 gttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgtggttataccattcaagttgttattattaatgatgctat 39936811  T
Q  204 gttgt 208  Q
    |||||    
T  39936812 gttgt 39936816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 11 - 289
Target Start/End: Original strand, 20084247 - 20084532
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    |||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||  |||||||||||||||||| ||| |||||||| ||||||    
T  20084247 aagattatttaacctatgttgtgatggatctaattgg-tttgacgtgaatatctttgttgaataatttgaaatacatatactatatgaatgttcttgttg 20084345  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-------- 202  Q
    ||||||||||| |||||||| ||||||||| | ||||||||||| |||||||||||||||||||| |||||| ||||||||||||| || ||            
T  20084346 aataatttgaggtacatata-ttatgtgaatattgtatgatata-aaaataatgttgttatacca-tcaagtggttattattaatgttgttatgattcaa 20084442  T
Q  203 --tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
      |||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||| |||||| | |||| ||||||||||||    
T  20084443 gttgttgtatgttgttgtctctgctgttattgattattaaattattaagttgcatatgttggtcaaagttg-tcaagttgtaagttgttgt 20084532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 6102362 - 6102536
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  6102362 aagagtatttaacctatgttgtgatggatctaattgg-tttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttattg 6102460  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttat 188  Q
    ||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||||||||| ||||| |||||    
T  6102461 aataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttataccatccaagtggttat 6102536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 123 - 289
Target Start/End: Original strand, 22259092 - 22259267
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-----------tgttgtatg 211  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||||    
T  22259092 tacatatatt-atgtgaaaag-gtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgccatgttgtgaagttgttgtatg 22259189  T
Q  212 ttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||    
T  22259190 ttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaaagttg-tcaagttgtaagttgttgt 22259267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 5760983 - 5760882
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  5760983 ggtgtttaagagtatttaacctatgttgtgatggatctaaattggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaatatt 5760884  T
Q  104 gt 105  Q
    ||    
T  5760883 gt 5760882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 24713408 - 24713323
Alignment:
Q  203 tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttg 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  24713408 tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgtttaagttgtaagatgttg 24713323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 17217920 - 17217830
Alignment:
Q  116 tttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||||||    
T  17217920 tttgaattacatatatt-atgtggaaagtgtatgatatagaaaataatgttgttatatcatctaagttgttattattaatgttgctatgttg 17217830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 21346011 - 21346102
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  21346011 agtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 21346102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 289
Target Start/End: Complemental strand, 23947509 - 23947348
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg----------tatgttgctgtctctgttg-ta 228  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||||||||||||||||| ||||||||||          |||||||||||||||| || ||    
T  23947509 aaatgtatgatatagaaaatattattgtttatatcattcaagttgttattattaatgttgctatgttgcaagttgttttatgttgctgtctctgctgtta 23947410  T
Q  229 ttgattattaa-atcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
    ||||||||||| ||||||||||||||  |||||||| ||||||  ||||||||||||||||||    
T  23947409 ttgattattaatatcattaagttgcaagtgttggtctaagttg-caaagtcgtaagttgttgt 23947348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 289
Target Start/End: Complemental strand, 23889070 - 23888873
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  ||||||||| |||||||||| ||||| |||||||||||||||||| ||| ||||| ||||| | |||||||||||||||||||||  |||    
T  23889070 tgttgttggttaatttgagctacatatatt-atgtggaaaatgtatgatatagaagatattgttgtttatatcgttcaagttgttattattaatgtagct 23888972  T
Q  202 atgttg---------tatgttgctgtctctgttg-tattgattattaa-atcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
     |||||         ||||||||||||||| ||| | ||||||||||| ||||||||||||||  |||||||| ||||||  ||||| ||||||||||||    
T  23888971 gtgttgcaagttgtttatgttgctgtctctattgttgttgattattaatatcattaagttgcaagtgttggtctaagttg-caaagttgtaagttgttgt 23888873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 23914364 - 23914273
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | |||| || ||||||||||||| |  |||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  23914364 agtatttaacatgtgttatgatggatctaatttggtcggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatgttgt 23914273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 20517719 - 20517786
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||    
T  20517719 ggtgtttaagagtatttaacctatgttgcgatggatctaacttggtttgacgtgaatatctttgttgg 20517786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22344492 - 22344425
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||||||    
T  22344492 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctttgttgg 22344425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22356152 - 22356085
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||||||    
T  22356152 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctttgttgg 22356085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 22584461 - 22584602
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg---------tatgt 212  Q
    |||||||||| |||||||||||||||||||| |||||||  |||||| ||| ||||||||| ||||||||||||| ||||||||||         |||||    
T  22584461 tacatatatt-atgtgaaaaatgtatgatattgaaaatatcgttgtttatatcattcaagtggttattattaatgttgctatgttgcaagttgtttatgt 22584559  T
Q  213 tgctgtctctgttg-tattgattattaa-atcattaagttgca 253  Q
    ||||||||||| || | ||||||||||| ||||||||||||||    
T  22584560 tgctgtctctgctgttgttgattattaatatcattaagttgca 22584602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 17907695 - 17907779
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||| ||||| |||| ||||||||||||||||| ||||||| ||| ||||||||||| ||||||||||| ||||||||||    
T  17907695 tacatatatt-atgtggaaaaagtatgatatagaaaatattgttgttcatatcattcaagttgatattattaatgttgctatgttg 17907779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 36305107 - 36305042
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||    
T  36305107 tgtttaagagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatacctttgttgg 36305042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 36728025 - 36728124
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || ||||    
T  36728025 tgaatattgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaa 36728122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 32950051 - 32949991
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  32950051 ggtgtttaagattatttaacctatgttgtgttgaatctaatttggtttgacgtgaatatct 32949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 4381394 - 4381457
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  4381394 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctttg 4381457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22483197 - 22483130
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||| ||||||||| ||||||||| ||| ||||| |||||||||||||||||    
T  22483197 ggtgtttaagagtatttaacttatgttgtgatggatctaacttggtttgatgtgaatatctttgttgg 22483130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 31723309 - 31723408
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||| |||||||| ||||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || ||||    
T  31723309 tgaatattgttgttaaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaa 31723406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 361814 - 361874
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| ||||||||||||||||||||||| || |||||||||| ||||| ||||||||||    
T  361814 ggtgtttaagagtatttaacctatgttgtgatgaatctaatttggtttgatgtgaatatct 361874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 22474195 - 22474139
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    ||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  22474195 aagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctttg 22474139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 18817063 - 18817126
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || || ||| ||| |||||||||||||||||||    
T  18817063 ggtgtttaagagtatttaacctatgttgtgatgaatgtaacttggtttgacgtgaatatctttg 18817126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 31723499 - 31723588
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  31723499 tgaatattgttgttgaataatttgagatacatata-ttatctgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 31723588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 22244729 - 22244645
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||| ||||  |||||||||||||||||||||| | ||||| ||| | ||||||||||||||||||||| | ||||||||    
T  22244729 tacatatatt-atgttgaaaatgtatgatatagaaaatattattgtttatatctttcaagttgttattattaatgtttctatgttg 22244645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 18833914 - 18833854
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||| |||||||    
T  18833914 aagagtatttaacctatatggtgatggatctaatttggtttgatgtgaatatccttgttgg 18833854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 20454548 - 20454472
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  20454548 aaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 20454472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 20455305 - 20455229
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  20455305 aaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 20455229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 20460283 - 20460207
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  20460283 aaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 20460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 21346062 - 21346124
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  21346062 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 21346124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 22318655 - 22318765
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    ||||| ||||||||| |||||||||| |||||||||| | ||| | | ||||||||||||||| || ||||||| ||| ||||||||||||| || ||||    
T  22318655 tgaatattgttgttggataatttgagatacatatatt-acgtggatattgtatgatatagaaa-tattgttgttcatatcattcaagttgttgttgttaa 22318752  T
Q  195 tgatgctatgttg 207  Q
    || || |||||||    
T  22318753 tgttgttatgttg 22318765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 5760922 - 5760842
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  5760922 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 5760842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 17979018 - 17979080
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| || |||||||||||||||||||| || |||||  ||| ||||||||||||||||||    
T  17979018 ggtgtttaatagtatttaacctatgttgtgatgaatctatcttggtttgacgtgaatatcttt 17979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 18815425 - 18815487
Alignment:
Q  5 gtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    ||||| ||||||||||||||||||||||| || |||||| ||| ||| |||||||||| ||||    
T  18815425 gtgtttaagagtatttaacctatgttgtgatgaatctaacttggtttcacgtgaatatatttg 18815487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 45471168 - 45471264
Alignment:
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctat 203  Q
    ||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||| || | ||||||| ||||||    
T  45471168 tgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttattgtgattaatgttgctat 45471264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 17437927 - 17437976
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaat 60  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||    
T  17437927 aagagtatttaacctatgtggtgatggatctaatttggtttgatgtgaat 17437976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 5082821 - 5082881
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||| ||||  ||| ||||||||||||| ||||| ||||||||| |||||||    
T  5082821 aagagtatttaacttatgcggtgatggatctaatttggtttgatgtgaatatccttgttgg 5082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 12577058 - 12577014
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||    
T  12577058 gttaaagttgtaagttgttgtcgatgtcgataaagttgtaagttg 12577014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 15635922 - 15635978
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaat 195  Q
    ||||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||    
T  15635922 aaaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaat 15635978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 19882267 - 19882207
Alignment:
Q  148 tgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||  |||||| ||| ||||||||||||||||||||||  ||||||||||    
T  19882267 tgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttg 19882207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 23914313 - 23914251
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| |||||||||   |||||||||||| |||||||||||||    
T  23914313 ttgttgaataatttgagatacatata-ttatgtgaatgttgtatgatatag-aaataatgttgtt 23914251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 36733126 - 36733178
Alignment:
Q  15 gtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    ||||||||||||||||||| || |||||| ||| |||||||| ||||||||||    
T  36733126 gtatttaacctatgttgtgatgaatctaacttggtttgacgttaatatctttg 36733178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 39695272 - 39695340
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||| ||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  39695272 aaaatgtatgatataaaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 39695340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 5080459 - 5080396
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| || |||||||||||||||||||| || |||| | ||| |||||||||||||| ||||    
T  5080459 ggtgtttaaaagtatttaacctatgttgtgatgaatcttacttggtttgacgtgaatatatttg 5080396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 38988491 - 38988453
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  38988491 gttaaagttgtaagttgttgtcgatgtcgttaaagttgt 38988453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 39019588 - 39019550
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  39019588 gttaaagttgtaagttgttgtcgatgtcgttaaagttgt 39019550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 25849190 - 25849258
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | ||||| ||| ||||||||||||||||||| ||| |||| |||||    
T  25849190 aaaatgtatgatatggaaattattattgtttatatcattcaagttgttattattgatgttgctgtgttg 25849258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 36727854 - 36727890
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatt 132  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  36727854 tgaatattgttgttgaataatttgagatacatatatt 36727890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 13138 - 13456
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  13138 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaa--catatattatgtgaatgtt 13235  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  13236 gttgttgaataatttgagttacatatatttatgtggaaaaggtataatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctat 13335  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13336 gttgtgaagttgttgtatgttattgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 13435  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||| |||||| |||||||||    
T  13436 tgtcattaaagctgtaagttg 13456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 4 - 313
Target Start/End: Original strand, 19405 - 19723
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  19405 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaa--catatattatgtgaatgtt 19502  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  19503 gttgttgaataatttgagttacatatatttatgtggaaaaggtataatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctat 19602  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19603 gttgtgaagttgttgtatgttcttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 19702  T
Q  293 tgtcgttaaagttgtaagttg 313  Q
    |||| |||||| |||||||||    
T  19703 tgtcattaaagctgtaagttg 19723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 4 - 310
Target Start/End: Complemental strand, 19921084 - 19920767
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19921084 ggtgtttaagagtatttaacatatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 19920985  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||     
T  19920984 gttgttgaataatttgagttacatatatttatgtggaaaaactatgatatagaaaataatgttgttataccattcaagttattattattaatgatgatat 19920885  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaa 292  Q
              |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19920884 gttgtgaagttgttgtgtgttgctgtctctgctgtattgtttattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaa 19920785  T
Q  293 tgtcgttaaagttgtaag 310  Q
    | | ||| ||||||||||    
T  19920784 tattgtttaagttgtaag 19920767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 289
Target Start/End: Original strand, 36509487 - 36509712
Alignment:
Q  73 taatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttata 172  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| |  ||||||||||| |||||| ||| |||||    
T  36509487 taatttgaaatacatatattatatgaatgttgttgttgaataatttgaggtacatata-ttatgtgaatatcgtatgatatag-aaataacgttattata 36509584  T
Q  173 ccattcaagttgttattattaatgatgcta----------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttgg 261  Q
    |||| |||||  |||||||||||| ||| |          ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  36509585 ccatccaagtgattattattaatgttgccatgattcaagttgttgtacgttgctgtctctgttgttattgattattaaatcattaagttgcatatgttag 36509684  T
Q  262 tc-aagttgttaaagtcgtaagttgttgt 289  Q
    || |||||| | |||| ||||||||||||    
T  36509685 tcaaagttg-tcaagttgtaagttgttgt 36509712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 32607927 - 32608054
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  32607927 ggtgtttaagagtatttaacctatgttgtgatggatctaattggctt-gacgtgaatatctttgttggataatttgaaatacatatattatatgaatgtt 32608025  T
Q  104 gttgttgaataatttgagttacatatatt 132  Q
    |||||||||||||||||  ||||||||||    
T  32608026 gttgttgaataatttgaaatacatatatt 32608054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 36509386 - 36509506
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||    
T  36509386 aagagtatttaacctatgttgtgatggatctaattgg-tttgacgtgaatatttttgttggataatttgaagtacatatattatatgaatgttgttgttg 36509484  T
Q  111 aataatttgagttacatatatt 132  Q
    ||||||||||  ||||||||||    
T  36509485 aataatttgaaatacatatatt 36509506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 32608035 - 32608164
Alignment:
Q  73 taatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttata 172  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  32608035 taatttgaaatacatatattatatgaatgttgttgttgaataattttagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttata 32608132  T
Q  173 ccattcaagttgttattattaatgatgctatg 204  Q
     ||| ||||| ||||||||||||| |||||||    
T  32608133 tcatccaagtggttattattaatgttgctatg 32608164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 20566004 - 20565903
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  20566004 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgatgtgaatatctatgttggataatttgaaatacatatattatgtgaatgtt 20565905  T
Q  104 gt 105  Q
    ||    
T  20565904 gt 20565903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 265
Target Start/End: Original strand, 21406391 - 21406562
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    ||||||||  ||||||||| |  ||||||| | ||||| | ||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||| |||||    
T  21406391 tgttgttgggtaatttgagatgtatatatt-acgtgaatattgtatgatatacaaa-taatgttgttataccatccaagtggttattattaatgttgcta 21406488  T
Q  203 tg----------ttgtatgttgctgtctctgttgt-attgattattaaatcattaagttgcatatgttggtcaa 265  Q
    ||          ||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  21406489 tgattcaagttgttgtatgttgctgtctctgctgttattgattattaaatcatttagttgcatatgttggtcaa 21406562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 20198197 - 20198257
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  20198197 aagagtatttaacctatgttttgatggatctaatttggtttgacgtgaatatctttgttgg 20198257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 30612003 - 30611936
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||||    
T  30612003 ggtgtttaagagtatttaacctatgttgtgatggatctaacttggtgtgacgtgaatatctttgttgg 30611936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 24277348 - 24277425
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||  |||||||||| | ||||||    
T  24277348 aaaatgtatgatatagaaaatatcgttgtttataccattcaagttgttattattaatattgctatgttgcaagttgct 24277425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 24384865 - 24384788
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||  |||||||||| | ||||||    
T  24384865 aaaatgtatgatatagaaaatatcgttgtttataccattcaagttgttattattaatattgctatgttgcaagttgct 24384788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 21399605 - 21399672
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||| ||||| || |||||||||| || ||||||||||||||||||||    
T  21399605 ggtgtttaagagtatttaacctattttgtgatgaatctaatttggttagacgtgaatatctttgttgg 21399672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 25250633 - 25250700
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||||||| ||||||||||    
T  25250633 aaaatgtatgatatagaaaataatgttgatatatcatccaatttgttgttattaatgttgctatgttg 25250700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 25314418 - 25314485
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||||||| ||||||||||    
T  25314418 aaaatgtatgatatagaaaataatgttgatatatcatccaatttgttgttattaatgttgctatgttg 25314485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 30613963 - 30613896
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| | |||||||||||||||||||||    
T  30613963 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtgtgacgtgaatatctttgttgg 30613896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Complemental strand, 20565762 - 20565701
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaa 158  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||||||    
T  20565762 tgaatgttgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 20565701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 23200285 - 23200369
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgta 209  Q
    |||||||||| |||||||||  ||||| |||||||||||||||||||||| |||||||| ||||||| || ||| ||||||||||||    
T  23200285 tacatatatt-atgtgaaaag-gtatgttatagaaaataatgttgttatatcattcaagatgttattgttgatgctgctatgttgta 23200369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 16605206 - 16605267
Alignment:
Q  5 gtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    ||||| ||||||||||||||||||||||| || |||||| ||| ||||||||||||||||||    
T  16605206 gtgtttaagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatcttt 16605267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 23199998 - 23200058
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||| || ||||||||| ||| ||||||||||||||| |||||||    
T  23199998 aagagtatttaacctatgttttgatggatctaacttggtttgacgtgaatatcgttgttgg 23200058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 33895491 - 33895551
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||  ||| ||||||||||||| ||||| |||||||||||||||||    
T  33895491 aagagtatttaacctatgcggtgatggatctaatttggtttgatgtgaatatctttgttgg 33895551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 22111050 - 22110987
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || || ||| ||| |||||||||||||||||||    
T  22111050 ggtgtttaagagtatttaacctatgttgtgatgaatataacttggtttgacgtgaatatctttg 22110987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 1627983 - 1628041
Alignment:
Q  5 gtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatc 63  Q
    ||||| ||||||||||||||||||||||| || |||||| ||| |||||||||||||||    
T  1627983 gtgtttaagagtatttaacctatgttgtgatgaatctaaattggtttgacgtgaatatc 1628041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 18744100 - 18744038
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||| || |||||  ||| ||||||||||||||||||    
T  18744100 ggtgtttaagagtatttaacctatgttgtgatgaatctatcttggtttgacgtgaatatcttt 18744038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 17812705 - 17812629
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||||||||||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  17812705 aaatgtgtgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 17812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 8952787 - 8952869
Alignment:
Q  135 tgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||| |||||||||||||||||||||   |||||| ||| ||||||||||||| ||||||||  |||||||||| | ||||||    
T  8952787 tgtggaaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttgct 8952869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 14026409 - 14026471
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatcttt 66  Q
    |||||| ||||||||||||||||||||||  || |||||  ||| ||||||||||||||||||    
T  14026409 ggtgtttaagagtatttaacctatgttgtaatgaatctatcttggtttgacgtgaatatcttt 14026471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 10953282 - 10953214
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | ||||| |||||||||||||||||||| || ||| ||||||||||    
T  10953282 aaaatgtatgatatggaaattattattgtttataccattcaagttgttattgttgatgttgctatgttg 10953214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 22357664 - 22357747
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgtt 186  Q
    ||||||||  |||||| || || ||||||| ||||| |||||||||||||||||||||  ||||| ||||| |||||||||||||    
T  22357664 tgttgttggttaatttaagctatatatatt-atgtggaaaatgtatgatatagaaaatgttgttgtttatatcattcaagttgtt 22357747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 16062607 - 16062575
Alignment:
Q  282 gttgttgtcaatgtcgttaaagttgtaagttga 314  Q
    ||||| |||||||||||||||||||||||||||    
T  16062607 gttgtcgtcaatgtcgttaaagttgtaagttga 16062575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 21618740 - 21618826
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagtt 183  Q
    ||||| || |||||| |||||||||| || ||||||| ||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||    
T  21618740 tgaatattcttgttggataatttgagataaatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagtt 21618826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 5315 - 5610
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5315 ggtgtttaagagtatttaaactatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 5414  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  5415 gttgttgaataatttgagttacatatatttatgtggaaaaagtatgatatagaaaataatgttgttataccattcaagttgttattattaatgttgctat 5514  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttg 288  Q
              |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  5515 gttgtgaagttgttgtatgttgttgtctctgctgtattgattattaaatcattaagttgcatatgttggtcaagttgtttaagttgtaagatgttg 5610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 1 - 318
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  1 tgtttaagggtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgtaggatcatttgaaatacatatattatgtgaatgttgt 100  T
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta--- 202  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       
T  101 tgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccatttaagttgttattattaatgatgctatgt 200  T
Q  203 --------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatg 294  Q
            |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  201 tgtgaaattgttgtatgttgttgtctctactgtattgattattaaatcattaagttgcatatgttggtcatgtt-ttaaagttgtaagttgttgtcaatg 299  T
Q  295 tcgttaaagttgtaagttg 313  Q
    | ||||||||| |||||||    
T  300 tagttaaagttttaagttg 318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 58198 - 57902
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||| ||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  58198 ggtgtttaagagtatttaacctgtgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 58099  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  58098 gttgttgaagaatttgagttacatatatttatgtggaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 57999  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
              |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||    
T  57998 gtcgtgaagttgttgtatgttgttgtctctactgtattgattattaaatcattaagttgcatatgttggtctaagttgtttaagttgtaagatgttg 57902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 4 - 273
Target Start/End: Complemental strand, 615 - 335
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  615 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 516  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||     
T  515 gttgttgaataatttgagttacatatatttatatggaaaaggtatgatatagaaaataacgtttttataccattcaagttgttattattaatgatgatat 416  T
Q  203 ----------tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgttaa 273  Q
              ||||||| |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  415 gttgtgaagttgttgtacgttgttgtctctactgtattgattattaaatcattaagttgcatatgttggtcaagttgttaa 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 7987 - 8192
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7987 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaacatctttgttggataatttgaaatacatatattatgtgaatgtt 8086  T
Q  104 gttgttgaataatttgagttacatatatttatgt-gaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 202  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8087 gttgttgaataatttgagttacatatatttatgtggaaaaaggtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta 8186  T
Q  203 tgttgt 208  Q
    ||||||    
T  8187 tgttgt 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 9828 - 10032
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9828 ggtgtttaagagtatttaacctatattgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 9927  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  9928 gttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttgtaccattcaagttgttattattaattatgctat 10027  T
Q  204 gttgt 208  Q
    |||||    
T  10028 gttgt 10032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 8905 - 9106
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||||| ||||  |||| ||||||||||||| ||||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  8905 ggtgtttaagagtatttaaactataatgtgatggatctaatttggtttgacgtgaatatctttgttagatagtttgaaatacatatattatgtgaatgtt 9004  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctat 203  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9005 gttgttgaataaattgagttacatatatttatgtggaaaatgtatgatatagaaaataatgttgttatatcattcaagttgttattattaatgatgctat 9104  T
Q  204 gt 205  Q
    ||    
T  9105 gt 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 11245 - 10975
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||||||||||||| || |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  11245 ggtgtttaagagtatctaacctatgttgtgatgaatctaatttggtttgacgtgaatagctttgttggataatttgaaatacatatattatgtgaatgtt 11146  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||| |||||||| ||||||||| | ||||||| |||| ||||||||||||||||||||  |||| ||||||||||||| |||||     
T  11145 gttgttgaataatttgagatacatata-ttatgtgaatattgtatgacatag-aaataatgttgttataccatcgaagtggttattattaatgttgctat 11048  T
Q  203 ---------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
             |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11047 gattcaagttgttgtatgttgctttctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 10975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 7425 - 7155
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||  |||||||| |||| || |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7425 ggtgtttaagagtatcaaacctatgctgtgatgaatctaatttggtctgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 7326  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||| |||||| | ||||||||| | |||||||||| | |||||||||||||||||||| ||||| ||||||||||||| |||||     
T  7325 gttgttgaataatttgagatacata-aattatgtgaatattgtatgatat-ggaaataatgttgttataccatccaagtggttattattaatgttgctat 7228  T
Q  203 ---------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7227 gattcaagttgttgtatgttgctgtctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 7155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 579 - 849
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||||||||||||| || |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  579 ggtgtttaagagtatctaacctatgttgtgatgaatctaatttggtttgacgtgaatagctttgttggataatttgaaatacatatattatgtgaatgtt 678  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||| |||||||| ||||||||| | ||||||| |||| ||||||||||||||||||||  |||| ||||||||||||| |||||     
T  679 gttgttgaataatttgagatacatata-ttatgtgaatattgtatgacatag-aaataatgttgttataccatcgaagtggttattattaatgttgctat 776  T
Q  203 ---------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
             |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  777 gattcaagttgttgtatgttgctttctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 5882 - 6152
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||  |||||||| |||| || |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5882 ggtgtttaagagtatcaaacctatgctgtgatgaatctaatttggtctgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 5981  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||| |||||| | ||||||||| | |||||||||| | |||||||||||||||||||| ||||| ||||||||||||| |||||     
T  5982 gttgttgaataatttgagatacata-aattatgtgaatattgtatgatat-ggaaataatgttgttataccatccaagtggttattattaatgttgctat 6079  T
Q  203 ---------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6080 gattcaagttgttgtatgttgctgtctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 28 - 265
Target Start/End: Complemental strand, 33776 - 33530
Alignment:
Q  28 gttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacat 127  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  33776 gttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatacattatgtgaatgttgttgttgaataatttgagatacat 33677  T
Q  128 atatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta----------tgttgtatgttgctg 217  Q
    ||| ||||||||| | |||||||||||| |||||||||||||||||||| ||||| ||||||||||||| |||||          |||||||||||| ||    
T  33676 ata-ttatgtgaatattgtatgatatag-aaataatgttgttataccatccaagtggttattattaatgttgctatgattcaagttgttgtatgttgatg 33579  T
Q  218 tctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33578 tctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 33530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 6 - 288
Target Start/End: Complemental strand, 146180 - 145889
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||| |||||||||||| |||||||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  146180 tgtttaagagtatttaatctatgttgtgatggatctaattgg-tttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgt 146082  T
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta--- 202  Q
    |||||| ||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||||| ||| ||||| ||||||||||||| |||||       
T  146081 tgttgattaatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttatatcatccaagtggttattattaatgttgctacgg 145984  T
Q  203 -------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttg 288  Q
           |||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||    
T  145983 ttcaagttgttgtatgttgttgtcattgttgttattgattattaaatcattaagttgcatatgttggtctaagttgtttaagttgtaagatgttg 145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 49 - 289
Target Start/End: Original strand, 15156 - 15405
Alignment:
Q  49 tttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtat 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | |||||    
T  15156 tttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttgttgaataatttgagatacatata-ttatgtgaatattgtat 15254  T
Q  149 gatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta----------tgttgtatgttgctgtctctgttg-tattgattatt 237  Q
    ||||||| |||||||||| ||||||||| ||||| ||||||||||||| |||||          |||||||||||| ||||||||||| |||||||||||    
T  15255 gatatag-aaataatgtttttataccatccaagtggttattattaatgttgctatgattcaagttgttgtatgttgatgtctctgttgttattgattatt 15353  T
Q  238 aaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgt 289  Q
    |||||||||||||||||||||||||||| ||  | |||||||||||||||||    
T  15354 aaatcattaagttgcatatgttggtcaaatttgtcaagtcgtaagttgttgt 15405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 9397 - 9564
Alignment:
Q  38 atctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatttatgt 137  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  9397 atctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt---gttgaataatttgagttacatatatttatgt 9493  T
Q  138 gaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgt 208  Q
    | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9494 ggaaaaggtatgatatagaaaataatgttgttatacctttcaagttgttattattaatgatgctatgttgt 9564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 648 - 388
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||   ||||    
T  648 aagagtatttaacctattttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattttgtgaatgtt---gttg 552  T
Q  111 aataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta-------- 202  Q
    ||||||||||| |||||||| ||||||||| | |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||| | |||            
T  551 aataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatattgttataccatccaagtggttattattaatgtttctatgattcaa 454  T
Q  203 --tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
      |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  453 gttgttgtatattggtgtctctgttgttattgattattaaatcattaagttgcatatgttggtcaa 388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 129; Significance: 9e-67; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 22508 - 22322
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||||||||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22508 ggtgtttaagagtatctaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 22409  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattatt 192  Q
    |||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  22408 gttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttataccatccaagtggttattatt 22322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 140 - 313
Target Start/End: Complemental strand, 23710 - 23526
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgt-----------atgttgctgtctctgttgta 228  Q
    |||| ||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||           |||||| ||||||  |||||    
T  23710 aaaaggtatgatgtagaaaataatgttgttataccatttaagttgttatcattaatgatgctatgttgtgaaattgttgtatgttgttgtctcaattgta 23611  T
Q  229 ttgattattaaatcattaagttgcatatgttggtcaagttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  23610 ttgattattaaatcattaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttttaagttg 23526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 126; Significance: 6e-65; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 11609 - 11340
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||||| |||||||||||| ||||||||||| | |||||||| |||||||||| | | |||||||||||||||||||||| ||||||||    
T  11609 ggtgtttaagagtatttgacctatgttgtgatggatctaattgg-tttgacgtaaatatctttgctagataatttgaaatacatatattatatgaatgtt 11511  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta- 202  Q
    |||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||||||||| ||| | ||||||||||||| |||||     
T  11510 gttgttgaataatttgaggtacatata-ttatgtgaatattgtatgatatag-aaataatgttgttataccatccaaatggttattattaatgttgctat 11413  T
Q  203 ---------tgttgtatgttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
             |||||||||||| ||||| || || |||||||| ||||||||||||||||||||||||||||||    
T  11412 ggttcaagttgttgtatgttgttgtctgtgctgttattgattgttaaatcattaagttgcatatgttggtcaa 11340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 3861 - 3768
Alignment:
Q  12 agagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  3861 agagtatttaacctatgttgtgatggatctaatttcgtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatattgt 3768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 3808 - 3718
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatg 196  Q
    |||||| |||||||||  |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| ||||||||||||| || ||||||    
T  3808 ttgttggataatttgaaatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttgttaatg 3718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 78514 - 78322
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  78514 ggtgttaaagagtatttaacctatgttgtgatgaatctaattgg-tttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 78416  T
Q  104 gtt---gttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatg 196  Q
    |||   ||||||||||||||| |||||||| ||||||||| | |||||| ||||| |||||||||||||||||||| ||||| |||||||||||||    
T  78415 gttgttgttgaataatttgagatacatata-ttatgtgaatattgtatggtatag-aaataatgttgttataccatccaagtggttattattaatg 78322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 29608 - 29442
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| |||||||| |||||||||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29608 ggtgtttaagagtatctaacctatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 29509  T
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttata 172  Q
    |||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  29508 gttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttata 29442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 10541 - 10787
Alignment:
Q  13 gagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttgaa 112  Q
    |||||||||||||| |||||| ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  10541 gagtatttaacctacgttgtgatggatctaattgg-tttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgttgttattgaa 10639  T
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaa--aataatgttgttataccattcaagttgttattattaatgatgctatgttgtat 210  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||||  ||| |||  |||||   ||| | |||| ||| ||| | |      ||||||||    
T  10640 taatttgagatacatata-ttatgtgaatattgtatgatatagaaataatgatgcggttat--tattaatgttgctatgattgaag-----ttgttgtat 10731  T
Q  211 gttgctgtctctgttg-tattgattattaaatcattaagttgcatatgttggtcaa 265  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  10732 gttgttgtctctgctgttattgattattaaatcattaagttgcatatgttggtcaa 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 30062 - 29894
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaa---t 100  Q
    |||||| |||||||| |||| ||||||||| || |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||   |    
T  30062 ggtgtttaagagtatctaacttatgttgtgatgaatctaatttggtttgacgtgaatatctttgttggataa-ttgaaatacatatattatgtgaatgtt 29964  T
Q  101 gttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttata 172  Q
    ||||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  29963 gttgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgttata 29894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 289
Target Start/End: Original strand, 47280 - 47466
Alignment:
Q  113 taatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgcta---------- 202  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||              
T  47280 taatttgggttacatatatttatgtggaaaaggtatgatatagaaaa-aatgttgttataccattcaagttgttataattaatgatgctatgttgtgaag 47378  T
Q  203 -tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
     |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||    
T  47379 ttgttgtatgttgttgtctctactgtattgattattaaatcattaagttgcatatgttggtcaaagttg-tcaagttgtaagttgttgt 47466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 28603 - 28532
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatg 196  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  28603 tacatatatt-atgtgaaaa-tgtatgatacagaaactaatgttgttatatcattcaagttgttattattaatg 28532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 82; Significance: 1e-38; HSPs: 4)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 7662 - 7542
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  7662 aagagtatttaacctatgttgtgatggatctaattgg-tttgatgtgaatatctttgttggagaatttgaaatacatatattatatgaatgttgttgttg 7564  T
Q  111 aataatttgagttacatatatt 132  Q
    ||||||||||| ||| ||||||    
T  7563 aataatttgaggtacgtatatt 7542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 14293 - 14173
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgttgttg 110  Q
    ||||||||||||||||||||||| ||||||||||| | ||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  14293 aagagtatttaacctatgttgtgatggatctaattgg-tttgatgtgaatatctttgttggagaatttgaaatacatatattatatgaatgttgttgttg 14195  T
Q  111 aataatttgagttacatatatt 132  Q
    ||||||||||| ||| ||||||    
T  14194 aataatttgaggtacgtatatt 14173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 16630 - 16575
Alignment:
Q  77 ttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatt 132  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||    
T  16630 ttgaaatacatatattatatgaatgttgttgttgaataatttgtggtacgtatatt 16575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 18650 - 18595
Alignment:
Q  77 ttgaaatacatatattatgtgaatgttgttgttgaataatttgagttacatatatt 132  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||    
T  18650 ttgaaatacatatattatatgaatgttgttgttgaataatttgtggtacgtatatt 18595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 1161 - 1062
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1161 ggtgtttaagtgtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 919 - 830
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| | ||| ||||| |||||||||||||    
T  919 tgaatattgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattattgtttatatcattcaagttgtt 830  T

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Target: scaffold0005 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 187107 - 187206
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  187107 ggtgtttaagtgtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgtgaatgtt 187206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 187349 - 187438
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgtt 186  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| | ||| ||||| |||||||||||||    
T  187349 tgaatattgttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattattgtttatatcattcaagttgtt 187438  T

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Target: scaffold0098 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 39547 - 39449
Alignment:
Q  6 tgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttg 104  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  39547 tgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatatgaatgttg 39449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 1069 - 1170
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  1069 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaatatt 1168  T
Q  104 gt 105  Q
    ||    
T  1169 gt 1170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 1130 - 1210
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  1130 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 15188 - 15289
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  15188 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaatatt 15287  T
Q  104 gt 105  Q
    ||    
T  15288 gt 15289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 105
Target Start/End: Original strand, 24246 - 24347
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  24246 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggtttgacgtgaatatctttgttggataatttgagatacatatattatgtgaatatt 24345  T
Q  104 gt 105  Q
    ||    
T  24346 gt 24347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 15249 - 15329
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  15249 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 15329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 186
Target Start/End: Original strand, 24307 - 24387
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||| |||||||||| |||||||||| ||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  24307 ttgttggataatttgagatacatatatt-atgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 24387  T

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Target: scaffold0017 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 25966 - 25865
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgtt 103  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||| | || |||||||||||||| |||||||||||||||||||||||||||||||    
T  25966 ggtgtttaagagtatttaacctatgttgtgatggatctaatttggttttatgtaaatatctttgttggataatttgaaatacatatattatgtgaatgtt 25867  T
Q  104 gt 105  Q
    ||    
T  25866 gt 25865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 168879 - 168786
Alignment:
Q  12 agagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  168879 agagtatttaacttatgttgtgatggttctaatttggtttgacgtgaatatctttgttggataatttgaaatacatatattatgttaatattgt 168786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 289
Target Start/End: Complemental strand, 1327 - 1172
Alignment:
Q  144 tgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatg----------ttgtatgttgctgtctctgttgt-attga 232  Q
    ||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||          |||||||||||||||| || ||| |||||    
T  1327 tgtatgatatagaaa-taatgttgttataccatccaagtggttattattaatgttgctatgattcaagttgttgtatgttgctgtctgtgctgttattga 1229  T
Q  233 ttattaaatcattaagttgcatatgttggtc-aagttgttaaagtcgtaagttgttgt 289  Q
    ||||||||||||||||||||||||||||||| |||||| | |||| ||||||||||||    
T  1228 ttattaaatcattaagttgcatatgttggtcaaagttg-tcaagttgtaagttgttgt 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 103 - 207
Target Start/End: Original strand, 34097 - 34201
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||| ||||    
T  34097 tgttgttggttaatttgagttacatatatt-atgtggaaaatgtatgatatagaagatattgttgtttatatcattcaagttgttattattaatgttgct 34195  T
Q  202 atgttg 207  Q
    ||||||    
T  34196 atgttg 34201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 1720 - 1653
Alignment:
Q  203 tgttgtatgttgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgt 270  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1720 tgttgtattttgctatctctgttgtattgattattaaatcattaagttgcatatgttggtcaagttgt 1653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 584 - 679
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaa 99  Q
    |||||| ||||| |||||| |||||||||| |||| |||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  584 ggtgtttaagagaatttaatctatgttgtgatggacctaatttggtttgacgtgagtatctttgttggataatttgagatacatatattatgtgaa 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 5888 - 5983
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaa 99  Q
    |||||| ||||| |||||| |||||||||| |||| |||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  5888 ggtgtttaagagaatttaatctatgttgtgatggacctaatttggtttgacgtgagtatctttgttggataatttgagatacatatattatgtgaa 5983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 645 - 745
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatg 204  Q
    |||||| |||||||||| |||||||||| |||||||||  |||||||||||||||||||||||||||| ||| ||||||||  ||||||| | |||||||    
T  645 ttgttggataatttgagatacatatatt-atgtgaaaag-gtatgatatagaaaataatgttgttatatcatccaagttgtagttattaacgttgctatg 742  T
Q  205 ttg 207  Q
    |||    
T  743 ttg 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 5949 - 6049
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatg 204  Q
    |||||| |||||||||| |||||||||| |||||||||  |||||||||||||||||||||||||||| ||| ||||||||  ||||||| | |||||||    
T  5949 ttgttggataatttgagatacatatatt-atgtgaaaag-gtatgatatagaaaataatgttgttatatcatccaagttgtagttattaacgttgctatg 6046  T
Q  205 ttg 207  Q
    |||    
T  6047 ttg 6049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 6956 - 6862
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  6956 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 6862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 6902 - 6840
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  6902 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 6840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 7116 - 7207
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgt 102  Q
    ||||||||||||||||||||||| |  |||| |||||  ||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  7116 aagagtatttaacctatgttgtgataaatctcatttggattgacatgaatatctttgttggataatttgaaatacatatattatatgaatgt 7207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 21092 - 21001
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  21092 agtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 21001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 21041 - 20979
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| |||||||||||||    
T  21041 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaataatgttgtt 20979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 127500 - 127589
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattat 191  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  127500 ttgttgttggttaatttgagctacatatatt-atgtgaaaaatgtatgatatagaaaatattgttgttcatatcattcaagttgttattat 127589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 21511 - 21422
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    ||||||||||||| | ||||||  ||||||||||||| || |||||||||||||||||||  |||||||| |||||||||||||||||||    
T  21511 aagagtatttaacatgtgttgtaatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattatgtgaat 21422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 21457 - 21395
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | | |||||||||| |||||||||||||    
T  21457 ttgttgaataatttgagatacatata-ttatgtgaatattttatgatatag-aaataatgttgtt 21395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 265
Target Start/End: Complemental strand, 20957 - 20821
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg---------tatgttgctgtctctgttgt-a 228  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||         ||||||| ||| |||| ||| |    
T  20957 aaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttgcaagatgtttatgttgttgtttctgctgtta 20858  T
Q  229 ttgattattaaatcattaagttgcatatgttggtcaa 265  Q
    |||||||||||||||||||||||||||||||||||||    
T  20857 ttgattattaaatcattaagttgcatatgttggtcaa 20821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 5938 - 6029
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||||| | ||||||| ||||||||||||| |  |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  5938 agtatttaacatgtgttgtgatggatctaatttggtcggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 6029  T

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Target: scaffold0575; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 5989 - 6051
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||| | |||||||||||    
T  5989 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-acataatgttgtt 6051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 13274 - 13357
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattat 94  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| |||||||||||||    
T  13274 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattat 13357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 13328 - 13390
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt 169  Q
    ||||||||||||||||| |||||||| |||| |||  | |||||||||||| |||||||||||||    
T  13328 ttgttgaataatttgagatacatata-ttatttgatgattgtatgatatag-aaataatgttgtt 13390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 120353 - 120270
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattat 94  Q
    ||||||||||||| | ||||||| ||||||||||||| || |||||||||||||||||||  |||||||| |||||||||||||    
T  120353 aagagtatttaacatgtgttgtgatggatctaatttggttggacgtgaatatctttgttgaataatttgagatacatatattat 120270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 6966 - 6853
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || |||||||||| ||||| |||||||||||||||||||||| ||||| ||||| ||||  ||||||||||||||||| ||||    
T  6966 tgttgttggttaatttaagctacatatatt-atgtggaaaatgtatgatatagaaaatattgttgtttatatcatttgagttgttattattaatgttgct 6868  T
Q  202 atgttgtatgttgct 216  Q
    |||||| | ||||||    
T  6867 atgttgcaagttgct 6853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 3708 - 3619
Alignment:
Q  16 tatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||| | ||||||| ||||||||||||| |  |||||||||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  3708 tatttaacatgtgttgtgatggatctaatttggtcggacgtgaatatctttgttgaataatttgagatacatatattatgtgaatattgt 3619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 3659 - 3609
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatataga 156  Q
    ||||||||||||||||| |||||||| ||||||||| | |||||||||||||    
T  3659 ttgttgaataatttgagatacatata-ttatgtgaatattgtatgatataga 3609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 27750 - 27683
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| |||||||||||| |||||||||| |||||| |||||| |||||||||||||||||||||||    
T  27750 ggtgtttaagagtatttaatctatgttgtgatggatccaatttggtttgacgtgaatatctttgttgg 27683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 27488 - 27444
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    |||||||| |||||||||||||||||| |||||||||||||||||    
T  27488 gttaaagttgtaagttgttgtcaatgtagttaaagttgtaagttg 27444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 370 - 456
Alignment:
Q  131 tttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||||||||||||||||||||||||| ||  |||||| ||| ||||||||||||||||||||||  |||||||||| | ||||||    
T  370 tttatgtgaaaaatgtatgatatagaaagtatcgttgtttatatcattcaagttgttattattaatattgctatgttgcaagttgct 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 62581 - 62639
Alignment:
Q  13 gagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  62581 gagtatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 62639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 11022 - 10918
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||||||||||||||||| ||||| ||||||||||||||| |  ||| |||| || ||| ||||||||||||||||||||||| | ||    
T  11022 tgttgttggttaatttgagttacatatatt-atgtggaaaatgtatgatatatatgatattgttctttatatcattcaagttgttattattaatgtttct 10924  T
Q  202 atgttg 207  Q
    ||||||    
T  10923 atgttg 10918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 3380 - 3277
Alignment:
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgcta 202  Q
    |||||||  |||||| || |||||||||| ||||| ||||||||||||||||||||||  |||| ||||| |||||||||||||||| |||||  |||||    
T  3380 gttgttggttaatttaagctacatatatt-atgtggaaaatgtatgatatagaaaatatcgttgtttataacattcaagttgttattgttaatattgcta 3282  T
Q  203 tgttg 207  Q
    |||||    
T  3281 tgttg 3277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 1535 - 1475
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  1535 ggtgtttaagagtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatct 1475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 66641 - 66701
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||    
T  66641 aagagtatttaacctatgttttgatggatctaacttggtttgacgtgaatatctttgttgg 66701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 59669 - 59585
Alignment:
Q  123 tacatatatttatgtgaaaaatgtatgatatagaaaataatg-ttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||| ||||| |||||||||||||||||||||| || || ||||| ||||| ||||||||||||||| | || |||||||    
T  59669 tacatatatt-atgtggaaaatgtatgatatagaaaatattgttttttatatcattcgagttgttattattaacgttgttatgttg 59585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 714 - 625
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| |||||||||||||    
T  714 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttgtt 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 705 - 665
Alignment:
Q  65 ttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  705 ttgttggataatttgagatacatatattatgtgaatattgt 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 44; Significance: 5e-16; HSPs: 4)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 10153 - 10094
Alignment:
Q  12 agagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||    
T  10153 agagtatttaacctatgttgtggtggatctaacttggtttgacatgaatatctttgttgg 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 4616 - 4677
Alignment:
Q  213 tgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaa 273  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||| ||| ||||||||||    
T  4616 tgctgtctctgctgtattgattaataaatcattaagttgcttatgttagtcaaagttgttaa 4677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 14662 - 14723
Alignment:
Q  213 tgctgtctctgttgtattgattattaaatcattaagttgcatatgttggtc-aagttgttaa 273  Q
    ||||||||||| |||| |||||| |||||||||||||||| |||||| ||| ||||||||||    
T  14662 tgctgtctctgctgtactgattaataaatcattaagttgcttatgttagtcaaagttgttaa 14723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 9852 - 9815
Alignment:
Q  270 ttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  9852 ttaaagttgtaagttgttgtcgatgtcgttaaagttgt 9815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 16584 - 16639
Alignment:
Q  16 tatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  16584 tatttaacctatgttgtgatggatctaacttggtttgacgtgaatatctttgttgg 16639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 18732 - 18795
Alignment:
Q  8 ttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||| |||| ||||||||||||||    
T  18732 ttaaagagtatttaacctatgttgtgatggatctaacttggtttaacgtaaatatctttgttgg 18795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 36118 - 36185
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||| ||||||||||||||||||||||| || |||||| ||  |||||||||||||||||||||||    
T  36118 ggtgtttaagagtatttaacctatgttgtgatgaatctaactttgtttgacgtgaatatctttgttgg 36185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 136323 - 136416
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatg 196  Q
    |||| |||| |||||||||| |||||||||| ||||||||| |||||||||||| ||||| ||||||| ||| ||||||||||||| |||||||||    
T  136323 ttgtagttggataatttgagatacatatatt-atgtgaaaattgtatgatatag-aaatattgttgttcatatcattcaagttgttgttattaatg 136416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 12253 - 12329
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||||||||||  |||||| ||| ||||||| ||||||||||||||  |||||||||| | ||||||    
T  12253 aaatgtgtgatatagaaaatatcgttgtttatatcattcaaattgttattattaatattgctatgttgcaagttgct 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 456 - 343
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    ||||||||  |||||| || || ||||||| ||||| ||||||||||||||||||||||  |||||| ||  ||||||||||||||||||||||  ||||    
T  456 tgttgttggttaatttaagctatatatatt-atgtggaaaatgtatgatatagaaaatatcgttgtttatttcattcaagttgttattattaatattgct 358  T
Q  202 atgttgtatgttgct 216  Q
    |||||| | ||||||    
T  357 atgttgcaagttgct 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 5143 - 5057
Alignment:
Q  131 tttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||||| ||||||||||||||||||| || ||||| ||||| |||||||||| |||||||||||  |||||||||| | ||||||    
T  5143 tttatgtggaaaatgtatgatatagaaagtattgttgtttatatcattcaagttattattattaatattgctatgttgcaagttgct 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 63835 - 63877
Alignment:
Q  105 ttgttgaataatttgagttacatatatttatgtgaaaaatgta 147  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  63835 ttgttgaataatttgagttacatatatttatgtgaaaaatgta 63877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 207
Target Start/End: Original strand, 3795 - 3898
Alignment:
Q  103 tgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgct 201  Q
    |||||||| |||||||||| |||||||||| ||||||| ||| |||||||||| ||||| ||||||| ||| |||||| |||||| || |||||| || |    
T  3795 tgttgttggataatttgagatacatatatt-atgtgaataatatatgatatag-aaatattgttgttcatatcattcaggttgttgttgttaatgttgtt 3892  T
Q  202 atgttg 207  Q
    ||||||    
T  3893 atgttg 3898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 7695 - 7596
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaa 194  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| ||||||| ||||| || ||||    
T  7695 tgaatgttgttgttgaataattcgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaaattgttgttgttaa 7598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 7967 - 7904
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| | |||||||||||||||||    
T  7967 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtatgacgtgaatatctttg 7904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 562 - 462
Alignment:
Q  114 aatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgt-tataccattcaagttgttattattaatgatgctatgttgtatgt 212  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||| | |||| |||| |||  |||||||||||||| ||| ||||| |||||| ||    
T  562 aatttgagctacatatatt-atgtggaaaatgtatgatatagaaaatattattgtgtatatcatctaagttgttattattcatgttgctacgttgtaagt 464  T
Q  213 tg 214  Q
    ||    
T  463 tg 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 8817 - 8717
Alignment:
Q  114 aatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgt-tataccattcaagttgttattattaatgatgctatgttgtatgt 212  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||| | |||| |||| |||  |||||||||||||| ||| ||||| |||||| ||    
T  8817 aatttgagctacatatatt-atgtggaaaatgtatgatatagaaaatattattgtgtatatcatctaagttgttattattcatgttgctacgttgtaagt 8719  T
Q  213 tg 214  Q
    ||    
T  8718 tg 8717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 6225 - 6148
Alignment:
Q  131 tttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||| ||||||||||||||||||| || ||||| ||||| |||||||||| |||||||||||  ||||||||||    
T  6225 tttatgtggaaaatgtatgatatagaaagtattgttgtttatatcattcaagttattattattaatattgctatgttg 6148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 8377 - 8300
Alignment:
Q  131 tttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||| ||||||||||||||||||| || ||||| ||||| |||||||||| |||||||||||  ||||||||||    
T  8377 tttatgtggaaaatgtatgatatagaaagtattgttgtttatatcattcaagttattattattaatattgctatgttg 8300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 8375 - 8290
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||  || ||||||| | ||||||    
T  8375 ttatgtggaaaatgtatgatatagaaaatatcgttgttattatcattcaagttgttattattaatattgatatgttgcaagttgct 8290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 1350 - 1290
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||||||    
T  1350 aagagtatttaacctatgtggtgatggatctaatttggtttgatgtgaatatccttgttgg 1290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 1272 - 1348
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||||||||||| ||||||  |||||| ||| ||||||||||||||||||||||  |||||||||||| ||||||    
T  1272 aaatgtatgatatataaaatatcgttgtttatatcattcaagttgttattattaatattgctatgttgtaagttgct 1348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 11955 - 12015
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||||||| || ||||||||| ||| |||||| ||||||||||||||||    
T  11955 aagagtatttaacctatgttttgatggatctaacttggtttgacatgaatatctttgttgg 12015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 28970 - 29030
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| || |||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  28970 ggtgtttaaaagtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatct 29030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 9505 - 9445
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| |||| |||||||||||||||||| || |||||||||| ||||||||||||||||    
T  9505 ggtgtttaagattatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatct 9445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 16381 - 16325
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    ||||||||||||||||||||||| || |||||| ||| |||||||||||||||||||    
T  16381 aagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatatctttg 16325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 2013 - 2088
Alignment:
Q  133 tatgtgaaaaatgtatgatatagaaaataatgttgttat-accattcaagttgttattattaatgatgctatgttg 207  Q
    |||||| ||||||||||| ||||||||||  |||||||| | ||||||||||||||||||||||  ||||||||||    
T  2013 tatgtggaaaatgtatgagatagaaaatatcgttgttattatcattcaagttgttattattaatattgctatgttg 2088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 21183 - 21123
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||| ||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||    
T  21183 ggtgtttaagagtatttaacctatgttgtgatgagtctaatttggtttgacgtgaatatct 21123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 143056 - 142996
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||| |||||||    
T  143056 aagagtatttaacctatgtggtgatggatctaatttggtttgatgtgaatatccttgttgg 142996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 1743 - 1654
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgtt 186  Q
    |||||||||||||||||||||||||| ||||||||  |||||||| | |||||||||||| ||||| ||||||| ||| ||||||| |||||    
T  1743 tgaatgttgttgttgaataatttgagatacatata-ctatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaaattgtt 1654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 5167 - 5104
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| | |||||||||||||||||    
T  5167 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtatgacgtgaatatctttg 5104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 5076 - 4987
Alignment:
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatg 196  Q
    |||||||||||||||| |||||||| ||||||||| | |||||||||||| ||||| ||||||| ||| |||||||||| || || ||||||    
T  5076 tgttgaataatttgagatacatata-ttatgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttattgttgttaatg 4987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 2003 - 1951
Alignment:
Q  15 gtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    ||||||||||||||||||| || |||||| ||| | |||||||||||||||||    
T  2003 gtatttaacctatgttgtgatgaatctaacttggtatgacgtgaatatctttg 1951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 1923 - 1834
Alignment:
Q  106 tgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatg 196  Q
    |||||||||||||||| |||||||| || |||||| | |||||||||||| ||||| ||||||| ||| |||||||||| || || ||||||    
T  1923 tgttgaataatttgagatacatata-ttgtgtgaatattgtatgatatag-aaatattgttgttcatatcattcaagttattgttgttaatg 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 4896 - 4839
Alignment:
Q  96 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatata 154  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||| | ||||| |||||    
T  4896 tgaatgttgttgttgattaatttgagatacatata-ttatgtgaatattgtataatata 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 313
Target Start/End: Complemental strand, 2026 - 1979
Alignment:
Q  266 gttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  2026 gttgttaaagttgtaagttgtcgtcaatgtcgttaaagttgtaagttg 1979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 7383 - 7446
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || || ||| ||| |||||||||||||||||||    
T  7383 ggtgtttaagagtatttaacctatgttgtgatgaatataacttggtttgacgtgaatatctttg 7446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 5725 - 5657
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| |||  |||||||||||||||||| ||| ||||||||||    
T  5725 aaaatgtatgatatagaaattattattgtttatataattcaagttgttattattgatgttgctatgttg 5657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 830 - 767
Alignment:
Q  151 tatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttgtatgttg 214  Q
    |||||||||||||||||||||| ||| |||| |||| ||||||||| |||||||||||| ||||    
T  830 tatagaaaataatgttgttatatcatccaagatgttgttattaatgctgctatgttgtaagttg 767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 16950 - 16846
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgc 200  Q
    ||||||||| |||||||||| |||||||||| ||||||||| ||| |||||||| ||||| | ||||| ||| |||| |||||||| ||||||||| ||     
T  16950 ttgttgttggataatttgagatacatatatt-atgtgaaaattgtttgatatag-aaatattcttgttcatatcatttaagttgttgttattaatgttgt 16853  T
Q  201 tatgttg 207  Q
    |||||||    
T  16852 tatgttg 16846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 7573 - 7523
Alignment:
Q  14 agtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatct 64  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  7573 agtatttaacctatgttgtgatgaatctaatttggtttgacgtgaatatct 7523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 3123 - 3181
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatat 62  Q
    |||||| ||||||||||||||||||||||| || |||||| ||| ||||||||||||||    
T  3123 ggtgtttaagagtatttaacctatgttgtgatgaatctaacttggtttgacgtgaatat 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 40958 - 41044
Alignment:
Q  131 tttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||||| ||||||||||||||||||| ||  |||||| ||| ||||||||||||||||||||||  || ||||||| | ||||||    
T  40958 tttatgtggaaaatgtatgatatagaaagtatcgttgtttatatcattcaagttgttattattaatattgatatgttgcaagttgct 41044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 66357 - 66253
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgc 200  Q
    |||||||||  ||||||||| |||||||||  ||||| ||| ||||||||||||||| || ||||||| ||| |||| |||||||||||||||||| ||     
T  66357 ttgttgttggttaatttgagatacatatatg-atgtggaaattgtatgatatagaaa-tattgttgttcatatcattaaagttgttattattaatgttgt 66260  T
Q  201 tatgttg 207  Q
    |||||||    
T  66259 tatgttg 66253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 15790 - 15752
Alignment:
Q  269 gttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  15790 gttaaagttgtaagttgttgtcaatgtcgttgaagttgt 15752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 3016 - 2939
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||  | |||||||| | ||||||    
T  3016 aaaatgtatgatatagaaaatatcgttgtttatatcattcaagttgttattattaatattactatgttgcaagttgct 2939  T

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Target: scaffold0429 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 2724 - 2809
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttg-ttataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||||||||||||||||||   ||| ||||| |||||||||||||||| |||||  |||||||||| | ||||||    
T  2724 ttatgtggaaaatgtatgatatagaaaatatcattgtttatatcattcaagttgttatttttaatattgctatgttgcaagttgct 2809  T

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Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 6117 - 6032
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    ||||||| ||||||| ||||||||||||||  ||||||| || ||||||||||||||||||||||  | |||||||| | ||||||    
T  6117 ttatgtggaaaatgtgtgatatagaaaatatcgttgttattatcattcaagttgttattattaatatttctatgttgcaagttgct 6032  T

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Target: scaffold1276 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 434 - 390
Alignment:
Q  56 tgaatatctttgttggctaatttgaaatacatatattatgtgaat 100  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||    
T  434 tgaatatctttgttggataatttgaaatacttatattatgtgaat 390  T

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Target: scaffold0825 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 1549 - 1613
Alignment:
Q  132 ttatgtgaaaaatgtatgatatagaaaataatgttgtta-taccattcaagttgttattattaat 195  Q
    ||||||| ||||||| ||||||||||||||  ||||||| || ||||||||||||||||||||||    
T  1549 ttatgtggaaaatgtttgatatagaaaatatcgttgttattatcattcaagttgttattattaat 1613  T

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Target: scaffold0630 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 8372 - 8304
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  8372 aaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 8304  T

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Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 7455 - 7518
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| || ||||||||||||| |||||| || |||||| ||| |||||||||||||||||||    
T  7455 ggtgtttaaaagtatttaacctaagttgtgatgaatctaacttggtttgacgtgaatatctttg 7518  T

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Target: scaffold0230; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 7672 - 7716
Alignment:
Q  266 gttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgtaag 310  Q
    ||||||||||| | ||||||| || ||||||||||||||||||||    
T  7672 gttgttaaagttgcaagttgtcgttaatgtcgttaaagttgtaag 7716  T

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Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 16071 - 16004
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| ||||||||||    
T  16071 aaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgttgctatgttg 16004  T

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Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 13253 - 13186
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| | ||||||||    
T  13253 aaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgtttctatgttg 13186  T

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Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 34715 - 34652
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||||||||||||| || |||||  ||| |||||||||| ||||||||    
T  34715 ggtgtttaagagtatttaacctatgttgtgatgaatctatcttggtttgacgtgagtatctttg 34652  T

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Target: scaffold0113; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 207
Target Start/End: Complemental strand, 34619 - 34517
Alignment:
Q  104 gttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgcta 202  Q
    ||||||| |||||||||| ||||| |||| ||||||| | | ||||||||||||| || |||| || ||| ||||||||||||| || |||||| |||||    
T  34619 gttgttggataatttgagatacatgtatt-atgtgaatattttatgatatagaaa-tattgttattcatatcattcaagttgttgttgttaatgttgcta 34522  T
Q  203 tgttg 207  Q
    |||||    
T  34521 tgttg 34517  T

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Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 53379 - 53446
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    |||||||||||||| |||| || | || ||||| ||||||||||||||||||| ||| ||||||||||    
T  53379 aaaatgtatgatatggaaattattatttttatatcattcaagttgttattattgatgttgctatgttg 53446  T

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Target: scaffold0859 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 4033 - 3984
Alignment:
Q  56 tgaatatctttgttggctaatttgaaatacatatattatgtgaatgttgt 105  Q
    |||||||  ||||||| |||||||||||||||||||||||||||| ||||    
T  4033 tgaatattgttgttggataatttgaaatacatatattatgtgaatattgt 3984  T

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Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 3188 - 3111
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||||||||||||||||||   |||||| ||| ||||||||||||| ||||||||  |||||||||| | ||||||    
T  3188 aaaatgtatgatatagaaaatgtcgttgtttatatcattcaagttgttgttattaatattgctatgttgcaagttgct 3111  T

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Target: scaffold0639 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 7198 - 7258
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    |||||||||||||||| || ||| ||||||||||||| ||| | ||||||||| |||||||    
T  7198 aagagtatttaacctacgtggtgatggatctaatttggtttcatgtgaatatccttgttgg 7258  T

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Target: scaffold0507 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 2443 - 2503
Alignment:
Q  11 aagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttgttgg 71  Q
    ||||||||||||||||  | ||| ||||||||||||| ||||| ||||||||| |||||||    
T  2443 aagagtatttaacctaaatggtgatggatctaatttggtttgatgtgaatatccttgttgg 2503  T

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Target: scaffold0445 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 2652 - 2727
Alignment:
Q  116 tttgagttacatatatttatgtgaaaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattat 191  Q
    |||||| |||||||||| ||||| ||| |||||||||||||||||| ||||||| ||| ||||||| | ||||||||    
T  2652 tttgagatacatatatt-atgtggaaattgtatgatatagaaaatattgttgttcatatcattcaaatcgttattat 2727  T

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Target: scaffold0328 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 19388 - 19456
Alignment:
Q  140 aaaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||||||||||||| || | ||||| ||| ||||||||||||||||||| ||| | ||||||||    
T  19388 aaaatgtatgatatagaaattattattgtttatatcattcaagttgttattattgatgtttctatgttg 19456  T

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Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 20730 - 20785
Alignment:
Q  102 ttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaa 158  Q
    |||| |||| |||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20730 ttgtagttggataatttgagatacatatatt-atgtgaaaattgtatgatatagaaa 20785  T

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Target: scaffold0213 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 18615 - 18552
Alignment:
Q  4 ggtgttaaagagtatttaacctatgttgtgttggatctaatttgatttgacgtgaatatctttg 67  Q
    |||||| ||||||||||||| ||||||||| || |||||  | | |||||||||||||||||||    
T  18615 ggtgtttaagagtatttaacatatgttgtgatgaatctatctcggtttgacgtgaatatctttg 18552  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 313
Target Start/End: Complemental strand, 61938 - 61907
Alignment:
Q  282 gttgttgtcaatgtcgttaaagttgtaagttg 313  Q
    ||||||||||||||||||||||||||||||||    
T  61938 gttgttgtcaatgtcgttaaagttgtaagttg 61907  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 127164 - 127226
Alignment:
Q  145 gtatgatatagaaaataatgttgttataccattcaagttgttattattaatgatgctatgttg 207  Q
    ||||||||  |||||||||||| ||||| ||| ||||||||| ||||||| | ||||||||||    
T  127164 gtatgatagggaaaataatgttattatatcatccaagttgttgttattaaagttgctatgttg 127226  T

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Target: scaffold0174 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 15211 - 15170
Alignment:
Q  266 gttgttaaagtcgtaagttgttgtcaatgtcgttaaagttgt 307  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  15211 gttgttaaagttgtaagttgttgtcgatgtcgttgaagttgt 15170  T

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Target: scaffold0338 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 3688 - 3764
Alignment:
Q  141 aaatgtatgatatagaaaataatgttgtt-ataccattcaagttgttattattaatgatgctatgttgtatgttgct 216  Q
    |||||| ||||||||||||||  |||||| ||| |||| |||||||||||| ||||  |||||||||| | ||||||    
T  3688 aaatgtgtgatatagaaaatatcgttgtttatatcatttaagttgttattactaatattgctatgttgcaagttgct 3764  T

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