View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_12 (Length: 464)

Name: NF8912A_low_12
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_12
NF8912A_low_12
[»] chr5 (36 HSPs)
chr5 (151-462)||(38816628-38816932)
chr5 (286-361)||(19820428-19820503)
chr5 (312-441)||(22423764-22423895)
chr5 (286-353)||(22013364-22013431)
chr5 (286-360)||(42469171-42469245)
chr5 (311-360)||(15410483-15410532)
chr5 (308-360)||(6326332-6326384)
chr5 (284-409)||(37328829-37328955)
chr5 (325-409)||(3966492-3966577)
chr5 (301-359)||(15382442-15382500)
chr5 (325-358)||(6035472-6035505)
chr5 (394-443)||(8420075-8420124)
chr5 (308-361)||(21191090-21191143)
chr5 (286-353)||(2436878-2436939)
chr5 (389-441)||(9929668-9929720)
chr5 (325-361)||(17123037-17123073)
chr5 (308-352)||(21522722-21522766)
chr5 (308-352)||(21533288-21533332)
chr5 (325-361)||(27144452-27144488)
chr5 (286-361)||(6247572-6247647)
chr5 (325-409)||(11685928-11686012)
chr5 (318-361)||(14674251-14674294)
chr5 (318-361)||(19579683-19579726)
chr5 (301-360)||(21137654-21137713)
chr5 (318-361)||(34879332-34879375)
chr5 (318-360)||(5873548-5873590)
chr5 (413-443)||(24906250-24906280)
chr5 (330-360)||(27932229-27932259)
chr5 (327-361)||(28588708-28588742)
chr5 (308-354)||(36642803-36642849)
chr5 (312-361)||(19552577-19552626)
chr5 (286-359)||(30135264-30135336)
chr5 (334-363)||(32766975-32767004)
chr5 (301-361)||(13287433-13287493)
chr5 (325-361)||(31084312-31084348)
chr5 (325-409)||(41995460-41995543)
[»] chr7 (38 HSPs)
chr7 (286-360)||(27944991-27945065)
chr7 (286-360)||(24105629-24105702)
chr7 (329-411)||(29787354-29787435)
chr7 (308-361)||(11722132-11722185)
chr7 (299-409)||(24339605-24339716)
chr7 (311-392)||(19206025-19206107)
chr7 (325-409)||(32308109-32308194)
chr7 (331-441)||(11700798-11700909)
chr7 (301-361)||(1433419-1433479)
chr7 (281-441)||(7328639-7328805)
chr7 (286-357)||(2034392-2034462)
chr7 (310-361)||(2425767-2425818)
chr7 (286-361)||(43027503-43027578)
chr7 (301-360)||(43249958-43250017)
chr7 (319-361)||(8046061-8046103)
chr7 (325-392)||(22484014-22484082)
chr7 (319-361)||(23191879-23191921)
chr7 (311-361)||(26733279-26733329)
chr7 (330-404)||(30731031-30731104)
chr7 (328-401)||(11072290-11072362)
chr7 (310-359)||(49107795-49107844)
chr7 (325-361)||(20549780-20549816)
chr7 (322-361)||(2948669-2948708)
chr7 (325-409)||(6630897-6630982)
chr7 (318-361)||(21828439-21828482)
chr7 (329-360)||(28155563-28155594)
chr7 (287-361)||(598160-598233)
chr7 (310-360)||(5235960-5236010)
chr7 (343-409)||(9933282-9933347)
chr7 (319-361)||(20545270-20545312)
chr7 (301-359)||(26329418-26329476)
chr7 (310-359)||(4017830-4017879)
chr7 (413-442)||(17852091-17852120)
chr7 (325-358)||(25791642-25791675)
chr7 (309-361)||(11061110-11061162)
chr7 (413-441)||(15680900-15680928)
chr7 (301-361)||(17851396-17851456)
chr7 (325-361)||(22868031-22868067)
[»] chr6 (45 HSPs)
chr6 (308-409)||(10294079-10294181)
chr6 (301-361)||(9027143-9027203)
chr6 (286-361)||(853893-853968)
chr6 (301-409)||(16766662-16766771)
chr6 (301-361)||(5000660-5000720)
chr6 (301-441)||(5732474-5732604)
chr6 (286-354)||(8365560-8365628)
chr6 (288-360)||(12696277-12696348)
chr6 (311-441)||(8805524-8805656)
chr6 (301-409)||(9107355-9107464)
chr6 (310-361)||(9629357-9629408)
chr6 (286-361)||(30866178-30866253)
chr6 (286-360)||(6389693-6389767)
chr6 (311-361)||(9658854-9658904)
chr6 (323-361)||(19040339-19040377)
chr6 (286-354)||(3398569-3398637)
chr6 (301-361)||(7938081-7938141)
chr6 (312-360)||(13851712-13851760)
chr6 (301-360)||(7977865-7977924)
chr6 (318-361)||(20371144-20371187)
chr6 (301-404)||(34073337-34073441)
chr6 (308-361)||(426548-426601)
chr6 (320-361)||(7265627-7265668)
chr6 (309-361)||(8777007-8777059)
chr6 (301-361)||(34595099-34595159)
chr6 (394-441)||(426478-426525)
chr6 (318-361)||(17841623-17841666)
chr6 (309-392)||(31579229-31579311)
chr6 (286-360)||(25038106-25038180)
chr6 (287-361)||(31959111-31959184)
chr6 (413-443)||(34073276-34073306)
chr6 (400-441)||(2117134-2117175)
chr6 (328-361)||(10842524-10842557)
chr6 (311-405)||(26562664-26562759)
chr6 (325-361)||(677826-677862)
chr6 (286-359)||(4877890-4877965)
chr6 (285-361)||(7930254-7930330)
chr6 (325-361)||(7996412-7996448)
chr6 (325-361)||(8022353-8022389)
chr6 (325-361)||(10339160-10339196)
chr6 (309-361)||(16833281-16833333)
chr6 (325-361)||(17341698-17341734)
chr6 (328-360)||(21395342-21395374)
chr6 (325-361)||(21424836-21424872)
chr6 (325-409)||(34290064-34290147)
[»] chr8 (22 HSPs)
chr8 (308-409)||(22651948-22652050)
chr8 (303-409)||(29510289-29510396)
chr8 (286-354)||(25192388-25192456)
chr8 (295-361)||(926822-926888)
chr8 (308-361)||(27213519-27213572)
chr8 (286-354)||(126390-126457)
chr8 (286-361)||(13436998-13437073)
chr8 (318-361)||(31109552-31109595)
chr8 (299-361)||(24362236-24362298)
chr8 (328-361)||(39954313-39954346)
chr8 (321-361)||(31236611-31236651)
chr8 (318-394)||(37283812-37283887)
chr8 (286-361)||(4298920-4298994)
chr8 (286-361)||(11944615-11944690)
chr8 (299-361)||(4673459-4673521)
chr8 (327-361)||(27101506-27101540)
chr8 (319-361)||(34897068-34897110)
chr8 (286-404)||(11927076-11927195)
chr8 (328-361)||(13844630-13844663)
chr8 (301-361)||(2572090-2572150)
chr8 (309-361)||(20873042-20873094)
chr8 (313-409)||(29776013-29776108)
[»] chr2 (34 HSPs)
chr2 (286-397)||(21782817-21782927)
chr2 (286-350)||(33519736-33519800)
chr2 (286-361)||(20539708-20539783)
chr2 (301-392)||(4332891-4332981)
chr2 (311-361)||(21616737-21616787)
chr2 (286-359)||(19536434-19536507)
chr2 (285-358)||(23717976-23718048)
chr2 (285-358)||(24105648-24105720)
chr2 (334-392)||(1327976-1328033)
chr2 (311-409)||(36409614-36409711)
chr2 (301-386)||(18276486-18276570)
chr2 (287-352)||(21624217-21624282)
chr2 (328-441)||(19573970-19574078)
chr2 (336-409)||(44860320-44860394)
chr2 (323-411)||(18420417-18420506)
chr2 (394-441)||(19536361-19536408)
chr2 (326-361)||(37411278-37411313)
chr2 (287-361)||(38117193-38117261)
chr2 (285-359)||(14996260-14996333)
chr2 (394-440)||(18255945-18255991)
chr2 (285-360)||(21374734-21374810)
chr2 (301-391)||(28412315-28412404)
chr2 (303-361)||(31018557-31018615)
chr2 (394-440)||(34691770-34691816)
chr2 (394-440)||(34714182-34714228)
chr2 (285-406)||(2331743-2331863)
chr2 (299-360)||(4142875-4142936)
chr2 (319-360)||(21091706-21091747)
chr2 (325-361)||(896200-896236)
chr2 (312-360)||(10535794-10535842)
chr2 (309-361)||(30404884-30404936)
chr2 (329-361)||(31284041-31284073)
chr2 (405-441)||(42511322-42511358)
chr2 (328-360)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (285-361)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (286-441)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (285-361)||(21902-21978)
[»] chr1 (38 HSPs)
chr1 (309-361)||(6427323-6427375)
chr1 (301-361)||(40917716-40917776)
chr1 (302-361)||(398799-398858)
chr1 (309-361)||(2896155-2896207)
chr1 (294-440)||(10572535-10572690)
chr1 (285-360)||(5376535-5376609)
chr1 (286-361)||(5927374-5927449)
chr1 (388-441)||(48547938-48547991)
chr1 (317-361)||(12443494-12443538)
chr1 (325-361)||(17831565-17831601)
chr1 (325-361)||(36878450-36878486)
chr1 (308-400)||(1486703-1486796)
chr1 (301-401)||(38503285-38503386)
chr1 (340-443)||(44482234-44482343)
chr1 (299-354)||(48040503-48040558)
chr1 (308-386)||(1262856-1262933)
chr1 (311-361)||(9709795-9709845)
chr1 (311-361)||(34298411-34298461)
chr1 (286-360)||(39130802-39130876)
chr1 (325-361)||(19562655-19562691)
chr1 (325-360)||(609493-609528)
chr1 (318-361)||(6415035-6415078)
chr1 (286-361)||(31014993-31015068)
chr1 (318-361)||(46348417-46348460)
chr1 (309-360)||(48450622-48450673)
chr1 (325-359)||(3490426-3490460)
chr1 (327-361)||(10475011-10475045)
chr1 (295-361)||(15641064-15641130)
chr1 (325-363)||(40285686-40285724)
chr1 (308-361)||(20157384-20157437)
chr1 (328-361)||(21530681-21530714)
chr1 (331-409)||(25361881-25361960)
chr1 (331-360)||(41877505-41877534)
chr1 (328-409)||(9828036-9828118)
chr1 (301-361)||(10577769-10577829)
chr1 (318-354)||(18556497-18556533)
chr1 (328-392)||(25452152-25452215)
chr1 (286-346)||(34315663-34315722)
[»] chr3 (38 HSPs)
chr3 (286-361)||(8383207-8383282)
chr3 (299-398)||(5441029-5441128)
chr3 (322-411)||(8039818-8039908)
chr3 (301-360)||(24205076-24205135)
chr3 (286-352)||(8842280-8842346)
chr3 (317-382)||(5407261-5407325)
chr3 (301-361)||(28917966-28918026)
chr3 (301-360)||(4991002-4991061)
chr3 (295-354)||(10335327-10335386)
chr3 (286-409)||(25064859-25064981)
chr3 (286-361)||(55401025-55401100)
chr3 (287-361)||(8587055-8587129)
chr3 (310-360)||(9800014-9800064)
chr3 (287-361)||(32429414-32429488)
chr3 (309-361)||(2620087-2620139)
chr3 (301-361)||(15796328-15796388)
chr3 (309-361)||(26492239-26492291)
chr3 (318-357)||(21720746-21720785)
chr3 (405-443)||(4466538-4466576)
chr3 (413-443)||(5440965-5440995)
chr3 (311-361)||(12674535-12674585)
chr3 (405-443)||(13807237-13807275)
chr3 (285-359)||(14223889-14223962)
chr3 (318-359)||(3865592-3865633)
chr3 (318-359)||(12703989-12704030)
chr3 (329-382)||(34307794-34307846)
chr3 (301-361)||(3164059-3164119)
chr3 (325-361)||(4987325-4987361)
chr3 (325-361)||(6525714-6525750)
chr3 (318-354)||(10318075-10318111)
chr3 (287-359)||(14618732-14618804)
chr3 (317-361)||(14832080-14832124)
chr3 (325-361)||(21479107-21479143)
chr3 (328-360)||(25074781-25074813)
chr3 (325-361)||(26290360-26290396)
chr3 (309-361)||(26508083-26508135)
chr3 (405-441)||(27505334-27505370)
chr3 (325-361)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (295-441)||(21002-21149)
scaffold0168 (380-441)||(21217-21278)
scaffold0168 (380-441)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (301-361)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (301-360)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (301-409)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (319-360)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (326-411)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (289-361)||(178853-178925)
scaffold0018 (319-360)||(192284-192325)
[»] chr4 (21 HSPs)
chr4 (301-361)||(23293020-23293080)
chr4 (325-360)||(35723420-35723455)
chr4 (325-359)||(17345451-17345485)
chr4 (303-360)||(847918-847975)
chr4 (308-361)||(36635296-36635349)
chr4 (301-360)||(24343472-24343531)
chr4 (303-409)||(30982863-30982967)
chr4 (318-360)||(7012048-7012090)
chr4 (280-361)||(7670625-7670709)
chr4 (311-361)||(20521883-20521933)
chr4 (301-359)||(20633450-20633508)
chr4 (318-441)||(30298928-30299048)
chr4 (318-441)||(30327796-30327916)
chr4 (327-361)||(40613441-40613475)
chr4 (290-359)||(28084475-28084544)
chr4 (329-361)||(1747205-1747237)
chr4 (286-361)||(5775392-5775469)
chr4 (318-361)||(16184801-16184842)
chr4 (397-441)||(18844423-18844467)
chr4 (405-441)||(28470448-28470484)
chr4 (286-354)||(28720827-28720894)
[»] scaffold0652 (1 HSPs)
scaffold0652 (301-361)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (286-362)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (301-360)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (318-361)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (328-361)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (316-398)||(28830-28913)
[»] scaffold0450 (1 HSPs)
scaffold0450 (413-441)||(8564-8592)
[»] scaffold0027 (2 HSPs)
scaffold0027 (309-361)||(46655-46707)
scaffold0027 (395-443)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 270; Significance: 1e-150; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 151 - 462
Target Start/End: Complemental strand, 38816932 - 38816628
Alignment:
Q  151 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataat 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38816932 caacagagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataat 38816833  T
Q  251 ttgagaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataat 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||    
T  38816832 ttgagaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactcc-------gcacggatactgacacgccgacaccgctaataat 38816740  T
Q  351 ttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcg 450  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38816739 ttgagaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcg 38816640  T
Q  451 tgaatcgtgata 462  Q
    ||||||||||||    
T  38816639 tgaatcgtgata 38816628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 312 - 441
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
Q  312 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 408  Q
    ||||| ||||||||||||||| | |||||  ||||||||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
Q  409 atggctaattcgaggagtgtccgtgcttcatag 441  Q
    | | ||||| |||||||||||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttg 353  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||    
T  22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||||| | |||||| ||| ||||| |||||||| |||||||||||||| | |||||||||||||||||    
T  42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 6326384 - 6326332
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  6326384 ccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 37328955 - 37328829
Alignment:
Q  284 tactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--a 381  Q
    |||||||||||||| | |||||| ||| ||||| |||||| ||||| || ||||||| || |||||||||  |||||| | | | |||| | |||||  |    
T  37328955 tactatgaagcacggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcac-aaaattcagtgtaattaca 37328857  T
Q  382 tgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||||||| ||||||||||||||||    
T  37328856 tgtgtcggtgtcgtgtcggtgtcggaca 37328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 409
Target Start/End: Original strand, 3966492 - 3966577
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||| ||||||||||||||||||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
T  3966492 actgacatgccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 15382442 - 15382500
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||    
T  15382442 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaa 358  Q
    ||||||||||||||||||||||||||||||||||    
T  6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  394 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 443  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 21191143 - 21191090
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| |||||| ||||||| |||||||| ||||||||||||| ||||||    
T  21191143 ccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatc 21191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 2436878 - 2436939
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttg 353  Q
    |||||||||||| |||||||| ||||||||| |||      |||||||||||||||||||||||||||    
T  2436878 ctatgaagcacggatacggacaccggacacgacac------tgacacgccgacaccgctaataatttg 2436939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
Q  389 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataattt 352  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataattt 352  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 27144452 - 27144488
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27144452 actgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 6247572 - 6247647
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||| |||| || ||||| |||||||||  ||| | ||||||||||||||||  |||||||||||| ||||||    
T  6247572 ctatgaaacacggatgcggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatc 6247647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 409
Target Start/End: Original strand, 11685928 - 11686012
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| || | | ||||  ||||||||||||| || |||||||||||||    
T  11685928 actgacatgccgacaccgctaataatttgagaaagtcgc-ataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggaca 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 14674251 - 14674294
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  14674251 cacggacactgacacgccgacacagctaataatttgaaaaaatc 14674294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 19579683 - 19579726
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||    
T  19579683 cacggacactgatacgccgacacagctaataatttgagaaaatc 19579726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 21137654 - 21137713
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||||||||  |||||| ||||||||||||||| || ||||||| |||||||||    
T  21137654 acggacaccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaat 21137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 34879332 - 34879375
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  34879332 cacggatacggacacgccggcaccgctaaaaatttgagaaaatc 34879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 5873590 - 5873548
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||    
T  5873590 cacggacactgacatgccgacacctctaataatttgagaaaat 5873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 443
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  413 ctaattcgaggagtgtccgtgcttcatagtt 443  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 360
Target Start/End: Original strand, 27932229 - 27932259
Alignment:
Q  330 cacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||||||||||||||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaat 27932259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 28588742 - 28588708
Alignment:
Q  327 tgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| ||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatc 28588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 36642849 - 36642803
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  36642849 ccggacacgacacggacactgacacgccgacacagttaataatttga 36642803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 19552626 - 19552577
Alignment:
Q  312 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 19552577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 30135264 - 30135336
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||||||||  |||||||| | ||||||| ||| ||||| |||||||||||||  |||||||||||| ||||    
T  30135264 ctatgaagcacatatacggacac-ggacacgacacagataccgacacgccgacacaactaataatttgaaaaaa 30135336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 363
Target Start/End: Complemental strand, 32767004 - 32766975
Alignment:
Q  334 ccgacaccgctaataatttgagaaaatcgc 363  Q
    ||||||||||||||||||||||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgc 32766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 13287493 - 13287433
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| ||| ||||| |||||| | ||||||||||| ||||||    
T  13287493 acggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatc 13287433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 31084312 - 31084348
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  31084312 actgacacgccgacacagctaataatttgaaaaaatc 31084348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 409
Target Start/End: Original strand, 41995460 - 41995543
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||||||||||||  ||||||||| || |||||| | ||| |||| | |||||| |||||||||  || |||||||||||||    
T  41995460 actgacacgccgacacaactaataattcgaaaaaatcac-ataattcaatgtaattaagtgtcggtgccgtatcggtgtcggaca 41995543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||||| ||||||| | |||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  24105629 ctatgaagcacggatacgga-tacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 29787435 - 29787354
Alignment:
Q  329 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 411  Q
    ||||||||||||||||||||||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 11722185 - 11722132
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  11722185 ccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
Q  299 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 396  Q
    |||||||| ||||||||| || ||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
T  24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
Q  397 tcggtgtcggaca 409  Q
    |||||||||||||    
T  24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 392
Target Start/End: Original strand, 19206025 - 19206107
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 392  Q
    |||||| |||||| ||  ||||||||||||||||||||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  19206025 gacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 409
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 441
Target Start/End: Original strand, 11700798 - 11700909
Alignment:
Q  331 acgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgt 428  Q
    |||| ||||||| ||||||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| ||||||||||    
T  11700798 acgctgacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgt 11700896  T
Q  429 ccgtgcttcatag 441  Q
    || || |||||||    
T  11700897 ccctgattcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 1433419 - 1433479
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||| ||||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  1433419 acggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 441
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
Q  281 atatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat- 379  Q
    ||||||||||||||||| |||||||| ||| ||||| ||| || | | ||||| ||| || |||||||||||||||||||  | ||| || | | ||||     
T  7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
Q  380 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
T  7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaa 357  Q
    |||||||||||| ||||||| | | |||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  2034392 ctatgaagcacggatacgga-tactgacacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
Q  310 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||| || ||||| | ||||||| |||||| ||||||||| |||| | ||||||||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 43249958 - 43250017
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||||||| | |||||| |||||||||||||||| | |||||||||||||||||    
T  43249958 acggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
Q  319 acggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 392
Target Start/End: Original strand, 22484014 - 22484082
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 392  Q
    |||||||||||||||||||||||||||| ||||||| || ||| |||| ||||||  |||||||||||||    
T  22484014 actgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
Q  319 acggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  330 cacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtc 404  Q
    |||||||||||||| ||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 401
Target Start/End: Original strand, 11072290 - 11072362
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 401  Q
    ||||||||||||||| ||||||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
T  11072290 gacacgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
Q  310 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    ||||||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 361
Target Start/End: Original strand, 2948669 - 2948708
Alignment:
Q  322 gatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  2948669 gatactgacacgccgacaccgctgataattttagaaaatc 2948708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 6630982 - 6630897
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||||||||||||| |||||||||||||||| || || || |||| | ||||  ||||||||| ||| |||| |||||||||||    
T  6630982 actgacacgccgacaccactaataatttgagaaagtcact-taattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggaca 6630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 21828482 - 21828439
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||||||||||||||| || |||||||||||||||    
T  21828482 cacggacactgacacgccgacaccgttagtaatttgagaaaatc 21828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 360
Target Start/End: Original strand, 28155563 - 28155594
Alignment:
Q  329 acacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||||||||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaat 28155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 598160 - 598233
Alignment:
Q  287 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||  |||||| || |||| | |||||| ||||||||  |||||||||||||||||| ||||||||    
T  598160 tatgaagcacgac-acggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatc 598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 5235960 - 5236010
Alignment:
Q  310 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||| ||| || ||||||||| |||||||||||||||||| |||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaat 5236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 409
Target Start/End: Original strand, 9933282 - 9933347
Alignment:
Q  343 ctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    |||||||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||||||||    
T  9933282 ctaataatttgaaaaaatcac-atatttcagtaaacttatgtgtcagtgtcgtgtcggtgtcggaca 9933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 20545312 - 20545270
Alignment:
Q  319 acggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  20545312 acggatacggacacgccaacaccgctaataatttgaaaaaatc 20545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 26329476 - 26329418
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||| | ||||||| ||| || ||||||||||||||| || ||||||||||||||||    
T  26329476 acggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaa 26329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 4017879 - 4017830
Alignment:
Q  310 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    ||||||| |||||| || ||||||||||||| | ||||||||||||||||    
T  4017879 ggacacgacacggacaccgacacgccgacacggataataatttgagaaaa 4017830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 442
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  413 ctaattcgaggagtgtccgtgcttcatagt 442  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 25791642 - 25791675
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaa 358  Q
    ||||||||||||||||||||||| ||||||||||    
T  25791642 actgacacgccgacaccgctaattatttgagaaa 25791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 11061162 - 11061110
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||| ||| |||||| |||||||| ||||||| ||||||||||||| ||||||    
T  11061162 cggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatc 11061110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 441
Target Start/End: Original strand, 15680900 - 15680928
Alignment:
Q  413 ctaattcgaggagtgtccgtgcttcatag 441  Q
    |||||||||||||||||||||||||||||    
T  15680900 ctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 17851396 - 17851456
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| || |||||| |||||  ||| |||||||||||||| ||||||||    
T  17851396 acggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatc 17851456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 22868031 - 22868067
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  22868031 actgacacgccgacaccactaataatatgagaaaatc 22868067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 409
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 405  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
T  10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
Q  406 gaca 409  Q
    ||||    
T  10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||| |||| |||||||| ||||||||| ||||||| |||||||||||||||  |||||||||||| ||||||    
T  853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 16766662 - 16766771
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 398  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||||    
T  16766662 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T
Q  399 ggtgtcggaca 409  Q
    |||||||||||    
T  16766761 ggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 5000720 - 5000660
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||| | |||||||||||||||| ||||||||||||||||| |||||||||    
T  5000720 acggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 441
Target Start/End: Complemental strand, 5732604 - 5732474
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 400  Q
    |||||| | ||||||| || ||| |||||||||||||||||| |||||||||||||||||| | |||||| | | ||||||| |         |||||||    
T  5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcgg 5732515  T
Q  401 tgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||||||| | ||||| |||||||||||| ||||||||||    
T  5732514 tgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||||||||| |||||||| || |||||| |||||| ||||||||||||||||  ||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
Q  288 atgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||| |||||||| | ||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 8805656 - 8805524
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt---gtcgga 407  Q
    |||||| ||| || || |||||| || ||| |||||||||||||||||||| | ||| || | | ||||||||||||||||| ||||| |    || |||    
T  8805656 gacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcac-ataatttagtgtaattatgtgtcggtgtagtgtcagacacgtggga 8805558  T
Q  408 catggctaattcgaggagtgtccgtgcttcatag 441  Q
    |||| ||||| |||||||||||||||||||||||    
T  8805557 catgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 409
Target Start/End: Complemental strand, 9107464 - 9107355
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 398  Q
    |||||| ||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||| | | | |||| | |||||  | |||||||||| |||||    
T  9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T
Q  399 ggtgtcggaca 409  Q
    |||||||||||    
T  9107365 ggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
Q  310 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| |||||||||||| ||||||| | ||| || || ||||| || |||||||||||||||||||||||||    
T  30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||||| | || ||| ||||||||| |||||| ||| |||||||||||| | |||||||||||||||||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 361
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
Q  323 atactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||||||| | ||||||||  || ||||| |||||| |||||||||||||||| |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 7938081 - 7938141
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||||||    
T  7938081 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  312 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 7977924 - 7977865
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| | ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 20371187 - 20371144
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  20371187 cacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 404
Target Start/End: Complemental strand, 34073441 - 34073337
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 398  Q
    |||||| | ||||||| |||||| ||||||| ||| ||| ||||||||||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||    
T  34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T
Q  399 ggtgtc 404  Q
    ||||||    
T  34073342 ggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 426601 - 426548
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  426601 ccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
Q  320 cggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 34595099 - 34595159
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||||    
T  34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  394 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 17841666 - 17841623
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  17841666 cacggacactgacacgccgacacagctaataatttgaaaaaatc 17841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 392
Target Start/End: Complemental strand, 31579311 - 31579229
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 392  Q
    |||||||| || ||| |||| ||| || |||||| |||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  31579311 cggacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcac-ataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 25038180 - 25038106
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||||| ||||||||   | | ||| ||| ||||||||||||  ||||||| |||||||||||||||||    
T  25038180 ctatgaagcacggatacggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaat 25038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 31959111 - 31959184
Alignment:
Q  287 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||| |||||||| | ||||| | |||| | |||||||||||| ||| ||||||||||||| ||||||    
T  31959111 tatgaagcacggatacggacac-ggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatc 31959184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 443
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  413 ctaattcgaggagtgtccgtgcttcatagtt 443  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 441
Target Start/End: Original strand, 2117134 - 2117175
Alignment:
Q  400 gtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  2117134 gtgtcggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 361
Target Start/End: Original strand, 10842524 - 10842557
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||||||||||||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatc 10842557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 405
Target Start/End: Original strand, 26562664 - 26562759
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 405  Q
    ||||| ||||| | || ||||||||||||| ||||| |||||||||||||| | ||| |||| | ||||  ||||||||| ||| ||||||||||||    
T  26562664 gacaccgcacgaacacggacacgccgacactgctaaaaatttgagaaaatcac-ataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 677826 - 677862
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| | ||||||||||||||||||    
T  677826 actgacacgccgacactgttaataatttgagaaaatc 677862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 4877890 - 4877965
Alignment:
Q  286 ctatgaagcacgaatacggactc--cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||||||||  |||||||| |  || ||||| |||||||| |||||| ||||||| ||||||||||||| ||||    
T  4877890 ctatgaagcacagatacggacacgccgaacacgacacggatagtgacacaccgacacagctaataatttgaaaaaa 4877965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 7930254 - 7930330
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||| | |||| ||| |||||||| | ||||| ||||||| ||||||||   ||||||||||| ||||||    
T  7930254 actatgaagcatggatacagacaccggacacagaacggacactgacatgccgacacaattaataatttgaaaaaatc 7930330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 7996448 - 7996412
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  7996448 actgacatgccgacactgctaataatttgagaaaatc 7996412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 8022353 - 8022389
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  8022353 actgacatgccgacactgctaataatttgagaaaatc 8022389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 10339196 - 10339160
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||||| | |||||||||||||||    
T  10339196 actgacacgccgacaccgcgattaatttgagaaaatc 10339160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 16833281 - 16833333
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| ||| || ||||||||||||||||  |||||||||||| ||||||    
T  16833281 cggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatc 16833333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 17341734 - 17341698
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  17341734 actgacacgccgacaccgttaataatttgataaaatc 17341698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 21395374 - 21395342
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||| ||||||||||||||||||||||||    
T  21395374 gacacgccaacaccgctaataatttgagaaaat 21395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 21424872 - 21424836
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  21424872 actgacacgccaacaccgctaataatttgaaaaaatc 21424836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 34290147 - 34290064
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||| ||||||||  ||||||||||| || |||| | ||| |||| | ||||||||||||||||| ||||| ||||| ||||    
T  34290147 actgacatgccgacacaactaataatttgcgagaatcac-ataattcagtgtaattatgtgtcggtgtcgtgtcagtgtccgaca 34290064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 409
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 405  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
T  22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
Q  406 gaca 409  Q
    ||||    
T  22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 303 - 409
Target Start/End: Complemental strand, 29510396 - 29510289
Alignment:
Q  303 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 400  Q
    |||| ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | | | |||| |||||||  | |||||||||| |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T
Q  401 tgtcggaca 409  Q
    |||||||||    
T  29510297 tgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||||||||||||||||||  ||||||||  ||||| |||||||||||||||| |||||||||||||    
T  25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
Q  295 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||| |||||| ||||||||| |||||| ||||||||||| ||||  |||||||||||||||||||    
T  926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 126457 - 126390
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||||||||| ||||| || | |||||||  ||||||||||||||||| ||||||||||||||||||    
T  126457 ctatgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||| | | |||| ||||||| | || ||| |||||||||||||||| ||||||||||||| ||||||    
T  13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 31109595 - 31109552
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  31109595 cacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
Q  299 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| ||||| ||| ||| || || ||||||||||||||||||||||||||||| ||||    
T  24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 361
Target Start/End: Complemental strand, 39954346 - 39954313
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||||||||||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 31236651 - 31236611
Alignment:
Q  321 ggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  31236651 ggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 394
Target Start/End: Complemental strand, 37283887 - 37283812
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 394  Q
    |||||| ||||||| || | ||||||||||||| |||||||||| | ||| |||| | |||||||||||||||||||    
T  37283887 cacggacactgacatgcgggcaccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 4298994 - 4298920
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||| ||| |||| | ||||||| ||| |||||| |||||||||||| | ||||||||||| ||||||    
T  4298994 ctatgaagcacggatatggacac-ggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatc 4298920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 11944615 - 11944690
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||  |||||||| ||  ||||| ||||||| || |||||||||||| | ||||||||||| ||||||    
T  11944615 ctatgaagcacagatacggacaccaaacacgacacggatgctaacacgccgacactgttaataatttgataaaatc 11944690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 4673521 - 4673459
Alignment:
Q  299 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||  |||||||| ||| || |||||||||||||||| | ||||||||||| ||||||    
T  4673521 atacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatc 4673459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 361
Target Start/End: Original strand, 27101506 - 27101540
Alignment:
Q  327 tgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||||||||||||||| ||||||    
T  27101506 tgacacgccgacaccgctaataatttgaaaaaatc 27101540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 34897068 - 34897110
Alignment:
Q  319 acggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatc 34897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 404
Target Start/End: Complemental strand, 11927195 - 11927076
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatg 383  Q
    |||||||||||  |||||||| ||  ||||| ||||||| || | |||||||||| | ||||||||||| |||||| | ||| |||| | ||||  ||||    
T  11927195 ctatgaagcacagatacggacaccaaacacgacacggatgctaatacgccgacactgttaataatttgataaaatcac-ataattcagtgtaattatatg 11927097  T
Q  384 tgtcggtgtggtgtcggtgtc 404  Q
    ||||||||| |||| ||||||    
T  11927096 tgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 361
Target Start/End: Complemental strand, 13844663 - 13844630
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||| ||||||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatc 13844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 2572150 - 2572090
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| | ||||||| ||||||||| |||||| ||||||  |||||||||||| ||||||    
T  2572150 acggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatc 2572090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 20873042 - 20873094
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| |||||| |||||||||||||||  | ||||||||||| ||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatc 20873094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 409
Target Start/End: Original strand, 29776013 - 29776108
Alignment:
Q  313 cacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    |||| |||||| | ||||| | |||||| |||||||||||||||||||| |  || |||| ||||||||| |||||||||   ||| ||||||||||    
T  29776013 cacgacacggacattgacaagtcgacactgctaataatttgagaaaatcac-gtaattcagtataattatatgtcggtgttaagtcagtgtcggaca 29776108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 397
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 385  Q
    ||||||||||||||||| ||| | ||||||| |||  | |||||||||||||||| |||||||||||||||||||| | ||| |||| | ||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
Q  386 tcggtgtggtgt 397  Q
     |||||| ||||    
T  21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 33519736 - 33519800
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataat 350  Q
    |||||||||||| |||||||| ||||||||| | ||||||||||||| |||||||||||||||||    
T  33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||| |||||||| | ||||||| |||||| ||||||||| |||||| ||||||||||||| ||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 392
Target Start/End: Original strand, 4332891 - 4332981
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 392  Q
    |||||| ||||||||||||| |||||| ||| |||||||| | |||||||||| ||||||| | ||| |||| | |||||||||||||||||    
T  4332891 acggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||||||||  |||||||| ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 23717976 - 23718048
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 358  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  23717976 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 24105648 - 24105720
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 358  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  24105648 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 1327976 - 1328033
Alignment:
Q  334 ccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 392  Q
    ||||||||||||||||||||||||||||  || | |||| |||||||||||||||||||    
T  1327976 ccgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 409
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 386
Target Start/End: Original strand, 18276486 - 18276570
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 386  Q
    |||||| |||||||||  || || ||||| | ||||||||||||||||||||||||||||| || || |||| | |||||||||||    
T  18276486 acggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
Q  287 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataattt 352  Q
    |||||||| || |||||||| ||| ||||| ||| || |||||||||||||||| |||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 441
Target Start/End: Original strand, 19573970 - 19574078
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtg 427  Q
    ||||||||||||||| ||||||||| |||||||  | ||| |||| | |||||||     ||||  ||||||||||||||||   |||||||||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataac-ataattcagtgtaattata----ggtggcgtgtcggtgtcggacacacctaattcgaggagtg 19574064  T
Q  428 tccgtgcttcatag 441  Q
    ||| ||||||||||    
T  19574065 tccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 409
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
Q  336 gacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 411
Target Start/End: Complemental strand, 18420506 - 18420417
Alignment:
Q  323 atactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 411  Q
    ||||||||||||| |||| |||||||||||||||||||| | ||| |||| |  ||||||  |||||||||| |||||  |||||||||||    
T  18420506 atactgacacgccaacactgctaataatttgagaaaatcac-ataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatg 18420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  394 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 37411313 - 37411278
Alignment:
Q  326 ctgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||||||||||||||||||||||||||    
T  37411313 ctgacatgccgacaccgctaataatttgagaaaatc 37411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 38117261 - 38117193
Alignment:
Q  287 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||| |||||||| ||||||||| |||      |||||||||||||| ||||||||||||| ||||||    
T  38117261 tatgaagcacggatacggacaccggacacgacac------tgacacgccgacacagctaataatttgaaaaaatc 38117193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 14996333 - 14996260
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    ||||||||||||| |||||||| | | ||| | |||||| ||||||| |||||||| ||||||||||||| ||||    
T  14996333 actatgaagcacggatacggacgcag-acatgacacggacactgacaagccgacacagctaataatttgaaaaaa 14996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  394 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 440  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 21374810 - 21374734
Alignment:
Q  285 actatgaagcacgaatacggactccggacacgg--cacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||||||||| |||||||| | |||||| |  |||||| ||| |||||||||||| ||||||||||||| |||||    
T  21374810 actatgaagcacggatacggacac-ggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaat 21374734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 391
Target Start/End: Original strand, 28412315 - 28412404
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtg 391  Q
    |||||| || |||||| |||||| ||| ||||| | |||||| ||||||||||| |||||| | ||| |||| | ||||||||||||||||    
T  28412315 acggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcac-ataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 361
Target Start/End: Original strand, 31018557 - 31018615
Alignment:
Q  303 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||| ||||| ||| || ||| ||||||||||| |||||||||||||||| ||||||||    
T  31018557 ggacaccggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatc 31018615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  394 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 440  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  394 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 440  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 406
Target Start/End: Original strand, 2331743 - 2331863
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgt 384  Q
    ||||||||||||| | || |||  || || || |||||| | ||||||||  |||||  |||||||||||||||||| | ||| |||| | || ||||||    
T  2331743 actatgaagcacggacacagacatcgaacgcgacacggacattgacacgcaaacaccattaataatttgagaaaatcac-ataattcagtgtatttatgt 2331841  T
Q  385 gtcggtgtggtgtcggtgtcgg 406  Q
    |||||||| ||||| |||||||    
T  2331842 gtcggtgtcgtgtcagtgtcgg 2331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 360
Target Start/End: Complemental strand, 4142936 - 4142875
Alignment:
Q  299 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||| ||| ||||| | |||| ||||||||||||||||| |||| ||||| |||||||    
T  4142936 atacggacaccgaacacgacccggacactgacacgccgacaccactaacaatttaagaaaat 4142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 21091706 - 21091747
Alignment:
Q  319 acggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||| |||||||| ||||||||||||||||||| |||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaagaaaat 21091747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 896200 - 896236
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  896200 actgacacgccgacactgctaatagtttgagaaaatc 896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 10535842 - 10535794
Alignment:
Q  312 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||| ||| |||||| | |||||||||||| |||||||||||||||||    
T  10535842 acacgacacagatactaatacgccgacaccgataataatttgagaaaat 10535794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 30404936 - 30404884
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| | |||||| |||||||||||||||| | ||||||||||| ||||||    
T  30404936 cggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatc 30404884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 31284041 - 31284073
Alignment:
Q  329 acacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||| ||||||||||||||||||||    
T  31284041 acacgccgacactgctaataatttgagaaaatc 31284073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 441
Target Start/End: Complemental strand, 42511358 - 42511322
Alignment:
Q  405 ggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  42511358 ggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 42832343 - 42832311
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||| |||||||||||||||||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaat 42832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 13349 - 13425
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 441
Target Start/End: Original strand, 20122 - 20279
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atg 383  Q
    |||||||||||  |||||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
Q  384 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 441  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 40917716 - 40917776
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 398858 - 398799
Alignment:
Q  302 cggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 440
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
Q  294 cacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 391  Q
    |||| |||||||| ||||||||| || | | ||||||||||||||||| ||||||||||||||||||| | ||| |||  | |||||  |||||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
Q  392 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 440  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
T  10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||| ||||| |||| || |||||||||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  5376609 actatgaggcacgtatacaga-tccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 5927449 - 5927374
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||| ||||||| |||||||| ||||||||| |||||| ||||||||||  |||| ||||||||||||| ||||||    
T  5927449 ctattaagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatc 5927374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 441
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
Q  388 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 12443538 - 12443494
Alignment:
Q  317 gcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  12443538 gcacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 400
Target Start/End: Complemental strand, 1486796 - 1486703
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 400  Q
    ||||| ||| ||||||||||||||||| ||||| ||||||||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||||    
T  1486796 ccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 38503285 - 38503386
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 398  Q
    |||||| | ||||| | |||||| ||| |||| ||||||||||||||||||||||||||||  ||||||||| | ||||  |||||||||||||  ||||    
T  38503285 acggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T
Q  399 ggt 401  Q
    |||    
T  38503384 ggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 44482234 - 44482343
Alignment:
Q  340 ccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg-----gctaattcgaggagtgtccgt 432  Q
    ||||| |||||||||||||||| | ||| |||| | |||||||  |||||||||| |||||||||||||||| |     |||||| ||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcac-ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacagctaatccgaggagtgtccgt 44482332  T
Q  433 gcttcatagtt 443  Q
    ||| |||||||    
T  44482333 gctccatagtt 44482343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
Q  299 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||||| ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 1262856 - 1262933
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 386  Q
    ||||||||| |||| | || ||||||||||||| |||||||||||||||||||| | ||| |||| |||||||| ||||    
T  1262856 ccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||||||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 39130876 - 39130802
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||||||| |||||||| ||||||||| || ||||| |||||||| |||||   ||||||||| |||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaat 39130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 19562691 - 19562655
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19562691 actgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 609528 - 609493
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||||||||||||| ||||||||||||||||||    
T  609528 actgacacgccgacaccactaataatttgagaaaat 609493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 6415078 - 6415035
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||    
T  6415078 cacggacactgacacgccgacatcgctaattatttgagaaaatc 6415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 31014993 - 31015068
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||| | || ||| |||| |||| |||||  |||||| |||| |||| ||||||||||||||||||||    
T  31014993 ctatgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatc 31015068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 46348460 - 46348417
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  46348460 cacggacactgacacgccgacacagctaataatttgaaaaaatc 46348417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 48450673 - 48450622
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||||| |||||| ||||||||||| |||| ||||||||||||| |||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaat 48450622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 3490460 - 3490426
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||||||||||||| ||||||||||||||||||    
T  3490460 actgacacgccgacactgctaataatttgagaaaa 3490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 10475045 - 10475011
Alignment:
Q  327 tgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||||||||| |||||||||||    
T  10475045 tgacacgccgacaccgctaataacttgagaaaatc 10475011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 361
Target Start/End: Complemental strand, 15641130 - 15641064
Alignment:
Q  295 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||| ||||||  |||||| | |||||| ||||||| |||||||| ||||||||||| ||||||||    
T  15641130 acgaacacggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatc 15641064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 40285724 - 40285686
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatcgc 363  Q
    |||||||| || |||||||||||||||||||||||||||    
T  40285724 actgacacaccaacaccgctaataatttgagaaaatcgc 40285686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 20157437 - 20157384
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| |||||  ||||||||  |||||||||||||||| ||||||||||    
T  20157437 ccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatc 20157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 361
Target Start/End: Original strand, 21530681 - 21530714
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||| ||||||||||||||||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatc 21530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 25361881 - 25361960
Alignment:
Q  331 acgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    ||||||||||| || |||||||||||||||| | ||| |||| | ||||  |||||||| |||| ||||||||||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcac-ataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggaca 25361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 41877534 - 41877505
Alignment:
Q  331 acgccgacaccgctaataatttgagaaaat 360  Q
    ||||||||||||||||||||||||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaat 41877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 9828036 - 9828118
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataa--ttatgtgtcggtgtggtgtcggtgtcggaca 409  Q
    |||||||||||||| |||||||||||| |||||| | ||| |||| | |||  |||||||||||||| ||||| ||||| ||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcac-ataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagaca 9828118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 10577829 - 10577769
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| || ||||||||||||| ||||||  ||| ||||||||    
T  10577829 acggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatc 10577769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 18556533 - 18556497
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||| |||||||||||||||| |||||||||||||    
T  18556533 cacggacactgacacgccgacacagctaataatttga 18556497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 25452215 - 25452152
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 392  Q
    |||| ||| |||| |||||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  25452215 gacatgccaacactgctaataatttgagaaaatctc-ataattcagtgtaattatgtgtcggtgt 25452152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 34315663 - 34315722
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaa 346  Q
    |||||||||||| ||||||| |  ||||||| |||||||||||||| |||||||| |||||    
T  34315663 ctatgaagcacggatacgga-tatggacacgacacggatactgacatgccgacacagctaa 34315722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 8383207 - 8383282
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||| |||||| | |||||| | ||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  8383207 ctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 5441128 - 5441029
Alignment:
Q  299 atacggac-tccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgt 397  Q
    |||||||| |||||||||| ||| || |||||||||||| ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| ||||    
T  5441128 atacggacatccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgt 5441030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
Q  322 gatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 411  Q
    |||| ||||||||| ||||||||||||||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 24205135 - 24205076
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataattt 352  Q
    |||||||||||| |||||||| ||||| ||| |||||| | ||||| ||||||||||||||||||||    
T  8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 382
Target Start/End: Complemental strand, 5407325 - 5407261
Alignment:
Q  317 gcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 382  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||    
T  5407325 gcacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 28917966 - 28918026
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 4991061 - 4991002
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||| ||||| |||||| |||||||| ||||||||||||||| |||||||||||    
T  4991061 acggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
Q  295 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||||  ||||||||||||    
T  10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 25064859 - 25064981
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 385  Q
    ||||||| ||||  ||| ||| ||||||||| ||| || | ||||||||||||||||||||| |||||| |||||| | ||| || | | ||||||||||    
T  25064859 ctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtg 25064957  T
Q  386 tcggtgtggtgtcggtgtcggaca 409  Q
    | ||| | |||| |||||||||||    
T  25064958 ttggtatcgtgttggtgtcggaca 25064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 361
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||  |||||||| ||||| ||| |||||| ||||| ||||||||||  |||||||||||| ||||||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 8587129 - 8587055
Alignment:
Q  287 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||  |||||||| ||||||| | |||||| ||||||||||||||||  ||| |||||||| ||||||    
T  8587129 tatgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatc 8587055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
Q  310 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||| |||| | ||||||||||||||||| ||||||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
Q  287 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||| |||||||| ||||||||  |||| | | |||||| |||||| |||||||||||| ||||||||    
T  32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| | |||| ||||||||||||||||| ||||| |||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 15796388 - 15796328
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| | |||||||||||||| | ||||||||||| ||||||    
T  15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 361
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 21720746 - 21720785
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaa 357  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  21720746 cacggacactgacacgccgacaccgataataatttgagaa 21720785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 443
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  405 ggacatggctaattcgaggagtgtccgtgcttcatagtt 443  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 443
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  413 ctaattcgaggagtgtccgtgcttcatagtt 443  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 12674585 - 12674535
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||| | |||||| ||||||| ||||||||||||||||||||    
T  12674585 gacacgacacggacattgacacaccgacactgctaataatttgagaaaatc 12674535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 443
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  405 ggacatggctaattcgaggagtgtccgtgcttcatagtt 443  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 14223962 - 14223889
Alignment:
Q  285 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    ||||||||||||||| || ||| | ||||||| ||| || || ||||||||||||| | ||||||||||||||||    
T  14223962 actatgaagcacgaacacagacac-ggacacgacacagacaccgacacgccgacacagataataatttgagaaaa 14223889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 3865633 - 3865592
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  3865633 cacggacactgacacgccgacacagctaataatttgaaaaaa 3865592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 12703989 - 12704030
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  12703989 cacggatatggacacgccgacaccactaataatttgagaaaa 12704030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 34307846 - 34307794
Alignment:
Q  329 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 382  Q
    |||||| |||||||||||||||||||||||||| | |||||||| | |||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcac-atatttcagtgtaattat 34307794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 3164119 - 3164059
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| | || |||| |||||| ||||||||||||| ||||||    
T  3164119 acggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatc 3164059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 4987361 - 4987325
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  4987361 actgacacgccgacacagctaataatttgaaaaaatc 4987325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 6525750 - 6525714
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||| | |||||||||||||||||||||||||||    
T  6525750 actgacatgtcgacaccgctaataatttgagaaaatc 6525714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 10318111 - 10318075
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||| |||||||||||||||| |||||||||||||    
T  10318111 cacggacactgacacgccgacacagctaataatttga 10318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 14618732 - 14618804
Alignment:
Q  287 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||||||||  ||||||| || |||||| |||||  ||||| |||| |||||| |||||||||| ||||||    
T  14618732 tatgaagcacgggtacggacaccagacacgacacgggcactgagacgctgacacccctaataatttaagaaaa 14618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 14832080 - 14832124
Alignment:
Q  317 gcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||| |||||||||| || ||||||||||||| ||||||    
T  14832080 gcacggatacggacacgccgatacagctaataatttgaaaaaatc 14832124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 21479107 - 21479143
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  21479107 actgacacgccgacacagctaataatttgaaaaaatc 21479143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 25074781 - 25074813
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||||||||||| |||||||||||||||||    
T  25074781 gacacgccgacaccgataataatttgagaaaat 25074813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 26290360 - 26290396
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||||  ||||||||||||||||||    
T  26290360 actgacacgccgacaccattaataatttgagaaaatc 26290396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 26508083 - 26508135
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||  || ||||||||||||| ||||| ||||||||||||| ||||||    
T  26508083 cggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatc 26508135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 27505334 - 27505370
Alignment:
Q  405 ggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  27505334 ggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 40052321 - 40052357
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  40052321 actgacacgccgacacagctaataatttgaaaaaatc 40052357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 441
Target Start/End: Original strand, 21002 - 21149
Alignment:
Q  295 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 392  Q
    ||||| |||||| || |||||| |||||| ||||||| || ||||| | |||||||||||||||||| | |||  ||  ||||||  ||||||||||| |    
T  21002 acgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtat 21100  T
Q  393 ggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
     ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
T  21101 cgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 21217 - 21278
Alignment:
Q  380 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 21346 - 21407
Alignment:
Q  380 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 8763 - 8823
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||    
T  8763 acggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 225362 - 225303
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  225362 acggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 409
Target Start/End: Original strand, 241559 - 241668
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 398  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||||||  |||||| | ||| || | | |||||||  |||||||||| ||||     
T  241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgtt 241657  T
Q  399 ggtgtcggaca 409  Q
    |||||||||||    
T  241658 ggtgtcggaca 241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 92790 - 92831
Alignment:
Q  319 acggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 53170 - 53256
Alignment:
Q  326 ctgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 411  Q
    |||||||||||| ||||| ||||||||||||||||| | ||| |||| | |||||||  |||||||||  ||||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 178925 - 178853
Alignment:
Q  289 tgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| |||  ||| ||||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 192325 - 192284
Alignment:
Q  319 acggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 23293080 - 23293020
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||    
T  23293080 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaat 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
Q  325 actgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||||||||||||||||||||||||||||||||    
T  17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 847918 - 847975
Alignment:
Q  303 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||| ||||||||| ||| || |||||||||||||  |||||||||||||||||||||    
T  847918 ggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
Q  308 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||| | |||| ||||||||||| ||||| |||||||||||||||||||    
T  36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 24343472 - 24343531
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||||||||| ||||||  | ||||||||||||| | |||||||||||||||||    
T  24343472 acggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaat 24343531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 409
Target Start/End: Complemental strand, 30982967 - 30982863
Alignment:
Q  303 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 400  Q
    |||| ||||| ||| |||||| || ||||||||   ||||||||| ||||||||||||| | |||||||| | |||||||  |||||||||| |||||||    
T  30982967 ggacaccggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcac-atatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T
Q  401 tgtcggaca 409  Q
    |||| ||||    
T  30982871 tgtcagaca 30982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 7012048 - 7012090
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| || ||||||||||||||| |||||||||||||||||    
T  7012048 cacggacaccgacacgccgacaccgataataatttgagaaaat 7012090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 7670625 - 7670709
Alignment:
Q  280 catatactatgaagcacgaatacggactccggacacggcacggatactgaca---cgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||||||||| |||  ||||||||| | |||| |||||||   ||||||||  ||||||| ||||||||||||    
T  7670625 catatagtatgaagcacgaatatggataccggacacgacgcggaaactgacacgtcgccgacattgctaatagtttgagaaaatc 7670709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 20521933 - 20521883
Alignment:
Q  311 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||| ||||||    
T  20521933 gacacgacacggacactgacacgccgataccgataataatttgataaaatc 20521883  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 20633450 - 20633508
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||| || ||||||  ||||| ||||||||| |||||||||||||||||||| ||||    
T  20633450 acggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 30298928 - 30299048
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 415  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30298928 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30299022  T
Q  416 attcgaggagtgtccgtgcttcatag 441  Q
    || |||||||||||||||||||||||    
T  30299023 atccgaggagtgtccgtgcttcatag 30299048  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 441
Target Start/End: Original strand, 30327796 - 30327916
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 415  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30327796 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30327890  T
Q  416 attcgaggagtgtccgtgcttcatag 441  Q
    || |||||||||||||||||||||||    
T  30327891 atccgaggagtgtccgtgcttcatag 30327916  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 361
Target Start/End: Original strand, 40613441 - 40613475
Alignment:
Q  327 tgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||||||||| ||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatc 40613475  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 28084475 - 28084544
Alignment:
Q  290 gaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 359  Q
    |||||||  |||||||| ||||||||| ||| ||  ||||||||||||||| ||||| ||||||| ||||    
T  28084475 gaagcacagatacggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaa 28084544  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 1747205 - 1747237
Alignment:
Q  329 acacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||||||||| |||||||||||    
T  1747205 acacgccgacaccgctaataaattgagaaaatc 1747237  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 361
Target Start/End: Complemental strand, 5775469 - 5775392
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacgga---tactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||||||||||| |||| | ||||||| ||||||   |||||||||  |||||||  ||||||||||||||||||    
T  5775469 ctatgaagcacgaatatggacacaggacacgacacggacactactgacac-acgacaccattaataatttgagaaaatc 5775392  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 16184801 - 16184842
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||||||||||||||  |||||||||||||||||||||    
T  16184801 cacggacactgacacgccgac--cgctaataatttgagaaaatc 16184842  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 441
Target Start/End: Complemental strand, 18844467 - 18844423
Alignment:
Q  397 tcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||    
T  18844467 tcggtgtcggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 28470448 - 28470484
Alignment:
Q  405 ggacatggctaattcgaggagtgtccgtgcttcatag 441  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcatag 28470484  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 28720827 - 28720894
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 354  Q
    |||||||||||| |||| ||| | ||||||| |||| | ||||||| |||||||| |||||||||||||    
T  28720827 ctatgaagcacgtatacagacac-ggacacgacacgaacactgacatgccgacacagctaataatttga 28720894  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 556 - 496
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| ||| ||||| |||||| ||||| |||||||||| ||||||||||||| ||||||    
T  556 acggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatc 496  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 362
Target Start/End: Complemental strand, 17979 - 17903
Alignment:
Q  286 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcg 362  Q
    |||||||||||| |||||||| | |||||||  ||  | ||  ||||||| ||||||||||||||||||||||||||    
T  17979 ctatgaagcacggatacggacactggacacgatacaaacaccaacacgcctacaccgctaataatttgagaaaatcg 17903  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 3281 - 3340
Alignment:
Q  301 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 360  Q
    |||||| ||||||||| |||||||||||||||| |||||  ||||| ||||| |||||||    
T  3281 acggacaccggacacgacacggatactgacacgtcgacaatgctaacaattttagaaaat 3340  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 51793 - 51836
Alignment:
Q  318 cacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  51793 cacggacactgacacgccgacacagctaataatttgaaaaaatc 51836  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 361
Target Start/End: Original strand, 1636 - 1669
Alignment:
Q  328 gacacgccgacaccgctaataatttgagaaaatc 361  Q
    ||||||||||||||| ||||||||||||||||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatc 1669  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 28830 - 28913
Alignment:
Q  316 ggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 398  Q
    |||||| | ||| |||||||||||||| ||||||||| |||||||||| ||| |||| | ||||  ||||||||||||| |||||    
T  28830 ggcacgaacactaacacgccgacaccgttaataatttaagaaaatcgc-ataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 441
Target Start/End: Complemental strand, 8592 - 8564
Alignment:
Q  413 ctaattcgaggagtgtccgtgcttcatag 441  Q
    |||||||||||||||||||||||||||||    
T  8592 ctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 46655 - 46707
Alignment:
Q  309 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 361  Q
    |||||||| |||||| | |||||||||||||| | ||||||||||| ||||||    
T  46655 cggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 46707  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 46731 - 46778
Alignment:
Q  395 tgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 443  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  46731 tgtcggtgtcg-acacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

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