View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8912A_low_156 (Length: 283)
Name: NF8912A_low_156
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8912A_low_156 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 101 - 264
Target Start/End: Original strand, 32096357 - 32096520
Alignment:
| Q |
101 |
aacattaccataacatcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
200 |
Q |
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| T |
32096357 |
aacattaccataacgtcaagcaacaatccttctctatgcaaacactcaatctccaacaaagcatcactctcaataatcgaaacctgaaccgacgaaacaa |
32096456 |
T |
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| Q |
201 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttctt |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32096457 |
cctccgtctcaactgctttcgctctcgtggctccacactcttccacaatcctcacctttttctt |
32096520 |
T |
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