View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_161 (Length: 281)

Name: NF8912A_low_161
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_161
NF8912A_low_161
[»] scaffold0114 (1 HSPs)
scaffold0114 (22-281)||(40316-40575)
[»] scaffold0348 (2 HSPs)
scaffold0348 (30-273)||(4644-4887)
scaffold0348 (22-268)||(17271-17517)
[»] chr8 (25 HSPs)
chr8 (30-269)||(22027515-22027754)
chr8 (15-273)||(22054166-22054424)
chr8 (16-248)||(31413753-31413985)
chr8 (21-248)||(21928756-21928983)
chr8 (40-254)||(16268469-16268683)
chr8 (22-273)||(22374172-22374423)
chr8 (16-273)||(28984214-28984471)
chr8 (21-273)||(19985483-19985735)
chr8 (22-247)||(29300653-29300878)
chr8 (21-208)||(20391454-20391641)
chr8 (45-210)||(22523876-22524041)
chr8 (110-209)||(6606784-6606883)
chr8 (55-107)||(19481335-19481387)
chr8 (58-210)||(30310407-30310559)
chr8 (58-101)||(19115872-19115915)
chr8 (58-101)||(20015529-20015572)
chr8 (58-104)||(17671288-17671334)
chr8 (58-210)||(15536749-15536901)
chr8 (58-210)||(21671881-21672033)
chr8 (58-101)||(18860049-18860092)
chr8 (58-101)||(22126225-22126268)
chr8 (148-210)||(21163883-21163945)
chr8 (57-210)||(32603511-32603664)
chr8 (58-210)||(22043193-22043345)
chr8 (58-95)||(22117441-22117478)
[»] scaffold0003 (2 HSPs)
scaffold0003 (15-273)||(203647-203905)
scaffold0003 (58-101)||(424746-424789)
[»] chr3 (62 HSPs)
chr3 (15-273)||(16831533-16831791)
chr3 (15-273)||(16384377-16384635)
chr3 (15-273)||(13944890-13945148)
chr3 (15-273)||(8744395-8744653)
chr3 (22-269)||(12357539-12357786)
chr3 (22-256)||(31941786-31942020)
chr3 (22-248)||(17189265-17189491)
chr3 (22-248)||(18131359-18131585)
chr3 (22-256)||(31692197-31692431)
chr3 (22-248)||(24190195-24190420)
chr3 (21-269)||(14290543-14290791)
chr3 (22-243)||(16825291-16825512)
chr3 (16-273)||(47126810-47127067)
chr3 (22-206)||(12857508-12857692)
chr3 (21-273)||(35983047-35983299)
chr3 (16-273)||(10408834-10409091)
chr3 (34-248)||(11958205-11958419)
chr3 (16-273)||(28757185-28757442)
chr3 (16-256)||(16326713-16326955)
chr3 (22-244)||(12181239-12181461)
chr3 (85-273)||(13317644-13317832)
chr3 (21-248)||(17494538-17494768)
chr3 (85-209)||(15008659-15008783)
chr3 (71-211)||(15230531-15230671)
chr3 (71-211)||(15236399-15236539)
chr3 (192-269)||(11949107-11949184)
chr3 (123-209)||(2037025-2037111)
chr3 (123-209)||(2040766-2040852)
chr3 (55-101)||(10008625-10008671)
chr3 (55-101)||(10909235-10909281)
chr3 (64-210)||(12843168-12843314)
chr3 (123-209)||(14039676-14039762)
chr3 (58-107)||(3688962-3689011)
chr3 (94-210)||(15262549-15262665)
chr3 (64-203)||(19727686-19727825)
chr3 (58-101)||(20059116-20059159)
chr3 (58-104)||(5421992-5422038)
chr3 (58-104)||(6597077-6597123)
chr3 (58-104)||(6603757-6603803)
chr3 (58-104)||(12889731-12889777)
chr3 (58-104)||(13255712-13255758)
chr3 (58-104)||(16638795-16638841)
chr3 (68-210)||(23414859-23415001)
chr3 (58-104)||(43165697-43165743)
chr3 (58-104)||(48428469-48428515)
chr3 (169-273)||(10417204-10417308)
chr3 (58-101)||(15399580-15399623)
chr3 (58-101)||(15713118-15713161)
chr3 (148-210)||(15065990-15066052)
chr3 (58-104)||(15345307-15345353)
chr3 (58-104)||(16753763-16753809)
chr3 (148-273)||(11861209-11861334)
chr3 (58-95)||(26790475-26790512)
chr3 (58-95)||(53382081-53382118)
chr3 (58-94)||(24186222-24186258)
chr3 (178-273)||(12501789-12501884)
chr3 (58-101)||(15359077-15359120)
chr3 (58-104)||(15586454-15586500)
chr3 (148-210)||(17497610-17497672)
chr3 (148-210)||(23079166-23079228)
chr3 (57-110)||(23079075-23079128)
chr3 (178-210)||(16695083-16695115)
[»] scaffold0005 (1 HSPs)
scaffold0005 (15-273)||(263492-263750)
[»] scaffold0765 (1 HSPs)
scaffold0765 (15-269)||(6037-6291)
[»] chr7 (37 HSPs)
chr7 (21-273)||(14144888-14145140)
chr7 (22-248)||(11385200-11385426)
chr7 (15-273)||(18050717-18050975)
chr7 (22-273)||(14283145-14283396)
chr7 (34-272)||(12712446-12712684)
chr7 (22-256)||(15099374-15099608)
chr7 (22-248)||(16947243-16947469)
chr7 (22-269)||(12798275-12798519)
chr7 (21-273)||(19150238-19150490)
chr7 (21-273)||(20749637-20749889)
chr7 (22-256)||(12459872-12460106)
chr7 (16-273)||(26091563-26091820)
chr7 (16-273)||(26115355-26115612)
chr7 (16-273)||(40924582-40924839)
chr7 (52-269)||(13676682-13676899)
chr7 (16-254)||(49155547-49155785)
chr7 (16-256)||(21755656-21755896)
chr7 (22-273)||(14261017-14261268)
chr7 (16-197)||(13024647-13024828)
chr7 (40-256)||(13965457-13965673)
chr7 (25-182)||(13004783-13004940)
chr7 (71-211)||(12203620-12203760)
chr7 (58-210)||(9591653-9591805)
chr7 (58-101)||(12690896-12690939)
chr7 (58-101)||(15157889-15157932)
chr7 (58-104)||(8710997-8711043)
chr7 (60-104)||(10873853-10873897)
chr7 (58-210)||(16726270-16726422)
chr7 (58-210)||(17703284-17703436)
chr7 (58-110)||(44788183-44788235)
chr7 (58-101)||(11234045-11234088)
chr7 (58-101)||(11549934-11549977)
chr7 (58-104)||(14335788-14335834)
chr7 (58-104)||(18587003-18587049)
chr7 (58-101)||(13689436-13689479)
chr7 (58-101)||(14957903-14957946)
chr7 (55-101)||(18181138-18181184)
[»] scaffold0239 (1 HSPs)
scaffold0239 (15-273)||(9567-9825)
[»] scaffold0067 (4 HSPs)
scaffold0067 (22-248)||(64389-64615)
scaffold0067 (22-248)||(48967-49193)
scaffold0067 (22-248)||(58001-58227)
scaffold0067 (22-256)||(29907-30141)
[»] chr2 (28 HSPs)
chr2 (22-273)||(19716341-19716592)
chr2 (22-273)||(19720904-19721155)
chr2 (15-273)||(12577221-12577479)
chr2 (22-248)||(23097342-23097568)
chr2 (25-269)||(23274465-23274709)
chr2 (16-273)||(20848457-20848711)
chr2 (58-209)||(28350807-28350958)
chr2 (85-209)||(21901469-21901593)
chr2 (88-212)||(24817230-24817354)
chr2 (65-210)||(23116426-23116571)
chr2 (58-107)||(44382933-44382982)
chr2 (58-110)||(17002028-17002080)
chr2 (58-101)||(24265407-24265450)
chr2 (58-104)||(9338616-9338662)
chr2 (58-104)||(9487250-9487296)
chr2 (55-101)||(10871887-10871933)
chr2 (58-104)||(16984274-16984320)
chr2 (58-104)||(22322705-22322751)
chr2 (58-104)||(24713068-24713114)
chr2 (178-272)||(24657138-24657232)
chr2 (58-104)||(27374303-27374349)
chr2 (58-95)||(16931598-16931635)
chr2 (149-210)||(23205245-23205306)
chr2 (149-210)||(23676849-23676910)
chr2 (158-210)||(21320463-21320515)
chr2 (58-101)||(24874113-24874156)
chr2 (148-210)||(11351161-11351223)
chr2 (148-210)||(22462931-22462993)
[»] chr5 (42 HSPs)
chr5 (15-273)||(17266293-17266551)
chr5 (16-247)||(22505856-22506087)
chr5 (21-210)||(21870243-21870432)
chr5 (21-210)||(21874523-21874712)
chr5 (16-256)||(20345450-20345690)
chr5 (16-256)||(25851240-25851480)
chr5 (16-256)||(14883951-14884191)
chr5 (16-248)||(23077865-23078097)
chr5 (22-248)||(23563134-23563360)
chr5 (85-209)||(23669847-23669971)
chr5 (22-207)||(21983143-21983328)
chr5 (22-207)||(21560991-21561176)
chr5 (55-104)||(27521741-27521790)
chr5 (85-206)||(43122685-43122806)
chr5 (123-209)||(16258103-16258189)
chr5 (123-209)||(22591822-22591908)
chr5 (123-209)||(22595377-22595463)
chr5 (64-192)||(21331997-21332125)
chr5 (58-101)||(14996744-14996787)
chr5 (58-101)||(22138006-22138049)
chr5 (58-101)||(22329892-22329935)
chr5 (58-137)||(23474499-23474578)
chr5 (58-101)||(27682405-27682448)
chr5 (58-104)||(16359837-16359883)
chr5 (64-210)||(26735736-26735882)
chr5 (58-104)||(27665508-27665554)
chr5 (58-104)||(34569829-34569875)
chr5 (58-104)||(40712115-40712161)
chr5 (169-254)||(20779083-20779168)
chr5 (57-210)||(21883007-21883160)
chr5 (58-210)||(18782346-18782498)
chr5 (169-273)||(22465101-22465205)
chr5 (58-101)||(19773298-19773341)
chr5 (58-101)||(27613694-27613737)
chr5 (58-101)||(41774180-41774223)
chr5 (148-210)||(23526283-23526345)
chr5 (57-210)||(23461203-23461356)
chr5 (58-101)||(22351257-22351300)
chr5 (58-101)||(29473078-29473121)
chr5 (58-101)||(37288501-37288544)
chr5 (169-254)||(20824623-20824708)
chr5 (169-254)||(28892055-28892140)
[»] scaffold0034 (3 HSPs)
scaffold0034 (25-273)||(11696-11944)
scaffold0034 (22-269)||(1739-1986)
scaffold0034 (94-254)||(70657-70817)
[»] scaffold0476 (1 HSPs)
scaffold0476 (22-248)||(332-558)
[»] scaffold1299 (1 HSPs)
scaffold1299 (22-248)||(1635-1861)
[»] chr6 (39 HSPs)
chr6 (22-248)||(21566920-21567146)
chr6 (22-248)||(24515343-24515569)
chr6 (23-273)||(18797791-18798041)
chr6 (22-248)||(14376845-14377071)
chr6 (25-269)||(34642517-34642762)
chr6 (52-273)||(19438103-19438324)
chr6 (41-248)||(19456149-19456356)
chr6 (41-248)||(19466294-19466501)
chr6 (22-256)||(10465777-10466011)
chr6 (16-273)||(24367501-24367758)
chr6 (22-204)||(25771014-25771196)
chr6 (66-206)||(21474768-21474908)
chr6 (85-234)||(19486286-19486435)
chr6 (64-210)||(23081587-23081733)
chr6 (25-182)||(19881588-19881745)
chr6 (119-209)||(8720731-8720821)
chr6 (119-209)||(16813805-16813895)
chr6 (21-210)||(30677952-30678141)
chr6 (22-254)||(15462456-15462688)
chr6 (110-204)||(25958770-25958864)
chr6 (85-273)||(20010493-20010682)
chr6 (55-104)||(28312897-28312946)
chr6 (58-101)||(25115822-25115865)
chr6 (58-104)||(16575157-16575203)
chr6 (58-104)||(16620177-16620223)
chr6 (55-104)||(28260162-28260211)
chr6 (55-104)||(28285705-28285754)
chr6 (55-104)||(28338911-28338960)
chr6 (59-210)||(21764976-21765127)
chr6 (58-101)||(22829354-22829397)
chr6 (58-101)||(24292750-24292793)
chr6 (54-212)||(18182349-18182507)
chr6 (58-104)||(29589407-29589453)
chr6 (55-92)||(27205901-27205938)
chr6 (55-92)||(27243290-27243327)
chr6 (58-101)||(2871770-2871813)
chr6 (58-101)||(5836196-5836239)
chr6 (178-273)||(27559054-27559149)
chr6 (148-208)||(25756670-25756730)
[»] scaffold0222 (2 HSPs)
scaffold0222 (15-273)||(267-525)
scaffold0222 (22-256)||(21097-21331)
[»] chr4 (38 HSPs)
chr4 (15-273)||(51603569-51603827)
chr4 (15-273)||(53750247-53750505)
chr4 (22-273)||(16150873-16151124)
chr4 (22-273)||(16155019-16155270)
chr4 (22-273)||(14993151-14993402)
chr4 (22-273)||(15073596-15073847)
chr4 (16-273)||(3261572-3261829)
chr4 (34-248)||(18259703-18259917)
chr4 (16-273)||(20893268-20893525)
chr4 (22-248)||(15267038-15267264)
chr4 (16-273)||(29450315-29450572)
chr4 (16-256)||(11204010-11204250)
chr4 (40-273)||(7357504-7357737)
chr4 (16-273)||(44658644-44658901)
chr4 (94-254)||(27903641-27903801)
chr4 (25-251)||(13879368-13879594)
chr4 (58-210)||(14697401-14697553)
chr4 (19-209)||(8708978-8709168)
chr4 (58-210)||(13513650-13513802)
chr4 (64-210)||(8336-8482)
chr4 (64-210)||(16219488-16219634)
chr4 (64-210)||(16222808-16222954)
chr4 (57-210)||(18604378-18604531)
chr4 (64-205)||(15602-15743)
chr4 (58-107)||(8389812-8389861)
chr4 (58-101)||(8050186-8050229)
chr4 (58-101)||(14300542-14300585)
chr4 (58-104)||(12480003-12480049)
chr4 (58-104)||(16233555-16233601)
chr4 (58-104)||(17091712-17091758)
chr4 (58-104)||(19775356-19775402)
chr4 (58-104)||(23959150-23959196)
chr4 (58-104)||(27714739-27714785)
chr4 (58-101)||(14683973-14684016)
chr4 (58-101)||(40476446-40476489)
chr4 (58-210)||(18224033-18224185)
chr4 (58-101)||(19635542-19635585)
chr4 (57-107)||(14162873-14162923)
[»] scaffold0023 (3 HSPs)
scaffold0023 (22-273)||(164188-164439)
scaffold0023 (148-210)||(30487-30549)
scaffold0023 (65-210)||(43283-43428)
[»] scaffold0010 (3 HSPs)
scaffold0010 (22-248)||(39120-39346)
scaffold0010 (58-210)||(14753-14905)
scaffold0010 (169-273)||(180773-180877)
[»] scaffold0058 (1 HSPs)
scaffold0058 (22-248)||(22413-22639)
[»] scaffold0076 (1 HSPs)
scaffold0076 (16-245)||(53204-53433)
[»] scaffold0664 (1 HSPs)
scaffold0664 (22-273)||(7304-7555)
[»] scaffold0235 (2 HSPs)
scaffold0235 (15-273)||(8242-8500)
scaffold0235 (15-273)||(18456-18714)
[»] scaffold1914 (1 HSPs)
scaffold1914 (15-251)||(1010-1246)
[»] scaffold1530 (1 HSPs)
scaffold1530 (25-244)||(799-1018)
[»] scaffold0706 (1 HSPs)
scaffold0706 (22-269)||(4996-5243)
[»] chr1 (32 HSPs)
chr1 (22-273)||(20832757-20833007)
chr1 (22-273)||(21742408-21742659)
chr1 (16-256)||(20074559-20074799)
chr1 (16-256)||(21961327-21961567)
chr1 (25-248)||(19857582-19857805)
chr1 (22-248)||(21738892-21739118)
chr1 (16-273)||(31536847-31537104)
chr1 (40-256)||(52989041-52989257)
chr1 (16-248)||(24096465-24096697)
chr1 (16-256)||(20297683-20297923)
chr1 (16-273)||(38909676-38909933)
chr1 (22-273)||(22015601-22015852)
chr1 (16-273)||(48426156-48426413)
chr1 (16-273)||(37680332-37680589)
chr1 (25-209)||(18273114-18273298)
chr1 (85-273)||(20853679-20853867)
chr1 (45-212)||(16379407-16379574)
chr1 (57-210)||(21228447-21228600)
chr1 (55-107)||(41350560-41350612)
chr1 (45-212)||(21752360-21752527)
chr1 (55-101)||(51330384-51330430)
chr1 (58-107)||(16347490-16347539)
chr1 (58-107)||(16354138-16354187)
chr1 (58-104)||(33387924-33387970)
chr1 (58-134)||(21045046-21045122)
chr1 (57-208)||(17041907-17042057)
chr1 (58-101)||(19109791-19109834)
chr1 (58-101)||(21833723-21833766)
chr1 (58-137)||(22117102-22117181)
chr1 (58-101)||(21842633-21842676)
chr1 (58-101)||(22400741-22400784)
chr1 (57-107)||(22402010-22402060)
[»] scaffold0072 (1 HSPs)
scaffold0072 (15-256)||(54330-54571)
[»] scaffold1433 (1 HSPs)
scaffold1433 (22-248)||(1098-1324)
[»] scaffold0404 (1 HSPs)
scaffold0404 (22-248)||(8035-8261)
[»] scaffold0156 (1 HSPs)
scaffold0156 (22-256)||(37222-37456)
[»] scaffold0074 (1 HSPs)
scaffold0074 (22-248)||(15363-15589)
[»] scaffold0004 (3 HSPs)
scaffold0004 (22-248)||(319534-319760)
scaffold0004 (94-248)||(325998-326151)
scaffold0004 (96-234)||(200338-200476)
[»] scaffold0518 (1 HSPs)
scaffold0518 (22-173)||(2197-2348)
[»] scaffold0108 (1 HSPs)
scaffold0108 (22-269)||(50375-50622)
[»] scaffold0053 (3 HSPs)
scaffold0053 (21-248)||(62558-62785)
scaffold0053 (148-248)||(65211-65311)
scaffold0053 (22-127)||(65109-65214)
[»] scaffold0192 (1 HSPs)
scaffold0192 (25-242)||(29824-30041)
[»] scaffold0046 (1 HSPs)
scaffold0046 (21-273)||(70374-70626)
[»] scaffold0020 (2 HSPs)
scaffold0020 (25-273)||(98373-98621)
scaffold0020 (22-273)||(176253-176504)
[»] scaffold0420 (1 HSPs)
scaffold0420 (30-273)||(8880-9123)
[»] scaffold0243 (2 HSPs)
scaffold0243 (25-248)||(9562-9785)
scaffold0243 (64-210)||(23774-23920)
[»] scaffold0029 (4 HSPs)
scaffold0029 (74-273)||(115828-116027)
scaffold0029 (169-273)||(93828-93932)
scaffold0029 (58-101)||(107600-107643)
scaffold0029 (158-210)||(8543-8595)
[»] scaffold0167 (1 HSPs)
scaffold0167 (22-248)||(5344-5570)
[»] scaffold0106 (1 HSPs)
scaffold0106 (22-248)||(34628-34854)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-268)||(42969-43215)
[»] scaffold0865 (1 HSPs)
scaffold0865 (22-206)||(1059-1243)
[»] scaffold0751 (1 HSPs)
scaffold0751 (21-269)||(5451-5698)
[»] scaffold0266 (1 HSPs)
scaffold0266 (21-273)||(16903-17155)
[»] scaffold0133 (1 HSPs)
scaffold0133 (22-206)||(28072-28256)
[»] scaffold0434 (1 HSPs)
scaffold0434 (22-210)||(5689-5877)
[»] scaffold0026 (1 HSPs)
scaffold0026 (25-273)||(51917-52165)
[»] scaffold0017 (1 HSPs)
scaffold0017 (34-269)||(4252-4487)
[»] scaffold0011 (2 HSPs)
scaffold0011 (22-269)||(153762-154009)
scaffold0011 (72-137)||(23370-23435)
[»] scaffold1517 (1 HSPs)
scaffold1517 (22-256)||(1274-1508)
[»] scaffold1426 (1 HSPs)
scaffold1426 (40-273)||(1412-1645)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-248)||(663-896)
[»] scaffold0001 (1 HSPs)
scaffold0001 (16-256)||(514134-514374)
[»] scaffold0118 (1 HSPs)
scaffold0118 (16-256)||(744-984)
[»] scaffold0031 (1 HSPs)
scaffold0031 (22-229)||(115934-116141)
[»] scaffold0367 (1 HSPs)
scaffold0367 (34-248)||(8820-9034)
[»] scaffold0146 (1 HSPs)
scaffold0146 (22-248)||(71-297)
[»] scaffold0041 (1 HSPs)
scaffold0041 (16-273)||(42001-42258)
[»] scaffold0317 (1 HSPs)
scaffold0317 (52-269)||(2901-3118)
[»] scaffold1032 (1 HSPs)
scaffold1032 (21-256)||(601-836)
[»] scaffold0405 (1 HSPs)
scaffold0405 (22-273)||(5868-6119)
[»] scaffold0335 (1 HSPs)
scaffold0335 (22-273)||(4091-4342)
[»] scaffold0276 (1 HSPs)
scaffold0276 (16-273)||(23704-23961)
[»] scaffold0151 (1 HSPs)
scaffold0151 (22-248)||(329-555)
[»] scaffold0523 (2 HSPs)
scaffold0523 (34-269)||(5710-5942)
scaffold0523 (16-256)||(11524-11764)
[»] scaffold0188 (1 HSPs)
scaffold0188 (16-200)||(33153-33337)
[»] scaffold0035 (1 HSPs)
scaffold0035 (22-273)||(6071-6321)
[»] scaffold0490 (2 HSPs)
scaffold0490 (22-164)||(3240-3382)
scaffold0490 (57-110)||(320-373)
[»] scaffold0054 (2 HSPs)
scaffold0054 (93-269)||(63377-63553)
scaffold0054 (22-73)||(63326-63377)
[»] scaffold0310 (1 HSPs)
scaffold0310 (16-251)||(11265-11500)
[»] scaffold0104 (1 HSPs)
scaffold0104 (34-269)||(43218-43453)
[»] scaffold2165 (1 HSPs)
scaffold2165 (55-256)||(623-824)
[»] scaffold2062 (1 HSPs)
scaffold2062 (34-248)||(671-885)
[»] scaffold1056 (1 HSPs)
scaffold1056 (22-248)||(2011-2236)
[»] scaffold1845 (1 HSPs)
scaffold1845 (16-236)||(1085-1305)
[»] scaffold0261 (2 HSPs)
scaffold0261 (34-248)||(12213-12425)
scaffold0261 (34-248)||(20393-20605)
[»] scaffold0203 (2 HSPs)
scaffold0203 (145-273)||(764-892)
scaffold0203 (22-104)||(3838-3920)
[»] scaffold0068 (1 HSPs)
scaffold0068 (16-256)||(66889-67129)
[»] scaffold0585 (1 HSPs)
scaffold0585 (32-150)||(657-775)
[»] scaffold0190 (1 HSPs)
scaffold0190 (40-210)||(30131-30301)
[»] scaffold0100 (1 HSPs)
scaffold0100 (21-210)||(16395-16584)
[»] scaffold0009 (2 HSPs)
scaffold0009 (16-248)||(251910-252142)
scaffold0009 (64-210)||(229681-229827)
[»] scaffold0447 (1 HSPs)
scaffold0447 (64-210)||(1693-1839)
[»] scaffold0383 (1 HSPs)
scaffold0383 (64-210)||(4557-4703)
[»] scaffold0130 (2 HSPs)
scaffold0130 (71-206)||(3728-3863)
scaffold0130 (178-210)||(7722-7754)
[»] scaffold0443 (1 HSPs)
scaffold0443 (175-273)||(12063-12161)
[»] scaffold0077 (1 HSPs)
scaffold0077 (64-210)||(57443-57589)
[»] scaffold0708 (1 HSPs)
scaffold0708 (72-248)||(4982-5158)
[»] scaffold0270 (2 HSPs)
scaffold0270 (64-210)||(7202-7348)
scaffold0270 (64-210)||(14332-14478)
[»] scaffold0609 (2 HSPs)
scaffold0609 (110-209)||(1269-1368)
scaffold0609 (25-188)||(7908-8071)
[»] scaffold0165 (1 HSPs)
scaffold0165 (62-161)||(12322-12421)
[»] scaffold0075 (2 HSPs)
scaffold0075 (64-210)||(48059-48205)
scaffold0075 (64-205)||(55300-55441)
[»] scaffold0457 (1 HSPs)
scaffold0457 (16-113)||(13835-13932)
[»] scaffold0177 (2 HSPs)
scaffold0177 (57-210)||(14863-15016)
scaffold0177 (148-210)||(11269-11331)
[»] scaffold0080 (1 HSPs)
scaffold0080 (57-210)||(32208-32361)
[»] scaffold0044 (2 HSPs)
scaffold0044 (57-210)||(17489-17642)
scaffold0044 (58-101)||(3859-3902)
[»] scaffold1881 (1 HSPs)
scaffold1881 (58-210)||(303-455)
[»] scaffold0079 (1 HSPs)
scaffold0079 (57-273)||(36764-36980)
[»] scaffold0042 (3 HSPs)
scaffold0042 (72-212)||(26679-26819)
scaffold0042 (148-210)||(36733-36795)
scaffold0042 (56-116)||(36641-36701)
[»] scaffold0018 (2 HSPs)
scaffold0018 (88-212)||(9204-9328)
scaffold0018 (72-211)||(23135-23274)
[»] scaffold0006 (1 HSPs)
scaffold0006 (64-204)||(104561-104701)
[»] scaffold1274 (1 HSPs)
scaffold1274 (64-137)||(20-93)
[»] scaffold0289 (1 HSPs)
scaffold0289 (57-210)||(117-270)
[»] scaffold0088 (2 HSPs)
scaffold0088 (40-113)||(30336-30409)
scaffold0088 (148-248)||(30225-30325)
[»] scaffold0122 (1 HSPs)
scaffold0122 (58-210)||(40330-40482)
[»] scaffold0113 (1 HSPs)
scaffold0113 (16-92)||(17686-17762)
[»] scaffold0040 (2 HSPs)
scaffold0040 (70-210)||(18174-18314)
scaffold0040 (64-210)||(110736-110882)
[»] scaffold0431 (1 HSPs)
scaffold0431 (58-101)||(10803-10846)
[»] scaffold0282 (1 HSPs)
scaffold0282 (87-210)||(13326-13449)
[»] scaffold0546 (1 HSPs)
scaffold0546 (64-210)||(208-354)
[»] scaffold0207 (1 HSPs)
scaffold0207 (64-210)||(4384-4530)
[»] scaffold0109 (1 HSPs)
scaffold0109 (64-210)||(12953-13099)
[»] scaffold0451 (1 HSPs)
scaffold0451 (57-210)||(13854-14007)
[»] scaffold0161 (1 HSPs)
scaffold0161 (122-211)||(36156-36245)
[»] scaffold1600 (1 HSPs)
scaffold1600 (41-137)||(468-564)
[»] scaffold0324 (1 HSPs)
scaffold0324 (58-210)||(2318-2470)
[»] scaffold0180 (1 HSPs)
scaffold0180 (109-205)||(30887-30983)
[»] scaffold0819 (1 HSPs)
scaffold0819 (149-208)||(445-504)
[»] scaffold0028 (3 HSPs)
scaffold0028 (58-97)||(11891-11930)
scaffold0028 (58-97)||(21419-21458)
scaffold0028 (61-101)||(55439-55479)
[»] scaffold0007 (1 HSPs)
scaffold0007 (58-101)||(49100-49143)
[»] scaffold0605 (1 HSPs)
scaffold0605 (112-254)||(1565-1707)
[»] scaffold0575 (1 HSPs)
scaffold0575 (64-210)||(9948-10094)
[»] scaffold0550 (1 HSPs)
scaffold0550 (148-210)||(10071-10133)
[»] scaffold0501 (1 HSPs)
scaffold0501 (68-210)||(253-395)
[»] scaffold0278 (1 HSPs)
scaffold0278 (64-210)||(3880-4026)
[»] scaffold0055 (1 HSPs)
scaffold0055 (62-104)||(22679-22721)
[»] scaffold0052 (1 HSPs)
scaffold0052 (62-104)||(7668-7710)
[»] scaffold0357 (1 HSPs)
scaffold0357 (65-210)||(17807-17952)
[»] scaffold0148 (1 HSPs)
scaffold0148 (21-134)||(2404-2517)
[»] scaffold0333 (1 HSPs)
scaffold0333 (70-210)||(18979-19119)
[»] scaffold0309 (2 HSPs)
scaffold0309 (185-269)||(12997-13081)
scaffold0309 (57-110)||(19827-19880)
[»] scaffold0181 (1 HSPs)
scaffold0181 (178-273)||(28871-28966)
[»] scaffold0081 (2 HSPs)
scaffold0081 (148-199)||(21944-21995)
scaffold0081 (148-199)||(37368-37419)
[»] scaffold1423 (1 HSPs)
scaffold1423 (148-210)||(291-353)
[»] scaffold0611 (1 HSPs)
scaffold0611 (148-210)||(9356-9418)
[»] scaffold0120 (1 HSPs)
scaffold0120 (148-210)||(14413-14475)
[»] scaffold0507 (1 HSPs)
scaffold0507 (58-139)||(11428-11509)
[»] scaffold0411 (1 HSPs)
scaffold0411 (57-110)||(8840-8893)
[»] scaffold0259 (1 HSPs)
scaffold0259 (58-95)||(8699-8736)
[»] scaffold0198 (1 HSPs)
scaffold0198 (60-101)||(30725-30766)
[»] scaffold0019 (1 HSPs)
scaffold0019 (169-210)||(171447-171488)
[»] scaffold0509 (1 HSPs)
scaffold0509 (153-205)||(12162-12214)
[»] scaffold0319 (1 HSPs)
scaffold0319 (57-101)||(6938-6982)
[»] scaffold0008 (2 HSPs)
scaffold0008 (178-210)||(179-211)
scaffold0008 (178-210)||(139553-139585)


Alignment Details
Target: scaffold0114 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 22 - 281
Target Start/End: Complemental strand, 40575 - 40316
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40575 aaagctcattataaggtgatgagtgagcgaagaggtatgggacaacagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 40476  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40475 atgatgagaggaggccgaataggagagatgctcctgctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 40376  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaagtgttgtga 281  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  40375 taagaagtgcttcaggtgtggttagaagggtcacatgttagcggattgcaagcgttgtga 40316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 30 - 273
Target Start/End: Original strand, 4644 - 4887
Alignment:
Q  30 ttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgag 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  4644 ttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgccccttttgacaagggaaagcaaagactgaatgatgag 4743  T
Q  130 aggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagt 229  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4744 aggaggccaaataggagagatgctcctgctgagatagtctgttataagtgtggccagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagt 4843  T
Q  230 gcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  4844 gcttcaggtgtggacagaagggtcacatgttagctgattgcaag 4887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 22 - 268
Target Start/End: Original strand, 17271 - 17517
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17271 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaaacaaagactga 17370  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17371 atgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatga 17470  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggatt 268  Q
    |||||||||||| ||||||| ||| ||||||||||  ||||||||||    
T  17471 gaagaagtgctttaggtgtgatcaaaagggtcacacattagcggatt 17517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 30 - 269
Target Start/End: Original strand, 22027515 - 22027754
Alignment:
Q  30 ttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgag 129  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22027515 ttataaggtgatgagtgagcgaagtggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagattgaatgatgag 22027614  T
Q  130 aggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagt 229  Q
    |||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22027615 aggaggcccaataggagagatgctcctgctgagatagtttgttacaagtgtggcgataaaggccacaagagtaatgtttgtaccaaagatgagaagaagt 22027714  T
Q  230 gcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    |||||||||||||||||||||||||||  ||||| |||||    
T  22027715 gcttcaggtgtggtcagaagggtcacacattagctgattg 22027754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 22054424 - 22054166
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||     
T  22054424 ggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacggcagagtcgtcctaagccgtacagtgcccctgctgataagggtaagcag 22054325  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  22054324 agacttaatgatgagaggaggccgaataggagagatgcttctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtacca 22054225  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  22054224 aggatgagaagaagtgcttcagatgtggtcagaagggtcaccttttagcggattgcaag 22054166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 31413753 - 31413985
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||  |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |    
T  31413753 gacaccaaagctcattacaaaatgatgagtgagcgaaggggtaagggacagcagagtcgtcctaaaccttacagcgcccctgctgacaagggaaagcaga 31413852  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    || ||||||||||||||||||| || |||||||||||||||  ||| || || ||||  |||||||| || |||||||| ||||| |||| ||||   |     
T  31413853 gaatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccataagagcaatgcttgtggtag 31413952  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||| |||||| || ||||||||||||||    
T  31413953 agatgagaggaagtgttttaggtgtggtcagaa 31413985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 21 - 248
Target Start/End: Complemental strand, 21928983 - 21928756
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||| || || |||    
T  21928983 caaagctcattacaaggtgatgagtgagcgtagaggtaagggacaacagagtcgtcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggctg 21928884  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| |  |||||||||||||||||||||||  | ||||  ||||||||||| || |||||| ||||||||||  ||  |  |||||    
T  21928883 aatgatgagaggaggcctaggaggagagatgctcctactgagattctttgtttcaagtgtggcgaaaagggccacgagagtaatgtaagtgaccgagatg 21928784  T
Q  221 agaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||| ||||| ||||| |||||    
T  21928783 agaagaagtgtttcagatgtggacagaa 21928756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 40 - 254
Target Start/End: Original strand, 16268469 - 16268683
Alignment:
Q  40 atgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactgaatgatgagaggaggccg 138  Q
    ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| | ||||||||| |||||||| |||| ||| |||||| ||||||||     
T  16268469 atgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcttgctgacaaaggaaagcagaaga-tgagtgatgacaggaggcct 16268567  T
Q  139 aataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggt 238  Q
    || | ||||||||||||| ||||||| || ||||| |||||||| |||||||||||||||||||||||||||   |||||||||| ||||||||||||||    
T  16268568 aagaagagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggt 16268667  T
Q  239 gtggtcagaagggtca 254  Q
    ||||||||||||||||    
T  16268668 gtggtcagaagggtca 16268683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 22374423 - 22374172
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| ||| || || |||||||| |    
T  22374423 aaagctcattataaggtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgcccctgctgtcaaaggtaaacaaagactta 22374324  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||| ||||||||||| |  ||||||||| ||||||||||||| |||||||  |||||||| || |||| ||||||||||||||| |||  |   |||||    
T  22374323 atgaggagaggaggcctaggaggagagattctcctactgagattgtctgtttcaagtgtggtgaaaaagaccacaagagtaatgtatgtgaccgtgatga 22374224  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||||| || ||||||||  |||| || ||||  ||||| |||||||||    
T  22374223 aaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaag 22374172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 28984471 - 28984214
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||| |||||||||||||| |    
T  28984471 gacaccaaagctcattacaagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgcggacaagggaaagcaga 28984372  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    |  ||  |||||| |||||||| || ||||||||||||||   |||||| || ||||| |||||||| |||||||||||||||||||||||||||   |     
T  28984371 ggatgggtgatgataggaggcccaagaggagagatgctccagttgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 28984272  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  28984271 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 28984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 19985735 - 19985483
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| || || |||||| ||||||||||||| || ||||| ||||||||||| |||||||| || || ||  ||    
T  19985735 caaagctcattacaaggtgatgagtgagcgcagtggcaagggatagcagagtcgtccgaagccgtatagtgcccctgcggacaagggtaaacagaggatg 19985636  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    | ||||||||||||||| || ||||||||||||||||||||||| || ||||  ||||||||||| ||| |||||||||||||||| |||  |   ||||    
T  19985635 attgatgagaggaggcctaagaggagagatgctcctactgagattgtttgtttcaagtgtggcgaaaaaagccacaagagtaatgtatgtgaccgtgatg 19985536  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||  ||||| ||||| |||||  | ||||  ||||| |||||||||    
T  19985535 agaagaagtatttcagatgtggacagaaatgacacacattagctgattgcaag 19985483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 29300653 - 29300878
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactg 120  Q
    ||||||| ||| ||||| ||||||||| | || |||||||||||  |||||||||||||||| |||||||| ||||||||||| || ||||| |||| ||    
T  29300653 aaagctcattacaaggtaatgagtgagaggaggggtaagggacattagagtcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaaga-tg 29300751  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    |||||||| |||||||| || ||| |||||| |||  |||| || || |||| ||||||||| || | |||||||||||| |||| ||||   | |||||    
T  29300752 aatgatgataggaggcccaagaggggagatgttcccgctgaaattgtttgttttaagtgtggtgaaagaggccacaagagcaatgcttgtggtagagatg 29300851  T
Q  221 agaagaagtgcttcaggtgtggtcaga 247  Q
    | | |||||| || |||||||||||||    
T  29300852 aaaggaagtgttttaggtgtggtcaga 29300878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 20391641 - 20391454
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||||||||| ||||||||||| ||    || || |||||  ||||||| || || |||||||| ||||||||||| || || |||||| ||    
T  20391641 caaagctcattataaggttatgagtgagcggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgctcctgctgacaaagggaaacaaagattg 20391542  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgttt 208  Q
    |||||||||||||| || || || ||||||| |||| ||||||| || || || |||||||| ||||| |||||||||||||||||||    
T  20391541 aatgatgagaggagacctaagagtagagatgttccttctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgttt 20391454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 22524041 - 22523876
Alignment:
Q  45 tgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaatagg 144  Q
    |||||||| ||| || || |||||||||||||| || || ||||||||||||||||| |||||||| |||||| | |||||||||||| |||| |  | |    
T  22524041 tgagcgaaaaggcaaaggtcagcagagtcgtccaaagccttacagtgcccctgctgataagggaaaacaaagagttaatgatgagaggcggcctaggaag 22523942  T
Q  145 agagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||||||||  |||||| || || ||||  ||||||||||||||||||| |||||||| ||||    
T  22523941 aaagatgctcctgttgagattgtgtgctatacttgtggcgagaaaggccacaggagtaatgcttgt 22523876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 6606784 - 6606883
Alignment:
Q  110 agcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||| |||||||||||||||| || || || ||||||| |||||||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  6606784 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 6606883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 19481335 - 19481387
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  19481335 ggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggg 19481387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 30310407 - 30310559
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| |||||||| || |||||||||||||| ||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||||     
T  30310407 aagggtcagcagagtcgccctaaaccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 30310506  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || || ||||  || |||||||||||||||||||||||||||||||||    
T  30310507 cggatattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 30310559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 19115915 - 19115872
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  19115915 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 19115872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 20015529 - 20015572
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  20015529 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 20015572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 17671288 - 17671334
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  17671288 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 17671334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 15536901 - 15536749
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| ||||| || || ||||||||||| || ||||| ||||| ||| ||   ||||| ||| |||| || | ||  |||||||||     
T  15536901 aagggccagcagagtcgccctaagccttatagtgcccctgccgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctcctt 15536802  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | |||||  | |||| ||| ||||||||  |||||||||||||||||||||||    
T  15536801 cggagattatttgttttaattgtggcgaagaaggccacaagagtaatgtttgt 15536749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 21672033 - 21671881
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||||||||| || |||||||| |||||||| ||||| || || ||| ||   ||||| ||| |  | |  | || ||||||||||     
T  21672033 aagggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggtagatgataggcgctctagaaagaaagatgctcctg 21671934  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     |||||| ||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  21671933 ttgagattgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgt 21671881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 18860092 - 18860049
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  18860092 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 18860049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 22126225 - 22126268
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  22126225 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 22126268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 21163883 - 21163945
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| ||||||| ||||||| ||| ||||||||||||| ||||||||| |||| ||||    
T  21163883 gatgctcctgctgagattgtctgttttaattgtggcgagaaagaccacaagagcaatgcttgt 21163945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 32603664 - 32603511
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||| ||||| ||| ||   ||||| ||| | || || | ||  |||||||||    
T  32603664 taagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaagcagagaatggtcgatgataggcgacctaagaagaaggatgctcct 32603565  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     | || || || ||||  || ||||| | |||||||||||||||||||||||||    
T  32603564 tcggaaattgtttgtttcaactgtggtgggaaaggccacaagagtaatgtttgt 32603511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 22043345 - 22043193
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||  ||||| || || ||||||||| |||||||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||| |    
T  22043345 aagggccagcagagtcaccctaagccttatagtgcccctactgacaagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctccaa 22043246  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |||||||    ||||  || ||||| |||||||||||||||||||||||||||    
T  22043245 ctgagattacttgtttcaattgtggtgagaaaggccacaagagtaatgtttgt 22043193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 22117441 - 22117478
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccc 95  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  22117441 aagggacagcaaagtcgtcctaagccgtacagtgcccc 22117478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 203905 - 203647
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  203905 ggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcag 203806  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    |||||||||||||||||||||||   ||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  203805 agactgaatgatgagaggaggcccgttaggagagatgctcctggtgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtacca 203706  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  203705 aggatgagaagaagtgcttcaggtgtggtcagaagggtcaccttttagcggattgcaag 203647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 424789 - 424746
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||    
T  424789 aagggacagcatagtcgtcctaagccgtacaatgcccctgctga 424746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 16831533 - 16831791
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||| |||||     
T  16831533 ggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcatcctaagccgtatagtgcccctgctgataagggtaagcag 16831632  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  16831633 agacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtacca 16831732  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16831733 aggatgagaagaagtgcttcaggtgtggtcagaagggtcacgtgttagcggactgcaag 16831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 16384377 - 16384635
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||     
T  16384377 ggacagcaaagctcattataaggtgatgagtgagcgaagaggtaagggacaacagagtcgtcctaagccatacagtgcccctgctgacaagggtaagcag 16384476  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||    
T  16384477 agacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaagtccacaagagtaacgtttgtacca 16384576  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  16384577 aggatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttggctgattgcaag 16384635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 13945148 - 13944890
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||  |||| ||||| |||||     
T  13945148 ggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcag 13945049  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||| ||||||||| |||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||    
T  13945048 agacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtacca 13944949  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||||    
T  13944948 aggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaag 13944890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 8744395 - 8744653
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||  |||| ||||| |||||     
T  8744395 ggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcag 8744494  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||| ||||||||| |||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||    
T  8744495 agacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtacca 8744594  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||||    
T  8744595 aggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaag 8744653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 12357539 - 12357786
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||||| | || ||||    
T  12357539 aaagctcattacaaggtgatgagtgagcgcagaggtaagggacatcagagtcgtcctaaaccatatagtgctcctgctgacaagggaaagtagaggctga 12357638  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||||||||| ||||| ||||||| || || || ||||||||||| |||||||||||||||||||| |||   ||||||||    
T  12357639 atgatgagaggaggcccaagaggagagatactcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctgtgataaagatga 12357738  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||||||||||||||| || ||||  ||||| |||||    
T  12357739 gaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattg 12357786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 31942020 - 31941786
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||||||||||||||| |||||  | || ||| ||||||||||||| || ||||| ||||| ||||||||||| || ||||| |   |||    
T  31942020 aaagctcattataaggtgatgagtgatcgaaggagcaaaggatagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagttga 31941921  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| ||||||||| |||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31941920 atgatgagaggaggcccaataggagaaatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 31941821  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||||| |||||||||||||||||||| ||||    
T  31941820 gaagaagtgtttcaggtgtggtcagaagggacaca 31941786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 17189491 - 17189265
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || ||||| ||||| |||||||||||||| || ||||||||||| |||||| ||||||||||||| ||| | |    
T  17189491 aaagctcattacaaggtgatgagtgaccgcagaggcaagggccagcagagtcgtccgaagccgtacagtgctcctgctaacaagggaaagcagagattta 17189392  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||| | || |||||||||||||||  ||| || || |||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  17189391 atgatgagaggaggtccaagaggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgtttgtaccaaagatga 17189292  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  17189291 gaagaagtgcttcaggtgtggtcagaa 17189265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 18131359 - 18131585
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| || ||||||||||| || |||||||| ||||||||||||||||||||||| || ||||| ||||||||||| ||||| || |||||||    
T  18131359 aaagctcattacaaagtgatgagtgaacggagaggtaaaggacagcagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacagagactga 18131458  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    || ||||||||||||| || |||||||||||||||  |||||| |  || || ||||||||||||||||||||||||||||||||||||   ||||||||    
T  18131459 ataatgagaggaggcccaagaggagagatgctcctgttgagattgattgctacaagtgtggcgagaaaggccacaagagtaatgtttgtgataaagatga 18131558  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  18131559 gaagaagtgcttcaggtgtggtcagaa 18131585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 256
Target Start/End: Original strand, 31692197 - 31692431
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||||||||||||||| |||||  | || ||||||||||||||||| || ||||| ||||| ||||||||||| || ||||| |   |||    
T  31692197 aaagctcattataaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagttga 31692296  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| ||||||||| ||||| || ||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  31692297 atgatgagaggaggcccaataggagaaatgcttctgctgagatcgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtaccaaagatga 31692396  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||||| |||||||||||| ||||||| ||||    
T  31692397 gaagaagtgtttcaggtgtggttagaagggacaca 31692431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 24190420 - 24190195
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||| ||| || ||||| ||||  |||||||||||||| || ||||||||||| |||||||||||||||||||| ||| |||    
T  24190420 aaagctcattacaaggtgatgactgaccgcagaggcaaggc-cagcagagtcgtccgaagccgtacagtgctcctgctgacaagggaaagcagagattga 24190322  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||||||||||   || |||||||||||||||  ||| || || |||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  24190321 atgatgagaggaggtacaagaggagagatgctcctgttgatattgtttgttttaagtgtggcgagaaaggccacaaaagtaacgtttgtaccaaagatga 24190222  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  24190221 gaagaagtgcttcaggtgtggtcagaa 24190195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 269
Target Start/End: Original strand, 14290543 - 14290791
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| || || || || |||    
T  14290543 caaagctcattataaagtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctg 14290642  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || |||||||||||||||||||||||  | || |  |||||||| ||||||||||||||||||||||| |||     |||||    
T  14290643 aatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgattgagatg 14290742  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||| |||||||| ||||| || ||||  ||||| |||||    
T  14290743 agaagaagtgctttaggtgtggacagaaaggacacactttagctgattg 14290791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 243
Target Start/End: Original strand, 16825291 - 16825512
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||||| ||||||||| || ||||| ||||||||| |||||||||| ||| | ||| |||    
T  16825291 aaagctcattacaaggtgatgagtgagcgcagaggcaagggacagctgagtcgtccgaagccgtatagtgcccctcctgacaagggtaagtagagattga 16825390  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    | |||||||||||||| || | |||||||||||||||||| || || ||||  |||||||| || ||||||||||||||||||||||||  |   |||||    
T  16825391 aagatgagaggaggcccaagatgagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgtgatga 16825490  T
Q  222 gaagaagtgcttcaggtgtggt 243  Q
    ||||||||||||||||||||||    
T  16825491 gaagaagtgcttcaggtgtggt 16825512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 47127067 - 47126810
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||||||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  47127067 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 47126968  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    |  ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |     
T  47126967 ggatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 47126868  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  47126867 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 47126810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 12857508 - 12857692
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||| ||||| ||||||||||| || || ||| ||||||    
T  12857508 aaagctcattataaggtgatgagtgagcgtagaggcaagggacagtagagtcgtccaaaaccgtatagtgctcctgctgacaaaggtaaacaaggactga 12857607  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgt 206  Q
    |||||||||||||||| || ||||||||||||||||||||||| |||||||  |||||||| || || ||||||| |||||||||    
T  12857608 atgatgagaggaggcctaaaaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaagggccacatgagtaatgt 12857692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 35983299 - 35983047
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| |||||| |||||||||||| | ||||||||||||||||||||| |||| |||||||| ||||| ||||||||||| || || || || |||    
T  35983299 caaagctcattataaagtgatgagtgagtgcagaggtaagggacagcagagttgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctg 35983200  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || ||||||||||||||||||| |||  | || |  |||||||| ||||||||||||||||||||||| |||  |  |||||    
T  35983199 aatgatgagaggaggcctaagaggagagatgctcctactgtgattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgaccgagatg 35983100  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||| ||||| ||||| ||||| || ||||  || || |||||||||    
T  35983099 agaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaag 35983047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 10409091 - 10408834
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||||||||||||| || |||||||| |||||||||||||| || || |    
T  10409091 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaccagagtcgtcctaagccttacagtgctcctgctgacaagggtaaacaga 10408992  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || ||||||||||||||  ||||||| || ||||| || ||||| |||||||||||||||||||||||||||   |    
T  10408991 aga-tgggtgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaaatgtggtgagaaaggccacaagagtaatgtttgtggaa 10408893  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  10408892 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 10408834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 34 - 248
Target Start/End: Original strand, 11958205 - 11958419
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||||||| |||||||| ||||||||||| || || || ||| |||||||||| ||||    
T  11958205 aaggtgatgagtgagaggagaggtaagggacagcagaatcgtcctaaaccttacagtgctcctgctgacaaagggaaacagagaatgaatgatgatagga 11958304  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||  || ||||||||||||||| |||| || || |||||||||||||| || ||||||||||| || |||| ||||   | |||||||| |||||| ||    
T  11958305 ggcttaagaggagagatgctcctgctgaaattgtttgttataagtgtggtgaaaaaggccacaaaagcaatgcttgtggtagagatgagaggaagtgttt 11958404  T
Q  234 caggtgtggtcagaa 248  Q
    |||||||||||||||    
T  11958405 caggtgtggtcagaa 11958419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 28757442 - 28757185
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  28757442 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 28757343  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  28757342 aga-tgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 28757244  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  28757243 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 28757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 16326713 - 16326955
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||| | ||||||||| | || || ||||||||||||||||||||||| ||  ||||||| ||||||||||| ||||||||||    
T  16326713 gacaccaaagctcattacaagataatgagtgagaggaggggcaagggacagcagagtcgtcctaagcctgacagtgctcctgctgacaaaggaaagcaaa 16326812  T
Q  116 gactgaatgatgagaggaggccgaataggagaga-tgctcctactgaga-tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacc 213  Q
       |||||||||| ||||| || || |||||||| ||||||| |||||| | || |||||||||||||| || |||||||||||||| |||||||||       
T  16326813 aggtgaatgatgataggagacccaagaggagagactgctcctgctgagacttgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggt 16326912  T
Q  214 aaagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    | |||||||| ||| || |||||||||||||||||||| ||||    
T  16326913 agagatgagaggaaatgtttcaggtgtggtcagaagggacaca 16326955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 12181461 - 12181239
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| |||||||| |||||||| ||||||||||  || ||||| ||||| |||||||||||||| ||| | ||  | |    
T  12181461 aaagctcattacaaggtgatgagtgaacgaagaggcaagggacaacagagtcgtctgaagccgtatagtgctcctgctgacaagggtaagtagaggttaa 12181362  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||| | || |||||||||||||||||||| ||  | || |  |||||||| || ||||||||||||||||| || |||   | ||||||    
T  12181361 atgatgagaggaggaccaagaggagagatgctcctactgacattttttgcttcaagtgtggtgaaaaaggccacaagagtaaagtctgtgatagagatga 12181262  T
Q  222 gaagaagtgcttcaggtgtggtc 244  Q
    ||||||||||||||| |||||||    
T  12181261 gaagaagtgcttcagttgtggtc 12181239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 273
Target Start/End: Original strand, 13317644 - 13317832
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcg 184  Q
    |||||||| ||||||||||| ||||| |||| | | ||||||||||||||||| |   ||||||||||||||  |||  | || ||||| |||||||| |    
T  13317644 tacagtgctcctgctgacaaaggaaaacaaatattaaatgatgagaggaggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtg 13317743  T
Q  185 agaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
      ||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||  | |||||||||||||||    
T  13317744 caaaaggccacaaaagtaatgtttgcaccaaagatgagaagaagtgtttcagatgtggtcaaaaaggtcatgttttagcggattgcaag 13317832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 248
Target Start/End: Complemental strand, 17494768 - 17494538
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgac----aagggaaagcaaag 116  Q
    |||||||| ||| ||||||||||||||||| ||||  |||||||| || |||||| | || || || ||||| ||||||| |    ||||| ||||| ||    
T  17494768 caaagctcattacaaggtgatgagtgagcgcagagccaagggacaacaaagtcgttcgaagccatatagtgctcctgctggctgagaagggtaagcagag 17494669  T
Q  117 actgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaa 216  Q
      | ||||||||||||||||| || ||||||||||||| ||||||||| || || |  || ||||| || ||||||||||||||||||||||||   | |    
T  17494668 gttaaatgatgagaggaggcccaagaggagagatgctcatactgagattgtttgcttcaaatgtggtgaaaaaggccacaagagtaatgtttgtgataga 17494569  T
Q  217 gatgagaagaagtgcttcaggtgtggtcagaa 248  Q
    ||||||||||||||| ||||||||||||||||    
T  17494568 gatgagaagaagtgc-tcaggtgtggtcagaa 17494538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 15008659 - 15008783
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcg 184  Q
    |||||||| | || |||||| ||| |||||||| |||||||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| |    
T  15008659 tacagtgctcatgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagtgtggtg 15008758  T
Q  185 agaaaggccacaagagtaatgtttg 209  Q
    ||| |||||||||||||||||||||    
T  15008759 agagaggccacaagagtaatgtttg 15008783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 15230671 - 15230531
Alignment:
Q  71 gtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctg 170  Q
    |||||||||| || || ||||| ||||||||||| || ||||||||| | ||||||||||||||||| || || | ||||| |||| ||||||| || ||    
T  15230671 gtcgtcctaagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttg 15230572  T
Q  171 ttataagtgtggcgagaaaggccacaagagtaatgtttgta 211  Q
     || |||||||| || || ||||||||||||||||||||||    
T  15230571 ctacaagtgtggtgaaaagggccacaagagtaatgtttgta 15230531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 15236539 - 15236399
Alignment:
Q  71 gtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctg 170  Q
    |||||||||| || || ||||| ||||||||||| || ||||||||| | ||||||||||||||||| || || | ||||| |||| ||||||| || ||    
T  15236539 gtcgtcctaagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttg 15236440  T
Q  171 ttataagtgtggcgagaaaggccacaagagtaatgtttgta 211  Q
     || |||||||| || || ||||||||||||||||||||||    
T  15236439 ctacaagtgtggtgaaaagggccacaagagtaatgtttgta 15236399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 11949107 - 11949184
Alignment:
Q  192 ccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||| |||||    
T  11949107 ccacaagagtaatgtttgtactaaagatgagaagaagtgcttcagatgtggtcagaaaggacacatattagctgattg 11949184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 2037025 - 2037111
Alignment:
Q  123 tgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  2037025 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 2037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 2040766 - 2040852
Alignment:
Q  123 tgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  2040766 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 2040852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 10008671 - 10008625
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10008671 ggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10008625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 10909281 - 10909235
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10909281 ggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10909235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 12843168 - 12843314
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||| || |  || ||||| |||||||| ||||| || || ||| ||| |||||||||| |||| |  | || ||||||||||  |||||    
T  12843168 cagcagagtcgtccaaagctttatagtgctcctgctgataagggcaaacagagaatgattgatgagaggcggcctaggaagaaagatgctcctgttgaga 12843267  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  12843268 ttgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgt 12843314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 14039762 - 14039676
Alignment:
Q  123 tgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  14039762 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 14039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 3689011 - 3688962
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  3689011 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggg 3688962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 210
Target Start/End: Complemental strand, 15262665 - 15262549
Alignment:
Q  94 cctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggcc 193  Q
    |||||||| ||||| || |||||| ||||||||||||||||||  |  |||| ||||||||||  |||||| ||||| ||||  ||||| |||||||||     
T  15262665 cctgctgataagggtaaacaaagaatgaatgatgagaggaggcgtagaaggaaagatgctcctgttgagattgtctgctatacttgtggtgagaaaggct 15262566  T
Q  194 acaagagtaatgtttgt 210  Q
    | |||||||||| ||||    
T  15262565 ataagagtaatgcttgt 15262549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 19727825 - 19727686
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||| |||| ||| || || |||||||| |||||||| ||||| || |||||| ||||||||||||||||||| || | || ||||| |  | ||||||    
T  19727825 cagcaaagtcttccaaagccttacagtgctcctgctgataagggcaaacaaagattgaatgatgagaggaggcctaaaaagaaagatgttgttgctgaga 19727726  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaa 203  Q
    | || || ||||  ||||| ||||||||||| ||||||||    
T  19727725 ttgtttgctatacttgtggtgagaaaggccataagagtaa 19727686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 20059116 - 20059159
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  20059116 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 20059159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 5421992 - 5422038
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  5421992 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 5422038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 6597123 - 6597077
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6597123 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 6597077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 6603803 - 6603757
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6603803 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 6603757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 12889777 - 12889731
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12889777 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 12889731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 13255758 - 13255712
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  13255758 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 13255712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 16638841 - 16638795
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16638841 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16638795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 210
Target Start/End: Original strand, 23414859 - 23415001
Alignment:
Q  68 agagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagt 167  Q
    ||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| ||| |||| || | ||  ||||||||| | ||||| ||    
T  23414859 agagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgt 23414958  T
Q  168 ctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |||||  || | |||||||||||||||||||||||||||||||    
T  23414959 ctgtttcaactatggcgagaaaggccacaagagtaatgtttgt 23415001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 43165743 - 43165697
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  43165743 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 43165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 48428515 - 48428469
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  48428515 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 48428469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 10417204 - 10417308
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggatt 268  Q
    ||||| || ||||| | ||| |||||||||||||||| ||| ||  ||||||||||||| || ||||| || |||||||| |||||  |||| |||||||    
T  10417204 tgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggcggatt 10417303  T
Q  269 gcaag 273  Q
    |||||    
T  10417304 gcaag 10417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 15399580 - 15399623
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  15399580 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 15399623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 15713118 - 15713161
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  15713118 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 15713161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 15066052 - 15065990
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| ||| ||| ||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  15066052 gatgctcctgctgcgattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 15065990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 15345307 - 15345353
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||    
T  15345307 aagggacagcagagtcctcctaagccgtacagtgcccccgctgacaa 15345353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 16753763 - 16753809
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  16753763 aagggacagcatagtcgtcctaagccgtacagtgcccccgctgacaa 16753809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 273
Target Start/End: Complemental strand, 11861334 - 11861209
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcaga 247  Q
    ||||||||| | ||||| |||| ||  || ||||| ||||||||||||||||| ||||||||| |  | || | |||||| || ||| |||||||| |||    
T  11861334 gatgctcctgcggagattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtgaagaaatgtttctggtgtggtaaga 11861235  T
Q  248 agggtcacatgttagcggattgcaag 273  Q
    ||||||| |  ||||| |||||||||    
T  11861234 agggtcatactttagctgattgcaag 11861209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 26790475 - 26790512
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccc 95  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  26790475 aagggacagcagagtcgtcctaagccgtacagtgcccc 26790512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 53382081 - 53382118
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccc 95  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  53382081 aagggacagcagagtcgtcctaagccgtacagtgcccc 53382118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 24186258 - 24186222
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgccc 94  Q
    ||||||||||||||||||||||| |||||||||||||    
T  24186258 aagggacagcagagtcgtcctaagccgtacagtgccc 24186222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 273
Target Start/End: Complemental strand, 12501884 - 12501789
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||| ||||||||| |  | || |  ||||| || ||| |||||||  ||||||||||||  ||||| |||||||||    
T  12501884 tgtggcgagaaaggccacaagagcaatgtttgtcctgaggaggtaaagaaatgtttccggtgtggcaagaagggtcacacattagctgattgcaag 12501789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 15359120 - 15359077
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||    
T  15359120 aagggacagcagagtcgccctaagccgtacagtgcccccgctga 15359077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 15586454 - 15586500
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    |||||||| || ||||||||||| |||||||||||||| ||||||||    
T  15586454 aagggacaacaaagtcgtcctaagccgtacagtgcccccgctgacaa 15586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 17497672 - 17497610
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| | ||||| ||||||| ||  ||||| |||||||||||||||||||||| ||||    
T  17497672 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgt 17497610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 23079166 - 23079228
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| ||| ||| || |||| ||| ||||| ||||||||||||||||| |||||||||    
T  23079166 gatgctcctgctgtgattgtttgttttaattgtggtgagaaaggccacaagagcaatgtttgt 23079228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 23079075 - 23079128
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaa 110  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||||||    
T  23079075 taagggccagcagagtcgccctaagccttatagtgcccctgctgataagggaaa 23079128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 16695115 - 16695083
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |||||||||||||||| ||||||||||||||||    
T  16695115 tgtggcgagaaaggccgcaagagtaatgtttgt 16695083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 263750 - 263492
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||     
T  263750 ggacaccaaagttcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcttaagccgtacagtgcccctgctgacaagggtaagcag 263651  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  263650 agactgaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtacca 263551  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  263550 aggatgagaagaagtgcttcaggtgtggtcagaagggtcaccttttagcggattgcaag 263492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 269
Target Start/End: Original strand, 6037 - 6291
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  6037 ggacaccaaagctcattataaagtgatgagtgaacgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcaa 6136  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  6137 agactgaatgatgagaggaggccgaataggagagatgctcctgtcgagatagtttgttttaagtgtggcgagaaaggccacaagagtaacgtttgtacca 6236  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    | ||||||||||||||||||||||||||||||||||||||| || |||| |||||    
T  6237 aggatgagaagaagtgcttcaggtgtggtcagaagggtcacgtgctagctgattg 6291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 14145140 - 14144888
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||     
T  14145140 caaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcagagactt 14145041  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||||| || |    
T  14145040 aatgatgagaggaggccatataggagagatgctcctgctgagatagtttgttttaagtatggcgagaaaggccacaagagtaacgtttgtaccaaggagg 14144941  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  14144940 agaagaagtgcttcaggtgtggtcaaaagggtcacgtgttagctgattgcaag 14144888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 11385200 - 11385426
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||| ||||||||||||| || ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  11385200 aaagctcattacaagatgatgagtgagcggaggggtaagggacaacagagtcatcctaagccgtacagtgcccctgctgacaagggaaagcaacgactga 11385299  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||| ||||| || ||||||||||||||| |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11385300 atgatgagagaaggcccaagaggagagatgctcctgctgagatagtttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatga 11385399  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  11385400 gaagaagtgcttcaggtgtggtcagaa 11385426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 18050717 - 18050975
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| ||  |||| ||||| |||||     
T  18050717 ggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgctccgactgataagggtaagcag 18050816  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||| ||||||||| |||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||    
T  18050817 agacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtacca 18050916  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||||    
T  18050917 aggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaag 18050975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 14283145 - 14283396
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||| ||||   |||||||||||||||||| || || ||||| |||||||||||||| ||||| ||||| ||||| |    
T  14283145 aaagctcattacaaggtgatgagtgagagaaggaataagggacagcagagtcgcccgaagccgtatagtgcccctgctgataagggtaagcagagactca 14283244  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||||||||||||   |||||||||||||||| ||||| | || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14283245 atgatgagaggaggcccgttaggagagatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatga 14283344  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  14283345 gaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattgcaag 14283396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 34 - 272
Target Start/End: Original strand, 12712446 - 12712684
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    |||||||||||||| || || || |||||||| |||||||||||||| ||||||||||| |||||||  |||||||||||| |||||||||||||||| |    
T  12712446 aaggtgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagtgctcctgctggtaagggaaagcaacgactgaatgatgagagaa 12712545  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    | || ||  | |||||  |||||  ||||||||| || | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12712546 gacccaagggaagagacactcctgttgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgctt 12712645  T
Q  234 caggtgtggtcagaagggtcacatgttagcggattgcaa 272  Q
    ||||||||| |||||||||||| ||||||| ||||||||    
T  12712646 caggtgtggacagaagggtcacgtgttagctgattgcaa 12712684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 256
Target Start/End: Original strand, 15099374 - 15099608
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||| |  ||||| ||||| |||||||||||||| ||||| ||  | |    
T  15099374 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgacgccgtatagtgctcctgctgacaagggtaagcagaggttaa 15099473  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||| ||||||||| || |||||||||||||||||||| ||||| || |  |||||||| |||||||||||||||||||| ||||||   | ||||||    
T  15099474 atgatgggaggaggcccaagaggagagatgctcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtgatagagatga 15099573  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||||||||||||||||||||||||||||| ||||    
T  15099574 gaagaagtgcttcaggtgtggtcagaagggacaca 15099608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 16947243 - 16947469
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||    
T  16947243 aaagctcattacaaggtgatgagtgagagaaggggtaagggacagcagagtcgtcctaaaccatacagtgcccctgctgacaagggaaagcagagaatga 16947342  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||| ||||| || ||||||||||||||   ||| || || ||||| |||||||| || ||||||||||||||||||| ||||   | ||||||    
T  16947343 atgatgagagaaggcccaagaggagagatgctccagttgaaattgtttgttacaagtgtggtgaaaaaggccacaagagtaatgcttgtggtagagatga 16947442  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    || ||||||  | ||||||||||||||    
T  16947443 gaggaagtgtgttaggtgtggtcagaa 16947469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 12798275 - 12798519
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| |||||||||||||| ||||| ||| |||    
T  12798275 aaagctctttacaaggtgatgagtgagcgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagagattga 12798374  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||  || ||||||||||||| |||||| || || ||||  ||||||||    ||||||||||||||||||||||||  |  ||||||    
T  12798375 atgatgagaggaggctcaagaggagagatgctcatactgatattgtttgtttcaagtgtgg---aaaaggccacaagagtaatgtttgtgaccgagatga 12798471  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||||||||||||||| || ||||  ||||| |||||    
T  12798472 gaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattg 12798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 19150490 - 19150238
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||| || ||||  |||||||||||||||||||| ||||| ||  ||    
T  19150490 caaagctcattacaaggtgatgagtgagcgcataggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagcagaggttg 19150391  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || |||||||||||||||||||| || || || |  |||||||| |||||||||||||| |||||||| |||     ||||     
T  19150390 aatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgtgtgatcgagatc 19150291  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||| |||||||||||||| || ||||  || || |||||||||    
T  19150290 agaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaag 19150238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 20749889 - 20749637
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| | |||||||||||||||||||||||| || ||||  |||||||||||||||||||| ||||| ||  ||    
T  20749889 caaagctcattacaaggtgatgagtgagcgcataggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagcagaggttg 20749790  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || |||||||||||||||||||| || || || |  |||||||| |||||||||||||| |||||||| |||     ||||     
T  20749789 aatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagtgtggtgagaaaggccacaacagtaatgtgtgtgatcgagatc 20749690  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||| |||||||||||||| || ||||  || || |||||||||    
T  20749689 agaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaag 20749637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 12460106 - 12459872
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||| | || |||||||||||||||||||||||||| || |||| ||| | |||||||||||||||||| | | |||    
T  12460106 aaagctcattacaaggtgatgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctgacaagggaaagcagaaaatga 12460007  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||| |||||||| || |||||||||| |||| ||||||| |||||||| |||||||| || |||||||||||||| |||| ||||   | ||||||    
T  12460006 atgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatga 12459907  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    || ||| || || ||||||||||||||||| ||||    
T  12459906 gaggaaatgttttaggtgtggtcagaagggacaca 12459872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 26091563 - 26091820
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  26091563 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 26091662  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  26091663 aga-tgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 26091761  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  26091762 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 26091820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 26115355 - 26115612
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||| | |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  26115355 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggataacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 26115454  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||| |||||| |||||||| || ||||||||||||||  ||||||| || ||||| |||||||| |||||||||||||||||||||||||||   |    
T  26115455 aga-tgagtgatgataggaggcccaagaggagagatgctccggctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 26115553  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  26115554 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 26115612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 40924582 - 40924839
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||||||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  40924582 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 40924681  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  40924682 aga-tgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 40924780  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  40924781 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 40924839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 52 - 269
Target Start/End: Complemental strand, 13676899 - 13676682
Alignment:
Q  52 agaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatg 151  Q
    ||||||||  |||||||||||| |||||||||||| ||||| ||||||||||| ||||| || ||  ||||||||||||||||||| || ||||||||||    
T  13676899 agaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatg 13676800  T
Q  152 ctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaggg 251  Q
    |||||  |||||| || || || ||||||||  ||||||||||||||||||||||||||   |||||||||||||||| |||||||||||| ||||||||    
T  13676799 ctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtacttcaggtgtggacagaaggg 13676700  T
Q  252 tcacatgttagcggattg 269  Q
     ||||  ||||| |||||    
T  13676699 acacacattagctgattg 13676682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 49155785 - 49155547
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||||||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  49155785 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 49155686  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    |  ||  ||| || |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |     
T  49155685 ggatgggtgaggataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 49155586  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  49155585 agatgataggaagtgcttcaggtgtggtcagaagggtca 49155547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 21755896 - 21755656
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    ||||||||||||| ||| ||| | ||||||||| | || ||||||||||| || | ||||||||| || |||||||| ||||||||||| |||||||| |    
T  21755896 gacatcaaagctcattacaagataatgagtgagaggaggggtaagggacaacaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 21755797  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
       ||| |||||| | |||||| || ||||||||||||||  ||||||| || ||||| |||||||| || |||||||||||||| |||||||||   ||    
T  21755796 atatgagtgatgacatgaggcctaagaggagagatgctccctctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaa 21755697  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  21755696 agatgagaggaagtgtttcaggtgtggtcagaagggtcaca 21755656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 14261017 - 14261268
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||| |||||||| | ||||||||||||| |||||||||| || ||||| |||||||||||||||||||| ||| | |||||||    
T  14261017 aaagctcattacaaggtgatcagtgagcgcaaaggtaagggacagtagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagtagagactga 14261116  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| ||  ||||| ||||||||||||||||  | || |  |||||||| |||||||||||||||||||||||  ||     ||||||    
T  14261117 atgatgagaggaggcctaaggggagatatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgcgtcatcgagatga 14261216  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||| ||| |||||| ||||||| || ||||  || || |||||||||    
T  14261217 gaagaagtactttaggtgtagtcagaaaggacacacattggctgattgcaag 14261268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 13024828 - 13024647
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||||||||||||||| | || |||||||||||| ||| |||||||||||| |||||||| ||||||||||| || ||||| |    
T  13024828 gacaccaaagctcattacaaggtgatgagtgagaggaggggtaagggacagtagaatcgtcctaaaccttacagtgctcctgctgacaaagggaagcaga 13024729  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaa 197  Q
    |  |||||||||| |||||||| || ||||||||||||||| |||| || || ||||| |||||||| || |||||||||||    
T  13024728 ggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttacaagtgtggtgaaaaaggccacaa 13024647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 40 - 256
Target Start/End: Original strand, 13965457 - 13965673
Alignment:
Q  40 atgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactgaatgatgagaggaggccg 138  Q
    ||||||||| | || ||||||||||| || | ||||||||| || |||||||| ||||||||||| |||||||| |||| ||  |||||| ||||||||     
T  13965457 atgagtgagaggaggggtaagggacaacataatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaaga-tgggtgatgataggaggccc 13965555  T
Q  139 aataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggt 238  Q
    || ||||||||||||||| ||||||| |  || || |||||||| ||||||| |||||||||||||||||||   |||||||| |  || ||||||||||    
T  13965556 aagaggagagatgctcctgctgagattgattgctacaagtgtggtgagaaagaccacaagagtaatgtttgtggtaaagatgatagaaaatgcttcaggt 13965655  T
Q  239 gtggtcagaagggtcaca 256  Q
    ||||||||||||||||||    
T  13965656 gtggtcagaagggtcaca 13965673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 13004940 - 13004783
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| |||||||||||||| || || || |||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||    
T  13004940 gctcattacaaggtgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagcgcccctgctggcaagggaaagcaacgactgaatg 13004841  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtgg 182  Q
    ||||||| || || ||  | |||||  ||||| |||||||||| || | |||||||||    
T  13004840 atgagagaagacccaagggaagagacactcctgctgagatagtttgctttaagtgtgg 13004783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 211
Target Start/End: Original strand, 12203620 - 12203760
Alignment:
Q  71 gtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctg 170  Q
    |||||||||| || |||||||| ||||||||||| || || |||||| |||||||||||||||| || || |||||||||| |||| ||| ||| || ||    
T  12203620 gtcgtcctaagccctacagtgctcctgctgacaaagggaaacaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgtgattgtttg 12203719  T
Q  171 ttataagtgtggcgagaaaggccacaagagtaatgtttgta 211  Q
     || |||||||| ||||| ||||||||||||||||||||||    
T  12203720 ctacaagtgtggtgagaagggccacaagagtaatgtttgta 12203760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 9591805 - 9591653
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| ||||| || || |||||||||| ||| ||||| ||||| ||| ||  |||||| ||| |||| || | ||  |||||||||     
T  9591805 aagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctg 9591706  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| |||||||  || ||||||||||||||||||||||| |||||||||    
T  9591705 cagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgt 9591653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 12690939 - 12690896
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  12690939 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 12690896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 15157889 - 15157932
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  15157889 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 15157932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 8711043 - 8710997
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8711043 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 8710997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 10873897 - 10873853
Alignment:
Q  60 gggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  10873897 gggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 10873853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 16726270 - 16726422
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| |||||||| || ||||||||| |||| ||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||||     
T  16726270 aagggccagcagagtcgccctaaaccttaaagtgcccctactgataagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 16726369  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || || ||||  || ||||||| |||||||||||||||||||||||||    
T  16726370 cggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 16726422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 17703284 - 17703436
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| |||||||| || ||||||||| |||| ||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||||     
T  17703284 aagggccagcagagtcgccctaaaccttatagtgcccctactgataagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 17703383  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || || ||||  || ||||||| |||||||||||||||||||||||||    
T  17703384 cggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 17703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 44788183 - 44788235
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaa 110  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| || |||||    
T  44788183 aagggacagcagagtcgtcctaagccgtacagtgcccctactgataaaggaaa 44788235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 11234045 - 11234088
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  11234045 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 11234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 11549934 - 11549977
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  11549934 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 11549977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 14335834 - 14335788
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  14335834 aagggacagcagagtcgtcctaagccgtacaatgcccccgctgacaa 14335788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 18587003 - 18587049
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  18587003 aagggacagcagagtcgtcctaagccgtacaatgcccccgctgacaa 18587049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 13689479 - 13689436
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||    
T  13689479 aagggacaccagagtcgtcctaagccgtacagtgcccctactga 13689436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 14957946 - 14957903
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||| || |||||||||| ||||||||||||||||||||    
T  14957946 aagggacagtagggtcgtcctaagccgtacagtgcccctgctga 14957903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 18181184 - 18181138
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||| ||||||| |||||| |||||||||||||| |||||    
T  18181184 ggtaagggacaacagagtcttcctaagccgtacagtgcccccgctga 18181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 9567 - 9825
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||      
T  9567 ggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgataagggtaagctg 9666  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| |||||||||||||||||   |||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  9667 agacttaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagtgtggcgagaaaggccacaagagtaatgtttgtacca 9766  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  9767 aggatgagaagaagtgcttcaggtgtggttagaagggtcaccttttagcggattgcaag 9825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 179; Significance: 1e-96; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 64389 - 64615
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  64389 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactga 64488  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  64489 atgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaggatga 64588  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||| || |||||||||||||||||    
T  64589 gaagaaatgtttcaggtgtggtcagaa 64615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 48967 - 49193
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  48967 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactga 49066  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||    
T  49067 atgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggatga 49166  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||| || |||||||||||||||||    
T  49167 gaagaaatgtttcaggtgtggtcagaa 49193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 58001 - 58227
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  58001 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactga 58100  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||    
T  58101 atgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtggcgagaagggccacaagagtaatgtttgtaccaaggatga 58200  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||| || |||||||||||||||||    
T  58201 gaagaaatgtttcaggtgtggtcagaa 58227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 30141 - 29907
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| |||||||||||||| ||||| ||  | |    
T  30141 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagagtttaa 30042  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||| ||||||||| ||||| || |  |||||||| |||||||||||||||||||| ||||||   | ||||||    
T  30041 atgatgagaggaggcccaagaggagagatgttcctactgacatagtttgcttcaagtgtggtgagaaaggccacaagagtaacgtttgtgatagagatga 29942  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||||||||||||||||||||||| ||||| ||||    
T  29941 gaagaagtgcttcaggtgtggtcaaaagggacaca 29907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 19716341 - 19716592
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||| ||| |||    
T  19716341 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttgacaagggaaagcagagattga 19716440  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  19716441 atgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatga 19716540  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||| ||||||||||||||||| || ||||   |||| |||||||||    
T  19716541 gaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaag 19716592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 19720904 - 19721155
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||| ||| |||    
T  19720904 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttgacaagggaaagcagagattga 19721003  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  19721004 atgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatga 19721103  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||| ||||||||||||||||| || ||||   |||| |||||||||    
T  19721104 gaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaag 19721155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 12577479 - 12577221
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||| |||||     
T  12577479 ggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccggctgacaagggtaagcag 12577380  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||| ||||||||| |||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||    
T  12577379 agacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtacca 12577280  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||||    
T  12577279 aggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaag 12577221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 23097342 - 23097568
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| |||||||| | ||| |||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  23097342 aaagctcattacaaggtgatgagtgagcggagaggtaaagcacatcagagtctccctaagccgtacagtgcccctgctgacaagggaaagcaacgactga 23097441  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||||||||||||||| |||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||||| |    
T  23097442 atgatgagaggaggcccaagaggagagatgctcctgctgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatca 23097541  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||| ||||||||||||    
T  23097542 gaagaagtgcttcaagtgtggtcagaa 23097568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 269
Target Start/End: Complemental strand, 23274709 - 23274465
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| |||||||||||||| || || || |||||||| ||||||||||| || | ||| ||||| |||||||||||||| ||||| ||  | ||||    
T  23274709 gctcattacaaggtgatgagtgaacgtaggggcaagggacaacagagtcgtccgaagcagtatagtgctcctgctgacaagggtaagcagaggttaaatg 23274610  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| || |||||||||||||||||||| || || ||  | |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  23274609 atgagaggaggcccaagaggagagatgctcctactgaaattgtttgcaacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatgagaa 23274510  T
Q  225 gaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    |||||||||||||||||| |||||||| ||||  ||||| |||||    
T  23274509 gaagtgcttcaggtgtggacagaagggacacacattagctgattg 23274465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 20848711 - 20848457
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||||||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  20848711 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 20848612  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| ||||  |  || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  20848611 aga-tgggtgatgataggatcc--aagaggagagatgctcctgttgagattgt-tgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 20848516  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  20848515 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 20848457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 28350958 - 28350807
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| |||||  ||||||| || || || ||||| |||| |||||| ||  |||||||| |||||||||||||||| || || |||||||||| ||||     
T  28350958 aagggtcagcaaggtcgtccgaagccctatagtgctcctgttgacaaaggggagcaaagattgaatgatgagaggagacctaagaggagagatgttcctg 28350859  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    ||||||| || || || |||||||| ||||||||||||||||||||||||||    
T  28350858 ctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 28350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 21901593 - 21901469
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcg 184  Q
    |||||||| ||||||||||| || || || ||| |||||||||||||||| || || || ||||||| |||||||||||| || || || |||||||| |    
T  21901593 tacagtgctcctgctgacaaagggaaacagagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtg 21901494  T
Q  185 agaaaggccacaagagtaatgtttg 209  Q
    |||| ||||||||||||||||||||    
T  21901493 agaagggccacaagagtaatgtttg 21901469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 24817230 - 24817354
Alignment:
Q  88 agtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgaga 187  Q
    ||||| |||||||| ||||| || |||||| ||||||||||||||||||| |  | || |||| || |||||||||| || || ||||  ||||| ||||    
T  24817230 agtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcctagaaagaaagatactactactgagattgtttgctatacttgtggtgaga 24817329  T
Q  188 aaggccacaagagtaatgtttgtac 212  Q
    | |||||||||||||||| ||||||    
T  24817330 agggccacaagagtaatgcttgtac 24817354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 65 - 210
Target Start/End: Original strand, 23116426 - 23116571
Alignment:
Q  65 agcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagat 164  Q
    |||||||||| ||||| || || |||||||||||||| ||||| ||||| ||| ||   ||||| ||| |||| || | ||  ||||||||| | |||||    
T  23116426 agcagagtcgccctaagccttatagtgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctccttcagagat 23116525  T
Q  165 agtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     || ||||  || ||||||| |||||||||||||||||||||||||    
T  23116526 tgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 23116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 44382933 - 44382982
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  44382933 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggg 44382982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 17002080 - 17002028
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaa 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || |||||    
T  17002080 aagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaaggaaa 17002028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 24265450 - 24265407
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  24265450 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 24265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 9338662 - 9338616
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  9338662 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 9338616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 9487296 - 9487250
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  9487296 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 9487250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 10871933 - 10871887
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  10871933 ggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctga 10871887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 16984320 - 16984274
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16984320 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16984274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 22322705 - 22322751
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22322705 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 22322751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 24713114 - 24713068
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24713114 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 24713068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 24657138 - 24657232
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaa 272  Q
    ||||| ||||||||||||||||||| ||||||| |  | || | ||||||||| ||| |||||||  ||||||||||||  ||||| ||||||||    
T  24657138 tgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtggcaagaagggtcacacattagctgattgcaa 24657232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 27374349 - 27374303
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  27374349 aagggactgcagagtcgtcctaagccgtacagtgcccccgctgacaa 27374303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 16931635 - 16931598
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccc 95  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16931635 aagggacagcagagtcgtcctaagccgtacagtgcccc 16931598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 23205306 - 23205245
Alignment:
Q  149 atgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |||||||| | ||||| || ||||  || |||||||||||||||||||||||||||||||||    
T  23205306 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 23676910 - 23676849
Alignment:
Q  149 atgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |||||||| | ||||| || ||||  || |||||||||||||||||||||||||||||||||    
T  23676910 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23676849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 21320463 - 21320515
Alignment:
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||| |||| ||||    
T  21320463 ctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgt 21320515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 24874113 - 24874156
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||    
T  24874113 aagggacggcagagtcgttctaagccgtacagtgcccctgctga 24874156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 11351161 - 11351223
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| | ||||| |||||||  || ||||| ||||||||||||||||| |||||||||    
T  11351161 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 11351223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 22462931 - 22462993
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| | ||||| || ||||  || ||||| |||||||||||||||||||||||||||    
T  22462931 gatgctcctgcggagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgtttgt 22462993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 7e-92; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 17266293 - 17266551
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||||||||| |||||     
T  17266293 ggacaccaaagctcattataaggtgatgagtgagcgaagaggtaaagggcatcagagtcgtcctaaaccgtatagtgcccctgctgacaagggtaagcag 17266392  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||| ||||||||| |||||||||| |||| |||||||||||||||||| ||||||||||| |||||||||     
T  17266393 agacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgttttaagtgtggcgagaaaggtcacaagagtaacgtttgtaccg 17266492  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  17266493 aggatgagaagaagtgcttcaggtgtggacagaagggtcacatgctagccgattgcaag 17266551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 22506087 - 22505856
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||||||| | ||||||||| | || |||||||||||||||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  22506087 gacaccaaagctcattataagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 22505988  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| |||||||| || ||||||||||||||| ||||||| || ||||| |||||||| ||||||||||||||||| |||||||||   |    
T  22505987 aga-tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggta 22505889  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcaga 247  Q
    |||| |||| |||||||||||||||||||||||    
T  22505888 aagacgagaggaagtgcttcaggtgtggtcaga 22505856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 21870243 - 21870432
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||||||||||||||||| ||||| | | ||    
T  21870243 caaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagaaattg 21870342  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||| ||||||||| || |||||||||||||||||||||||| | || |  |||||||| ||||||| |||||||||||||||||||    
T  21870343 aatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgtttgt 21870432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 21874523 - 21874712
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||||||||||||||||| ||||| | | ||    
T  21874523 caaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagaaattg 21874622  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||| ||||||||| || |||||||||||||||||||||||| | || |  |||||||| ||||||| |||||||||||||||||||    
T  21874623 aatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaagaccacaagagtaatgtttgt 21874712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 20345690 - 20345450
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||| ||| ||||||||| || || ||||| ||||||||||| |||||||| |    
T  20345690 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagtagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagcaga 20345591  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || ||||||||||||||| ||||||| || ||||| |||||||| ||||||| |||||||||||||||||||   |    
T  20345590 aga-tgggtgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaagcccacaagagtaatgtttgtggta 20345492  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  20345491 aagatgataggaagtgcttcaggtgtggtcagaagggtcaca 20345450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 25851480 - 25851240
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  25851480 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 25851381  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || ||||||||||||| |  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  25851380 aga-tgggtgatgataggaggcccaagaggagagatgctcttgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggta 25851282  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  25851281 aagatgataggaagtgcttcaggtgtggtcagaagggtcaca 25851240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 14883951 - 14884191
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||||||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||| ||||||| |||||||| |    
T  14883951 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcaga 14884050  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    |  ||  |||||| |||||||| || ||||||||||||||  ||||||| || ||||| |||||||| ||||||||||||||||||||||| |||   |     
T  14884051 ggatgggtgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtctgtgggag 14884150  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  14884151 agatgataggaagtgcttcaggtgtggtcagaagggtcaca 14884191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 23077865 - 23078097
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||||| ||||||||| | || ||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||| |    
T  23077865 gacaccaaagctcattacaaggtaatgagtgagaggaggggtaagggacagcagagtcgtcctaaaccttacagtgctcctgctgacaaagggaagcaga 23077964  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| |||||||| || ||||||||||||||| ||||||| || ||||  |||||||| || ||||||||||| || |||| ||||   |    
T  23077965 aga-tgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtatgtttcaagtgtggtgaaaaaggccacaaaagcaatgcttgtggta 23078063  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaa 248  Q
     |||||||| ||| || |||||||||||||||||    
T  23078064 gagatgagaggaaatgtttcaggtgtggtcagaa 23078097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 23563134 - 23563360
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||| |||||||||| || ||||||||||||||| ||||| |||| || ||||| ||||| |||||||| ||||  ||||| ||  | |    
T  23563134 aaagctcattacaagatgatgagtgaacgtagaggtaagggacagaagagttgtccgaagccgtatagtgctcctgctgaaaaggataagcagaggttaa 23563233  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    || ||||||||||||| || |||||||||||||||||||| || || || |  |||||||| || |||||||||||||||||||| |||   | ||||||    
T  23563234 ataatgagaggaggcccaagaggagagatgctcctactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatga 23563333  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  23563334 gaagaagtgcttcaggtgtggtcagaa 23563360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 209
Target Start/End: Complemental strand, 23669971 - 23669847
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcg 184  Q
    |||||||| |||| |||||| ||| |||||||| |||||||||||||||| || || ||||||||||||||| ||||||| || |  ||  ||||||| |    
T  23669971 tacagtgctcctgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgctcctgctgagattgtttcctaccagtgtggtg 23669872  T
Q  185 agaaaggccacaagagtaatgtttg 209  Q
    |||||||||||||||||||||||||    
T  23669871 agaaaggccacaagagtaatgtttg 23669847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 21983143 - 21983328
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||| | ||||||||||| ||    || || |||||  ||||||| || || |||||||  ||||||||||| || ||||||||| |||    
T  21983143 aaagctcattataagtttatgagtgagcggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgttcctgctgacaaagggaagcaaagattga 21983242  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtt 207  Q
    ||||||||||||| || || || ||||||| |||| ||||||| || || |||| |||||| ||||| ||||||||||||||||||    
T  21983243 atgatgagaggagacctaagagaagagatgttcctgctgagattgtttgctataggtgtggtgagaagggccacaagagtaatgtt 21983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 21560991 - 21561176
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||| ||||||||||| ||||||||| | ||    || || |||||  ||||||| || || ||||||||  |||||||||| || || |||||| |||    
T  21560991 aaagcccgttataaggttatgagtgagaggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgctactgctgacaaagggaaacaaagattga 21561090  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtt 207  Q
    ||||||||||||| || || || ||||||| |||| ||||||| || || |  ||||||||  |||| ||||||||||||||||||    
T  21561091 atgatgagaggagacctaagagaagagatgttcctgctgagattgtttgcttcaagtgtggtaagaagggccacaagagtaatgtt 21561176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 27521790 - 27521741
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27521790 ggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaa 27521741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 43122806 - 43122685
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcg 184  Q
    |||||||| | || |||||| ||| |||||||| |||||||||||||||| || || |||||||||| || | | ||||| || || || ||||||||||    
T  43122806 tacagtgctcatgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgttcatgcagagattgtttgctacaagtgtggcg 43122707  T
Q  185 agaaaggccacaagagtaatgt 206  Q
    |||  |||||||||||||||||    
T  43122706 agaggggccacaagagtaatgt 43122685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 16258103 - 16258189
Alignment:
Q  123 tgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  16258103 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 16258189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 22591822 - 22591908
Alignment:
Q  123 tgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  22591822 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22591908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 22595377 - 22595463
Alignment:
Q  123 tgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  22595377 tgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 22595463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 21331997 - 21332125
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||| || || |||||||| |||||||| |||||||| |||||| | ||||||||||| ||||| |  | || |||||||| |  |||||    
T  21331997 cagcagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagagaaggcctagaaagaaagatgctcatgttgaga 21332096  T
Q  164 tagtctgttataagtgtggcgagaaaggc 192  Q
    | || || ||||  |||||||||||||||    
T  21332097 ttgtgtgctatacttgtggcgagaaaggc 21332125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 14996744 - 14996787
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  14996744 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 14996787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 22138049 - 22138006
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  22138049 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 22138006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 22329892 - 22329935
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  22329892 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 22329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 23474578 - 23474499
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggcc 137  Q
    ||||| ||||| |||||||| || || |||| ||| |||||||| ||||| ||||||||| |||||||||||||||||||    
T  23474578 aagggtcagcaaagtcgtccaaagccttacattgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcc 23474499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 27682405 - 27682448
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  27682405 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 27682448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 16359883 - 16359837
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16359883 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16359837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 26735736 - 26735882
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||| || || |||||||| ||| |||| || ||||| |||||| | ||||||||||||||||| |  | || ||||||||||  |||||    
T  26735736 cagcagagtcgtccaaagccttacagtgctcctactgataaaggaaaacaaagagttaatgatgagaggaggcctagaaagaaagatgctcctgttgaga 26735835  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || || |  ||| | ||||||||||| |||||||||| ||||    
T  26735836 ttgtttgctacacttgttgtgagaaaggccataagagtaatgcttgt 26735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 27665508 - 27665554
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  27665508 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 27665554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 34569875 - 34569829
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34569875 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 34569829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 40712161 - 40712115
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  40712161 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 40712115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 20779168 - 20779083
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    ||||| || ||||| | ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || ||||||||||||||    
T  20779168 tgttacaaatgtggtgtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaagggtca 20779083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 21883160 - 21883007
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   || || ||  ||||||  | || ||||| | ||    
T  21883160 taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgaggatagacggccgaggaagaaagatgtttct 21883061  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     ||||||| ||||||| ||| ||||||||||||||||||||||| |||| ||||    
T  21883060 gctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgt 21883007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 18782498 - 18782346
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| || |||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| ||| || | || | ||  |||||||||     
T  18782498 aagggccaacagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggtggtctaagaagaaggatgctcctg 18782399  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| || ||||  || |||||||||||||||||||||||||||||||||    
T  18782398 cggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 18782346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 273
Target Start/End: Complemental strand, 22465205 - 22465101
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggatt 268  Q
    ||||| || ||||| | ||| |||||||||||||||| ||| | | ||||||||||||| || ||||| || |||||||||||||| ||||| || || |    
T  22465205 tgttacaaatgtggtgtgaagggccacaagagtaatgcttgcatccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaat 22465106  T
Q  269 gcaag 273  Q
    |||||    
T  22465105 gcaag 22465101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 19773341 - 19773298
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  19773341 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 19773298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 27613737 - 27613694
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  27613737 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 27613694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 41774223 - 41774180
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  41774223 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 41774180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 23526345 - 23526283
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| ||||||| ||||||| ||| ||||| ||||||||||||||||| |||| ||||    
T  23526345 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgt 23526283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 23461356 - 23461203
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||||||  | ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  23461356 taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggaaaatagagaatggtcgatgataggcggcctaagaagaaggatgctcct 23461257  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     | || || |||| ||  || ||||| ||||||||||||||||| |||||||||    
T  23461256 gcggaaattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgt 23461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 22351300 - 22351257
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  22351300 aaggggcagcagagtcgtcataagccgtacagtgcccctgctga 22351257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 29473078 - 29473121
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||    
T  29473078 aagggacagcagagtcgtcctaagccgtacagtgtccccgctga 29473121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 37288501 - 37288544
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||| || |||||    
T  37288501 aagggacagcagagtcgtcctaagccgtacagtgctcccgctga 37288544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 20824708 - 20824623
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    ||||| || ||||| | ||| |||||||||||||||| ||| ||  ||||||||||||| || ||||| || |||||||| |||||    
T  20824708 tgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtca 20824623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 28892055 - 28892140
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    ||||| || ||||| | ||| |||||||||||||||| ||| ||  ||||||||||||| || ||||| || |||||||| |||||    
T  28892055 tgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtca 28892140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 169; Significance: 1e-90; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 25 - 273
Target Start/End: Original strand, 11696 - 11944
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||| ||||| ||||    
T  11696 gctcattataaggtgatgagtgagagaagaggtaagggacagcagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaagcagagacttaatg 11795  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| || ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11796 atgagaggaggcccaagaggagagatgctcctactgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaa 11895  T
Q  225 gaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||||||||||||||||| || ||||   |||| |||||||||    
T  11896 gaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaag 11944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 1739 - 1986
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||| ||||||||||| ||||| || || ||||    
T  1739 aaagctcattacaaggtgatgagtgagcgcagaggtaagggacagcagagtcatcctaaaccatatagtgctcctgctgacaaaggaaaacagaggctga 1838  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||| |||||||||| |||| || || || || |||||||| |||||||||||||||||||||||||||   ||||||||    
T  1839 atgatgagaggaggcccaagaggatagatgctcctgctgaaattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagatga 1938  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||||||||||||||| || ||||  ||||| |||||    
T  1939 gaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattg 1986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 70817 - 70657
Alignment:
Q  94 cctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggcc 193  Q
    ||||||||||| ||||| |||||| |||||||||||||| |||| |   ||||||||||||||  |||  | || ||||| |||||||| | ||||||||    
T  70817 cctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggcc 70718  T
Q  194 acaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    ||||| ||||||| || |||||||||||||||||||| ||||| || ||||| || |||||    
T  70717 acaagggtaatgtctgcaccaaagatgagaagaagtgtttcagatgcggtcataaaggtca 70657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 332 - 558
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||| | ||||    
T  332 aaagctcattacaaggtgatgagtgagcggaggggtaagggacaacagagtcgtcctaagccgtacagtccccctgctgacaagggaaagcaacggctga 431  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||| || || || |||||||||||||||||||||||||| || | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  432 atgatgagagaagacccaagaggagagatgctcctactgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatga 531  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  532 gaagaagtgcttcaggtgtggtcagaa 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 1635 - 1861
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| || ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  1635 aaagctcattacaaggtgatgagtgagcggaggggtaagggaaaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactga 1734  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||| ||||| || |||||||||||| || |||| ||| | || |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1735 atgatgagagaaggcccaagaggagagatgctactgctgaaataatttgctataagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatga 1834  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  1835 gaagaagtgcttcaggtgtggtcagaa 1861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 21566920 - 21567146
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  21566920 aaagctcattacaaggtgatgagtgagcggaggagtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactga 21567019  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||| ||||| || ||||||||||||||| |||| ||||| || | |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  21567020 atgatgagagaaggcccaagaggagagatgctcctgctgaaatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtactaaagatga 21567119  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  21567120 gaagaagtgcttcaggtgtggtcagaa 21567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 24515343 - 24515569
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| ||||||||||||||||| || || ||||    
T  24515343 aaagctcattacaaggtgatgagtgaccgcagaggcaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggaaaacagaggctga 24515442  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||  ||| || || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  24515443 atgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgttataagtgtggtgagaaaggccacaagagtaatgtttgtactaaagatga 24515542  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    ||||||||| |||||||||||||||||    
T  24515543 gaagaagtgtttcaggtgtggtcagaa 24515569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 23 - 273
Target Start/End: Complemental strand, 18798041 - 18797791
Alignment:
Q  23 aagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaa 122  Q
    |||||| ||| |||||||||||||| || ||||| |||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||| ||||    
T  18798041 aagctcattacaaggtgatgagtgaccgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcaaagattgaa 18797942  T
Q  123 tgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgag 222  Q
    ||||||||||||||| || ||||| |||||||||   || || || ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  18797941 tgatgagaggaggcccaagaggagggatgctcctgtggatattgtttgttataagtgtggcgagaaaggccacaagagtaatgtttgcactaaagatgag 18797842  T
Q  223 aagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||| || |||||||||||||||||||| ||||   |||| |||||||||    
T  18797841 cagaaatgtttcaggtgtggtcagaagggacacactctagctgattgcaag 18797791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 14376845 - 14377071
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| |||||  | |||||||||||||||||||| || ||||| ||||| ||||||||||||||||| || ||  |||    
T  14376845 aaagctcattacaaggtgatgagtgatcgaaggagcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggaaaacagaggttga 14376944  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||||||||| || ||||||||||||||||||  |||  | || || || ||||| || ||||||||||||||||||||||||||||| ||||||||    
T  14376945 atgatgagaggagacccaataggagagatgctcctgttgatgttgtttgctacaagtgcggtgagaaaggccacaagagtaatgtttgtactaaagatga 14377044  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  14377045 gaagaagtgcttcaggtgtggtcagaa 14377071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 25 - 269
Target Start/End: Original strand, 34642517 - 34642762
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| |||||||||||||| || || || |||||||| |||||||||||||| ||||| ||||| |||||||  |||||||||||| |||||||||    
T  34642517 gctcattacaaggtgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtatagtgctcctgctggtaagggaaagcaacgactgaatg 34642616  T
Q  125 atgagaggaggccgaatagga-gagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgaga 223  Q
    |||| ||||| ||  |  ||| ||||  ||||| | |||||||| || | ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  34642617 atgaaaggagaccccaagggaagagacactcctgcggagatagtttgctttaagtgtggcgagaagggccacaaaagtaatgtttgtaccaaagatgaga 34642716  T
Q  224 agaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  34642717 agaagtgcttcaggtgtggacagaagggtcacgtgttagctgattg 34642762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 52 - 273
Target Start/End: Complemental strand, 19438324 - 19438103
Alignment:
Q  52 agaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatg 151  Q
    |||||||||||||||||||||||||| || || || ||||| |||||||||||||| ||||| ||  | ||||||||||||||||| || ||||||||||    
T  19438324 agaggtaagggacagcagagtcgtccgaagccatatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatg 19438225  T
Q  152 ctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaggg 251  Q
    ||||| ||||||| ||  |||| |||||||| ||||||||||||  ||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||    
T  19438224 ctcctgctgagatcgttcgttacaagtgtggtgagaaaggccacttgagtaatgtttgtactaaagatgagaataagtgtttcaggtgtggtcagaaagg 19438125  T
Q  252 tcacatgttagcggattgcaag 273  Q
     ||||   |||| |||||||||    
T  19438124 acacactctagctgattgcaag 19438103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 41 - 248
Target Start/End: Complemental strand, 19456356 - 19456149
Alignment:
Q  41 tgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaa 140  Q
    ||||||| || |||||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| ||    
T  19456356 tgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaa 19456257  T
Q  141 taggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgt 240  Q
     ||||||||| ||||||||||||| || || |  |||||||| || |||||||||||||||||||| |||   | ||||||||||||||||||||||||     
T  19456256 gaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgg 19456157  T
Q  241 ggtcagaa 248  Q
     |||||||    
T  19456156 tgtcagaa 19456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 41 - 248
Target Start/End: Complemental strand, 19466501 - 19466294
Alignment:
Q  41 tgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaa 140  Q
    ||||||| || |||||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| ||    
T  19466501 tgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaa 19466402  T
Q  141 taggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgt 240  Q
     ||||||||| ||||||||||||| || || |  |||||||| || |||||||||||||||||||| |||   | ||||||||||||||||||||||||     
T  19466401 gaggagagatactcctactgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgg 19466302  T
Q  241 ggtcagaa 248  Q
     |||||||    
T  19466301 tgtcagaa 19466294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 256
Target Start/End: Original strand, 10465777 - 10466011
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||| | || |||||||||||||||||||||||||| || |||| ||| | |||||||||||||||||| | | |||    
T  10465777 aaagctcattacaaggtgatgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctgacaagggaaagcagaaaatga 10465876  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||| |||||||| || |||||||||| |||| ||||||| |||||||| |||||||| || |||||||||||||| |||| ||||   | ||||||    
T  10465877 atgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatga 10465976  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    || ||| || || ||||||||||||||||| ||||    
T  10465977 gaggaaatgttttaggtgtggtcagaagggacaca 10466011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 24367758 - 24367501
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  24367758 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 24367659  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || ||||||||||||| |  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  24367658 aga-tgggtgatgataggaggcccaagaggagagatgctcatgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 24367560  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  24367559 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 24367501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 25771196 - 25771014
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||  |||||||||||||| |||||||||||||| |||||||||||  ||||||| ||||| ||||||||||| || || || || ||||    
T  25771196 aaagctcattatagagtgatgagtgagcgcagaggtaagggacaacagagtcgtccgtaaccgtatagtgctcctgctgacaaaggtaaacagaggctga 25771097  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaat 204  Q
    |||||||||||||||| || ||||||||||||||||||||||| |||||||  |||||||| || ||||||||||||| ||||    
T  25771096 atgatgagaggaggcctaagaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaagaataat 25771014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 21474908 - 21474768
Alignment:
Q  66 gcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagata 165  Q
    |||||||||||| || ||||| ||||| |||||||||||||| ||||| |  |||||||||||||||||||| |  |||||||||||||||||||||||     
T  21474908 gcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagatgctgaatgatgagaggaggcctaggaggagagatgctcctactgagatt 21474809  T
Q  166 gtctgttataagtgtggcgagaaaggccacaagagtaatgt 206  Q
    || ||||  |||||||| || ||||||||||||||||||||    
T  21474808 gtttgtttcaagtgtggtgaaaaaggccacaagagtaatgt 21474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 19486286 - 19486435
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcg 184  Q
    |||||||| ||||||||||| || ||||||||| |||||||||||||||| || || || ||||||| |||||||||||| || || || |||||||| |    
T  19486286 tacagtgctcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtg 19486385  T
Q  185 agaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttc 234  Q
    |||| |||||||||||||||||||| |     ||||||||||||||||||    
T  19486386 agaagggccacaagagtaatgtttgcaatggtgatgagaagaagtgcttc 19486435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 23081733 - 23081587
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||| || || ||||||||  ||||||| || |||||||||||| | |||||||||||| |||| |  | || ||||||||||  |||||    
T  23081733 cagcagagtcgtccaaagccttacagtgctgctgctgataaaggaaagcaaagagttaatgatgagaggcggcctaggaagaaagatgctcctgttgaga 23081634  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || |||||||  ||||| |||||||||||||||||||||| ||||    
T  23081633 ttgtttgttatacttgtggtgagaaaggccacaagagtaatgcttgt 23081587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 19881745 - 19881588
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| |||||||||||||| || || || |||| ||| || ||||||||||| |||||||| ||||||||||  |||||||||||| |||||||||    
T  19881745 gctcattacaaggtgatgagtgaacggaggggcaaggaacaacaaagtcgtcctaagccgtacagcgcccctgctggtaagggaaagcaacgactgaatg 19881646  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtgg 182  Q
    ||||||| || || ||  | |||||  ||||| |||||||||| || | |||||||||    
T  19881645 atgagagaagacccaagggaagagacactcctgctgagatagtttgctttaagtgtgg 19881588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 8720731 - 8720821
Alignment:
Q  119 tgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    ||||||||||||||||||| || |||||||||| ||||  |||||| || || || |||||||| ||||||||||||||||||||||||||    
T  8720731 tgaatgatgagaggaggcctaagaggagagatgatcctgatgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 8720821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 16813895 - 16813805
Alignment:
Q  119 tgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||||||| || || |||||||||| |||| ||||||| || || || |||||||| ||||||||||||||||||||||||||    
T  16813895 tgaatgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttg 16813805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 30677952 - 30678141
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||  ||| ||||| ||||||||||| || |||||| | ||||||| |||||| || || ||||  || |||||||| ||  | ||||||||  ||    
T  30677952 caaagctaattacaaggttatgagtgagcggaggggtaagagtcagcagaatcgtccaaagccttacaacgctcctgctgataaatgtaagcaaagggtg 30678051  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||||||||||| |  | || |||| ||||| ||||| | || || || |||||||| |||||  ||||||||||||||||||||    
T  30678052 aatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaagtgtggtgagaagagccacaagagtaatgtttgt 30678141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 254
Target Start/End: Complemental strand, 15462688 - 15462456
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagagg--taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagact 119  Q
    ||||||| ||| |||||||||||||||  ||||||  |||||| |||   ||||| || || || |||||||| |||||| |||| || || || ||| |    
T  15462688 aaagctcattacaaggtgatgagtgag--aagaggaataagggtcagagtagtcgcccgaagccctacagtgctcctgctaacaaaggcaaacagagatt 15462591  T
Q  120 gaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagat 219  Q
    |||||||||||||  ||| |   |||||||  |||||  |||  | || ||||| |||||||| | ||||||||||||||||||||| || |||| ||||    
T  15462590 gaatgatgagaggcagcctagagggagagagactcctgttgatgttgtgtgttacaagtgtggtgcgaaaggccacaagagtaatgtctgcaccagagat 15462491  T
Q  220 gagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    |||||||| || ||||| || |||||||| |||||    
T  15462490 gagaagaaatgtttcagatgcggtcagaaaggtca 15462456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 25958770 - 25958864
Alignment:
Q  110 agcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaat 204  Q
    ||||||||||| ||||||||||||| || || || |||||||||||||||||||| || || || | ||||||  |||||||||||| |||||||    
T  25958770 agcaaagactggatgatgagaggagacctaagagtagagatgctcctactgagattgtttgctacaggtgtggtaagaaaggccacaggagtaat 25958864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 273
Target Start/End: Original strand, 20010493 - 20010682
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtct-gttataagtgtggc 183  Q
    |||||||| ||| || |||| || || |||||| ||||||||||||||  ||| ||  ||||| ||||||||  |||  | || | |||| || |||||     
T  20010493 tacagtgctcctactaacaaaggcaaacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtattgttacaaatgtggt 20010592  T
Q  184 gagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || |||||||||||||| ||||| || || ||||||    
T  20010593 gtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaag 20010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 28312946 - 28312897
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  28312946 ggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28312897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 25115865 - 25115822
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  25115865 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 25115822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 16575203 - 16575157
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16575203 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16575157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 16620177 - 16620223
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16620177 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16620223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 28260162 - 28260211
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  28260162 ggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28260211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 28285754 - 28285705
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  28285754 ggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 28338911 - 28338960
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  28338911 ggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28338960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 21765127 - 21764976
Alignment:
Q  59 agggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctac 158  Q
    |||| ||||||||||| ||||| || || |||||||||||||| ||||| ||  | ||| ||   ||||| ||| |||| || | ||  ||||||||| |    
T  21765127 agggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaattagagaatggtcgatgataggcggcctaagaagaaggatgctcctgc 21765028  T
Q  159 tgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     ||||| |||||||  || ||||| ||||||||||||||||| |||||||||    
T  21765027 ggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 21764976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 22829354 - 22829397
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  22829354 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 22829397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 24292750 - 24292793
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  24292750 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 24292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 212
Target Start/End: Original strand, 18182349 - 18182507
Alignment:
Q  54 aggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgct 153  Q
    |||||| || |||||||||| |||||| || ||| |||| |||||||| ||||  || ||| || | |||||||||||||||||||  | || ||| |||    
T  18182349 aggtaaaggtcagcagagtcatcctaagccttaccgtgctcctgctgataaggagaaacaaggagttaatgatgagaggaggccgagaaagaaagaagct 18182448  T
Q  154 cctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtac 212  Q
      | ||||||| || |||||||  ||||| |||||||  || |||||||||| ||||||    
T  18182449 gttgctgagattgtttgttatacttgtggtgagaaagatcaaaagagtaatgcttgtac 18182507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 29589407 - 29589453
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||    
T  29589407 aagggacagcagagtcgtcctaagccgtacagtgcccccactgacaa 29589453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 27205938 - 27205901
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgc 92  Q
    |||||||||||||||||||||||||| |||||||||||    
T  27205938 ggtaagggacagcagagtcgtcctaagccgtacagtgc 27205901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 27243290 - 27243327
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgc 92  Q
    |||||||||||||||||||||||||| |||||||||||    
T  27243290 ggtaagggacagcagagtcgtcctaagccgtacagtgc 27243327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 2871770 - 2871813
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| | ||||||||||||||||||    
T  2871770 aagggacaacagagtcgtcctaagctgtacagtgcccctgctga 2871813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 5836196 - 5836239
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||    
T  5836196 aagggacaacagagtcgtcctaagccgtatagtgcccctgctga 5836239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 27559054 - 27559149
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||| ||||||||||||||||||| ||||||| |  | || | ||||||||| ||| |||||||  ||||||||||||  ||||| || ||||||    
T  27559054 tgtggtgagaaaggccacaagagtactgtttgtcctgaggaggtgaagaagtgtttccggtgtggcaagaagggtcacacattagctgactgcaag 27559149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 25756670 - 25756730
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgttt 208  Q
    ||||||||| | ||||| ||||||| ||| ||||| ||||||||||||||| | |||||||    
T  25756670 gatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaagtgcaatgttt 25756730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 151; Significance: 6e-80; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 267 - 525
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||||     
T  267 ggacaccaaagctcattataaggtgatgagtgaacgaagaggtaagggacaacagagtcaccctaagccgtacagtgcccctgctgacaagggaaagcag 366  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    | | ||||||||||||||||||| |||||||||||||||||| ||||||| || ||||| || ||||||  |||||||||||||||| ||||||||||||    
T  367 atattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaaatgtggcaggaaaggccacaagagtgatgtttgtacca 466  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| ||||||||||||||||| || ||||   |||| |||||||||    
T  467 aggatgagaagaagtgtttcaggtgtggtcagaaaggacacagcctagctgattgcaag 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 21331 - 21097
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || || ||||    
T  21331 aaagctcattacaaggtgatgagtgagcgtaaaggcaagggacagtagagtcgtcctaaaccgtatagtgcccctgctgacaaaggaaaacagaggctga 21232  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||| || ||||||| || || || |||||||| ||||||||||||||||||||||||||||| |||| |||    
T  21231 atgatgagaggaggcccaagaggagagatgcttctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtactaaaggtga 21132  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||||||||||||||||| |||||||| ||||    
T  21131 gaagaagtgcttcaggtgtggacagaagggacaca 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 6e-80; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 51603569 - 51603827
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||  |||| ||||| |||||     
T  51603569 ggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcag 51603668  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||| ||||||||| |||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||    
T  51603669 agacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtacca 51603768  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||||    
T  51603769 aggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaag 51603827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 53750247 - 53750505
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||  |||| ||||| |||||     
T  53750247 ggacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcag 53750346  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||| ||||||||| |||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||    
T  53750347 agacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtacca 53750446  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| ||||| ||||| ||||||||||||||| |||| |||||||||    
T  53750447 aggatgagaagaagtgtttcagatgtggacagaagggtcacatgctagccgattgcaag 53750505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 16151124 - 16150873
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| ||||| || || ||||||||||||||||| || ||||| ||||| ||| ||||||| |||||||| |   |||    
T  16151124 aaagctcattacaaggtgatgagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgacaaaggaaagcagaagttga 16151025  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||  ||| || || || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16151024 atgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatga 16150925  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||||||| || ||||   |||| |||||||||    
T  16150924 gaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaag 16150873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 16155270 - 16155019
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| ||||| || || ||||||||||||||||| || ||||| ||||| ||| ||||||| |||||||| |   |||    
T  16155270 aaagctcattacaaggtgatgagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgacaaaggaaagcagaagttga 16155171  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||  ||| || || || ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16155170 atgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatga 16155071  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||||||| || ||||   |||| |||||||||    
T  16155070 gaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaag 16155019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 14993151 - 14993402
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||||  || ||||| |||||||||||||||||||| ||||| ||| |||    
T  14993151 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtctgaagccgtatagtgcccctgctgacaagggtaagcagagattga 14993250  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||| || || ||||  |||||||| || ||||||||||||||||||||||||  |   ||  |    
T  14993251 atgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgtgagaa 14993350  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||||||| || ||||  ||||| |||||||||    
T  14993351 gaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaag 14993402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 15073847 - 15073596
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||| ||||||||||| |  || || |||||||    
T  15073847 aaagctcattataaggtgatgagtgagcgtagaggtaagggacagctgagtcgtccgaaaccgtatagtgctcctgctgacaaagttaaacagagactga 15073748  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |  ||||||||||||||||||||||| |||||||  |||||||| || |||||||||||||||||||| |||  |   |||||    
T  15073747 atgatgagaggaggcctaggaggagagatgctcctactgagattgtctgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgatga 15073648  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||| || ||||||||  |||| || ||||  ||||| |||||||||    
T  15073647 gaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaag 15073596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 3261572 - 3261829
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  3261572 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 3261671  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  3261672 aga-tgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 3261770  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  3261771 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 3261829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 248
Target Start/End: Complemental strand, 18259917 - 18259703
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    ||||||||||||||||| || || |||||||||||||||| ||| || ||||| ||||| |||||||||||||| ||||| ||  | |||||||||||||    
T  18259917 aaggtgatgagtgagcgtaggggcaagggacagcagagtcatccgaagccgtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagagga 18259818  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||| || |||| ||||||||||||| | || || || | ||||||||| || ||||||||||||||||||||||||   | ||||||||||||||||||    
T  18259817 ggcccaagaggacagatgctcctactaatattgtttgctttaagtgtggtgaaaaaggccacaagagtaatgtttgtgatagagatgagaagaagtgctt 18259718  T
Q  234 caggtgtggtcagaa 248  Q
    |||||||||||||||    
T  18259717 caggtgtggtcagaa 18259703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 20893525 - 20893268
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || || ||||||||||||||||||||||| || || ||||| ||||||||||| |||||||| |    
T  20893525 gacaccaaagctcattacaagataatgagtgagaggaggggcaagggacagcagagtcgtcctaagccttaaagtgctcctgctgacaaaggaaagcaga 20893426  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| |||||||| || ||||||||||||||| ||||||| || ||||| |||||||| || |||||| ||||||| |||||||||   |    
T  20893425 aga-tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggcaacaagagcaatgtttgtggta 20893327  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||||| ||||||||||||||||||||||||||| ||||  ||||| || ||||||    
T  20893326 gagatgagaggaagtgcttcaggtgtggtcagaagggacacaatttagctgaatgcaag 20893268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 15267264 - 15267038
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || ||||| |||||||| ||||||||||| || ||||| ||||| |||||||||||||| ||||| ||  | |    
T  15267264 aaagctcattacaaggtgatgagtgaacgcagaggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagaggttaa 15267165  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||  | || || || |  |||||||  ||||| ||||| |||||||||||||||  || ||||||    
T  15267164 atgatgagaggaggcccaagaggagagatgctcctacgaatattgtttgcttcaagtgtgatgagaagggccataagagtaatgtttgtgacagagatga 15267065  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  15267064 gaagaagtgcttcaggtgtggtcagaa 15267038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 29450315 - 29450572
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||||||| | ||||||||| | || ||||||||||| |||| |||||||||||| |||||||| ||||||||||| |||||||| |    
T  29450315 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaaggaaagcaga 29450414  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||        
T  29450415 aga-tgggtgatgataggaggcctaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggag 29450513  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | |||||| |||||||||||||||||||||||||  ||||| || ||||||    
T  29450514 gagatgataggaagtgtttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 29450572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 11204010 - 11204250
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || || ||||| ||||||||||| |||||| | |    
T  11204010 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagtaga 11204109  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| ||||| || || ||||||||||||||| ||||||| || |||||||||||||| ||||||||||||||||| |||||||||   |    
T  11204110 aga-tgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggta 11204208  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
     |||||| |  || ||||||||||||||||||||||||||||    
T  11204209 gagatgatagaaaatgcttcaggtgtggtcagaagggtcaca 11204250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 273
Target Start/End: Complemental strand, 7357737 - 7357504
Alignment:
Q  40 atgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactgaatgatgagaggaggccg 138  Q
    ||||||||| | || ||||||||||| |||| ||||||||| || |||| ||| ||||||||||| |||||||| |||| ||  |||||| ||||||||     
T  7357737 atgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacattgctcctgctgacaaaggaaagcagaaga-tgggtgatgataggaggccc 7357639  T
Q  139 aataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggt 238  Q
    || ||||||||||||||| ||||||| || ||||| ||| |||| ||||||||||||||||| ||||||| |   |||||||||| ||||||||||||||    
T  7357638 aagaggagagatgctcctgctgagattgtttgttacaagagtggtgagaaaggccacaagagcaatgtttatggtaaagatgagaggaagtgcttcaggt 7357539  T
Q  239 gtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||  ||||| || ||||||    
T  7357538 gtggtcagaagggtcacaatttagctgaatgcaag 7357504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 44658644 - 44658901
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||| ||||| |||||||| |    
T  44658644 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgcggacaaaggaaagcaga 44658743  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  | |||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  44658744 aga-tgggtcatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 44658842  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  44658843 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 44658901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 27903801 - 27903641
Alignment:
Q  94 cctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggcc 193  Q
    ||||||||||| ||||| |||||| |||||||||||||| |||| |   ||||||||||||||  |||  | || ||||| |||||||| | ||||||||    
T  27903801 cctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggcc 27903702  T
Q  194 acaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    ||||||||||||| || |||||||||||||||||||| ||||| ||||||||||| |||||    
T  27903701 acaagagtaatgtctgcaccaaagatgagaagaagtgtttcagatgtggtcagaaaggtca 27903641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 251
Target Start/End: Complemental strand, 13879594 - 13879368
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||||||||| | ||||||||| ||    ||||| |||||  ||||||| || || |||||||| |||| |||||| ||  |||||||| ||||||    
T  13879594 gctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgatgacaaagggtagcaaagattgaatg 13879495  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    |||||||||| || || || ||||||| | |||||||||| || ||||| |||||||| ||||| ||||||||||||||||| || |   | || |||||    
T  13879494 atgagaggagacctaagagaagagatgtttctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtatgcaatgatgaggagaa 13879395  T
Q  225 gaagtgcttcaggtgtggtcagaaggg 251  Q
    |||||||||| | |||||  |||||||    
T  13879394 gaagtgcttccgatgtggaaagaaggg 13879368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 14697553 - 14697401
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||| |||||||| || || |||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| |  | || ||||||| ||     
T  14697553 aagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcctagaaagaaagatgctactg 14697454  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||| || || ||||  ||||| ||||||||||| |||||||||| ||||    
T  14697453 ctgagattgtttgctatacttgtggtgagaaaggccataagagtaatgcttgt 14697401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 8709168 - 8708978
Alignment:
Q  19 atcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagac 118  Q
    |||||||||| ||| ||||| ||||||||||| ||    || || |||||  ||||||| || |  || ||||| ||||||||||| || |||||||||     
T  8709168 atcaaagctcattacaaggttatgagtgagcggaggaacaaaggtcagcaaggtcgtccgaagctctatagtgctcctgctgacaaagggaagcaaagat 8709069  T
Q  119 tgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||||||||| || || || | ||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||||||    
T  8709068 tgaatgatgagaggagacctaagagaatagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 8708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 13513802 - 13513650
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| ||||| || || |||||||||| ||| ||||| ||||| ||| ||  |||||| ||| |||| || | ||  |||||||||     
T  13513802 aagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctg 13513703  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| |||||||  || ||||||||||||||||||||||| |||||||||    
T  13513702 cagagattgtctgtttcaactgtggcgagaaaggccacaagagcaatgtttgt 13513650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 8482 - 8336
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||||||||| || |||||||| |||||||| ||||| || || ||| ||  |||||||||| | || |  | || ||||||||||  |||||    
T  8482 cagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgagaggcgccctataaagaaagatgctcctgttgaga 8383  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  8382 ttgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgt 8336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 16219634 - 16219488
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||| ||||||||| || || |||||||| |||||||| |||||||| |||||| | ||||| ||||||||||| |  | || ||||||||||  |||||    
T  16219634 cagccgagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgacgagaggaggcctagaaagaaagatgctcctgttgaga 16219535  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |  | || ||||  ||||||||||||||||| |||||||||| ||||    
T  16219534 ttatgtgctatacttgtggcgagaaaggccataagagtaatgcttgt 16219488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 16222954 - 16222808
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||| ||||||||| || || |||||||| |||||||| |||||||| |||||| | ||||| ||||||||||| |  | || ||||||||||  |||||    
T  16222954 cagccgagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgacgagaggaggcctagaaagaaagatgctcctgttgaga 16222855  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |  | || ||||  ||||||||||||||||| |||||||||| ||||    
T  16222854 ttatgtgctatacttgtggcgagaaaggccataagagtaatgcttgt 16222808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 18604378 - 18604531
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || | |||||||||||| ||||| ||||| ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  18604378 taagggccagcagagtcgccctaagccttataatgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctcct 18604477  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     | |||||  | |||| ||| |||||||||||||||||||||||||||||||||    
T  18604478 tcggagattatttgttttaactgtggcgagaaaggccacaagagtaatgtttgt 18604531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 15602 - 15743
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||||||  | |||||||| |||||||| ||||| || || ||| ||  |||||||||| | || |  | || ||||||||||  |||||    
T  15602 cagcagagtcgtcctaagacttacagtgctcctgctgataagggtaaacagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgaga 15701  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatg 205  Q
    | ||||| ||||  ||||| ||||||||||||||||||||||    
T  15702 ttgtctgctatacttgtggtgagaaaggccacaagagtaatg 15743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 8389861 - 8389812
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  8389861 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggg 8389812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 8050186 - 8050229
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  8050186 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 8050229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 14300542 - 14300585
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  14300542 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 14300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 12480049 - 12480003
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  12480049 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 12480003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 16233555 - 16233601
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16233555 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16233601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 17091712 - 17091758
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  17091712 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 17091758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 19775356 - 19775402
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  19775356 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 19775402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 23959196 - 23959150
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  23959196 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 23959150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 27714785 - 27714739
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  27714785 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 27714739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 14684016 - 14683973
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  14684016 aagggacagcagagtcgtcctaagccatacagtgcccctgctga 14683973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 40476489 - 40476446
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  40476489 aagggacagcggagtcgtcctaagccgtacagtgcccctgctga 40476446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 18224033 - 18224185
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| ||||| || || |||||||||| ||| ||||| || || ||| ||   ||||| ||  |||| || | ||  |||||||||     
T  18224033 aagggccagcagagtcgccctaagccttatagtgcccctgttgataagggcaaacagagaatggtcgatgatagacggcctaagaagaaggatgctcctg 18224132  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| || ||||  || ||||||||||||||||||||| |||||||||||    
T  18224133 cggagattgtttgtttcaactgtggcgagaaaggccacaagtgtaatgtttgt 18224185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 19635585 - 19635542
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||    
T  19635585 aagggacagcagagttgtcctaagccgtacagtgcccccgctga 19635542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 14162923 - 14162873
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    ||||||||| |||||||||||||| || |||||||| |||||||| |||||    
T  14162923 taagggacaacagagtcgtcctaagccttacagtgctcctgctgataaggg 14162873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 148; Significance: 4e-78; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 164188 - 164439
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| || ||  |||    
T  164188 aaagctcattacaaggtgatgagtgaacgaagaggtaaaggacagcagagtcgtcctaaatcatacagtgcccctgctgacaagggaaaacagaggttga 164287  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| ||||||||||| |||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||| | || |||||    
T  164288 atgatgagaggaggcccaataggagagacgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgttctaaggatga 164387  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||| ||||||||||||||||| || ||||  ||||  |||||||||    
T  164388 gaagaagtgtttcaggtgtggtcagaaaggacacactttagttgattgcaag 164439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 30487 - 30549
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| ||||||| ||||||| ||| ||||| ||||||||||||||||| |||| ||||    
T  30487 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgt 30549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 210
Target Start/End: Original strand, 43283 - 43428
Alignment:
Q  65 agcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagat 164  Q
    |||||||||| ||||| || || ||||| |||||||| ||||| || || ||| |   |||||| ||| |||| || | || ||||| || | |||| ||    
T  43283 agcagagtcgccctaagccttatagtgctcctgctgataagggtaaacagagaatagttgatgataggcggcccaagaagaaagatggtcttgctgaaat 43382  T
Q  165 agtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     ||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  43383 tgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgt 43428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 39120 - 39346
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||| || ||||| |||||||||||||||||||| || ||||    
T  39120 aaagctcattacaaggtgatgagtgaacgaagaggtaagggacagcagagtcttcctaaaccatatagtgctcctgctgacaagggaaagcagaggctga 39219  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||||||||||||||| ||||||| || || || |||||||| |||||||||||||||||||||||||||   ||||||||    
T  39220 atgatgagaggaggcccaagaggagagatgctcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtgataaagatga 39319  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  39320 gaagaagtgcttcaggtgtggtcagaa 39346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 14905 - 14753
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| | | |||| || | ||  |||||||||     
T  14905 aagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgatatgcggcctaagaagaaggatgctcctg 14806  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| || ||||  |||||||||||||| |||||||||||||||||||||    
T  14805 cggagattgtttgtttcaagtgtggcgagaatggccacaagagtaatgtttgt 14753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 180773 - 180877
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggatt 268  Q
    ||||| || ||||| | ||| |||||||||||||||| ||| ||  ||||||||||||| || ||||| || ||||||||||||||  |||| || ||||    
T  180773 tgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaagggtcatgtgttggctgatt 180872  T
Q  269 gcaag 273  Q
    |||||    
T  180873 gcaag 180877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 22639 - 22413
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  22639 aaagctcattatatggtgatgagtgggcgaaggggtaagggacagtagagtcttcctaaaccatacagtgcccctgccgacaaaggaaatcaaagactga 22540  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| ||||||||||||||||||  |||||| || ||||| |||||||||||||||||||||||||||||||||| ||| || |||||    
T  22539 atgatgagaggaggcccaataggagagatgctcctgttgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttttactaaggatga 22440  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||| ||||||| ||||||||||||    
T  22439 gaagaaatgcttcaagtgtggtcagaa 22413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 53204 - 53433
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| ||| |||| |||||||||||||||||||||||||| ||||||||| ||   |||||||||||| ||||||||||||||||||||||||||||| |    
T  53204 gacaccaaggctcattataaggtgatgagtgagcgaagagataagggacatcaagttcgtcctaaaccatacagtgcccctgctgacaagggaaagcaga 53303  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    || ||||||||||||||||||| |||||||||||||||| | ||| ||| || ||||| |||||||||||||||||||||||||||||||||||||| ||    
T  53304 gattgaatgatgagaggaggcccaataggagagatgctcttgctgggatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaa 53403  T
Q  216 agatgagaagaagtgcttcaggtgtggtca 245  Q
     ||||||||||| || ||||||||||||||    
T  53404 ggatgagaagaaatgattcaggtgtggtca 53433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 7555 - 7304
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| |||||  | || ||||||||||||||||| || ||||| ||||| |||| ||||||||| ||||| ||  |||    
T  7555 aaagctcattacaaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgttgacaagggtaagcagaggttga 7456  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  7455 atgatgagaggaggcccaataggagagatgctcctgctgagattgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatga 7356  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||||||| || ||||   |||| |||||||||    
T  7355 gaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaag 7304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 8242 - 8500
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    |||||| ||||||| ||| |||||||||||||| || || || |||||||| ||||||||||| || ||||| ||||| ||||||||||||||||||||     
T  8242 ggacatgaaagctcattacaaggtgatgagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcag 8341  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    || ||||||||||||||||| || || ||||||||||||| |  ||| || || |||||||||||||||||||| ||||||||||||||||||||||| |    
T  8342 aggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtacta 8441  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| |||||||||||||||||||| ||||   |||| |||||||||    
T  8442 aggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaag 8500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 18456 - 18714
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    |||||| ||||||| ||| |||||||||||||| || || || |||||||| ||||||||||| || ||||| ||||| ||||||||||||||||||||     
T  18456 ggacatgaaagctcattacaaggtgatgagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcag 18555  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    || ||||||||||||||||| || || ||||||||||||| |  ||| || || |||||||||||||||||||| ||||||||||||||||||||||| |    
T  18556 aggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtacta 18655  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | |||||||||||||| |||||||||||||||||||| ||||   |||| |||||||||    
T  18656 aggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaag 18714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 1010 - 1246
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||| ||||| |||||     
T  1010 ggacaccaaagctcattataaggtgaagagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccggctgataagggtaagcag 1109  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||||| ||||||||||||||||||| || ||  | |||| || |||||||||| || | |||||||||||||||||| ||||||||||| ||||||||||    
T  1110 agacttaatgatgagaggaggccgagtaagaagggtgcttctgctgagatagtatgctttaagtgtggcgagaaaggtcacaagagtaacgtttgtacca 1209  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaaggg 251  Q
    | |||||||||||||| ||||| ||||| ||||||||    
T  1210 aggatgagaagaagtgtttcagatgtggacagaaggg 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 1018 - 799
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||| ||| ||||||    
T  1018 gctcattacaaggtgatgagtgagcgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagagattgaatg 919  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| || ||||||||||||||| ||||||| || || || ||||||||| |||||||||||||||||||||| |||   |||||||||||    
T  918 atgagaggaggcctaagaggagagatgctcctgctgagattgtttgctacaagtgtggctagaaaggccacaagagtaatgtctgtgataaagatgagaa 819  T
Q  225 gaagtgcttcaggtgtggtc 244  Q
    ||||| ||||||||||||||    
T  818 gaagtacttcaggtgtggtc 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 4996 - 5243
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| ||||||||||| ||| || |||||||||||||||| || ||||| ||||||||||||||||||||||| ||||    
T  4996 aaagctcattacaaggtgatgagtgaacgaagaggtaaaggaaagtagagtcgtcctaaaccatatagtgctcctgctgacaagggaaagcaaaggctga 5095  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    || |||||||| |||| |  ||||||||||||||| ||||||| || || || ||||||||||| |||||||||||||||||||| |||   || |||||    
T  5096 ataatgagaggtggcctaggaggagagatgctcctgctgagattgtttgctacaagtgtggcgaaaaaggccacaagagtaatgtctgtgataaggatga 5195  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    |||||||||||||||||||||||||||||| ||||  ||||| |||||    
T  5196 gaagaagtgcttcaggtgtggtcagaagggacacactttagctgattg 5243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 20832757 - 20833007
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || ||||| |||||||||||||||||||||||||  || ||||| |||||||||||||||||||| || ||||    
T  20832757 aaagctcattacaaggtgatgagtgaccgtagaggcaagggacagcagagtcgtcctaaaca-tatagtgctcctgctgacaagggaaagcagaggctga 20832855  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||||||||| || || |||||||||||||||  ||| || || || || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  20832856 atgatgagaggagacccaagaggagagatgctcctgttgatattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatga 20832955  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||| || ||||||||||||||||| || ||||   |||| |||||||||    
T  20832956 gaagaattgtttcaggtgtggtcagaaaggacacacactagctgattgcaag 20833007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 21742408 - 21742659
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||| ||| |||||||||| ||||| |||||||    
T  21742408 aaagctcattacaaggtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgctcctactgacaagggtaagcagagactga 21742507  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||||||  | || |  |||||||| ||||||||||||||||||||||| |||  |  ||||||    
T  21742508 atgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtatgtgaccgagatga 21742607  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||||| |||||||||||||| || ||||  || || |||||||||    
T  21742608 gaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaag 21742659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 20074559 - 20074799
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || ||||||||  |||||||||| |||||||| |    
T  20074559 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgcttctgctgacaaaggaaagcaga 20074658  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||| |||||| |||||||  || |||||||||||||| |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||  |    
T  20074659 aga-tgagtgatgacaggaggcttaagaggagagatgctcccactgagattgtgtgttacaagtgtggtgagaaaggccacaagagcaatgtttgtagta 20074757  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  20074758 aagatgagaggaagtgcttcaggtgtggtcagaagggtcaca 20074799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 21961567 - 21961327
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | ||||||||||||||||||| ||||||||| || |||||||| ||| ||||||| |||||||| |    
T  21961567 gacaccaaagctcattacaagataatgagtgagaggagaggtaagggacagcagaatcgtcctaagccttacagtgctccttctgacaaaggaaagcaga 21961468  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| ||||| || || ||||||||||||||| ||||||| || ||||| |||||||| || |||||||||||||| |||||||||   |    
T  21961467 aga-tgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggta 21961369  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  21961368 aagatgagaggaagtgcttcaggtgtggtcagaagggacaca 21961327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 25 - 248
Target Start/End: Complemental strand, 19857805 - 19857582
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| |||||||||||||| || |||||||||||||| ||||||||||||||||| || ||||| |||||||||||||| ||||| ||  ||||||    
T  19857805 gctcattacaaggtgatgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagaggttgaatg 19857706  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| || |||||||||||| |||| ||||| || || |  |||||||| || |||||||||||||||||||| |||   | |||||||||    
T  19857705 atgagaggaggcctaagaggagagatgcttctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaa 19857606  T
Q  225 gaagtgcttcaggtgtggtcagaa 248  Q
    ||| ||||||||||||||||||||    
T  19857605 gaaatgcttcaggtgtggtcagaa 19857582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 21738892 - 21739118
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || |||||||||||||| ||||||||||| || || || || |||| |||||||||||| ||||| ||| |||    
T  21738892 aaagctcattacaaggtgatgagtgaccgcagaggtaagggacaacagagtcgtccgaagccatatagcgcccatgctgacaagggtaagcagagattga 21738991  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||||||| |||||||||||||||  | || |  |||||||| |||||||||||||||||||||||||||     ||||||    
T  21738992 atgatgagaggaggcctaagaggagaggtgctcctactgagattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtttgtgatcgagatga 21739091  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||| ||||||||||||||    
T  21739092 gaagaagtgctttaggtgtggtcagaa 21739118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 31536847 - 31537104
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || || ||||| ||||||||||| |||||||| |    
T  31536847 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagcaga 31536946  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    |  |||||||||| ||||| || || ||||||||||||||| ||||||| || |||||||||||||| ||||||||||||||||| |||||||||   |     
T  31536947 ggatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagtgtggtgagaaaggccacaagagcaatgtttgtggtag 31537046  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||| |  || ||||||||||||||||||||||||||||  ||||| || ||||||    
T  31537047 agatgatagaaaatgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 31537104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 40 - 256
Target Start/End: Complemental strand, 52989257 - 52989041
Alignment:
Q  40 atgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactgaatgatgagaggaggccg 138  Q
    ||||||||| | || |||||||||||||| | ||||||||| || |||||||| ||||||||||| |||||||| |||| |||||||||| ||||||||     
T  52989257 atgagtgagaggaggggtaagggacagcaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaaga-tgaatgatgataggaggcct 52989159  T
Q  139 aataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggt 238  Q
    || ||||||||||||||| ||||||| || ||||| |||||||| || |||||||||||||| |||||||||   |||||||||| |||||| |||||||    
T  52989158 aagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgtttcaggt 52989059  T
Q  239 gtggtcagaagggtcaca 256  Q
    ||||||||||||||||||    
T  52989058 gtggtcagaagggtcaca 52989041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 248
Target Start/End: Original strand, 24096465 - 24096697
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||||||| ||||||||||||| |||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||| || |    
T  24096465 gacaccaaagctcattacaaggtgacgagtgagcgaagaagtaagggacaacagagtcgtcctaaaccttatagtgctcctgctgacaaaggaaaacaga 24096564  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    |  ||||||||||||||||||| || |||||||||||||||  |||||| || ||||  |||||||| || ||||||||||||||||||| ||||   |     
T  24096565 ggatgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtggtag 24096664  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||| |||||| || ||||||||||||||    
T  24096665 agatgagaggaagtgttttaggtgtggtcagaa 24096697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 20297923 - 20297683
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||| ||||||||||||| || |    
T  20297923 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacatcagaatcgtcctaagccttacagtgctcctactgacaagggaaaacaga 20297824  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || ||||||||||||||| ||||||| || ||||| |||||||| |||||| ||||||||||||||||||||   |    
T  20297823 aga-tgggtgatgacaggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaatgccacaagagtaatgtttgtggta 20297725  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  20297724 aagatgagaggaagtgcttcaggtgtggttagaagggtcaca 20297683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 38909676 - 38909933
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||| | ||||||| | | || ||||||||||| |||| |||||||||||| |||||||| ||||||||||| |||||||| |    
T  38909676 gacaccaaagctcattacaagataatgagtgggaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaaggaaagcaga 38909775  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
    |  ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |     
T  38909776 ggatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaag 38909875  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  38909876 agatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 38909933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 22015601 - 22015852
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| || || |||||||||||||||||||| || ||||| ||||| |||||||||||||| ||| | ||| | |    
T  22015601 aaagctcattacaaggtgatgagtgagcgtaggggaaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagaagagaataa 22015700  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || | |||||||||||||||  | || || || |  |||||||| || |||||||| || ||||||||||||   | ||||||    
T  22015701 atgatgagaggaggccaaagaagagagatgctcctacaaatattgtttgattcaagtgtggagaaaaaggccaaaaaagtaatgtttgtgatagagatga 22015800  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||||||| || ||||  ||||| |||||||||    
T  22015801 gaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaag 22015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 48426413 - 48426156
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  48426413 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 48426314  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  48426313 aga-tgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 48426215  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  48426214 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 48426156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 37680589 - 37680332
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||| ||||||| |||||||| |    
T  37680589 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcaga 37680490  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || ||||||||| |||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  37680489 aga-tgggtgatgataggaggcccaagaggagagatactcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 37680391  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  37680390 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 37680332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 18273298 - 18273114
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||||||||| | ||||||||| ||    ||||| |||||  ||||||| || || |||||||| |||| |||||| ||  |||||||| ||||||    
T  18273298 gctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgttgacaaaggggagcaaagattgaatg 18273199  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||||||||| || || || ||||||| |||||||||||| || ||||| |||||||| ||||| ||||||||||||||||||||    
T  18273198 atgagaggagacctaagagaagagatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttg 18273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 273
Target Start/End: Original strand, 20853679 - 20853867
Alignment:
Q  85 tacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcg 184  Q
    |||||||| ||| || |||| || || |||||| ||||||||||||||  ||| ||  ||||| ||||||||  |||  | || ||||| || ||||| |    
T  20853679 tacagtgctcctactaacaaaggcaaacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtg 20853778  T
Q  185 agaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     ||| |||||||||||||||| ||| ||| ||||||||||||| || ||||| || |||||||||||||| ||||| || || ||||||    
T  20853779 tgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcagatgcggtcagaagggtcatatgttggctgaatgcaag 20853867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 16379574 - 16379407
Alignment:
Q  45 tgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaatagg 144  Q
    |||||| | ||| ||||| || |||||||||||||| || ||||||||| ||||||| ||||| || || ||| | |||||||||||||||||||  | |    
T  16379574 tgagcggaaaggcaagggtcaacagagtcgtcctaagccttacagtgcctctgctgataagggcaaacagagagttaatgatgagaggaggccgagaaag 16379475  T
Q  145 agagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtac 212  Q
    | ||||| |  | ||||||| || || |||   ||||| |||||||||||||| ||||||||||||||    
T  16379474 aaagatgttgttgctgagattgtttgctatgcttgtggtgagaaaggccacaaaagtaatgtttgtac 16379407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 21228447 - 21228600
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  21228447 taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggtaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcct 21228546  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     | ||||| || ||||  || |||||||||||||||||||||||||||||||||    
T  21228547 gcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 21228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 41350560 - 41350612
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  41350560 ggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggg 41350612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 212
Target Start/End: Complemental strand, 21752527 - 21752360
Alignment:
Q  45 tgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaatagg 144  Q
    |||||||| || |||||| ||||||||||||||||| || ||||||||| ||||||| |||||||| || ||| ||  ||| || |||   ||||  | |    
T  21752527 tgagcgaaaagctaagggtcagcagagtcgtcctaagccttacagtgccactgctgataagggaaaacagagagtggttgaagataggcacccgagaaag 21752428  T
Q  145 agagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtac 212  Q
    | ||||||||||  |||||| ||||| ||||  ||||| ||||||||||| ||||| |||| ||||||    
T  21752427 aaagatgctcctgatgagattgtctgctatacttgtggtgagaaaggccaaaagagcaatgcttgtac 21752360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 51330384 - 51330430
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  51330384 ggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 51330430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 16347490 - 16347539
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16347490 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggg 16347539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 16354138 - 16354187
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16354138 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggg 16354187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 33387924 - 33387970
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33387924 aagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 33387970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 21045046 - 21045122
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggag 134  Q
    ||||| ||||| |||||||| || || |||||||| |||||||| ||||| ||||||||| | ||||||||||||||    
T  21045046 aagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggcaagcaaagagttaatgatgagaggag 21045122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 208
Target Start/End: Original strand, 17041907 - 17042057
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||| ||||| ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  17041907 taagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctcct 17042006  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgttt 208  Q
     | |||||  | ||||  || ||||||| |||||||||||||||||||||||    
T  17042007 tcggagat-ttttgtttcaactgtggcgggaaaggccacaagagtaatgttt 17042057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 19109834 - 19109791
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  19109834 aagggacaacagagtcgtcctaagccgtacagtgcccctgctga 19109791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 21833766 - 21833723
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  21833766 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 21833723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 22117181 - 22117102
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggcc 137  Q
    ||||| ||||| |||||||| || || |||||||  |||||||| |||||||| |||||| | |||||||||||||||||    
T  22117181 aagggtcagcaaagtcgtccaaagccttacagtgttcctgctgataagggaaaacaaagagttaatgatgagaggaggcc 22117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 21842676 - 21842633
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  21842676 aagggacatcagagtcgtcctaagccgtacagtgcccccgctga 21842633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 22400784 - 22400741
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||| |||||||||||||||| | ||||||||||||||||||    
T  22400784 aagggagagcagagtcgtcctaagctgtacagtgcccctgctga 22400741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 22402060 - 22402010
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaaggg 107  Q
    |||||| ||||||||||| ||||| || ||||||||||||||||| |||||    
T  22402060 taagggtcagcagagtcgccctaagccttacagtgcccctgctgataaggg 22402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 54571 - 54330
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    |||||| ||||||| |||||||||||||||||| |||||  | || ||||| ||||||||||| || ||||| ||||| ||||||||||| || |||||     
T  54571 ggacatgaaagctcattataaggtgatgagtgatcgaaggagcaaaggacatcagagtcgtccaaagccgtatagtgctcctgctgacaaagggaagcag 54472  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||  ||||||||||||||||||| |||||  || |||||| | ||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |    
T  54471 aggttgaatgatgagaggaggcccaatagatgaaatgctcttgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtacta 54372  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  54371 aagatgagaagaagtgtttcaggtgtggtcagaagggacaca 54330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 1098 - 1324
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  1098 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgctgacaagggtaaacagaggctga 1197  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||||||| | ||||  |||||||| || ||||||||||||||||||| ||||   | ||||||    
T  1198 atgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtgatagagatga 1297  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  1298 gaagaagtgcttcaggtgtggtcagaa 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 8261 - 8035
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||| ||||||||||| || || |||||||| |||||||||||||| || || || ||||    
T  8261 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgctgacaagggtaaacagaggctga 8162  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||||||| | ||||  |||||||| || ||||||||||||||||||| ||||   | ||||||    
T  8161 atgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagtgtggtgaaaaaggccacaagagtaatgcttgtgatagagatga 8062  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  8061 gaagaagtgcttcaggtgtggtcagaa 8035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 37456 - 37222
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || |||||||||||||||||||||||||| || ||||| ||||| | ||| |||||||| ||||| ||| |||    
T  37456 aaagctcattacaaggtgatgagtgaacgtagaggtaagggacagcagagtcgtccgaagccgtatagtgctcttgccgacaagggtaagcagagattga 37357  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||||||||  |||||||||| ||  | || |  ||||||||||||||||||||||||||||||||||||   ||||||||    
T  37356 atgatgagaggaggcccaagaggagagacactcctactgatattttttgcttcaagtgtggcgagaaaggccacaagagtaatgtttgtgataaagatga 37257  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||||||||||||||||||||||||||||| ||||    
T  37256 gaagaagtgcttcaggtgtggtcagaagggacaca 37222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 15589 - 15363
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| ||||   | || ||||| ||||||||||| || ||||| ||||| |||||||||||| ||||||| ||  | |    
T  15589 aaagctcattacaaggtgatgagtgatcgaatgagcaaaggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagcgaaagcagaggttaa 15490  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||||||||||||||| || || ||    
T  15489 atgatgagaggaggcccaataggagagatgctcctgctgagattttctgctataagtgtggcgagaaaggccacaagagtaatgtttgtactaaggacga 15390  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  15389 gaagaagtgcttcaggtgtggtcagaa 15363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 123; Significance: 3e-63; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 319760 - 319534
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||| ||||| ||||| || || ||||||||||||||||| || ||||| ||||| |||||||||||||  ||||| || ||||    
T  319760 aaagctcattacaaggtgataagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaggataagcagaggctga 319661  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |||||||||||||||||| ||| ||| || || || |||||||||||||||||||||||||||||||| |||   ||||||||    
T  319660 atgatgagaggaggcccaataggagagatgctcctgctgggattgtttgctacaagtgtggcgagaaaggccacaagagtaatgtctgtgataaagatga 319561  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  319560 gaagaagtgcttcaggtgtggtcagaa 319534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 94 - 248
Target Start/End: Complemental strand, 326151 - 325998
Alignment:
Q  94 cctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggcc 193  Q
    |||||| ||||||| ||||| || |||||||||||||||||||| |||||||||||||||||| ||||||| || || || |||||||||||||||| ||    
T  326151 cctgctaacaagggtaagcagaggctgaatgatgagaggaggcc-aataggagagatgctcctgctgagattgtttgctacaagtgtggcgagaaagacc 326053  T
Q  194 acaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaa 248  Q
    ||||||||||||| |||   |||||||||||||||||||||| ||||||||||||    
T  326052 acaagagtaatgtctgtgataaagatgagaagaagtgcttcaagtgtggtcagaa 325998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 234
Target Start/End: Original strand, 200338 - 200476
Alignment:
Q  96 tgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccac 195  Q
    ||||||||| || ||| ||||| |||||||||||||||| || || || ||||| | ||||| |||||| || || || |||||||| ||||| ||||||    
T  200338 tgctgacaaagggaagtaaagattgaatgatgagaggagacctaagagaagagaagttcctaatgagattgtttgctacaagtgtggtgagaagggccac 200437  T
Q  196 aagagtaatgtttgtaccaaagatgagaagaagtgcttc 234  Q
    |||||||||||||| |     ||||||||||||||||||    
T  200438 aagagtaatgtttgcaatggtgatgagaagaagtgcttc 200476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 173
Target Start/End: Complemental strand, 2348 - 2197
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||    
T  2348 aaagctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctactgacaaaggaaagcaaaggttga 2249  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgtta 173  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  2248 atgatgagaggaggcggaataggagagatgctcctgctgagatagtttgtta 2197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 50622 - 50375
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| ||||||||||||||| |||| || ||||| |||||||||||||||||||| ||||| |||  ||    
T  50622 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtggtccgaagccgtatagtgcccctgctgacaagggtaagcatagatgga 50523  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||| || || ||||  |||||||| || |||| |||||||||||||||||||  |  ||||||    
T  50522 atgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaagaccacaagagtaatgtttgtgaccgagatga 50423  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||| ||||||||||||||||| || ||||  ||||| |||||    
T  50422 gaagaagtgtttcaggtgtggtcagaaaggacacaccttagctgattg 50375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 248
Target Start/End: Original strand, 62558 - 62785
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| ||||| ||||| |||||||||||||| || ||||| |||||||||||||||||||| ||||| ||| ||    
T  62558 caaagctcattacaaggtgatgagtgagcgtagaggcaaggggcagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagagattg 62657  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || |||||||||||||||||||| || || |  |  |||||||| ||||||||||||||||||||||| |||  | | ||||    
T  62658 aatgatgagaggaggcctaagaggagagatgctcctactgatattgtttaattcaagtgtggtgagaaaggccacaagagtaatgtatgtgaccatgatg 62757  T
Q  221 agaagaagtgcttcaggtgtggtcagaa 248  Q
    ||||||||||||| ||||||||||||||    
T  62758 agaagaagtgctttaggtgtggtcagaa 62785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 65211 - 65311
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcaga 247  Q
    ||||||||| ||||| | || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  65211 gatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaaaaagtgcttcaggtgtggtcaga 65310  T
Q  248 a 248  Q
    |    
T  65311 a 65311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 65109 - 65214
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||| ||||   ||| ||||| |||||||| || || || || |||||||||||||| ||||| ||||| |||||||    
T  65109 aaagctcattacaaggtgatgagtgagagaaggaataatggacaacagagtcgcccgaagccatatagtgcccctgctgataagggcaagcagagactga 65208  T
Q  122 atgatg 127  Q
    ||||||    
T  65209 atgatg 65214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 25 - 242
Target Start/End: Complemental strand, 30041 - 29824
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||  ||||| ||||||||||| || ||||| ||||||||||    
T  30041 gctcattataaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaaaccgtctagtgctcctgctgacaaaggtaagcagagactgaatg 29942  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| |  |||||||||||||||| ||||||||||| ||  |||||||| || || |||||||||||||||||||||| | | ||||||||    
T  29941 atgagaggaggcctaggaggagagatgctcctattgagatagtctatttcaagtgtggtgaaaagggccacaagagtaatgtttgtaaccatgatgagaa 29842  T
Q  225 gaagtgcttcaggtgtgg 242  Q
    |||||| ||| |||||||    
T  29841 gaagtgtttccggtgtgg 29824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 70626 - 70374
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| |||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| ||||||||||| || || || || |||    
T  70626 caaagctcattataaagtgatgagtgagcgcagaggtaagggacaacagagtcgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctg 70527  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || |||||||||||||||||||||||  | || | ||||||||| ||||||||||||||||||||||| |||  |  |||||    
T  70526 aatgatgagaggaggcctaagaggagagatgctcctactgagattatttgctttaagtgtggtgagaaaggccacaagagtaatgtgtgtgaccgagatg 70427  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||| ||||| ||||| ||||| || ||||  || || |||||||||    
T  70426 agaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaag 70374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 273
Target Start/End: Original strand, 98373 - 98621
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| ||||| ||||||||  | |||||||||||||| ||||||||||| || || || ||||| | |||||||||||| ||||| ||  | ||||    
T  98373 gctcattacaaggtaatgagtgaaaggagaggtaagggacaacagagtcgtccgaagccatatagtgctcatgctgacaagggtaagcagaggttaaatg 98472  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| ||  |||||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  98473 atgagaggaggcccaagtggagagatgctcctgctgagatcgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaa 98572  T
Q  225 gaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||| ||||||||||||||||| || ||||   |||| |||||||||    
T  98573 gaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaag 98621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 176504 - 176253
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||  |||| |  || || |||||||    
T  176504 aaagctcattataaggtgatgagtgagcgtagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgccaacaaagttaaacagagactga 176405  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |  ||||||||||||||||| ||||| |||||||  |||||||| || |||||||||||||||||||| |||  |   |||||    
T  176404 atgatgagaggaggcctaggaggagagatgctcctacagagattgtctgtttcaagtgtggtgaaaaaggccacaagagtaatgtatgtgaccgtgatga 176305  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||| || ||||||||  |||| || ||||  ||||| |||||||||    
T  176304 gaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaag 176253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 30 - 273
Target Start/End: Complemental strand, 9123 - 8880
Alignment:
Q  30 ttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgag 129  Q
    |||| ||||||||||||| |||||  | || ||||||||||||||||| || ||||| ||||| ||||||||||| || ||||| |  ||||||||||||    
T  9123 ttattaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagctgaatgatgag 9024  T
Q  130 aggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagt 229  Q
    || || || || |||||||||||||||  |||||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  9023 agaagacccaagaggagagatgctcctgatgagattgtttgttataagtgtggcgagaatggccacaagagtaatgtttgtactaaagatgagaagaagt 8924  T
Q  230 gcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    | ||||||||||||||||| || ||||   |||| |||||||||    
T  8923 gtttcaggtgtggtcagaaaggacacactctagctgattgcaag 8880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 25 - 248
Target Start/End: Original strand, 9562 - 9785
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||| || ||||| | |||||| ||||||||||||||  ||||||    
T  9562 gctctttacaaggtgatgagtgaacgaagaggtaaaggacagcagagtcatcctaaaccatatagtgctcttgctgataagggaaagcaaaggatgaatg 9661  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| || ||||||||||||||| |||| || || || || |||||||| ||||| ||||||||||||||||| |||   || ||||||||    
T  9662 atgagaggaggccaaacaggagagatgctcctgctgatattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgtgataaggatgagaa 9761  T
Q  225 gaagtgcttcaggtgtggtcagaa 248  Q
    ||||||||||||||||||||||||    
T  9762 gaagtgcttcaggtgtggtcagaa 9785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 23774 - 23920
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||||||||| || |||||||| |||||||| ||||| || || ||| ||  |||||| ||| |||| || | || |||| ||| |  |||||    
T  23774 cagcagagtcgtcctaagccatacagtgctcctgctgataagggcaaacagagaatggttgatgataggtggcctaagaagaaagatactcatgttgaga 23873  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||||||||  ||||| |||||||||||||||||||||| ||||    
T  23874 ttgtctgttatacttgtggtgagaaaggccacaagagtaatgcttgt 23920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 116; Significance: 5e-59; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 74 - 273
Target Start/End: Complemental strand, 116027 - 115828
Alignment:
Q  74 gtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgtta 173  Q
    ||||||| |||||||| ||||||||||  |||||||||||| |||||||||||||||| ||||| ||  | |||||  ||||| |||| ||||| || |     
T  116027 gtcctaagccgtacagcgcccctgctggtaagggaaagcaacgactgaatgatgagagaaggcccaagggaagagacactcctgctgaaatagtttgctt 115928  T
Q  174 taagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  115927 taagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaag 115828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 93828 - 93932
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggatt 268  Q
    ||||| || ||||| | ||| |||||||||||||||| ||| ||  ||||||||||||| || ||||| || |||||||| |||||  |||| |||||||    
T  93828 tgttacaaatgtggtgtgaagggccacaagagtaatgcttgcactcaagatgagaagaaatgtttcagatgcggtcagaaaggtcatgtgttggcggatt 93927  T
Q  269 gcaag 273  Q
    |||||    
T  93928 gcaag 93932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 107600 - 107643
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  107600 aagggacaacagagtcgtcctaagccgtacagtgcccccgctga 107643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 8595 - 8543
Alignment:
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |||||||  |||||| ||| ||||||||||||||||||||||| |||| ||||    
T  8595 ctgagattatctgttttaattgtggcgagaaaggccacaagagcaatgcttgt 8543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 5570 - 5344
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||| |||||||| |||||||| || ||  |||    
T  5570 aaagctcattacaaggtgatgagtgaacgaagaggtaaaggacaacagagtcgtcctaaaccatatagtgctcctgctgataagggaaaacagaggttga 5471  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |  ||||||||||||||| ||||||| || || || ||||| |||||||||||||||| ||||||||| |||   ||||||||    
T  5470 atgatgagaggaggcccacgaggagagatgctcctgctgagattgtttgctacaagtgcggcgagaaaggccacaggagtaatgtctgtgataaagatga 5371  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||| ||||    
T  5370 gaagaagtgcttcaggtgtggttagaa 5344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 34854 - 34628
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || ||||| |||||||||||||||||||| || | ||| ||||| |||||||||||||| ||||||||  | |    
T  34854 aaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagctgtatagtgctcctgctgacaagggtaagcaaaggttaa 34755  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||| || || ||||  |||||||| ||||||||||||||||||||||| |||   | ||||||    
T  34754 atgatgagaggaggcccaagaggagagatgctcctactgacattgtttgtttcaagtgtggtgagaaaggccacaagagtaatgtctgtgatagagatga 34655  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||| ||||    
T  34654 gaagaagtgcttcaggtgtggttagaa 34628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 268
Target Start/End: Complemental strand, 43215 - 42969
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||| ||||  |||| ||||||||| |||||||||| || ||||| |||||||||||||||||||| || || ||  |||    
T  43215 aaagctcattacaaggtgatgagtaagcgccgaggcaagggacagtagagtcgtccgaagccgtatagtgcccctgctgacaagggtaaacagaggttga 43116  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||||||| | ||||  |||||| | |||||||||||||||||||||||||||  |  ||||||    
T  43115 atgatgagaggaggcctaagaggagagatgctcctactgagataatttgtttcaagtgttgtgagaaaggccacaagagtaatgtttgtgaccgagatga 43016  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggatt 268  Q
    |||||||||||| |||||| ||||||| || ||||  ||||||||||    
T  43015 gaagaagtgctttaggtgtagtcagaaaggacacactttagcggatt 42969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 1059 - 1243
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||| ||||| |||||||    
T  1059 aaagctcattataaggtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgttgacaagggtaagcagagactga 1158  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgt 206  Q
    |||||||||||||||| |  |||||||||||||||||| |||| ||||||| ||| ||||| || |||||||||||| |||||||    
T  1159 atgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgt 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 269
Target Start/End: Complemental strand, 5698 - 5451
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| || |||||||||||||  ||||  |||||||||||||||| ||  || ||||||||||||||| |||||||||| ||||| ||| ||    
T  5698 caaagctcattacaaagtgatgagtgagcatagagtcaagggacagcagagtcatcggaagccgtacagtgcccctactgacaagggtaagcagagattg 5599  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || |||||||||||||||||||| || || ||||  |||||||| || ||||||||||||||||||||||||  |  |||||    
T  5598 aatgatgagaggaggcc-aagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatg 5500  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    |||||||||||||||||||||||||||| || ||||  ||||| |||||    
T  5499 agaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattg 5451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 273
Target Start/End: Complemental strand, 17155 - 16903
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||||||||||||||| | ||| |||||||| ||||||||||| || ||||| ||||| ||||| |||||||| ||||| | ||||    
T  17155 caaagctcattacaaggtgatgagtgagcgcaaaggcaagggacaacagagtcgtccgaagccgtatagtgctcctgccgacaagggtaagcagaaactg 17056  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || |||||||||||||||||||||||  | ||||  |||||||| ||||||||||||||||||||||| |||     |||||    
T  17055 aatgatgagaggaggcctaagaggagagatgctcctactgagattatttgtttcaagtgtggagagaaaggccacaagagtaatgtgtgtgatcgagatg 16956  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||| |||||||||||||| || ||||  || || |||||||||    
T  16955 agaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaag 16903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 22 - 206
Target Start/End: Original strand, 28072 - 28256
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||| ||||| |||||||    
T  28072 aaagctcattataaggtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgttgacaagggtaagcagagactga 28171  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgt 206  Q
    |||||||||||||||| |  |||||||||||||||||| |||| ||||||| ||| ||||| || |||||||||||| |||||||    
T  28172 atgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtggtgaaaaaggccacaagggtaatgt 28256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 5689 - 5877
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||||||||||| ||| || ||||| ||||| |||||||||||||| ||||| |||||||    
T  5689 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcatccgaagccgtatagtgctcctgctgacaagggtaagcagagactga 5788  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    |||||||||||||||| || |||||||||||||||||||| || || | ||| |||||||| || ||||||||||||||||||||||||    
T  5789 atgatgagaggaggcccaagaggagagatgctcctactgatattgtttattacaagtgtggtgaaaaaggccacaagagtaatgtttgt 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 25 - 273
Target Start/End: Complemental strand, 52165 - 51917
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||| ||||| |||| ||| ||||| ||||||||||| || || || || |||||||    
T  52165 gctcattataaagtgatgagtgagcgcagaggtaagggacagcagagccgtccgaaactgtatagtgctcctgctgacaaaggtaaacagaggctgaatg 52066  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaa 224  Q
    ||||||||||||| |  |||||||||||||||||||||||  ||||||  |||||||| ||||||||||||||||||||||| |||     |||||||||    
T  52065 atgagaggaggcctaggaggagagatgctcctactgagattatctgtttcaagtgtggtgagaaaggccacaagagtaatgtatgtgatcgagatgagaa 51966  T
Q  225 gaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||| ||||||||| |||| || ||||  |||||  ||||||||    
T  51965 gaagtgctttaggtgtggtaagaaaggacacactttagcttattgcaag 51917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 34 - 269
Target Start/End: Original strand, 4252 - 4487
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    |||||||||||||| || ||||| |||||||| ||||||||||| || ||||||| ||| |||||||||||||| ||||| ||  | |||||||||||||    
T  4252 aaggtgatgagtgaacgtagaggcaagggacaacagagtcgtccgaagccgtacactgctcctgctgacaagggtaagcagagtttaaatgatgagagga 4351  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||| || |||||||||||||||||||| || || || |  |||||||||||||||||||| |||||||||||||||   | |||||||||||| |||||    
T  4352 ggcccaagaggagagatgctcctactgatattgtttgcttcaagtgtggcgagaaaggccaaaagagtaatgtttgtgatagagatgagaagaaatgctt 4451  T
Q  234 caggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||| || ||||  ||||| |||||    
T  4452 caggtgtggtcagaaaggacacacattagctgattg 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 154009 - 153762
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||| |||| | ||||||||||||||||||||||||||| || || || ||||| |||||||||||||| |||||  ||||||    
T  154009 aaagctcattacaaggtgatgggtgaacaaagaggtaagggacagcagagtcgtccgaagccatatagtgctcctgctgacaagggtaagcagcgactga 153910  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||| |||||||| || || |  |||||||| || ||| |||| ||||||||||| |||   | ||||||    
T  153909 atgatgagaggaggcccaagaggagagatgctcccactgagattgtttgcttcaagtgtggtgaaaaaagccataagagtaatgtctgtgatagagatga 153810  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||||||||||||||| || ||||  ||||| |||||    
T  153809 gaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattg 153762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 23370 - 23435
Alignment:
Q  72 tcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggcc 137  Q
    |||||| || || |||||||| |||||||| |||||||| |||||| |||||||||||||||||||    
T  23370 tcgtccaaagccttacagtgctcctgctgataagggaaaacaaagattgaatgatgagaggaggcc 23435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 256
Target Start/End: Original strand, 1274 - 1508
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| || | | |||    
T  1274 aaagctcattacaaggtgatgagtgagaggagaggtaagggacagcagagtcgtcctaagccttacagtgctcctgctgacaagggaaaacagaaaatga 1373  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    ||||||| |||||||| || ||||||||||||||| ||||||| |||||||| |||||||| || |||||||||||||| |||| ||||   | |||||     
T  1374 atgatgataggaggcccaagaggagagatgctcctgctgagattgtctgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtagagatgt 1473  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    || ||| || || ||||||||| ||||||| ||||    
T  1474 gaggaaatgttttaggtgtggttagaagggacaca 1508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 273
Target Start/End: Original strand, 1412 - 1645
Alignment:
Q  40 atgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactgaatgatgagaggaggccg 138  Q
    ||||||||| | || |||||||||||||||| ||||| ||| || |||||||| ||||||||||| |||||||| |||| ||| |||||| ||||||||     
T  1412 atgagtgagaggaggggtaagggacagcagaatcgtcataagccttacagtgctcctgctgacaaaggaaagcagaaga-tgagtgatgataggaggcct 1510  T
Q  139 aataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggt 238  Q
    || ||||||||||||||| ||||||| || ||||| |||||||| |||||||| ||||||||||||||||||   |||||||||| ||||||||||||||    
T  1511 aagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggacacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggt 1610  T
Q  239 gtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||| ||||  ||||| || ||||||    
T  1611 gtggtcagaagggacacagtttagctgaatgcaag 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 663 - 896
Alignment:
Q  15 ggacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaa 114  Q
    ||||| |||||||| ||| |||||||||||||| || |||||||||||||| ||||||||||| || ||||| | ||| |||||||||||||| ||| |     
T  663 ggacaacaaagctcattacaaggtgatgagtgaacgcagaggtaagggacaacagagtcgtccgaagccgtataatgctcctgctgacaagggtaagaag 762  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||  | ||||||||||||||||| || ||||||||||||||||| ||||| || || |  |||||||| || ||||||||||||||||| ||||||   |    
T  763 aggttaaatgatgagaggaggcccaagaggagagatgctcctaccgagattgtttgcttcaagtgtggtgaaaaaggccacaagagtaacgtttgtgata 862  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaa 248  Q
     |||||||||||||||||||||||||||||||||    
T  863 gagatgagaagaagtgcttcaggtgtggtcagaa 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 514134 - 514374
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || || ||||| ||||||||||| |||||| | |    
T  514134 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttaaagtgctcctgctgacaaaggaaagaaga 514233  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| |||||||| || ||||||||||||||| ||||||| || ||||| |||||||| ||||||||||||||||| |||||||||   |    
T  514234 aga-tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggta 514332  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||| |||| ||||||||||||||||||||||||||| ||||    
T  514333 aagacgagaggaagtgcttcaggtgtggtcagaagggacaca 514374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 984 - 744
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || |||||||| ||||||||||| |||||| | |    
T  984 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagtaga 885  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
       ||| |||||| |||||||| || ||||||||||||||| ||||||| || ||||| |||||||| || |||||||||||||| |||||||||   ||    
T  884 agttgattgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaa 785  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  784 agatgagaggaagtgcttcaggtgcggtcagaagggtcaca 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 116141 - 115934
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| |||||||||||||| ||| | |||||||    
T  116141 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagaagagactga 116042  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||||| |||||||||||||| || || ||||  | |||||| || ||||||||||||||||||||||||   | ||||||    
T  116041 atgatgagaggaggcctaagaggagggatgctcctactgatattgtttgtttcatgtgtggtgaaaaaggccacaagagtaatgtttgtgatagagatga 115942  T
Q  222 gaagaagt 229  Q
    ||||||||    
T  115941 gaagaagt 115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 248
Target Start/End: Original strand, 8820 - 9034
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    ||||| |||||||| ||||||||||| ||| |||||||| ||| |||||| || ||||| ||||| |||||||||||||| || ||||||||||||||||    
T  8820 aaggttatgagtgaacgaagaggtaaaggatagcagagttgtcataaaccatatagtgctcctgcagacaagggaaagcagaggctgaatgatgagagga 8919  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||| || |||||||||||| || || |||| || || || |||||||| |||||| |||||||||||||||| |||   || |||||||||||||||||    
T  8920 ggcccaagaggagagatgcttctgctaagattgtttgctacaagtgtggtgagaaaagccacaagagtaatgtctgtgataaggatgagaagaagtgctt 9019  T
Q  234 caggtgtggtcagaa 248  Q
    |||||||||||||||    
T  9020 caggtgtggtcagaa 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 71 - 297
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || ||||| |||||||||||||||||||| || ||||| | ||| |||||||||||||| ||||| ||  | |    
T  71 aaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtaaaatgctcctgctgacaagggtaagcagaggttaa 170  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || || ||||| ||||||||||| || || || |  |||||||||||||||||||||||||||||||| |||   | ||||||    
T  171 atgatgagaggaggcccaagagcagagaggctcctactgatattgtttgcttcaagtgtggcgagaaaggccacaagagtaatgtctgtgatagagatga 270  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||| ||||||||||||    
T  271 gaagaagtgcttcatgtgtggtcagaa 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 42258 - 42001
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||||||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  42258 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 42159  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| |||||||||||||||||||||||||||   |    
T  42158 aga-tgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaa 42060  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  42059 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 42001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 52 - 269
Target Start/End: Complemental strand, 3118 - 2901
Alignment:
Q  52 agaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatg 151  Q
    ||||||||  |||||||||||| |||||||||||| ||||| ||||||||||| ||||| || ||  ||||||||||||||||||| || ||||||||||    
T  3118 agaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatg 3019  T
Q  152 ctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaggg 251  Q
    |||||  |||||| || || || ||||||||  ||||||||||||||||||||||||||   |||||||||||||||| |||||||||||| ||||||||    
T  3018 ctcctgttgagattgtttgctacaagtgtggtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagttcttcaggtgtggacagaaggg 2919  T
Q  252 tcacatgttagcggattg 269  Q
     ||||  ||||| |||||    
T  2918 acacacattagctgattg 2901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 21 - 256
Target Start/End: Original strand, 601 - 836
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| |||||||||||||| |  ||||| ||||||||||| |||||||| || ||||| ||||| ||||| |||||||| ||||| ||  |     
T  601 caaagctcattacaaggtgatgagtgaacatagaggcaagggacagcaaagtcgtccgaagccgtatagtgctcctgccgacaaggggaagcagaggtta 700  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatg 220  Q
    ||||||||||||||||| || ||||||||||||||||| || || |  || |  |||||||| || ||||||||||||||||||||||||   | |||||    
T  701 aatgatgagaggaggcccaagaggagagatgctcctacggacattgattgcttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgatagagatg 800  T
Q  221 agaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    ||||||||||||||||||||||||||||||| ||||    
T  801 agaagaagtgcttcaggtgtggtcagaagggacaca 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 6119 - 5868
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| || |  ||||    
T  6119 aaagctcattataaagtgatgagtgagcgcagaggtaagggtcagcagagtcgtccgaaaccgtatagtgctcctgctgacaaaggaaaacagatgctga 6020  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| |  ||||||||||| |||| |||||  |||| ||  |||||||| ||||||||||||||||||||||| |||     |||| |    
T  6019 atgatgagaggaggcctaggaggagagatgcccctaatgagactgtctatttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgattgagataa 5920  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||| ||||| ||||| ||||| || ||||  ||||| |||||||||    
T  5919 gaagaagtgtttcagatgtggacagaaaggacacacattagctgattgcaag 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 4091 - 4342
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||| ||||||||||| || || || ||  |||    
T  4091 aaagctcattataaagtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggttga 4190  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || |||||||||||||||||||||||  | || |  |||||||| ||||||| | |||| |||||||| |||     ||||||    
T  4191 atgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtggtgagaaagactacaaaagtaatgtgtgtgatcgagatga 4290  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||||||| |||||||||||||| || ||||  || || |||||||||    
T  4291 gaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaag 4342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 23704 - 23961
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||| ||| ||||||| | ||||||||| | || ||||||||||| |||||||||||||| || |||||||| ||||||||||| |||||||| |    
T  23704 gacaccaaaactcattataagattatgagtgagaggaggggtaagggacaacagagtcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 23803  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||||||| || |||||||||||||||  |||||| || || || |||||||| ||||||||||||||||||||||| |||   |    
T  23804 aga-tgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgatacaagtgtggtgagaaaggccacaagagtaatgtatgtggaa 23902  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
     |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  23903 gagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 23961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 329 - 555
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||| | || ||||||||||||||||| |||||||| || ||||| ||||| ||| |||||||||| ||||| ||  | |    
T  329 aaagctcattacaaggtgatgagtaaacgtagaggtaagggacagcacagtcgtccgaagccgtatagtgctccttctgacaagggtaagcagaggttaa 428  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||| ||||| || ||||||||||||||||  || || || ||||  ||||||||||||||||||||||| |||| |||||||   | ||||||    
T  429 atgatgagagaaggcccaagaggagagatgctcctatagatattgtttgtttcaagtgtggcgagaaaggccacaaaagtagtgtttgtgatacagatga 528  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||||||||||||||||||    
T  529 gaagaagtgcttcaggtgtggtcagaa 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 269
Target Start/End: Complemental strand, 5942 - 5710
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    ||||||||||||||||| |||||||||||||| || |||||||| || ||||| ||   ||||||||||||||| ||||| ||| |||||||||||||||    
T  5942 aaggtgatgagtgagcgcagaggtaagggacaacatagtcgtccgaagccgtatag---ccctgctgacaagggtaagcagagattgaatgatgagagga 5846  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||  || |||||||||||||||||||||||| | || |  |||||||| |||||||||||||||||||| || |||     ||||||||||||||||||    
T  5845 ggcttaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaaggccacaagagtaacgtgtgtgatcgagatgagaagaagtgctt 5746  T
Q  234 caggtgtggtcagaagggtcacatgttagcggattg 269  Q
     |||||||||||||| || ||||  ||||| |||||    
T  5745 taggtgtggtcagaaaggacacactttagctgattg 5710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 11524 - 11764
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||| ||| | ||||||||| |||||||| |    
T  11524 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacattgctcttgctgacaaaggaaagcaga 11623  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| ||  |||||| |||| ||| || ||||||||||| ||   |||||| || || || ||||||||  |||||||||||||||||||||| |||   |    
T  11624 aga-tgggtgatgataggaagcccaagaggagagatgcaccagatgagattgtatgatacaagtgtggtaagaaaggccacaagagtaatgtatgtggaa 11722  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
     |||||| | ||||||||||||||||||||||||||||||||    
T  11723 gagatgataggaagtgcttcaggtgtggtcagaagggtcaca 11764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 33153 - 33337
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| || |    
T  33153 gacaccaaagctcattacaaggtgatgagtgagcgaaggggtaagggacagcagagtcgtcctaaaccatacagtgctcctgctgacaaaggaaaacaga 33252  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagag 200  Q
    |  ||||||||||||||||||| || |||||||||||||||  ||| || || ||||  |||||||| || ||||||||||||||    
T  33253 ggatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaaggccacaagag 33337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 273
Target Start/End: Complemental strand, 6321 - 6071
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||| |||||||||||||| || ||||| |||||||||||||||||||| || ||||| ||||| ||| |||||||||| |||||| |  | |    
T  6321 aaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctactgacaagggtaagcaaggt-taa 6223  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||||||||||||| |||||| || || || |  |||||||| || |||||||||||||||||||| |||   | ||||||    
T  6222 atgatgagaggaggcccaagaggagagatgctcttactgacattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatga 6123  T
Q  222 gaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||| ||||||||||| || ||||   |||| |||||||||    
T  6122 gaagaagtgcttcagatgtggtcagaaaggacacacactagctgattgcaag 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 164
Target Start/End: Complemental strand, 3382 - 3240
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||| || ||||| |||||||||||||||||||| ||||| ||| |||    
T  3382 aaagctcattataaggtgatgagtgagcgcagaggcaagggacaacagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagagattga 3283  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagat 164  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  3282 atgatgagaggaggcccaagaggagagatgctcctactgagat 3240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 373 - 320
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaa 110  Q
    |||||| ||||||||||  ||||| || ||||||||||||||||| ||||||||    
T  373 taagggtcagcagagtctccctaagccttacagtgcccctgctgataagggaaa 320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 93 - 269
Target Start/End: Original strand, 63377 - 63553
Alignment:
Q  93 ccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggc 192  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||| || || ||||  |||||||| || ||||||    
T  63377 ccctgctgacaagggtaagcaaagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgataaaggc 63476  T
Q  193 cacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    ||||||||||||||||||  |  ||||||||||||||| ||||||||||||||||| || ||||  ||||| |||||    
T  63477 cacaagagtaatgtttgtgaccgagatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagctgattg 63553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 63326 - 63377
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtc 73  Q
    ||||||| ||| ||||||||||||||||| ||||| |||| |||||||||||    
T  63326 aaagctcattacaaggtgatgagtgagcgtagaggcaaggtacagcagagtc 63377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 11500 - 11265
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||| ||||||| ||||||||| || || ||||| ||||||||||| |||||||| |    
T  11500 gacaccaaagctcattacaagataatgagtgagaggaggggtaagggtcagcagattcgtcctaagccttatagtgctcctgctgacaaaggaaagcaga 11401  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
       |||||||||| ||||| || || ||||||||||||||| ||||||| || ||||| |||||||| || |||||||||||||| |||| ||||   |     
T  11400 ttttgaatgatgataggagtcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgcttgtggtag 11301  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaaggg 251  Q
    |||||||| |||||||||||||||||||||||||||    
T  11300 agatgagaggaagtgcttcaggtgtggtcagaaggg 11265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 269
Target Start/End: Original strand, 43218 - 43453
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||| ||| ||||| ||| || |||| || || || || ||||||||||||||||    
T  43218 aaggtgatgagtgagcgcagaggtaagggacaacagagtcgtccaaaactgtatagtgctccttctaacaaaggtaaacagaggctgaatgatgagagga 43317  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||| || |||||||||||||||| |||||| |||||||  |||||| | || || ||||||||||||||||| |||     ||||||||||||||||||    
T  43318 ggcctaagaggagagatgctcctaatgagattgtctgtttcaagtgtcgtgaaaagggccacaagagtaatgtgtgtgatcgagatgagaagaagtgctt 43417  T
Q  234 caggtgtggtcagaagggtcacatgttagcggattg 269  Q
     |||||||| ||||| || ||||  ||||| |||||    
T  43418 taggtgtggacagaaaggacacactttagctgattg 43453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 55 - 256
Target Start/End: Original strand, 623 - 824
Alignment:
Q  55 ggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactgaatgatgagaggaggccgaataggagagatgct 153  Q
    |||||||||||||||| ||||||||| || |||||||| |||  |||||| |||||||| |||| |||||||||| |||||||| || ||||||||||||    
T  623 ggtaagggacagcagaatcgtcctaagccttacagtgctcctattgacaaaggaaagcagaaga-tgaatgatgataggaggcctaagaggagagatgct 721  T
Q  154 cctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtc 253  Q
    ||| ||||||| || ||||| |||| ||| ||||||||||||||||| |||||||||   ||||| |||| ||||||||||||||||||||| ||||| |    
T  722 ccttctgagattgtttgttacaagtttggtgagaaaggccacaagagcaatgtttgtggtaaagacgagaggaagtgcttcaggtgtggtcaaaagggac 821  T
Q  254 aca 256  Q
    |||    
T  822 aca 824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 34 - 248
Target Start/End: Original strand, 671 - 885
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    ||||||||||||||  | |||||||||||||| ||||||||||| || || || ||| | |||||||||||||| |||||  ||||||||||||||||||    
T  671 aaggtgatgagtgaatgtagaggtaagggacaacagagtcgtccgaagccatatagtactcctgctgacaagggtaagcagcgactgaatgatgagagga 770  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||| || ||||||||||||||||  || || || || |  |||||||| || |||||||||||||||||||| |||   | ||||||||||||||||||    
T  771 ggcccaagaggagagatgctcctatggatattgtttgcttcaagtgtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgctt 870  T
Q  234 caggtgtggtcagaa 248  Q
    || ||||||||||||    
T  871 catgtgtggtcagaa 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 2236 - 2011
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactga 121  Q
    ||||||| |||||| |||||||||||||| |||||||||||| || |||||||||| |||||||  |||||  |||||||||| || || || || ||||    
T  2236 aaagctcattataaagtgatgagtgagcgcagaggtaagggatagtagagtcgtccgaaaccgtt-agtgcttctgctgacaaaggtaaacagaggctga 2138  T
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatga 221  Q
    |||||||||||||||| || ||| |||||||||||||||| ||  | || |  |||||||| ||||||||||||||||||||||| |||  |  ||||||    
T  2137 atgatgagaggaggcctaagaggtgagatgctcctactgaaattatttgcttcaagtgtggtgagaaaggccacaagagtaatgtgtgtgaccgagatga 2038  T
Q  222 gaagaagtgcttcaggtgtggtcagaa 248  Q
    |||||||||||| |||||||| |||||    
T  2037 gaagaagtgctttaggtgtggacagaa 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 1085 - 1305
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||| | ||||||||| | || || ||||||||| ||| ||||||||| || |||||||| ||||||||||| |||||||| |    
T  1085 gacaccaaagctcattacaagataatgagtgagaggaggggaaagggacagaagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 1184  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| ||||| || || ||||||||||||||| ||||||| || ||||| |||||||| ||||||||||||||||| |||||||||   |    
T  1185 aga-tgaatgatgataggagacccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggta 1283  T
Q  215 aagatgagaagaagtgcttcag 236  Q
     |||||||| ||||||||||||    
T  1284 gagatgagaggaagtgcttcag 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 248
Target Start/End: Original strand, 12213 - 12425
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    |||||||||||||| || ||||| |||||| |||| |||||||| || ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |    
T  12213 aaggtgatgagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagta 12312  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||| || ||||||||||    ||   ||  ||  || |  |||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||    
T  12313 ggcccaagaggagagatgagggtaagtag--agattgcttcaagtgtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtgctt 12410  T
Q  234 caggtgtggtcagaa 248  Q
     ||||||| ||||||    
T  12411 taggtgtgctcagaa 12425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 34 - 248
Target Start/End: Original strand, 20393 - 20605
Alignment:
Q  34 aaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagagga 133  Q
    |||||||||||||| || ||||| |||||| |||| |||||||| || ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |    
T  20393 aaggtgatgagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagta 20492  T
Q  134 ggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgctt 233  Q
    |||| || ||||||||||    ||   ||  ||  || |  |||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||    
T  20493 ggcccaagaggagagatgagggtaagtag--agattgcttcaagtgtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtgctt 20590  T
Q  234 caggtgtggtcagaa 248  Q
     ||||||| ||||||    
T  20591 taggtgtgctcagaa 20605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 145 - 273
Target Start/End: Original strand, 764 - 892
Alignment:
Q  145 agagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtc 244  Q
    |||||||||||| ||||||| || ||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  764 agagatgctcctgctgagattgtttgttacaagtgtggcaagaaaggccataagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtc 863  T
Q  245 agaagggtcacatgttagcggattgcaag 273  Q
    |||| || ||||   |||| |||||||||    
T  864 agaaaggacacactctagctgattgcaag 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 3838 - 3920
Alignment:
Q  22 aaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||| ||| |||||||||||||| |||||  | || ||||||||||||||||| || ||||| ||||| |||||||||||    
T  3838 aaagctcattacaaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaa 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 66889 - 67129
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaa 115  Q
    |||| |||||||| ||| ||| | ||||||||| | || || ||||||||||||| ||||||||| || |||||||| |||| |||||| |||||| | |    
T  66889 gacaccaaagctcattacaagataatgagtgagaggaggggcaagggacagcagaatcgtcctaagccttacagtgctcctgttgacaaaggaaagtaga 66988  T
Q  116 gactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaa 215  Q
       |||||||||| ||||| || || ||||||||||||||| | ||||| || |||||||||||||| || |||||||||||||| |||||||||   |     
T  66989 tgatgaatgatgataggagacccaagaggagagatgctccttccgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggtag 67088  T
Q  216 agatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
    | |||||| ||| || |||||||||||||| ||||| ||||    
T  67089 acatgagaggaaatgtttcaggtgtggtcaaaagggacaca 67129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 657 - 775
Alignment:
Q  32 ataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagag 131  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||  | |||||||||||||||||    
T  657 ataaggtgatgagtgagtgtagaggtaagggacagcagagtcgtccgaaaccgtacagtgctcctgctgacaaaggtaaatagagactgaatgatgagag 756  T
Q  132 gaggccgaataggagagat 150  Q
    |||||| || |||||||||    
T  757 gaggcctaagaggagagat 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 210
Target Start/End: Original strand, 30131 - 30301
Alignment:
Q  40 atgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-aagactgaatgatgagaggaggccg 138  Q
    ||||||||| | || ||||||||| | |||| |||||||||||| |||||||| ||||||||||| || || || |||| |||||||||| ||||||||     
T  30131 atgagtgagaggaggggtaagggataacagaatcgtcctaaaccttacagtgctcctgctgacaaagggaaacagaaga-tgaatgatgacaggaggccc 30229  T
Q  139 aataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    || |||| |||||||||| ||||||| || |||||||||||||| || |||||||||||||| |||| ||||    
T  30230 aagaggaaagatgctcctgctgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgcttgt 30301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 16395 - 16584
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||| ||||| ||||||||||| || |||||| | |||||||||||||| || || || ||||| |||||||| || || ||||||||  ||    
T  16395 caaagctcattacaaggttatgagtgagcggaggggtaagagtcagcagagtcgtccaaagccttatagtgctcctgctgataaaggtaagcaaagggtg 16494  T
Q  121 aatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||||||||||| |  | || |||| ||||| ||||| | || || || |||||||| ||||| |||||||||||||||| ||||    
T  16495 aatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgt 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 252142 - 251910
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca-a 114  Q
    |||| |||||||| ||| ||||||||||||||| | || ||||||||||| || | |||||||||||| |||||||| ||||||| ||  ||||| || |    
T  252142 gacaccaaagctcattacaaggtgatgagtgagaggaggggtaagggacaacataatcgtcctaaaccttacagtgctcctgctgccacaggaaaacata 252043  T
Q  115 agactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtacca 214  Q
    ||| |||||||||| |||||||| || ||||||||||||| |  |||||| || ||||  |||||||| || ||||||||||| ||  ||| ||||   |    
T  252042 aga-tgaatgatgataggaggcccaagaggagagatgctcttgttgagattgtgtgtttcaagtgtggtgaaaaaggccacaaaagctatgcttgtggta 251944  T
Q  215 aagatgagaagaagtgcttcaggtgtggtcagaa 248  Q
     |||||||| ||| || || ||||||||||||||    
T  251943 gagatgagaggaaatgttttaggtgtggtcagaa 251910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 229681 - 229827
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| ||| |||| |||| ||  ||||||||| | ||||    
T  229681 cagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaataagaaggatgctcctgcggaga 229780  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || ||||  || ||||| ||||||||||||||||| |||||||||    
T  229781 ttgtttgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 229827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 1693 - 1839
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||| || || |||||||| |||||||| |||||||| |||||| | ||||||||||||||||| |  | || ||||||||||| |||||    
T  1693 cagcagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagaggaggcctagaaagaaagatgctcctaatgaga 1792  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || |||   ||||||||||||||||| |||||||||| ||||    
T  1793 ttgtgtgctatgcttgtggcgagaaaggccataagagtaatgcttgt 1839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 4557 - 4703
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||| || || |||||||| |||||||| |||||||| |||||| | ||||||||||||||||| |  | || ||||||||||| |||||    
T  4557 cagcagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagaggaggcctagaaagaaagatgctcctaatgaga 4656  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || |||   ||||||||||||||||| |||||||||| ||||    
T  4657 ttgtgtgctatgcttgtggcgagaaaggccataagagtaatgcttgt 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 3728 - 3863
Alignment:
Q  71 gtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctg 170  Q
    |||||||||| || || ||||| |||||||||||||| || |||||| |||||||||||||||| || || |||||||||| | ||  |||||| || ||    
T  3728 gtcgtcctaagccctatagtgctcctgctgacaaggggaaacaaagattgaatgatgagaggagacctaagaggagagatgtttctgttgagattgtttg 3827  T
Q  171 ttataagtgtggcgagaaaggccacaagagtaatgt 206  Q
     || |||||||||||||  |||||||||||||||||    
T  3828 ctacaagtgtggcgagaggggccacaagagtaatgt 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 7722 - 7754
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||| |||||||||||||||||||||||||    
T  7722 tgtggcgggaaaggccacaagagtaatgtttgt 7754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 12161 - 12063
Alignment:
Q  175 aagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    |||||||| |||||||||||||||||||||||||||   | |||||| | ||||||||||||||||||||||||||||||||  ||||| || ||||||    
T  12161 aagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaag 12063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 57443 - 57589
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||| |||||||| || || |||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| |  | || ||||||||||  |||||    
T  57443 cagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgaga 57542  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || |  ||||  ||||||||||||||||| |||||||||| ||||    
T  57543 ttgtttactatacttgtggcgagaaaggccataagagtaatgcttgt 57589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 4982 - 5158
Alignment:
Q  72 tcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgt 171  Q
    |||||||||||| |||||||| ||||||||||| || ||||| ||  |||||||||| |||||||| || ||||||||||||||| |||| || || |||    
T  4982 tcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgt 5081  T
Q  172 tataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaa 248  Q
    || ||| |||  || ||||||||||| |  |||| ||||   | | |||||| ||| || |||||||||||||||||    
T  5082 taaaagagtgatgaaaaaggccacaaaaacaatgcttgtggtagaaatgagaggaaatgtttcaggtgtggtcagaa 5158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 7348 - 7202
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||| ||||| || || || |||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| |  | || ||||||||||  |||||    
T  7348 cagcaaagtcgaccaaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgaga 7249  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || ||||  ||||| ||||||||||| |||||||||| ||||    
T  7248 ttgtttgctatacttgtggtgagaaaggccataagagtaatgcttgt 7202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 14478 - 14332
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||| ||||| || || || |||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| |  | || ||||||||||  |||||    
T  14478 cagcaaagtcgaccaaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgaga 14379  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || || ||||  ||||| ||||||||||| |||||||||| ||||    
T  14378 ttgtttgctatacttgtggtgagaaaggccataagagtaatgcttgt 14332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 1368 - 1269
Alignment:
Q  110 agcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttg 209  Q
    |||| ||| |||||||||||||||| || || || || |||| |||||||||||| || ||||| |||||||| ||||| ||||||||||||||||||||    
T  1368 agcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttg 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 8071 - 7908
Alignment:
Q  25 gctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatg 124  Q
    |||| ||||||||| | ||||||||| ||    ||||| |||||  ||||||| || || |||||||| |||| |||||| ||| |||| ||| ||||||    
T  8071 gctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgttgacaaaggagagcagagattgaatg 7972  T
Q  125 atgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaa 188  Q
    |||||||||| || || || || |||| |||||||||||| || ||||| |||||||| |||||    
T  7971 atgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaa 7908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 12421 - 12322
Alignment:
Q  62 gacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactga 161  Q
    |||||||||||||||| ||| |||| ||||| ||||||||||| |  || || || ||||||||||||||||||||  | ||||||||||||||||||||    
T  12421 gacagcagagtcgtccgaaatcgtatagtgctcctgctgacaaagataaacagaggctgaatgatgagaggaggccttagaggagagatgctcctactga 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 48205 - 48059
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||||||||| || |||||||| |||||||| ||||| || || ||| ||  |||||||||| | || |  | || ||||||||||  |||||    
T  48205 cagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgaga 48106  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  48105 ttgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgt 48059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 55300 - 55441
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||||||  | |||||||| |||||||| ||||| || || ||| ||  |||||||||| | || |  | || ||||||||||  |||||    
T  55300 cagcagagtcgtcctaagacttacagtgctcctgctgataagggtaaacagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgaga 55399  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatg 205  Q
    | ||||| ||||  ||||| ||||||||||||||||||||||    
T  55400 ttgtctgctatacttgtggtgagaaaggccacaagagtaatg 55441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 13835 - 13932
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca 113  Q
    |||| |||||||| ||| ||| | ||||||||| | || |||||||||||||||| ||||||||| || |||||||| ||||||||||| ||||||||    
T  13835 gacaccaaagctcattaaaagataatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagca 13932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 14863 - 15016
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| |||  ||| || | ||  |||||||||    
T  14863 taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcagcctaagaagaaggatgctcct 14962  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    || ||||| ||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  14963 acggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 15016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 11269 - 11331
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  11269 gatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 11331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 32361 - 32208
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || || |||| |||||| ||||| || |||||| ||   ||||| ||| |||| || | ||  |||||||||    
T  32361 taagggccagcagagtcgccctaagccctatagcgcccttgctgataagggcaaacaaagaatggtcgatgataggcggcctaagaagaaggatgctcct 32262  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     ||||||| ||||||| ||| ||||||||||||||||||||||| |||| ||||    
T  32261 gctgagattgtctgttttaattgtggcgagaaaggccacaagagcaatgcttgt 32208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 17642 - 17489
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  17642 taagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacatagaatggtcgatgataggcggcctaagaagaaggatgctcct 17543  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     | ||||| |||||||  || ||||| |||||||||||||||||||||||||||    
T  17542 gcggagattgtctgtttcaattgtggtgagaaaggccacaagagtaatgtttgt 17489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 3902 - 3859
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  3902 aagggacagcagagtcgtcctaagccgtacagtgcccccgctga 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 303 - 455
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| ||||||||||| ||||| || || | |||||||||||| ||||| || |||||| ||   ||||| ||| |||| || | ||  ||||||||||    
T  303 aagggccagcagagtcgccctaagccttatattgcccctgctgataagggcaaacaaagaatggtcgatgataggcggcctaagaagaaggatgctccta 402  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| || ||||  || ||||||||||||||||||||||| |||||||||    
T  403 cggagattgtttgtttcaattgtggcgagaaaggccacaagagcaatgtttgt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 36980 - 36764
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| ||||||||||  ||||| || || |||||||||||||| ||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  36980 taagggccagcagagtctccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcct 36881  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcaca 256  Q
     | ||||| |||||||  || ||||| ||||||||||||||||| ||||||||| |  | || | |||||| || ||| |||||||  |||||||||| |    
T  36880 gcggagatcgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgtccagaggaggtgaagaaatgtttccggtgtggcaagaagggtcata 36781  T
Q  257 tgttagcggattgcaag 273  Q
     |||||| |||||||||    
T  36780 cgttagctgattgcaag 36764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 26819 - 26679
Alignment:
Q  72 tcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgt 171  Q
    |||||| || || |||||||| |||||||  ||||| ||||||||| ||||||||||||||||||| |  | || |||| || || ||||| | || ||     
T  26819 tcgtccaaagccttacagtgctcctgctggtaagggtaagcaaagagtgaatgatgagaggaggcctagaaagaaagatactactgctgaggttgtttgc 26720  T
Q  172 tataagtgtggcgagaaaggccacaagagtaatgtttgtac 212  Q
    ||||  ||||| |||||||||||||||||||||| ||||||    
T  26719 tatacttgtggtgagaaaggccacaagagtaatgcttgtac 26679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 36733 - 36795
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| ||||||| ||||||| ||| ||||||||||||||||| ||||| |||| ||||    
T  36733 gatgctcctgctgagattgtctgttttaattgtggcgagaaaggccataagagcaatgcttgt 36795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 36641 - 36701
Alignment:
Q  56 gtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaag 116  Q
    ||||||| ||||||||||| ||||| || || |||||||||||||| ||||| || |||||    
T  36641 gtaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacaaag 36701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 9204 - 9328
Alignment:
Q  88 agtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgaga 187  Q
    ||||| |||||||| ||||| || |||||| ||||||||||||||||||| |  | || |||| || |||||||||| || || ||||  ||||| ||||    
T  9204 agtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcctagaaagaaagatactactactgagattgtttgctatacttgtggtgaga 9303  T
Q  188 aaggccacaagagtaatgtttgtac 212  Q
    | |||||||||||||||| ||||||    
T  9304 agggccacaagagtaatgcttgtac 9328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 23135 - 23274
Alignment:
Q  72 tcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgt 171  Q
    ||||||||| || |||||||| |||||||| ||||| || || ||| ||||||||||||| ||||| |  | || |||  || || ||||| | || |||    
T  23135 tcgtcctaagccttacagtgctcctgctgataagggtaaacagagattgaatgatgagagaaggcctagaaagaaagagactactgctgaggttgtttgt 23234  T
Q  172 tataagtgtggcgagaaaggccacaagagtaatgtttgta 211  Q
    ||||  | ||| ||||||||||| |||||||||| |||||    
T  23235 tatacttttggtgagaaaggccataagagtaatgcttgta 23274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 104701 - 104561
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||| || || || ||||| |||||||| |||||||| || ||| ||| |||||||||| |||| |  | || ||||||||||  |||||    
T  104701 cagcagagtcgtccaaagccttatagtgctcctgctgataagggaaaacagagaatgattgatgagaggcggcctagaaagaaagatgctcctgttgaga 104602  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaat 204  Q
    | || || ||||  ||||| |||||||||||||||||||||    
T  104601 ttgtttgctatacttgtggtgagaaaggccacaagagtaat 104561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 93 - 20
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggcc 137  Q
    ||||| |||||||| || || |||||||| |||||||| ||||| ||||||||| |||||||||||||||||||    
T  93 cagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcc 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 270 - 117
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| | ||||||||| ||||| || || |||||||||||||| |||||||| || ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  270 taagggccggcagagtcgccctaagccctatagtgcccctgctgataagggaaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcct 171  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     | ||||| |||||||  || ||||| ||||||||||||||||| |||||||||    
T  170 gcagagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 30409 - 30336
Alignment:
Q  40 atgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagca 113  Q
    ||||||||| | || || ||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||    
T  30409 atgagtgagaggaggggcaagggacagcagagtcgtcctaagccttacagtgctcctgctgacaaaggaaagca 30336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 30325 - 30225
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcaga 247  Q
    ||||||| | || |||| || ||||| |||||||| |||||||||||||| || || ||||||   | |||||||| |||||| ||||||||||||||||    
T  30325 gatgctctttctaagattgtttgttacaagtgtggtgagaaaggccacaaaagcaacgtttgtggtagagatgagaggaagtgattcaggtgtggtcaga 30226  T
Q  248 a 248  Q
    |    
T  30225 a 30225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 210
Target Start/End: Original strand, 40330 - 40482
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| || |||||||||||||| || ||||||||||||||||| |||||||| || ||| ||  |||||| ||| | ||||  | || ||||||||||     
T  40330 aagggtcaacagagtcgtcctaagccttacagtgcccctgctgataagggaaaacagagagtggttgatgataggcgcccgagaaagaaagatgctcctg 40429  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||| |  |  ||||  ||||| ||||||||||||||||| |||| ||||    
T  40430 ctgagattgaattctatacttgtggtgagaaaggccacaagagcaatgcttgt 40482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 17762 - 17686
Alignment:
Q  16 gacatcaaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgc 92  Q
    |||| |||||||| ||||||| | ||||||||| | || |||||||||||||||||||||||||| || ||||||||    
T  17762 gacaccaaagctcattataagataatgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacagtgc 17686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 18314 - 18174
Alignment:
Q  70 agtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtct 169  Q
    |||||||| || || |||| ||| |||||||| ||||| ||||||||| | ||||||||||||||||| |  | || ||||||| || ||||||| || |    
T  18314 agtcgtccaaagccttacaatgctcctgctgataagggtaagcaaagagttaatgatgagaggaggccaagaaagaaagatgctactgctgagattgttt 18215  T
Q  170 gttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || |  ||||| ||||||||||| |||||||||| ||||    
T  18214 gctacacttgtggtgagaaaggccataagagtaatgcttgt 18174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 110736 - 110882
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||| |||||||| ||  ||||||| ||||| || ||||| ||||| ||| ||  |||||||||| | || |  | || ||||||||||  |||||    
T  110736 cagcagagccgtcctaagcctcacagtgctcctgccgataaggggaagcagagaatggttgatgagaggcgccctagaaagaaagatgctcctgttgaga 110835  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| ||||  ||||| |||||||||||||||||||||| ||||    
T  110836 ttgtctgctatacttgtggtgagaaaggccacaagagtaatgcttgt 110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 10846 - 10803
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10846 aagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 13326 - 13449
Alignment:
Q  87 cagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgag 186  Q
    |||||| |||||||| ||||| ||||||||| ||||||||||||||||||| |  | || ||||| |  ||||||||| || || || |  ||||| |||    
T  13326 cagtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcctagaaagaaagatgttgttactgagattgtttgctacacttgtggtgag 13425  T
Q  187 aaaggccacaagagtaatgtttgt 210  Q
    |||||||| |||||||||| ||||    
T  13426 aaaggccataagagtaatgcttgt 13449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 354 - 208
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||| |||||||| || ||||||||||| || ||||| ||||| ||| ||   ||||| |||| ||| || | ||  ||||||||| | || |    
T  354 cagcagagtcgccctaaaccttatagtgcccctgcagataagggcaagcagagaatggtcgatgataggaagccaaagaagaaggatgctcctgcggata 255  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || ||||  || ||||||| |||||||||||||||||||||||||    
T  254 ttgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 4384 - 4530
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||||||||| || |||||||| |||||||| ||||  || || ||| ||  |||||| ||| |||| || | || ||||||||||   ||||    
T  4384 cagcagagtcgtcctaagccttacagtgctcctgctgataaggataaacagagaatggttgatgataggcggcctaagaagaaagatgctcctgtggaga 4483  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| ||||  ||||| || ||||||||||||||||||| ||||    
T  4484 ttgtctgctatacttgtggtgaaaaaggccacaagagtaatgcttgt 4530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 210
Target Start/End: Original strand, 12953 - 13099
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||| |||||||| || ||||||||||| || ||||| ||||| ||| ||   ||||| |||| ||| || | ||  ||||||||| | || |    
T  12953 cagcagagtcgccctaaaccttatagtgcccctgcagataagggcaagcagagaatggtcgatgataggaagccaaagaagaaggatgctcctgcggata 13052  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || ||||  || ||||||| |||||||||||||||||||||||||    
T  13053 ttgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 13099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 13854 - 14007
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcct 156  Q
    |||||| || |||||||| ||||| || || |||||||||| ||| ||||| || || ||| ||   ||||| ||| |||| || | ||  |||||||||    
T  13854 taagggccaacagagtcgccctaagccctatagtgcccctgatgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcct 13953  T
Q  157 actgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     | ||||| ||||||| ||| ||||| ||||||||||||||||| |||||||||    
T  13954 gcggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 14007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 36245 - 36156
Alignment:
Q  122 atgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgta 211  Q
    ||||||||||||| || || || |||||||| |||||| |||| || || || | |||||| ||||||||||||||||||||||| ||||    
T  36245 atgatgagaggagacctaagagaagagatgcccctactaagattgtttgctacaggtgtggtgagaaaggccacaagagtaatgtctgta 36156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 564 - 468
Alignment:
Q  41 tgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggcc 137  Q
    |||||||| | | ||||||||| ||||| ||||| || || || ||||| || |||||||| ||||| || |||||| |||||||||||||||||||    
T  564 tgagtgagaggaaaggtaagggtcagcaaagtcgcccaaagccttacagcgctcctgctgataagggtaaacaaagagtgaatgatgagaggaggcc 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 2470 - 2318
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctccta 157  Q
    ||||| || |||||||||||||| || |||||||||| |||||| ||||||||  | ||| ||  |||||| ||  | || || | || ||||| |||||    
T  2470 aagggtcaacagagtcgtcctaagccttacagtgcccttgctgataagggaaaatagagaatggttgatgatagacgccctaagaagaaagatgttccta 2371  T
Q  158 ctgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||| || || ||||  ||||| ||||||||||||||||| |||| ||||    
T  2370 ctgagattgtgtgctatacttgtggtgagaaaggccacaagagcaatgcttgt 2318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 30887 - 30983
Alignment:
Q  109 aagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatg 205  Q
    ||||||| | ||||||||||||||||  | || || ||||||| |||| ||||||| || || || |||||||| ||||| ||||||||||||||||    
T  30887 aagcaaatattgaatgatgagaggagaactaagagaagagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 30983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 504 - 445
Alignment:
Q  149 atgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgttt 208  Q
    |||||||| ||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||    
T  504 atgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgttt 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 11930 - 11891
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctg 97  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  11930 aagggacagcagagtcgtcctaagccgtacagtgcccctg 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 21458 - 21419
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctg 97  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21458 aagggacagcagagtcgtcctaagccgtacagtgcccctg 21419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 55479 - 55439
Alignment:
Q  61 ggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  55479 ggacaacagagtcgtcctaagccgtacagtgcccctgctga 55439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 49143 - 49100
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  49143 aagggacagcagagtcgtcctaaaccgtacaatgcccctactga 49100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 254
Target Start/End: Complemental strand, 1707 - 1565
Alignment:
Q  112 caaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgta 211  Q
    |||||| ||||||||||||||  ||| ||  ||||| ||||||||  |||  | || ||||| || ||||| |  || |||||||||||||||| ||| |    
T  1707 caaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtgttaagggccacaagagtaatgcttgca 1608  T
Q  212 ccaaagatgagaagaagtgcttcaggtgtggtcagaagggtca 254  Q
    || ||||||||||||| || ||||| || |||||||| |||||    
T  1607 cccaagatgagaagaaatgtttcagatgcggtcagaatggtca 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 10094 - 9948
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    ||||||||||||||||| || |||||||| |||||| | ||||| || |||||| ||  |||||||||| | || |  | || ||||||||||   ||||    
T  10094 cagcagagtcgtcctaagccttacagtgctcctgctaataagggtaaacaaagaatggttgatgagaggcgccctaggaagaaagatgctcctgtcgaga 9995  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | || |||| ||  ||||| ||||||||||| |||||||||| ||||    
T  9994 ttgtatgttgtacttgtggtgagaaaggccataagagtaatgcttgt 9948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 10071 - 10133
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||||| ||||| |||||||  || ||||| ||||||||||||||||| |||||||||    
T  10071 gatgctcctacggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 10133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 395 - 253
Alignment:
Q  68 agagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagt 167  Q
    ||||||||||||| |||||||||||||||||||| ||||| || || ||| ||   || || ||  |||| || | ||  |||| |||| ||||||| ||    
T  395 agagtcgtcctaagccgtacagtgcccctgctgataagggcaaacagagaatggtcgaggatagacggcctaagaagaaggatgttcctgctgagattgt 296  T
Q  168 ctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||| | ||| ||||| ||||||||||||||||| |||| ||||    
T  295 ctgctttaattgtggtgagaaaggccacaagagcaatgcttgt 253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 4026 - 3880
Alignment:
Q  64 cagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgaga 163  Q
    |||||||||||||||||  | |||||||| |||||||| ||||| || || ||| ||  |||||| ||| |||| || | || |||||||||| |||| |    
T  4026 cagcagagtcgtcctaagtcttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcggcctaagaagaaagatgctcctgctgaaa 3927  T
Q  164 tagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||| ||||  | ||| | ||||| |||||||||||||| ||||    
T  3926 ttgtctgctatacttatggtgtgaaagaccacaagagtaatgcttgt 3880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 22721 - 22679
Alignment:
Q  62 gacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  22721 gacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 22679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 7710 - 7668
Alignment:
Q  62 gacagcagagtcgtcctaaaccgtacagtgcccctgctgacaa 104  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  7710 gacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 7668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 210
Target Start/End: Original strand, 17807 - 17952
Alignment:
Q  65 agcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagat 164  Q
    |||||||||||||||| || |||||||| |||||||| ||||| ||  | ||| ||  |||||||||| | || |  | || ||||||| ||  ||||||    
T  17807 agcagagtcgtcctaagccttacagtgctcctgctgataagggtaaatagagaatggttgatgagaggcgccctagaaagaaagatgcttctgttgagat 17906  T
Q  165 agtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
     ||||  |||   ||||| |||||||||||||||||||||||||||    
T  17907 tgtctactattcttgtggtgagaaaggccacaagagtaatgtttgt 17952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 2517 - 2404
Alignment:
Q  21 caaagctcgttataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactg 120  Q
    |||||||| ||||||| | |||| |||||| || ||||||    || ||||||||||||| || |||||||| || ||||| ||||| ||||| ||  ||    
T  2517 caaagctcattataagatcatgaatgagcggaggggtaagaactagtagagtcgtcctaagccttacagtgctccggctgataagggtaagcagagggtg 2418  T
Q  121 aatgatgagaggag 134  Q
    ||||||||||||||    
T  2417 aatgatgagaggag 2404  T

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Target: scaffold0333 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 19119 - 18979
Alignment:
Q  70 agtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctactgagatagtct 169  Q
    ||||||||||| || |||||||| |||||||| ||||| || || ||| ||  |||||| ||| | || || | || ||| ||||||  ||| || ||||    
T  19119 agtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcgccccaaaaagaaagaagctcctgttgaaattgtct 19020  T
Q  170 gttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    | ||||  ||||| |||||||||||||||||||||| ||||    
T  19019 gctatacttgtggtgagaaaggccacaagagtaatgcttgt 18979  T

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Target: scaffold0309 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 13081 - 12997
Alignment:
Q  185 agaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattg 269  Q
    |||||||||||||||||||||| |||  |   || |||||||||||||| |||||||||||||| || ||||  ||||| |||||    
T  13081 agaaaggccacaagagtaatgtatgtgaccgtgacgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattg 12997  T

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Target: scaffold0309; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 19880 - 19827
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaa 110  Q
    |||||| ||||||||||| ||||| || || |||||||||||||| ||||||||    
T  19880 taagggtcagcagagtcgccctaagccttatagtgcccctgctgataagggaaa 19827  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 28871 - 28966
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttagcggattgcaag 273  Q
    ||||||||||||||||||||||| ||||||||| | || || |  ||||| || ||| |||||||  ||||||||||||  ||||| || ||||||    
T  28871 tgtggcgagaaaggccacaagagcaatgtttgtcctaaggaggtaaagaaatgtttccggtgtggcaagaagggtcacacattagctgaatgcaag 28966  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 21995 - 21944
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaaga 199  Q
    ||||||||| ||||||| ||||||| ||| ||||| ||||||||||||||||    
T  21995 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaaga 21944  T

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Target: scaffold0081; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 37419 - 37368
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaaga 199  Q
    ||||||||| ||||||| ||||||| ||| ||||| ||||||||||||||||    
T  37419 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaaga 37368  T

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Target: scaffold1423 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 291 - 353
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| | ||||| ||||||| ||  ||||| |||||||||||||||||||||| ||||    
T  291 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgt 353  T

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Target: scaffold0611 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 9356 - 9418
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| | ||||| ||||||| ||  ||||| |||||||||||||||||||||| ||||    
T  9356 gatgctcctgcagagattgtctgttttacttgtggtgagaaaggccacaagagtaatgcttgt 9418  T

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Target: scaffold0120 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 14475 - 14413
Alignment:
Q  148 gatgctcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||||||| | ||||| ||||||| ||  ||||||||||||||||| |||||||||| ||||    
T  14475 gatgctcctgcagagattgtctgttttacttgtggcgagaaaggccataagagtaatgcttgt 14413  T

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Target: scaffold0507 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 11509 - 11428
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccga 139  Q
    ||||| ||||| |||||||| || || || |||||||||||||| ||||| || ||| || | |||||||||||||| ||||    
T  11509 aagggtcagcaaagtcgtcccaagccttatagtgcccctgctgataagggcaaacaacgagttaatgatgagaggagaccga 11428  T

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Target: scaffold0411 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 8893 - 8840
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaa 110  Q
    |||||| || |||||||| ||||| || ||||||||||||||||| ||||||||    
T  8893 taagggtcaacagagtcgccctaagccttacagtgcccctgctgataagggaaa 8840  T

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Target: scaffold0259 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 8736 - 8699
Alignment:
Q  58 aagggacagcagagtcgtcctaaaccgtacagtgcccc 95  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  8736 aagggacatcagagtcgtcctaagccgtacagtgcccc 8699  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 30766 - 30725
Alignment:
Q  60 gggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||| ||||||| |||||| ||||||||||||||||||||    
T  30766 gggacaacagagtcatcctaagccgtacagtgcccctgctga 30725  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 171488 - 171447
Alignment:
Q  169 tgttataagtgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||| || ||||| |||||||||||||||||||||||||||    
T  171488 tgttacaattgtggtgagaaaggccacaagagtaatgtttgt 171447  T

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Target: scaffold0509 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 12214 - 12162
Alignment:
Q  153 tcctactgagatagtctgttataagtgtggcgagaaaggccacaagagtaatg 205  Q
    |||||||||||| || || || |||||||| ||||| ||||||||||||||||    
T  12214 tcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 12162  T

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Target: scaffold0319 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 6982 - 6938
Alignment:
Q  57 taagggacagcagagtcgtcctaaaccgtacagtgcccctgctga 101  Q
    |||||| ||||||||||| ||||| || |||||||||||||||||    
T  6982 taagggtcagcagagtcgccctaagccttacagtgcccctgctga 6938  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 211 - 179
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||| |||||||||||||||||||||||||||    
T  211 tgtggtgagaaaggccacaagagtaatgtttgt 179  T

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Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 139553 - 139585
Alignment:
Q  178 tgtggcgagaaaggccacaagagtaatgtttgt 210  Q
    ||||| |||||||||||||||||||||||||||    
T  139553 tgtggtgagaaaggccacaagagtaatgtttgt 139585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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