View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8912A_low_19 (Length: 437)
Name: NF8912A_low_19
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8912A_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 23192159 - 23192544
Alignment:
| Q |
1 |
tcagtcacgtcttcaatctgaagtatcagtgctatgctaggtgctaatttgtgttttgaatgtattgtctcaatgctttgttcaggctggctatagacat |
100 |
Q |
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| T |
23192159 |
tcagtcacgtcttcaatctgaagtatcagtgctatgctaggtgctaatttgtgttttgaatgtattgtctcaatgctttgttcaggctggctacagacat |
23192258 |
T |
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| Q |
101 |
atcgattgtgctcgggtatatgataatgaaaaagaggtaaccaaaattataaagtttatttgaaataaatagttttgtatactaatattctaggtggtca |
200 |
Q |
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| T |
23192259 |
atcgattgtgctcgggtatatgataatgaaaaagaggtaaccaaaattataaagtttatttgaaataaatagttttgtatactaatattctaggtggtca |
23192358 |
T |
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| Q |
201 |
agaaaaaattgtttttattgttctggttttcttgatgctaggaaaaatgtatttgctgcagataggcgaggcgttgaagacactgttttctgctggggtt |
300 |
Q |
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| T |
23192359 |
agaaaaaattgtttttattgttctggttttcttgatgctaggaaaaatgtatttgctgcagataggcgaggcgttgaagacactgttttctgctggggtt |
23192458 |
T |
|
| Q |
301 |
gtacagcgtggtgaaatgttcatcacatcaaagctatggtatgtgtttggactaataattcttattatgataaaagataattgacc |
386 |
Q |
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| T |
23192459 |
gtacagcgtggtgaaatgttcatcacatcaaagctatggtatgtgtttggactaataattcttattatgataaaagataattgacc |
23192544 |
T |
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