View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_217 (Length: 255)

Name: NF8912A_low_217
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_217
NF8912A_low_217
[»] chr6 (23 HSPs)
chr6 (7-207)||(13727317-13727517)
chr6 (7-208)||(21280533-21280734)
chr6 (7-207)||(21479482-21479683)
chr6 (7-209)||(27788606-27788806)
chr6 (7-195)||(33774105-33774294)
chr6 (12-209)||(20711636-20711833)
chr6 (7-207)||(30832443-30832642)
chr6 (7-208)||(19737611-19737810)
chr6 (7-209)||(28075771-28075975)
chr6 (7-207)||(17353942-17354142)
chr6 (7-117)||(24711007-24711117)
chr6 (48-207)||(27314097-27314256)
chr6 (7-126)||(34397845-34397964)
chr6 (34-125)||(1155849-1155940)
chr6 (7-193)||(235157-235343)
chr6 (23-119)||(2477590-2477686)
chr6 (23-119)||(6159442-6159538)
chr6 (139-207)||(24710914-24710982)
chr6 (23-114)||(21183686-21183777)
chr6 (23-118)||(20611794-20611889)
chr6 (24-102)||(4036953-4037031)
chr6 (156-209)||(20611924-20611977)
chr6 (48-125)||(30121791-30121868)
[»] chr3 (35 HSPs)
chr3 (7-208)||(54619120-54619321)
chr3 (7-208)||(38681010-38681211)
chr3 (7-207)||(36715942-36716143)
chr3 (7-207)||(21582759-21582960)
chr3 (7-207)||(47467672-47467872)
chr3 (7-207)||(27078486-27078687)
chr3 (7-207)||(27084283-27084484)
chr3 (7-193)||(34290568-34290754)
chr3 (7-206)||(3953816-3954014)
chr3 (7-208)||(8073256-8073455)
chr3 (7-207)||(43207157-43207355)
chr3 (7-208)||(42098789-42098990)
chr3 (11-193)||(37168359-37168541)
chr3 (7-193)||(44708465-44708650)
chr3 (7-201)||(53149238-53149432)
chr3 (7-193)||(53506815-53507002)
chr3 (7-207)||(50939152-50939351)
chr3 (7-195)||(18372467-18372658)
chr3 (7-207)||(54407073-54407275)
chr3 (34-201)||(36605980-36606146)
chr3 (7-126)||(9878686-9878805)
chr3 (18-196)||(50258553-50258731)
chr3 (9-90)||(29620423-29620504)
chr3 (23-118)||(32319162-32319257)
chr3 (23-118)||(8420330-8420425)
chr3 (7-193)||(48157127-48157302)
chr3 (145-207)||(29620364-29620426)
chr3 (59-126)||(54574826-54574893)
chr3 (61-114)||(23641329-23641382)
chr3 (50-126)||(42453435-42453511)
chr3 (139-207)||(48720429-48720497)
chr3 (67-126)||(26279590-26279649)
chr3 (66-118)||(28689368-28689420)
chr3 (34-125)||(25855437-25855527)
chr3 (82-125)||(49393152-49393195)
[»] chr2 (32 HSPs)
chr2 (7-208)||(4505878-4506079)
chr2 (7-201)||(6964991-6965183)
chr2 (7-207)||(3155201-3155401)
chr2 (7-207)||(12337365-12337566)
chr2 (7-196)||(8907007-8907197)
chr2 (7-212)||(29939776-29939980)
chr2 (7-207)||(3952990-3953188)
chr2 (49-201)||(40636164-40636315)
chr2 (7-193)||(10762499-10762683)
chr2 (7-209)||(27506657-27506858)
chr2 (7-208)||(7162768-7162968)
chr2 (11-207)||(26716116-26716313)
chr2 (7-211)||(24410420-24410627)
chr2 (39-201)||(34693991-34694152)
chr2 (39-201)||(34716403-34716564)
chr2 (11-193)||(9046017-9046199)
chr2 (49-208)||(5952635-5952791)
chr2 (94-195)||(1396629-1396730)
chr2 (23-126)||(16097008-16097111)
chr2 (25-126)||(24035544-24035645)
chr2 (59-126)||(13800543-13800610)
chr2 (23-126)||(21665699-21665802)
chr2 (23-126)||(28425709-28425812)
chr2 (86-191)||(8327681-8327785)
chr2 (23-124)||(38400798-38400899)
chr2 (34-126)||(12134039-12134131)
chr2 (59-125)||(16227368-16227434)
chr2 (85-126)||(22727456-22727497)
chr2 (83-126)||(7742132-7742176)
chr2 (86-125)||(42029208-42029247)
chr2 (82-118)||(10252475-10252511)
chr2 (89-125)||(11952588-11952624)
[»] chr5 (48 HSPs)
chr5 (7-196)||(34756292-34756481)
chr5 (7-207)||(15480006-15480204)
chr5 (7-209)||(27078996-27079199)
chr5 (7-209)||(16591988-16592189)
chr5 (7-201)||(2274875-2275069)
chr5 (7-201)||(19523184-19523378)
chr5 (7-207)||(36187795-36187994)
chr5 (7-193)||(16198723-16198909)
chr5 (7-209)||(38869277-38869478)
chr5 (7-193)||(9364276-9364462)
chr5 (7-201)||(30854314-30854508)
chr5 (34-207)||(31194528-31194699)
chr5 (34-209)||(22986471-22986646)
chr5 (7-126)||(28822338-28822457)
chr5 (7-207)||(16799240-16799442)
chr5 (7-193)||(27924067-27924253)
chr5 (11-121)||(40389537-40389647)
chr5 (7-193)||(7670909-7671104)
chr5 (48-193)||(7338025-7338170)
chr5 (20-126)||(23284058-23284164)
chr5 (23-126)||(1366522-1366625)
chr5 (34-126)||(31881430-31881521)
chr5 (25-126)||(36868872-36868973)
chr5 (23-126)||(11242314-11242417)
chr5 (23-126)||(33037781-33037884)
chr5 (59-126)||(34425940-34426007)
chr5 (23-125)||(14318382-14318484)
chr5 (24-118)||(24395741-24395835)
chr5 (142-207)||(40389453-40389518)
chr5 (82-126)||(606214-606258)
chr5 (34-126)||(2024638-2024730)
chr5 (34-118)||(10543685-10543769)
chr5 (23-118)||(2530901-2530996)
chr5 (34-192)||(40794257-40794415)
chr5 (83-124)||(22648734-22648775)
chr5 (82-126)||(10407521-10407565)
chr5 (139-207)||(23283943-23284011)
chr5 (38-118)||(26718953-26719033)
chr5 (38-118)||(26988697-26988777)
chr5 (82-126)||(27530543-27530587)
chr5 (66-125)||(2412132-2412191)
chr5 (139-206)||(28822253-28822320)
chr5 (165-211)||(29143416-29143462)
chr5 (139-209)||(31881346-31881416)
chr5 (23-125)||(41911614-41911716)
chr5 (59-119)||(17344993-17345053)
chr5 (83-119)||(22875003-22875039)
chr5 (86-126)||(35080766-35080806)
[»] chr7 (35 HSPs)
chr7 (7-207)||(18776683-18776883)
chr7 (7-207)||(29077205-29077404)
chr7 (7-201)||(8171463-8171656)
chr7 (7-207)||(12596207-12596404)
chr7 (7-211)||(23550984-23551188)
chr7 (7-207)||(20091197-20091398)
chr7 (7-193)||(10329341-10329527)
chr7 (7-219)||(19692079-19692291)
chr7 (7-207)||(38414793-38414993)
chr7 (59-196)||(26254030-26254167)
chr7 (7-126)||(10955469-10955588)
chr7 (7-207)||(24525599-24525802)
chr7 (7-207)||(48983756-48983961)
chr7 (34-207)||(28749722-28749895)
chr7 (7-193)||(8239670-8239857)
chr7 (11-207)||(47984885-47985083)
chr7 (7-207)||(25010418-25010611)
chr7 (48-125)||(33162338-33162415)
chr7 (34-125)||(9021799-9021890)
chr7 (60-126)||(2611260-2611326)
chr7 (139-204)||(40357300-40357365)
chr7 (33-125)||(6765680-6765772)
chr7 (34-126)||(23744808-23744900)
chr7 (23-126)||(7398452-7398555)
chr7 (23-118)||(36891579-36891674)
chr7 (68-126)||(27237421-27237479)
chr7 (34-118)||(23859085-23859169)
chr7 (48-124)||(36902924-36903000)
chr7 (23-118)||(12981327-12981422)
chr7 (59-119)||(18201174-18201234)
chr7 (83-126)||(12419493-12419536)
chr7 (39-125)||(21763586-21763672)
chr7 (69-125)||(9014177-9014233)
chr7 (66-118)||(20153245-20153297)
chr7 (7-76)||(40357414-40357475)
[»] chr4 (52 HSPs)
chr4 (7-195)||(38209520-38209708)
chr4 (7-207)||(34768492-34768691)
chr4 (7-201)||(47128977-47129170)
chr4 (11-207)||(54780771-54780968)
chr4 (7-207)||(32915375-32915575)
chr4 (7-207)||(34027569-34027768)
chr4 (10-193)||(43455463-43455645)
chr4 (14-207)||(2790659-2790851)
chr4 (7-207)||(32128574-32128774)
chr4 (7-191)||(37777156-37777340)
chr4 (7-207)||(10978890-10979092)
chr4 (7-195)||(1105522-1105709)
chr4 (7-207)||(55255259-55255447)
chr4 (7-208)||(19498494-19498692)
chr4 (7-207)||(48209230-48209436)
chr4 (7-207)||(5128758-5128959)
chr4 (49-207)||(17679432-17679589)
chr4 (7-207)||(16845011-16845210)
chr4 (7-209)||(35465097-35465297)
chr4 (7-207)||(37514649-37514848)
chr4 (7-207)||(16882313-16882512)
chr4 (7-191)||(54083176-54083359)
chr4 (7-194)||(10428129-10428322)
chr4 (7-116)||(13460197-13460306)
chr4 (7-207)||(40089506-40089714)
chr4 (7-195)||(35779257-35779442)
chr4 (48-191)||(51964739-51964884)
chr4 (57-126)||(51691913-51691982)
chr4 (7-193)||(38352197-38352372)
chr4 (7-76)||(23509846-23509915)
chr4 (7-126)||(24969427-24969536)
chr4 (82-216)||(23508418-23508553)
chr4 (61-126)||(9578662-9578728)
chr4 (86-207)||(16922245-16922367)
chr4 (23-119)||(27112036-27112132)
chr4 (35-126)||(52468304-52468395)
chr4 (23-105)||(4167910-4167992)
chr4 (48-126)||(39655252-39655330)
chr4 (59-126)||(39329390-39329457)
chr4 (139-208)||(24969718-24969787)
chr4 (34-119)||(36118463-36118548)
chr4 (34-119)||(36178689-36178774)
chr4 (23-119)||(2135326-2135422)
chr4 (34-126)||(10041998-10042090)
chr4 (136-191)||(2975358-2975413)
chr4 (23-126)||(24396940-24397043)
chr4 (82-125)||(24614018-24614061)
chr4 (84-126)||(30507120-30507162)
chr4 (81-116)||(15735154-15735189)
chr4 (67-126)||(36362869-36362928)
chr4 (23-117)||(37744916-37745011)
chr4 (157-209)||(9578573-9578625)
[»] chr1 (41 HSPs)
chr1 (7-208)||(44655737-44655937)
chr1 (7-207)||(14146296-14146495)
chr1 (7-207)||(5027545-5027746)
chr1 (11-204)||(16140055-16140247)
chr1 (7-196)||(23185423-23185611)
chr1 (7-201)||(50881426-50881618)
chr1 (7-208)||(17168952-17169152)
chr1 (7-207)||(5316676-5316875)
chr1 (7-207)||(6771787-6771989)
chr1 (7-210)||(4971533-4971735)
chr1 (7-193)||(19955713-19955898)
chr1 (7-207)||(27906646-27906834)
chr1 (7-196)||(3406414-3406603)
chr1 (7-196)||(3440217-3440406)
chr1 (7-207)||(9172940-9173140)
chr1 (7-207)||(9180922-9181122)
chr1 (48-207)||(22865378-22865536)
chr1 (7-192)||(1366812-1366995)
chr1 (7-214)||(40501700-40501907)
chr1 (7-190)||(41697072-41697254)
chr1 (9-126)||(27559635-27559752)
chr1 (34-195)||(21740864-21741027)
chr1 (7-211)||(13913394-13913599)
chr1 (7-191)||(51607374-51607557)
chr1 (33-191)||(6889633-6889789)
chr1 (33-191)||(6891479-6891635)
chr1 (59-125)||(38547035-38547101)
chr1 (139-204)||(34247154-34247219)
chr1 (23-126)||(39134720-39134824)
chr1 (23-126)||(45758506-45758609)
chr1 (34-119)||(33170782-33170867)
chr1 (7-209)||(44895648-44895845)
chr1 (23-125)||(6221690-6221791)
chr1 (60-125)||(26803994-26804059)
chr1 (83-126)||(17322621-17322664)
chr1 (23-118)||(43235774-43235871)
chr1 (7-76)||(34247044-34247105)
chr1 (34-126)||(38853545-38853637)
chr1 (25-126)||(5533326-5533428)
chr1 (36-118)||(35392295-35392376)
chr1 (140-192)||(50146424-50146476)
[»] chr8 (32 HSPs)
chr8 (7-207)||(2952137-2952339)
chr8 (7-201)||(30883314-30883509)
chr8 (7-207)||(3048435-3048635)
chr8 (7-201)||(13534612-13534804)
chr8 (7-201)||(13624152-13624344)
chr8 (7-196)||(45475802-45475990)
chr8 (7-211)||(23606544-23606747)
chr8 (7-196)||(5860671-5860862)
chr8 (7-207)||(37430076-37430276)
chr8 (7-208)||(23798178-23798379)
chr8 (7-207)||(42600767-42600967)
chr8 (7-193)||(10917376-10917561)
chr8 (7-207)||(41879166-41879364)
chr8 (23-118)||(8102913-8103008)
chr8 (23-126)||(7944521-7944624)
chr8 (23-192)||(41677106-41677276)
chr8 (23-103)||(5942697-5942777)
chr8 (139-207)||(20003728-20003796)
chr8 (23-126)||(15167414-15167517)
chr8 (34-126)||(5973106-5973198)
chr8 (34-126)||(11290196-11290288)
chr8 (34-126)||(34789861-34789953)
chr8 (23-118)||(15078759-15078854)
chr8 (23-117)||(5721560-5721654)
chr8 (23-125)||(39332405-39332507)
chr8 (82-126)||(8646265-8646309)
chr8 (82-125)||(9108553-9108596)
chr8 (60-125)||(30674403-30674468)
chr8 (82-118)||(34868184-34868220)
chr8 (82-119)||(23941097-23941134)
chr8 (66-118)||(25561502-25561553)
chr8 (86-126)||(38009151-38009191)
[»] scaffold0070 (1 HSPs)
scaffold0070 (7-207)||(1328-1527)
[»] scaffold0039 (1 HSPs)
scaffold0039 (7-207)||(106523-106723)
[»] scaffold1590 (1 HSPs)
scaffold1590 (34-126)||(257-349)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-119)||(173516-173612)
[»] scaffold0001 (2 HSPs)
scaffold0001 (83-207)||(183121-183244)
scaffold0001 (7-72)||(181904-181969)
[»] scaffold0097 (1 HSPs)
scaffold0097 (23-119)||(38926-39022)
[»] scaffold0012 (1 HSPs)
scaffold0012 (23-118)||(206496-206591)
[»] scaffold0182 (1 HSPs)
scaffold0182 (59-125)||(23993-24059)
[»] scaffold1320 (1 HSPs)
scaffold1320 (23-118)||(1355-1450)
[»] scaffold0007 (1 HSPs)
scaffold0007 (24-126)||(230858-230960)
[»] scaffold0227 (1 HSPs)
scaffold0227 (82-125)||(16125-16168)
[»] scaffold0022 (2 HSPs)
scaffold0022 (59-126)||(40122-40191)
scaffold0022 (59-126)||(138182-138251)


Alignment Details
Target: chr6 (Bit Score: 141; Significance: 5e-74; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 13727517 - 13727317
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  13727517 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 13727418  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  13727417 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 13727318  T
Q  207 g 207  Q
    |    
T  13727317 g 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 21280533 - 21280734
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21280533 tttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21280632  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  21280633 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 21280732  T
Q  207 ga 208  Q
    ||    
T  21280733 ga 21280734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 21479482 - 21479683
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21479482 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21479581  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||    
T  21479582 aaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcagagacggccc 21479681  T
Q  206 tg 207  Q
    ||    
T  21479682 tg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 27788806 - 27788606
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  27788806 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27788707  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||||||| |||||||||||         || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  27788706 aaatagaaaattgctcttttaaaaaaa--tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 27788609  T
Q  207 gat 209  Q
    |||    
T  27788608 gat 27788606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 33774105 - 33774294
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  33774105 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 33774204  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctca 195  Q
    |||||||||||| |||||||         ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  33774205 aaatagaacattactcttttaaaaaaaaattatgttttgattttattactggcctcttttcattttcagagccgagcctccgaattctca 33774294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 20711833 - 20711636
Alignment:
Q  12 tgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaata 111  Q
    |||||| |||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  20711833 tgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaata 20711734  T
Q  112 gaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctgat 209  Q
    |||||||||||||||         || ||||||||||||| | || |||||||||||| ||||| |||||||||||||||||||| |||| |||||||    
T  20711733 gaacattgctcttttaaaaaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctgat 20711636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 30832642 - 30832443
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||   |||||||||||| ||||| |||| |||||||| ||||||||| ||||||||||||||| ||||||||||| |    
T  30832642 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgt 30832543  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| || |||||         || ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||| ||||    
T  30832542 aaatagaacatcgcgctttttaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggccct 30832444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 19737810 - 19737611
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  19737810 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatat 19737711  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||          |  |||||||||||||| ||||||||||||| | | |||||||| ||| | ||||||||| |||||||||    
T  19737710 aaatagaacattgctcttttaaaaaaaa-aacattttgattttatcactggcctcttttca-tcctagagccgaaccttcaaattctcagggacgaccct 19737613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 28075771 - 28075975
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  28075771 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatat 28075870  T
Q  107 aaatagaacattgctcttt---tnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgac 203  Q
    ||||||||||||||| |||             || ||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||| || ||||||    
T  28075871 aaatagaacattgctttttaaaataaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttag-gacgac 28075969  T
Q  204 cctgat 209  Q
    ||||||    
T  28075970 cctgat 28075975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 17353942 - 17354142
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||| |||  |||||| |||||| |||||| | | ||||||||||||||||||  || ||| |||||||||||||||||||||    
T  17353942 tttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 17354041  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||| ||||         || ||||||||||||||| || |||||||||||| | |||| |||||||||||||||| || |||| ||||    
T  17354042 aaatagaacattgctttttttaaaaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccct 17354141  T
Q  207 g 207  Q
    |    
T  17354142 g 17354142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 24711117 - 24711007
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||  ||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  24711117 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 24711018  T
Q  107 aaatagaacat 117  Q
    |||||||||||    
T  24711017 aaatagaacat 24711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 27314256 - 27314097
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatc-ttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgat 146  Q
    ||||||||||  ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||         || ||||||||    
T  27314256 tttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tacgttttgat 27314158  T
Q  147 tttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||| |||| |||| |||||    
T  27314157 tttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 34397845 - 34397964
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||| |||| |||||||||  | |||| |||||| ||| |||| | ||||||||||||||||||  || |||||||||||||||||||||||||    
T  34397845 tttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatat 34397944  T
Q  107 aaatagaacattgctctttt 126  Q
    ||||||||||||||||||||    
T  34397945 aaatagaacattgctctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 1155940 - 1155849
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||||| |||||||||| | |||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||    
T  1155940 tatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 235343 - 235157
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatataca--gcatcttgtatttatcttttaaaaaat 104  Q
    ||||||||| |||||||||| ||||  ||||||||||||| ||||| || | ||||||| | ||||||||   ||| ||| |||||||||||||||||||    
T  235343 tttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaat 235245  T
Q  105 ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||||| ||||||| ||||         || ||||||||||||||| ||| |||||||||||  || |||||| ||||||||||||    
T  235244 ataaatagatcattgct-ttttaaaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattct 235157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 2477686 - 2477590
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    |||||||||  ||||||||||| | |||||| | |||||||| ||||||||||   || ||||||||||||||||||||||| ||||| ||||||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 2477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 6159442 - 6159538
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||| | |||||||||||| | || ||||| |   ||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||    
T  6159442 ggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 24710982 - 24710914
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||||||||||||| |  |||||||||||| || |||| |||||||||||||||||| |||| |||||    
T  24710982 gttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggccctg 24710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 21183777 - 21183686
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaa 114  Q
    |||||||||  ||||||||||| | ||||| || | |||||||| |||||||||   |  |||||||||||||||||||||| |||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 20611794 - 20611889
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||  ||||||||||| | |||||||| | | |||  || ||||||||  || |||||||||||| |||||||||| ||| |||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacatt 20611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 4036953 - 4037031
Alignment:
Q  24 gttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaa 102  Q
    |||||||| |||||||||||| |  || |||| | ||||||||  |||||||| ||| ||||||||||||| |||||||    
T  4036953 gttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 20611924 - 20611977
Alignment:
Q  156 ggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctgat 209  Q
    |||||||||||| || |||||||||||||||||||||  ||  |||||||||||    
T  20611924 ggcctcttttcacttacagagccgagcctccgaattcgtaggaacgaccctgat 20611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 30121791 - 30121868
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||||| | | |||| ||||||||||   || ||||||||||| ||||||||||| |||||| ||||||| |||||    
T  30121791 tttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 3e-72; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 54619321 - 54619120
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  54619321 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 54619222  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  54619221 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccct 54619122  T
Q  207 ga 208  Q
    ||    
T  54619121 ga 54619120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 38681211 - 38681010
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||| |||||||  ||||||||||||| |||||||||| | ||||||||||| |||| ||| |||||||||||||||||||||||||    
T  38681211 tttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatat 38681112  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  38681111 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 38681012  T
Q  207 ga 208  Q
    ||    
T  38681011 ga 38681010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 36716143 - 36715942
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||| |||||| |||||||| |||  |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  36716143 tttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 36716044  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||||||||||||         ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  36716043 aaatagaacattgctcttttaaataaaaattatgtttttattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccc 36715944  T
Q  206 tg 207  Q
    ||    
T  36715943 tg 36715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 21582759 - 21582960
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21582759 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 21582858  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||| ||||||| ||||||          || ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||| |||    
T  21582859 aaataaaacattgttcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggccc 21582958  T
Q  206 tg 207  Q
    ||    
T  21582959 tg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 47467672 - 47467872
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  47467672 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatat 47467771  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| |||||||           | ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  47467772 aaatagaacatcgctctttaaaaaaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 47467871  T
Q  207 g 207  Q
    |    
T  47467872 g 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 27078687 - 27078486
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||| |||||| ||||  ||||||||||||| |||||||||| ||| |||||||||||||| |||  ||||||||||||||||||||||||    
T  27078687 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27078588  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||||||| ||||         ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||| |||    
T  27078587 aaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccc 27078488  T
Q  206 tg 207  Q
    ||    
T  27078487 tg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 27084484 - 27084283
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||| |||||| ||||  ||||||||||||| |||||||||| ||| |||||||||||||| |||  ||||||||||||||||||||||||    
T  27084484 tttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatat 27084385  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||||||| ||||         ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||| |||    
T  27084384 aaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccc 27084285  T
Q  206 tg 207  Q
    ||    
T  27084284 tg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 34290754 - 34290568
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  34290754 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34290655  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||||||||| | ||||         || ||||||||||||||| || | |||||||||| |||||||||||||||||||||||    
T  34290654 aaatagaacattgtttttttaaaaaaaaatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattct 34290568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 206
Target Start/End: Complemental strand, 3954014 - 3953816
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||  ||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  3954014 tttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3953915  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||| ||||||         ||  |||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||| ||||    
T  3953914 aaatagaacattgttcttttaaaaaaaa-tacattttaattttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 8073455 - 8073256
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||| |||||| |||||||  ||||||||||||| |||||| | | ||||||||||||||||||  || |||||||||||||||||||||||||    
T  8073455 tttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 8073357  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||||||||||| |||||||         || ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  8073356 aaatagaacattactcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccct 8073258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 43207355 - 43207157
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| ||| |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  43207355 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacct-ttgatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 43207257  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||| | ||||||| ||||||||||||||| |||||||||||||||| |||||| || |||| ||||    
T  43207256 aaatagaacattgctcttttaaaaaaaa-tacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccct 43207158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 42098789 - 42098990
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||| || |||||||||||  ||||||||||||| ||||||||||  || |||||||||||||| ||| |||||||||||||||||||||||||    
T  42098789 tttggtgttaagtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 42098888  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| ||||||||          |  |||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||| |||| ||||    
T  42098889 aaatagaacatcgctcttttaaaaaaaaagacattttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccct 42098988  T
Q  207 ga 208  Q
    ||    
T  42098989 ga 42098990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 37168359 - 37168541
Alignment:
Q  11 gtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaat 110  Q
    |||||||||||| ||||||||  ||||||||||||| |||||||| | ||| |||| ||||||||| ||| ||| |||||||||||||||||||||||||    
T  37168359 gtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaat 37168458  T
Q  111 agaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||||| | ||||         || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  37168459 agaacattgtttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 37168541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 44708465 - 44708650
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | ||||||||| |||||||| ||| ||| |||||||||||||||||||||    
T  44708465 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatat 44708564  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||||||||| || ||||         || ||||||||||||||| ||||||||||||||| ||||||  |||||||||||||||    
T  44708565 aaatagaacatttct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattct 44708650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 53149432 - 53149238
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| | ||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  53149432 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 53149333  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||| ||||||||          | ||||||||||||||| ||| ||||||||||| || || | |||||||||||||||||| ||||    
T  53149332 aaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattctcagagacg 53149238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 53507002 - 53506815
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| ||||  ||||||||||||| |||||||| | |||||||||||||||||| | | ||| |||||||||||||||||||||    
T  53507002 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 53506903  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||||||||| | ||||          |||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||    
T  53506902 aaatagaacattgtttttttaaaaaaaaaatatgttttgattttatcactggcctctcttcattcccagagccgagccttcgaattct 53506815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 50939351 - 50939152
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||| ||||||||||||  ||||||||||||| ||| |||| | ||||||||  |||||||| ||| ||| |||||||||||||||||||||    
T  50939351 tttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatat 50939252  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||| ||||||| ||||         || ||||||||||||||| |||||||||||||||  |||||||||||| ||||||||| || |||| ||||    
T  50939251 aaatagatcattgct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccct 50939153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 18372467 - 18372658
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgc----atatatacagcatcttgtatttatcttttaaaaa 102  Q
    ||||||||||| ||||| |||||||  ||||||||||||| ||||||||||  |||||||||    ||||||||  || |||||||||||||||||||||    
T  18372467 tttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaa 18372566  T
Q  103 atataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctca 195  Q
    ||||||||||||||||||||||||         || ||||||||||||||| || |||||||||||| |||| | ||||||||||||||||||    
T  18372567 atataaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattctca 18372658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 54407275 - 54407073
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| || |  ||||||||||||| |||||||| | | |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  54407275 tttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54407177  T
Q  107 aaatagaacattg---ctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgac 203  Q
    |||||||||||||    | ||||          | |||||||||||||||  |||||||||||||| ||||||||||||||||||||||| || |||| |    
T  54407176 aaatagaacattgttttttttttaaaaaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggc 54407077  T
Q  204 cctg 207  Q
    ||||    
T  54407076 cctg 54407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 36605980 - 36606146
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatc-ttttaaaaaatataaatagaacattgctcttttnnnnnn 132  Q
    ||||||||||| | ||||| |||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| ||          
T  36605980 tatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctattaaaaaa 36606078  T
Q  133 nnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
       || ||||||||||||||| || ||||||||||||||||||||||| |||||||||| |||| ||||    
T  36606079 aa-tacgttttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacg 36606146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 9878805 - 9878686
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||| ||||| ||||||||||| |  |||||| |||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  9878805 tttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatat 9878706  T
Q  107 aaatagaacattgctctttt 126  Q
    |||||||| |||||||||||    
T  9878705 aaatagaatattgctctttt 9878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 50258731 - 50258553
Alignment:
Q  18 gtgggggttcctcacatatacggtagtcactttcacc-tcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaaca 116  Q
    ||||||||||||||   ||||  |||||| ||||||| ||  ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  117 ttgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    | ||||||||         |||||||||||||||||| ||  |||||||| || ||||||||||||||||||||||||||    
T  50258631 tcgctctttttaaaaaaa-tatgttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcag 50258553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 29620504 - 29620423
Alignment:
Q  9 tggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtattt 90  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||| | | |||||||||||||| ||| |||||||||    
T  29620504 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 32319257 - 32319162
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||  ||||| | |||| | |||||||| | ||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||    
T  32319257 ggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacatt 32319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 8420330 - 8420425
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||  |||||||| ||| | |||||| | | |||||||  ||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  8420330 ggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacatt 8420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 48157127 - 48157302
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||| ||||| ||||||||||||||  ||||| ||||||| |||||||| | ||||||||||          || ||| |||||||||||||||||||||    
T  48157127 tttgatgttaagtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 48157216  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||| ||||||  ||||        |  |||||||||||||||| ||||||||||| ||| || || |||||||||||||||||    
T  48157217 aaatagatcattgcattttttttaaaaatg-tgttttgattttatcactggcctctttttattcccggaaccgagcctccgaattct 48157302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 29620426 - 29620364
Alignment:
Q  145 attttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||||||| || |||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 54574893 - 54574826
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||||||||||| | | ||||||||||| |||| |||||| |||||||||||||| ||||||    
T  54574893 ggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattgttctttt 54574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 23641382 - 23641329
Alignment:
Q  61 tgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaa 114  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 42453435 - 42453511
Alignment:
Q  50 tcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||| | |||||| ||||||||||   || ||||||||||||||||||||||| ||||| |||||||| ||||||    
T  42453435 tcacctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattgttctttt 42453511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 48720497 - 48720429
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||||||||||||| |  |||||||||||| |||||||||||||||| |||||| || |||| |||||    
T  48720497 gttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctg 48720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 26279590 - 26279649
Alignment:
Q  67 gcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||  || ||| ||||||||||||||||||| |||||||||||||| ||||||    
T  26279590 gcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattgttctttt 26279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 28689420 - 28689368
Alignment:
Q  66 cgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||||| ||| ||||||||||||||||  ||||| |||||||||||||    
T  28689420 cgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 25855437 - 25855527
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||| | ||||| || | |||| ||  |||||||||  || |||||||| |||||||||||||| |||||||||||||| |||||    
T  25855437 tatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacattgttcttt 25855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 49393152 - 49393195
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||    
T  49393152 cttgtatttatcttttaaaaaatttaaagagaacattgttcttt 49393195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 4505878 - 4506079
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  4505878 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 4505977  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  4505978 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccct 4506077  T
Q  207 ga 208  Q
    ||    
T  4506078 ga 4506079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 6964991 - 6965183
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  6964991 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 6965090  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||||||||||        |||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  6965091 aaatagaacattgctcttttaaaaaaaatta--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacg 6965183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 3155201 - 3155401
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  3155201 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3155300  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        ||||||||| ||||||||| || |||||||||||||  | |||||||||||||||||||||| |||| ||||    
T  3155301 aaatagaacattgctcttttaaaaaaaattatgttttaattttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacggccct 3155400  T
Q  207 g 207  Q
    |    
T  3155401 g 3155401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 12337566 - 12337365
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||| ||||||||   || |||||||||||||||||||||||||    
T  12337566 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatat 12337467  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||||||||||||         |||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| |||    
T  12337466 aaatagaacattgctcttttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcagggacggccc 12337367  T
Q  206 tg 207  Q
    ||    
T  12337366 tg 12337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 8907197 - 8907007
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| ||||  ||||||||||||| ||| |||||| |||||||||||||||||| ||  |||||||||||||||||||||||||    
T  8907197 tttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatat 8907098  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    |||||||||||| |||||||         ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  8907097 aaatagaacattactcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcag 8907007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 212
Target Start/End: Complemental strand, 29939980 - 29939776
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||| |||||||||  ||||||||||||| |||||||| | ||||||||||||||||||  || |||||||||||||| ||||||||||    
T  29939980 tttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatat 29939881  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||||| || |||||||| ||| |||||||||||||| ||||||||||| ||||  |||    
T  29939880 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctctttttattcccagagccgagccttcgaattctcagggacggtcct 29939782  T
Q  207 gattaa 212  Q
    ||||||    
T  29939781 gattaa 29939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 3952990 - 3953188
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||   |||||||| ||| |||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  3952990 tttggtgttaggtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatat 3953089  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| | |||||          ||  |||||||||||||| || |||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  3953090 aaatagaacatcggtcttt--aaaaaaaatacattttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccct 3953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 40636164 - 40636315
Alignment:
Q  49 ttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 148  Q
    ||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tatgttttgattt 40636262  T
Q  149 tatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  40636263 tatcactggcctcttttcattcccagagctgagcctccgaattctcagggacg 40636315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 10762683 - 10762499
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||||| ||||||||| ||| ||| |||||||||||||||||||||    
T  10762683 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatat 10762584  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||||||||||||||||           | ||||| ||||||||| ||||||||||||||| ||||||| |||||||| ||||||    
T  10762583 aaatagaacattgctctttaaaaaaaaa--acgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattct 10762499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 27506858 - 27506657
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||| ||||||||  ||||| ||||||| ||| |||| | |||||||| ||||||||| ||| ||| |||||||||||||||||||||    
T  27506858 tttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 27506759  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||| ||||||| ||||         || ||||||||||||||| |||||||||||||||  |||||||||||||||||||||| || |||| ||||    
T  27506758 aaatagatcattgct-tttttttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccct 27506660  T
Q  207 gat 209  Q
    |||    
T  27506659 gat 27506657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 7162768 - 7162968
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||||  || |||||||||||||| ||| |||||||||||||||||||||||||    
T  7162768 tttggtgttaggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatat 7162867  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| ||||||||          |  |||| ||||||||| ||||||||||||||| || |||| |||||| |||| |||||| |||| ||||    
T  7162868 aaatagaacatcgctcttttaaaaaaaa-gacattttaattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccct 7162966  T
Q  207 ga 208  Q
    ||    
T  7162967 ga 7162968  T

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Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 207
Target Start/End: Original strand, 26716116 - 26716313
Alignment:
Q  11 gtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaatataaa 109  Q
    |||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||  ||| ||| |||||||||||| ||||||||||||    
T  26716116 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaa 26716215  T
Q  110 tagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    |||||||||||||||||         || ||||||||||||||| || |||||||||||| ||| |||||||||  |||||||| || |||| |||||    
T  26716216 tagaacattgctcttttaaaaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccctg 26716313  T

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Target: chr2; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 211
Target Start/End: Original strand, 24410420 - 24410627
Alignment:
Q  7 tttggtgttaggtgggg-gttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaata 105  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  24410420 tttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 24410519  T
Q  106 taaatagaacattgctcttt--tnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgac 203  Q
    |||||||||||||| | |||            || ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||| || |||| |    
T  24410520 taaatagaacattgttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggc 24410619  T
Q  204 cctgatta 211  Q
    ||||||||    
T  24410620 cctgatta 24410627  T

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Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 201
Target Start/End: Original strand, 34693991 - 34694152
Alignment:
Q  39 ggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttat 138  Q
    |||||||| ||| |||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||         ||     
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tac 34694089  T
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    |||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||| ||||    
T  34694090 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacg 34694152  T

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Target: chr2; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 201
Target Start/End: Original strand, 34716403 - 34716564
Alignment:
Q  39 ggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttat 138  Q
    |||||||| ||| |||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||         ||     
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaa-tac 34716501  T
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    |||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||| ||||    
T  34716502 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacg 34716564  T

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Target: chr2; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 9046017 - 9046199
Alignment:
Q  11 gtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaatataaa 109  Q
    |||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||| ||||||||||||    
T  9046017 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaa 9046116  T
Q  110 tagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||||||| ||||||         || ||||||||||||||| ||||||||||| ||| ||||||| |||||  ||||||||    
T  9046117 tagaacattgttcttttaaaaacaa-tacgttttgattttatcactggcctcttttaattcccagagctgagccaacgaattct 9046199  T

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Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 208
Target Start/End: Complemental strand, 5952791 - 5952635
Alignment:
Q  49 ttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 148  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||  ||||||| ||||||||||||||         || ||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctcttttaaaaaaaa-tacgttttgattt 5952695  T
Q  149 tatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctga 208  Q
    ||||| ||||||||||||||| | |||||||| ||||||||||||||| |||||| ||||    
T  5952694 tatcattggcctcttttcattccgagagccgaacctccgaattctcagggacgacactga 5952635  T

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Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 1396730 - 1396629
Alignment:
Q  94 ttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  1396730 ttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattct 1396631  T
Q  194 ca 195  Q
    ||    
T  1396630 ca 1396629  T

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Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 16097008 - 16097111
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  |||| |||||| | |||||||| | |||||||  ||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 16097107  T
Q  123 tttt 126  Q
    ||||    
T  16097108 tttt 16097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 24035645 - 24035544
Alignment:
Q  25 ttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctt 124  Q
    |||||||  ||| ||||||| | |||||||| | |||||| ||||| ||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  24035645 ttcctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 24035546  T
Q  125 tt 126  Q
    ||    
T  24035545 tt 24035544  T

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Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 13800610 - 13800543
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||| ||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||| ||||||    
T  13800610 ggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacattgttctttt 13800543  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 21665802 - 21665699
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||||| | |||||| | ||| |||| | |||||||||  || | ||||||||||||||||||||| |||||||||||||| ||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattgttc 21665703  T
Q  123 tttt 126  Q
    ||||    
T  21665702 tttt 21665699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 28425812 - 28425709
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    ||||||||| ||||| |||||| | |||||| | | ||||||| ||||||||||  || ||||||||||||||||||||  | |||||||||||||| ||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacattgttc 28425713  T
Q  123 tttt 126  Q
    ||||    
T  28425712 tttt 28425709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 8327681 - 8327785
Alignment:
Q  86 tatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctc 185  Q
    |||||||||||||||||||||||||||| ||||||| ||||         || ||||||||||||||| ||  ||||||||||||||||| | |||||||    
T  8327681 tatttatcttttaaaaaatataaatagatcattgct-tttttaaaaaaaatacgttttgattttatcactgatctcttttcatttccagaactgagcctc 8327779  T
Q  186 cgaatt 191  Q
    ||||||    
T  8327780 cgaatt 8327785  T

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Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 38400798 - 38400899
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||||| | |||||||| |   |||| ||||||||||   || ||||||||||||||||||||||| |||||||||||||| ||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 38400897  T
Q  123 tt 124  Q
    ||    
T  38400898 tt 38400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 12134131 - 12134039
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | |||||| | | |||||| ||||||||||| | | |||||||||||||||||||   | |||||||||||||| ||||||    
T  12134131 tatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattgttctttt 12134039  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 16227434 - 16227368
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||| | |||||||||  || ||||||||||||||||||||||| ||||||||| |||| |||||    
T  16227434 ggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaaaattgttcttt 16227368  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 22727497 - 22727456
Alignment:
Q  85 gtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||||||||||||| |||||||||||||| ||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacattgttctttt 22727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 7742176 - 7742132
Alignment:
Q  83 ttgtatttatcttttaaaaaa-tataaatagaacattgctctttt 126  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||    
T  7742176 ttgtatttatcttttaaaaaaatataaatagaacattgttctttt 7742132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 42029208 - 42029247
Alignment:
Q  86 tatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  42029208 tatttatcttttaaaaaatttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 10252475 - 10252511
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  10252475 cttgtatttatcttttaaaaaatttaaattgaacatt 10252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 11952624 - 11952588
Alignment:
Q  89 ttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||||||||||||| |||||||||||||| |||||    
T  11952624 ttatcttttaaaaaatttaaatagaacattgttcttt 11952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 34756481 - 34756292
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||| ||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  34756481 tttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 34756382  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    ||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34756381 aaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcag 34756292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 15480204 - 15480006
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||   |||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  15480204 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatat 15480105  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| | |||||          |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  15480104 aaatagaacatcggtcttt--aaaaaaaatatgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 15480007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 27078996 - 27079199
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||| ||||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  27078996 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 27079095  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||||||||||||          || ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| |||| |||    
T  27079096 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccc 27079195  T
Q  206 tgat 209  Q
    ||||    
T  27079196 tgat 27079199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 16592189 - 16591988
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||  || | ||||||||||||||| |||||||    
T  16592189 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatat 16592090  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         |||||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||||  |||| ||||    
T  16592089 aaatagaacattgctcttttaaaaaaaa-tatgttttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccct 16591991  T
Q  207 gat 209  Q
    |||    
T  16591990 gat 16591988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 2274875 - 2275069
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||||||   ||||||||||||| |||||||||| ||||||| ||||||||||   | |||||||||||||||||||||||||    
T  2274875 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatat 2274974  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||| ||||||||         || ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  2274975 aaatagaacatcgctcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacg 2275069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 19523184 - 19523378
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  19523184 tttggtgttaggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 19523283  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||  |||||||           | ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  19523284 aaatagaacaccgctctttaaaaaaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacg 19523378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 36187994 - 36187795
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||| |||| ||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  36187994 tttggtgttaggtggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatat 36187895  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| ||||||||          | ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  36187894 aaatagaacatcgctcttttaaaaaaaa-aacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 36187796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 16198909 - 16198723
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||| |||||||||||  || ||| |||||||||||||||||||||    
T  16198909 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatat 16198810  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||||||||||| |||          || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  16198809 aaatagaacattgctttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 16198723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 38869478 - 38869277
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| ||||  ||||||||||||| |||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||    
T  38869478 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 38869379  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||| | || |||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  38869378 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccct 38869280  T
Q  207 gat 209  Q
    |||    
T  38869279 gat 38869277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 9364276 - 9364462
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||| ||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  9364276 tttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9364375  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||||||||||| ||           || ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  9364376 aaatagaacattgcttttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagctgagcctccgaattct 9364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 30854314 - 30854508
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  |||||| |||||| ||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  30854314 tttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 30854413  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||||||||||         || ||||| ||||||||  || ||| |||||||| |||||||||||||||| |||| |||| ||||    
T  30854414 aaatagaacattgctcttttaaaaaaaaatacgttttaattttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacg 30854508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 34 - 207
Target Start/End: Complemental strand, 31194699 - 31194528
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnn 133  Q
    ||||||||||| | |||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||           
T  31194699 tatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaagaa 31194601  T
Q  134 nttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
      || ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |||| |||| |||||    
T  31194600 a-tacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 34 - 209
Target Start/End: Complemental strand, 22986646 - 22986471
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnn 133  Q
    ||||||||||||| |||||||| | ||||||||||||||||||  ||  |||||||| ||||||||||||||| |||||||||||||||||||           
T  22986646 tatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgctcttttaaaaaaa 22986547  T
Q  134 nttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctgat 209  Q
     ||| ||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||  |||| |||||||    
T  22986546 attacgttttgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctgat 22986471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 28822457 - 28822338
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||| |||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  28822457 tttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 28822358  T
Q  107 aaatagaacattgctctttt 126  Q
    ||||||||||||||||||||    
T  28822357 aaatagaacattgctctttt 28822338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 16799442 - 16799240
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||| ||||||||||||||  ||||||||| ||| |||||||| | |||||||||||||||||| ||| ||| ||||||| |||||||||||||    
T  16799442 tttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatat 16799343  T
Q  107 aaatagaaca-ttgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    |||||||||| || |||||||          || ||||||||||||||| || | |||||||||| ||||||||||||||||||||||| || |||| ||    
T  16799342 aaatagaacatttactcttttaaaaaaaaaatacgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggcc 16799243  T
Q  205 ctg 207  Q
    |||    
T  16799242 ctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 27924067 - 27924253
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||| ||| ||||||||  ||||||||||||| ||| |||| | | |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  27924067 tttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 27924166  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||  ||||||| ||||         || ||||||||||||||| |||||||||||||||  ||||| |||||| |||||||||    
T  27924167 aaataggtcattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattct 27924253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 40389647 - 40389537
Alignment:
Q  11 gtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaat 110  Q
    ||||||||||||||||||||| | |||||||||||| |||||||| | | ||||||||||||||||  || ||| |||||||||||||||||||||||||    
T  40389647 gtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaat 40389548  T
Q  111 agaacattgct 121  Q
    |||||||||||    
T  40389547 agaacattgct 40389537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 7670909 - 7671104
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaata 105  Q
    ||||||||||||||||| | |||||  ||||||||||||| |||||||| | ||||||||| | |||||| ||| ||| |||||||||||| ||||||||    
T  7670909 tttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaata 7671008  T
Q  106 taaatagaacattgctctttt--------nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||||||||||||| ||||                 || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7671009 taaatagaacattgctttttttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 7671104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 7338025 - 7338170
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgatt 147  Q
    |||||||| | ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||           | |||||||||    
T  7338025 tttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaaaaaacgttttgatt 7338124  T
Q  148 ttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||  || |||||||||||| | |||||||||||||| ||||||    
T  7338125 ttatccttgacctcttttcattcctagagccgagcctccaaattct 7338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 23284164 - 23284058
Alignment:
Q  20 gggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||||||||  ||||||||||||| ||||| || | ||||||||||||||||||  || ||||||||||   |||||||||||||||||||||||||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  120 ctctttt 126  Q
    |||||||    
T  23284064 ctctttt 23284058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 1366625 - 1366522
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    ||||||||| |||||||||||| | |||||| | | |||||| |||||||||||  ||||||||||||||||| |||||||| |||||||||||||| ||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattgttc 1366526  T
Q  123 tttt 126  Q
    ||||    
T  1366525 tttt 1366522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 31881521 - 31881430
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | ||||| |||| | ||| |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  31881521 tatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttt 31881430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 36868973 - 36868872
Alignment:
Q  25 ttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctt 124  Q
    |||||||  ||||||||||| | |||||| | | |||||||| |||||||||  || ||||||||||||||||||||||  |||||||||||||| ||||    
T  36868973 ttcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacattgttctt 36868874  T
Q  125 tt 126  Q
    ||    
T  36868873 tt 36868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 11242417 - 11242314
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||||| | || || || | | |||| | |||||||||| ||| |||||||||||||||||||||  |||||||||||||| ||    
T  11242417 ggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattgttc 11242318  T
Q  123 tttt 126  Q
    ||||    
T  11242317 tttt 11242314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 33037781 - 33037884
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||| |   |||||||| | |||||||  |||||||||   ||||||||||||||||||||||||| |||||| ||||||| ||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattgttc 33037880  T
Q  123 tttt 126  Q
    ||||    
T  33037881 tttt 33037884  T

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Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 34425940 - 34426007
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||| | ||||||||| ||| |||||||||||||||||||||||  ||||||||||||| ||||||    
T  34425940 ggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattgttctttt 34426007  T

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Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 14318484 - 14318382
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||||| | |||||  | | | |||| | |||||||||  || ||||||||||||||||||||||| |||||||||||||| ||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 14318385  T
Q  123 ttt 125  Q
    |||    
T  14318384 ttt 14318382  T

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Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 24395741 - 24395835
Alignment:
Q  24 gttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||  |||||||| || | |||||||| | | ||||  | ||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  24395741 gttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 24395835  T

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Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 40389518 - 40389453
Alignment:
Q  142 ttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    |||||||||||| || | |||||||||| ||||||||||||||||||||||| || || |||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggatgaccctg 40389453  T

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Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 606214 - 606258
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||    
T  606214 cttgtatttatcttttaaaaaatttaaatagaacattgttctttt 606258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 2024730 - 2024638
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||| |||||| | ||||| || | |||||| | ||||||||| |||  |||||||||||||| ||||||| |||||||||||||| ||||||    
T  2024730 tatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattgttctttt 2024638  T

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Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 10543685 - 10543769
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||||| | |||||||| | | |||| |||||||||||| || ||| ||||||||||||||||||| ||| | |||||||    
T  10543685 tatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacatt 10543769  T

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Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 2530996 - 2530901
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||  ||||| ||||| | |||||||| | | ||||||| ||||||||  ||  |||||||||||||||||||||  |||||||||||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 40794415 - 40794257
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnn 133  Q
    ||||||||||| | |||||||| |||||||| |  |||| ||| ||   |||||||| ||||||||||||| |||||| ||||||| ||||||           
T  40794415 tatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacattgttcttttaaaaaaa 40794316  T
Q  134 nttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattc 192  Q
       | ||||| ||||||| |   ||||||||||| || |||||||||||||||||||||    
T  40794315 aaaacgtttttattttattacgagcctcttttcacttacagagccgagcctccgaattc 40794257  T

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Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 22648775 - 22648734
Alignment:
Q  83 ttgtatttatcttttaaaaaatataaatagaacattgctctt 124  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  22648775 ttgtatttatcttttaaaaaatttaaatagaacattgttctt 22648734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 10407521 - 10407565
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||    
T  10407521 cttgtgtttatcttttaaaaaatttaaatagaacattgttctttt 10407565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 23284011 - 23283943
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||||||||||||| ||||||||||||||| | | | | ||||||| |||||||||| |||| |||||    
T  23284011 gttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctg 23283943  T

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Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 26719033 - 26718953
Alignment:
Q  38 cggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||| | |||||||| |  ||||| |||||||||||  ||  |||||||||||||||||||| | |||||||||||||    
T  26719033 cggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26718953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 26988777 - 26988697
Alignment:
Q  38 cggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||| | |||||||| |  ||||| |||||||||||  ||  |||||||||||||||||||| | |||||||||||||    
T  26988777 cggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26988697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 27530543 - 27530587
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||    
T  27530543 cttgtattaatcttttaaaaaatttaaatagaacattgttctttt 27530587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 2412132 - 2412191
Alignment:
Q  66 cgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||||||||  ||  |||||||||| ||||||||||| |||||||||||||| |||||    
T  2412132 cgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacattgttcttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 28822320 - 28822253
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||| |  |||||||||||| ||| |||||| |||||||||||| || |||| ||||    
T  28822320 gttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 29143462 - 29143416
Alignment:
Q  165 tcatttccagagccgagcctccgaattctcagcgacgaccctgatta 211  Q
    ||||||||||||||||||||||||||||| |   |||||||||||||    
T  29143462 tcatttccagagccgagcctccgaattcttatgaacgaccctgatta 29143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 31881416 - 31881346
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctgat 209  Q
    ||||||||||||| | || || ||||||||| |||||||||||||||  |||| |||| |||| |||||||    
T  31881416 gttttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctgat 31881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 41911716 - 41911614
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    ||||||||| ||||||| |||| | ||| || | | |||||||||| |||||||  || ||||||||| ||||||||||||  ||| | |||||||| ||    
T  41911716 ggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaaattaagttgaacattgttc 41911617  T
Q  123 ttt 125  Q
    |||    
T  41911616 ttt 41911614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 17344993 - 17345053
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||||||||||| |   ||||||||||||||  | |||||||| ||||||||||||||    
T  17344993 ggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacattg 17345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 22875003 - 22875039
Alignment:
Q  83 ttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  22875003 ttgtatttatcttttaaaaaatttaaatagaatattg 22875039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 35080806 - 35080766
Alignment:
Q  86 tatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||||||||||| |||||| ||||||| ||||||    
T  35080806 tatttatcttttaaaaaatttaaataaaacattgttctttt 35080766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 18776883 - 18776683
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| ||||  ||||||||||||| |||||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  18776883 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 18776784  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18776783 aaatagaacattgctcttttaaaaaaaattatattttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccct 18776684  T
Q  207 g 207  Q
    |    
T  18776683 g 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 29077205 - 29077404
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  29077205 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 29077304  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  29077305 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 29077403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 8171656 - 8171463
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8171656 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 8171557  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||||||||||         || | ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| ||||    
T  8171556 aaatagaacattgctcttttaaaaaaaa-tacgctttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacg 8171463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 12596404 - 12596207
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||   |||||||||||| |||||||||| |||||||| ||||||||| ||| ||||||||||||||| |||||||||    
T  12596404 tttggtgttaggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatat 12596305  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| |||||||           | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  12596304 aaatagaacatcgctctttaaaaaaaa---acgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 12596208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 23551188 - 23550984
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaata 105  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | | ||||||||||||||||  || ||| |||||||||||||| ||||||    
T  23551188 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaata 23551089  T
Q  106 taaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    |||||||| ||||||| ||||         |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| || ||||||||    
T  23551088 taaatagatcattgct-ttttttaaaaaaatatgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccc 23550990  T
Q  206 tgatta 211  Q
    ||||||    
T  23550989 tgatta 23550984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 20091398 - 20091197
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  20091398 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 20091299  T
Q  107 aaatagaacattg-ctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||| |||||  | ||||         || ||||||||||||||| |||||||||||||||  |||||||||||||||||||||| || |||| |||    
T  20091298 aaatagatcattgttttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccc 20091199  T
Q  206 tg 207  Q
    ||    
T  20091198 tg 20091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 10329527 - 10329341
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||| ||||||||| ||||  ||||||||||||| |||||||| | ||| | || ||||||||| ||| ||| |||||||||||||||||||||    
T  10329527 tttggtgttaagtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatat 10329428  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||||||||||| ||||         || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10329427 aaatagaacattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 10329341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 19692079 - 19692291
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||| | ||||||||||  ||||||  ||||| |||||||| | |||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  19692079 tttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatat 19692178  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||||| ||| | |||||||||||||||||||||| |||||||||| || || | ||||    
T  19692179 aaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccct 19692278  T
Q  207 gattaaattatat 219  Q
    | ||| |||||||    
T  19692279 ggttatattatat 19692291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 38414993 - 38414793
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||| ||||||| |||||||| | |||||||| |||||||||  || ||| ||||||||||||||||||||     
T  38414993 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatac 38414894  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||| ||||||||||         || ||||||||||||| | | | |||||||||||||||||| |||||||||||||||| || |||||||||    
T  38414893 aaatagaacgttgctcttttgcaaaaaaatacgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccct 38414794  T
Q  207 g 207  Q
    |    
T  38414793 g 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 26254030 - 26254167
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggc 158  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| || |    
T  26254030 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatatgttttgattttatcactgac 26254129  T
Q  159 ctcttttcatttccagagccgagcctccgaattctcag 196  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  26254130 ctcttttcattcccaaagccgagcctccgaattctcag 26254167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 10955469 - 10955588
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||  ||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  10955469 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10955568  T
Q  107 aaatagaacattgctctttt 126  Q
    ||||||||||| ||||||||    
T  10955569 aaatagaacatcgctctttt 10955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 24525802 - 24525599
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||| | | ||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  24525802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatat 24525703  T
Q  107 aaatagaacattgctctt---ttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgac 203  Q
    ||||||||||||| | ||              || |||||||||||||||  |||||||||||||| ||||||||||||||||||||||| || ||||||    
T  24525702 aaatagaacattgtttttaaaaaaaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgac 24525603  T
Q  204 cctg 207  Q
    ||||    
T  24525602 cctg 24525599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 48983961 - 48983756
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||| | |||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||    
T  48983961 tttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 48983862  T
Q  107 aaatagaacattgctctttt-----nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||| ||||| | ||||              || ||||||||||||||| |||||||||||||||  |||||||||||||||||||||| || ||||    
T  48983861 aaatagatcattgttttttttaaaaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacg 48983762  T
Q  202 accctg 207  Q
     |||||    
T  48983761 gccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 28749722 - 28749895
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt-nnnnnn 132  Q
    ||||||||||| | |||||| |||  ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||||||||           
T  28749722 tatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctcttttgaaaaaa 28749820  T
Q  133 nnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
       |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| |||| |||| |||||    
T  28749821 aaatatgttttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 8239670 - 8239857
Alignment:
Q  7 tttggtgttaggtgg--gggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaat 104  Q
    |||||||||| ||||  |||||||||| |||||||||| ||| |||||| | | |||||||| ||||||||| |||  || ||||||| |||||||||||    
T  8239670 tttggtgttaagtggaggggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaat 8239769  T
Q  105 ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||||||||||| |||||||         || ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  8239770 ataaatagaacattactcttttaaaaaaaa-tacgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattct 8239857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 207
Target Start/End: Complemental strand, 47985083 - 47984885
Alignment:
Q  11 gtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaatataaa 109  Q
    |||||||||||||||||||||  |||||||| |||| |||||||| | |||||||||||||||||| ||| ||| ||||| |||||||| ||||||||||    
T  47985083 gtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaa 47984984  T
Q  110 tagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    |||||||||||| ||||           | ||||||||||||||| |||| |||||||||| |||||||||||||  |||||||| || |||| |||||    
T  47984983 tagaacattgcttttttaaaaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacggccctg 47984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 25010418 - 25010611
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaa--t 104  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | ||||||||||          || ||| ||||||||||||||||||  |    
T  25010418 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaaaat 25010507  T
Q  105 ataaatagaacattgctcttttnnnnnnnnt-tatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgac 203  Q
    ||||||||| ||||||| ||||          || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| |    
T  25010508 ataaatagatcattgcttttttttttaaaaaatacgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacggc 25010607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 33162415 - 33162338
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  33162415 tttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 9021890 - 9021799
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||| | |||||||| | |||||||||||||||||| |||  |||||||||||||||||||||| ||||||| | |||| |||||    
T  9021890 tatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatagcaaattgttcttt 9021799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 2611326 - 2611260
Alignment:
Q  60 gtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  2611326 gtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 2611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 40357365 - 40357300
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||  |||||||    
T  40357365 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacgacc 40357300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 6765772 - 6765680
Alignment:
Q  33 atatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||||||||| | |||||||| | | ||||| || |||||||  || ||||||||||||||||||||||| |||||||||||||| |||||    
T  6765772 atatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 23744808 - 23744900
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | ||| | || | |||||||||||||||| | ||| ||||||||||||||||||||||| ||| |||||||||| ||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttt 23744900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 7398452 - 7398555
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  |||| |||||| | |||||||| | |||||| | ||||||||  ||| ||||||||||||||| ||||||| |||||||||||||| ||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattgttc 7398551  T
Q  123 tttt 126  Q
    ||||    
T  7398552 tttt 7398555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 36891579 - 36891674
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||  ||||||||||| | |||||||| | | ||||||| ||||||||| ||  ||||||| ||| ||||||||||||||||||||||||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacatt 36891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 27237479 - 27237421
Alignment:
Q  68 catatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  27237479 catatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 27237421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 23859085 - 23859169
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||||| | ||||| || | |||||| ||||||||||| | |  |||||||||||||||||||||| |||||||||||||    
T  23859085 tatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacatt 23859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 36903000 - 36902924
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctt 124  Q
    |||||||| | |||||||  |||||||||  |||||||||||||||| ||||||||| |||||||||||||| ||||    
T  36903000 tttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 12981327 - 12981422
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||| |||||| ||||| | |||||||| |  ||||||||| ||||||  | | ||||||||||||||||||||||  |||||||||||||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacatt 12981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 18201174 - 18201234
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||| |||||||| |||||    
T  18201174 ggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaatagatcattg 18201234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 12419536 - 12419493
Alignment:
Q  83 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||||||||||||||| |||||||||||||| ||||||    
T  12419536 ttgtatttatcttttaaaaaatttaaatagaacattgttctttt 12419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 21763672 - 21763586
Alignment:
Q  39 ggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||| | |||||| | |||||||| |||||||||||   |  |||||||||||||||||||||| ||||||||||| || |||||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaacaatgttcttt 21763586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 9014233 - 9014177
Alignment:
Q  69 atatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||| ||  |||||||||||||||||||||| |||||| ||||||| |||||    
T  9014233 atatatacaacacattgtatttatcttttaaaaaatttaaataaaacattgttcttt 9014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 20153245 - 20153297
Alignment:
Q  66 cgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||||| ||  |||||||||||||||||||||| |||||| ||||||    
T  20153245 cgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacatt 20153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 40357475 - 40357414
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatac 76  Q
    ||||||||||||||||||||||        |||||||||| ||||| |||||||||||||||||||||||    
T  40357475 tttggtgttaggtgggggttcc--------acggtagtcattttcatctcttggtgtaccgcatatatac 40357414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 195
Target Start/End: Complemental strand, 38209708 - 38209520
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  38209708 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 38209609  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctca 195  Q
    |||||||||||||||||||         |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  38209608 aaatagaacattgctctttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagcctccaaattctca 38209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 34768691 - 34768492
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||| ||| |||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  34768691 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 34768592  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         |||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  34768591 aaatagaacattgctcttttaaaaaaaa-tatgttttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccct 34768493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 47128977 - 47129170
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  47128977 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 47129076  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||| ||||||         ||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  47129077 aaatagaacattgttcttttaaaaaaaa-tacattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacg 47129170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 207
Target Start/End: Original strand, 54780771 - 54780968
Alignment:
Q  11 gtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaat 110  Q
    |||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 54780870  T
Q  111 agaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||||||||||||||          || ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||| |||||    
T  54780871 agaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccctg 54780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 32915375 - 32915575
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||| ||| ||| |||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  32915375 tttggtgttaggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatat 32915474  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| ||||||||            ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  32915475 aaatagaacatcgctcttttaaaaaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 32915574  T
Q  207 g 207  Q
    |    
T  32915575 g 32915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 34027569 - 34027768
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||| ||||||| |||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||    
T  34027569 tttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 34027668  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||| ||||         || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  34027669 aaatagaacattgct-ttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 34027767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 43455645 - 43455463
Alignment:
Q  10 ggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaa 109  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  43455645 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaa 43455546  T
Q  110 tagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    |||||||||||||||||         || ||||||||||||||| || |||||||||||| |||||| ||||||||||||||||    
T  43455545 tagaacattgctcttttaaaaataa-tacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattct 43455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 207
Target Start/End: Complemental strand, 2790851 - 2790659
Alignment:
Q  14 ttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 113  Q
    ||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  2790851 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 2790752  T
Q  114 acattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    |||||| ||||||          ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| || |||| |||||    
T  2790751 acattgttcttttaaaaaaaa-aatgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccctg 2790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 32128574 - 32128774
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| || |  ||||||||||||| |||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||    
T  32128574 tttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 32128673  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||||| || ||| |||||||| |||||||||||||||| |||||| || |||| ||||    
T  32128674 aaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccct 32128773  T
Q  207 g 207  Q
    |    
T  32128774 g 32128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 37777340 - 37777156
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||| || ||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  37777340 tttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 37777241  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaatt 191  Q
    |||||||||||| || ||||         || ||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  37777240 aaatagaacattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 37777156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 10978890 - 10979092
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||| ||| ||||||||||||||||||  || |||||||||||||||||||||||||    
T  10978890 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 10978989  T
Q  107 aaatagaacattgctctttt--nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    ||||||||||||||||||||           || ||||||||||||||| |  |||||||||||| |||||||  | ||||||||||||||| |||| ||    
T  10978990 aaatagaacattgctcttttaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggcc 10979089  T
Q  205 ctg 207  Q
    |||    
T  10979090 ctg 10979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 1105522 - 1105709
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| ||||  |||| |||||||| |||||||||| ||||||||||||||||||   | |||||||||||||||||||||||||    
T  1105522 tttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatat 1105621  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctca 195  Q
    |||||||||||  |||||||         || ||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||    
T  1105622 aaatagaacatcactcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 1105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 55255259 - 55255447
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||             | ||| |||||||||||||||||||||||||    
T  55255259 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatat 55255346  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||| |||||||||||||||        ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  55255347 aaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 55255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 19498494 - 19498692
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||| ||||||| |||||||| | | |||||||||||||  | ||| ||| |||||||||||||||||||||    
T  19498494 tttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgcatata--cggcaccttatatttatcttttaaaaaatat 19498591  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||||| |||||| |||||||| | ||||||||||||||||||||| || |||| ||||    
T  19498592 aaatagaacattgctcttttaaacaaaa-tacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccct 19498690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 48209230 - 48209436
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| ||||  |||||||||||||  ||||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  48209230 tttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 48209329  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgat-----tttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgac 200  Q
    ||||||||||||||||||||          || ||||||||     ||||||| ||| ||||||||| | |||||||||||||||||||||||||| |||    
T  48209330 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttaatttatcactggtctcttttcactcccagagccgagcctccgaattctcagggac 48209429  T
Q  201 gaccctg 207  Q
    | |||||    
T  48209430 ggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 5128959 - 5128758
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||| |||||||||  ||||||||||||| |||||||||| |||| || |||||||||| ||| |||||||||||||||||||||||||    
T  5128959 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatat 5128860  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgtttt-gattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    |||||||| || |||||| |          | ||||| |||||||||| ||||||||||||||| |||||||||||||||  ||||||||| |||| |||    
T  5128859 aaatagaatatcgctcttctaaaaaaaaaaacgttttagattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccc 5128760  T
Q  206 tg 207  Q
    ||    
T  5128759 tg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 17679432 - 17679589
Alignment:
Q  49 ttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattt 148  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||         || ||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttttaaaaaaaa-tacgttttgattt 17679530  T
Q  149 tatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||| ||| ||||||||||| ||||| |||||||||||||||||||| |||| |||||    
T  17679531 tatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 16845011 - 16845210
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaata 105  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||  | |||||||  |||||||||  || ||| |||||||||||| ||||||||    
T  16845011 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaata 16845110  T
Q  106 taaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    |||||||||||||||||||||         || ||||||||||||||| ||| || |||||||||||||||||||||||||||||||| || |||| |||    
T  16845111 taaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgg-cttttttcatttccagagccgagcctccgaattcttagggacggccc 16845208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 35465097 - 35465297
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||| |||||||  ||||||||||| | |||||| | | |||||||||||||||||| ||| ||| |||||||||| ||||||||||    
T  35465097 tttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatac-gcaccttttatttatcttgtaaaaaatat 35465195  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||| ||||||| ||||||         |||||||||||||||||| || |||||||||||| |||||  |||||||||||||||||||  | ||||||    
T  35465196 aaatataacattgttcttttaaaaaaaa-tatgttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattctcagaaaggaccct 35465294  T
Q  207 gat 209  Q
    |||    
T  35465295 gat 35465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 37514649 - 37514848
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||| ||| |||  ||||||||||||| ||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  37514649 tttggtgttaggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 37514748  T
Q  107 aaatagaacattgctcttttnnnnnnnnt-tatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||| |||||||           || ||||||||||||||| ||||||||||||||| ||   || |||||||| ||||||||| |||| |||    
T  37514749 aaatagaacatcgctctttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattccc--cgctgagcctccaaattctcagggacggccc 37514846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 16882512 - 16882313
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||| ||||||| || | |||||||||||| |||||||| ||||||||||| ||||| || ||| ||| ||||||||||||||||| |||    
T  16882512 tttggtgttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtat 16882413  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||| | ||||         || ||||||||||||||| || | |||||||||| | ||||||||||||||||||||| || |||| ||||    
T  16882412 aaatagaacattg-ttttttttaaaaaaatacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccct 16882314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 54083359 - 54083176
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||| |||||||||||  ||||||||||||| ||| | || | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  54083359 tttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 54083260  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaatt 191  Q
    ||||||| ||||| | ||||         || ||||||||||||||| || ||||||||||||  ||||||||||||||||||||    
T  54083259 aaatagatcattg-ttttttttaaaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatt 54083176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 10428322 - 10428129
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcac--------ctcttggtgtaccgcatatatacagcatcttgtatttatctttta 98  Q
    ||||||||||||||| |||||||||  ||||||||||||| ||||||        |||| |||||||||||||||||| ||| |||||||||||||||||    
T  10428322 tttggtgttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatctttta 10428223  T
Q  99 aaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctc 194  Q
    |||||||||||||||||||||  |||||         ||  ||||||||||| || || |||||||||||| ||||||||||||||||||||||||    
T  10428222 aaaaatataaatagaacattg--ctttttaaaaaaaataaattttgattttagcactgacctcttttcattcccagagccgagcctccgaattctc 10428129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 13460197 - 13460306
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||||| |  ||||||||||||| |||||| ||| ||| ||||||||||||||  || |||||||||||||||||||||||||    
T  13460197 tttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatat 13460296  T
Q  107 aaatagaaca 116  Q
    ||||||||||    
T  13460297 aaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 40089506 - 40089714
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaa------ 100  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | | |||||||||||||||| ||| ||| |||||||||||||||          
T  40089506 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaatata 40089605  T
Q  101 ---aaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagc 197  Q
       ||||||||||| ||||||||| ||||         || ||||||||||||||| || | |||||||||| | ||||||||||||||||||||| ||     
T  40089606 aataaatataaataaaacattgct-tttttaaaaaaaatacgttttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagg 40089704  T
Q  198 gacgaccctg 207  Q
    ||||||||||    
T  40089705 gacgaccctg 40089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 195
Target Start/End: Complemental strand, 35779442 - 35779257
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||| |||||||||  |||||||||  ||||||||| ||| |||||||| | ||||||||||||||||||  || |||||||||||||||||||||||||    
T  35779442 tttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 35779343  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctca 195  Q
     ||||||||||||||||||          || ||||||||||||||| | ||||||||||||| |  ||| ||| ||||||||||||||    
T  35779342 -aatagaacattgctcttt--aaaaaaaatacgttttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattctca 35779257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 51964739 - 51964884
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt---aaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttg 144  Q
    |||||||||| |||||| ||||||||||| ||| ||||||||||||||||   |||||||||||||||||||||||||||||         || ||||||    
T  51964739 tttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttttaaaaaaaa-tacgttttg 51964837  T
Q  145 attttatcagtggcctcttttcatttccagagccgagcctccgaatt 191  Q
    |||||||||  |||||||||||||| ||||||||||| |||||||||    
T  51964838 attttatcatcggcctcttttcattcccagagccgagtctccgaatt 51964884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 51691982 - 51691913
Alignment:
Q  57 ttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  51691982 ttggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 38352372 - 38352197
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  || |||||||||| |||||||| | ||||||||||          || ||| |||||||||||||||||||||    
T  38352372 tttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 38352283  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||| |||| || ||||         || ||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||    
T  38352282 aaatagatcattact-ttttaaaaaaaaatacgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattct 38352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 23509915 - 23509846
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatac 76  Q
    |||||||||||||||||||||||||  | ||||||||||| |||||||||| ||||||||||||||||||    
T  23509915 tttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 24969427 - 24969536
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | ||||||||||          || ||| |||||||||||||||||||||    
T  24969427 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatat 24969516  T
Q  107 aaatagaacattgctctttt 126  Q
    ||||||| ||||||| ||||    
T  24969517 aaatagatcattgctttttt 24969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 23508553 - 23508418
Alignment:
Q  82 cttgtatttatcttttaaaaaat-ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccga 180  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||          ||  |||||||||||||| ||||||||||||||| ||| ||||||    
T  23508553 cttgtatttatcttttaaaaaattataaatagaacattgctcattaaaaaaaaaatacattttgattttatcactggcctcttttcattcccaaagccga 23508454  T
Q  181 gcctccgaattctcagcgacgaccctgattaaatta 216  Q
    ||||||||||| |||  ||||  |||||||| ||||    
T  23508453 gcctccgaattttcatggacggtcctgattagatta 23508418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 9578728 - 9578662
Alignment:
Q  61 tgtaccgcatatatacagc-atcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||||    
T  9578728 tgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 16922367 - 16922245
Alignment:
Q  86 tatttatcttttaaaaaatataaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcct 184  Q
    |||||||||||||||||||||||||||||||||||||||||           | ||||||||||||||| ||| ||||||||||| ||| || |||||||    
T  16922367 tatttatcttttaaaaaatataaatagaacattgctcttttaaaaataaaaaacgttttgattttatcactggtctcttttcattcccaaagtcgagcct 16922268  T
Q  185 ccgaattctcagcgacgaccctg 207  Q
    || ||||||||| |||| |||||    
T  16922267 ccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 27112036 - 27112132
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    |||||||||  ||||||||||| | |||||| | |||||||| ||||||||||   || ||||||||||||||||||||||| ||||| ||||||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 27112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 52468304 - 52468395
Alignment:
Q  35 atacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||| | |||||||| | | ||||   ||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  52468304 atacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 52468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaata 105  Q
    |||||||||  |||| |||||| | |||||||| | |||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 39655330 - 39655252
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||| | |||||||||||||||| | | |  |||||||||||||||||||||| |||||||||||||| ||||||    
T  39655330 tttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttt 39655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 39329457 - 39329390
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||| | |||||||||| || ||||||||||||||||||||||| |||| ||||||||| ||||||    
T  39329457 ggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattgttctttt 39329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 24969718 - 24969787
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctga 208  Q
    |||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| || |||| ||||||    
T  24969718 gttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctga 24969787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 36118548 - 36118463
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||||||| | |||||  | | |||||| | |||||||||  || ||||||||||||||||||||||| ||||||||||||||    
T  36118548 tatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 36118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 36178689 - 36178774
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    |||| |||||| | |||||| | | |||||| |||||||||||  || ||||||||||||||||||| ||| ||||||||||||||    
T  36178689 tataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattg 36178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 2135422 - 2135326
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||||| ||||||| |||| |  || |||| | | |||| |||||||||||  || ||||||||||||||||||||||| ||||||||| ||||    
T  2135422 ggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattg 2135326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 10042090 - 10041998
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | |||||| | | |||||| | |||| |||| ||| ||||||||||| |||| |||||| |||||||||||||| ||||||    
T  10042090 tatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacattgttctttt 10041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 2975413 - 2975358
Alignment:
Q  136 tatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaatt 191  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||| | ||||||    
T  2975413 tatgttttgattttatcattgacctcttttcattttcagagccgagcattcgaatt 2975358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 24396940 - 24397043
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  |||||| |||| | |||||||| |  ||||| | ||||||||| ||| ||| ||||||||||||||||||| |||||| || |||| ||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaataaaatattgttc 24397039  T
Q  123 tttt 126  Q
    ||||    
T  24397040 tttt 24397043  T

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Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 24614018 - 24614061
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacattgttcttt 24614061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 30507162 - 30507120
Alignment:
Q  84 tgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttctttt 30507120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 116
Target Start/End: Original strand, 15735154 - 15735189
Alignment:
Q  81 tcttgtatttatcttttaaaaaatataaatagaaca 116  Q
    |||||||||||||||||||||||| |||||||||||    
T  15735154 tcttgtatttatcttttaaaaaatttaaatagaaca 15735189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 36362928 - 36362869
Alignment:
Q  67 gcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||| |||  |||||||||||||||||||||| |||| ||| ||||| ||||||    
T  36362928 gcatatatacggcactttgtatttatcttttaaaaaatttaaacagagcattgttctttt 36362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 37745011 - 37744916
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaatataaatagaacat 117  Q
    |||||||||  ||||||||||| | |||||||| | | |||| ||||||||| |  || ||| |||||||||||||| ||||| ||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 9578625 - 9578573
Alignment:
Q  157 gcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctgat 209  Q
    ||||||||||| | |||||| ||||||||||||||||||  |||| |||||||    
T  9578625 gcctcttttcactcccagagtcgagcctccgaattctcaaggacggccctgat 9578573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 44655737 - 44655937
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||||| ||||||||||||||||||  || |||||||||||||||||||||||||    
T  44655737 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 44655836  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||        ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  44655837 aaatagaacattgctctttt-aaaaaaattatgttttgattttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacggccct 44655935  T
Q  207 ga 208  Q
    ||    
T  44655936 ga 44655937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 14146296 - 14146495
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  14146296 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 14146395  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| ||||||||         || ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| |||| ||||    
T  14146396 aaatagaacatcgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggccct 14146494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 5027545 - 5027746
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  5027545 tttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5027644  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||||||||||||||||          || ||||||||||||||| ||||||||||||||| || ||| ||||||||||||||||||| |||| |||    
T  5027645 aaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggccc 5027744  T
Q  206 tg 207  Q
    ||    
T  5027745 tg 5027746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 16140055 - 16140247
Alignment:
Q  11 gtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaat 110  Q
    ||||||||||||| |||||||  ||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  16140055 gtgttaggtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaat 16140154  T
Q  111 agaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    |||||||  |||||||         || |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||||    
T  16140155 agaacatcactcttttaaaaaaaa-tacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacgacc 16140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 196
Target Start/End: Original strand, 23185423 - 23185611
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  23185423 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 23185522  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    ||||||||||||||||||||         || ||||||||||||||| ||||||||||||| | |  |||||||||||||||||||||||    
T  23185523 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcag 23185611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 50881426 - 50881618
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||| |||||||||  ||||| ||||||| |||||||||| | ||||||||||||||||  || |||||||||||||||||||||||||    
T  50881426 tttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat 50881525  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||||||||||         ||  |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  50881526 aaatagaacattgctcttttaaaaaaa--tagattttaattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacg 50881618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 17168952 - 17169152
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||| |||||||||||  |||| |||||||| |||||||| | ||||||||||||||||||| || ||| |||||||||||||||||||||    
T  17168952 tttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatat 17169051  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||| ||||         || ||||||||||||||| || |||||||||||||||||||||||||||||||||||| || |||| ||||    
T  17169052 aaatagaacattgct-ttttttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccct 17169150  T
Q  207 ga 208  Q
    ||    
T  17169151 ga 17169152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 5316676 - 5316875
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  5316676 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5316775  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||||| || |||||||||||| | |  | ||||||||| ||||||||| |||| ||||    
T  5316776 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccct 5316874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 6771787 - 6771989
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||| ||||||||   ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6771787 tttggtgttaggtggaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 6771886  T
Q  107 aaatagaacattgctcttt--tnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    ||||||||||| |||||||             | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||    
T  6771887 aaatagaacatcgctctttaaaaaaaaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggcc 6771986  T
Q  205 ctg 207  Q
    |||    
T  6771987 ctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 210
Target Start/End: Complemental strand, 4971735 - 4971533
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||||||| | | |||||||||||||||||||||||||    
T  4971735 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 4971636  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||||||||||||||| |||         |||||||||||||||||| ||| ||||||||||| || || ||||||||| |||||||||| |||  ||||    
T  4971635 aaatagaacattgctc-tttaaaaaaaaatatgttttgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccct 4971537  T
Q  207 gatt 210  Q
    ||||    
T  4971536 gatt 4971533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 19955713 - 19955898
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||||||| | | ||| |||||||||||||||||||||    
T  19955713 tttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatat 19955812  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||| ||||||| ||||         |  ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  19955813 aaatagatcattgct-ttttaaaaaaaaattcgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattct 19955898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 27906834 - 27906646
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||             | ||| |||||||||||||||||||||||||    
T  27906834 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgg------------cggcaccttgtatttatcttttaaaaaatat 27906747  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||| |||||||||||||||        ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  27906746 aaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccct 27906647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 196
Target Start/End: Original strand, 3406414 - 3406603
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||   |||||| |||||||||| ||| |||||||||||||||||||||||||    
T  3406414 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3406513  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    ||||||||||| ||||||||          | ||||| ||||||||| || |||||||||||| || |||| |||||||| |||||||||    
T  3406514 aaatagaacatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcag 3406603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 3440406 - 3440217
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||   |||||| |||||||||| ||| |||||||||||||||||||||||||    
T  3440406 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatat 3440307  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    ||||||||||| ||||||||          | ||||| ||||||||| || |||||||||||| || |||| |||||||| |||||||||    
T  3440306 aaatagaacatcgctcttttaaaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcag 3440217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 9173140 - 9172940
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | | |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  9173140 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9173041  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||| | |||          ||  |||| | |||||||  |||||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  9173040 aaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9172941  T
Q  207 g 207  Q
    |    
T  9172940 g 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 9181122 - 9180922
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | | |||||||||||||||| ||| ||| |||||||||||||||||||||    
T  9181122 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 9181023  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||| | |||          ||  |||| | |||||||  |||||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  9181022 aaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 9180923  T
Q  207 g 207  Q
    |    
T  9180922 g 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 22865536 - 22865378
Alignment:
Q  48 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgatt 147  Q
    |||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||         || |||||||||    
T  22865536 tttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttgaaaaaaaatacgttttgatt 22865438  T
Q  148 ttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    |||||| || |||||||||||| ||||||||| |||||||||||||||| |||| |||||    
T  22865437 ttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 192
Target Start/End: Complemental strand, 1366995 - 1366812
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||||||||||||   ||||||||||||| ||||| || | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  1366995 tttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 1366896  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattc 192  Q
    ||||||||||||||||  ||         |||||||| | ||||||| ||||||||||||||| ||||||| |||||||| |||||    
T  1366895 aaatagaacattgctc--ttaaaaaaaaatatgttttcaatttatcactggcctcttttcattcccagagctgagcctccaaattc 1366812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 214
Target Start/End: Complemental strand, 40501907 - 40501700
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||||| ||||| |||  ||||||||||||| ||| |||| | ||||||||||||||||||  || ||| |||||||||||||||||||||    
T  40501907 tttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 40501808  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||| |||| || ||||         || ||||||||||||||| || ||||||||||||  ||||| |||||||||||||||| || |||| ||||    
T  40501807 aaatagatcattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccct 40501708  T
Q  207 gattaaat 214  Q
    ||| ||||    
T  40501707 gataaaat 40501700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 41697254 - 41697072
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||| ||| | ||||| ||||||||||   |  ||||||||||||||||||||||||    
T  41697254 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatat 41697155  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaat 190  Q
    ||||||||||| ||||||||         || ||||||||||||||| || |||||||||||| |||||||||||| |||||||    
T  41697154 aaatagaacatcgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 27559635 - 27559752
Alignment:
Q  9 tggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataa 108  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||||    
T  27559635 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataa 27559734  T
Q  109 atagaacattgctctttt 126  Q
    ||||||||||||| ||||    
T  27559735 atagaacattgctttttt 27559752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 195
Target Start/End: Complemental strand, 21741027 - 21740864
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt--nnnnn 131  Q
    |||| |||||||| |||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||           
T  21741027 tatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaaaaaa 21740928  T
Q  132 nnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctca 195  Q
        ||  |||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  21740927 aaaatacattttgattttatcactggcctcttttcattctcagagccgagcctccgaattctca 21740864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 13913599 - 13913394
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatata--cagcatcttgtatttatcttttaaaaaat 104  Q
    |||||||||||||||||||| ||||  ||||||||||||| |||||| | | |||||||||||||||||  | ||| ||| |||||||||||||||||||    
T  13913599 tttggtgttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaat 13913500  T
Q  105 ataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    ||||||||| ||||||| ||||         ||  |||||||||||||| |||| ||||||||||  ||||||| |||||||||||||| || |||| ||    
T  13913499 ataaatagatcattgct-tttttaaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggcc 13913401  T
Q  205 ctgatta 211  Q
     ||||||    
T  13913400 ttgatta 13913394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 51607557 - 51607374
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacag-catcttgtatttatcttttaaaaaata 105  Q
    |||||| |||| |||| ||||||||  ||||||||||||| |||||| | | |||||||||||||||||| | || ||| ||||||||||||||||||||    
T  51607557 tttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaata 51607458  T
Q  106 taaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaatt 191  Q
    |||||| ||||||  | ||||         || ||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  51607457 taaataaaacatt--ttttttttaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 51607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 6889633 - 6889789
Alignment:
Q  33 atatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnn 132  Q
    |||||||| | ||| |||||||||| | ||||||||||||||||   |  ||||||||||||||||||||||||||||||||||||||||||||          
T  6889633 atatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaa 6889732  T
Q  133 nnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaatt 191  Q
       || ||||||||||||||| || ||||||||||||  |||| |||||||||||||||    
T  6889733 a--tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaatt 6889789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 6891479 - 6891635
Alignment:
Q  33 atatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnn 132  Q
    |||||||| | ||| |||||||||| | ||||||||||||||||   |  ||||||||||||||||||||||||||||||||||||||||||||          
T  6891479 atatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaa 6891578  T
Q  133 nnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaatt 191  Q
       || ||||||||||||||| || ||||||||||||  |||| |||||||||||||||    
T  6891579 a--tacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaatt 6891635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 38547101 - 38547035
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  38547101 ggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgatcttt 38547035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 34247154 - 34247219
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||  |||||||    
T  34247154 gttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacgacc 34247219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 39134824 - 39134720
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatc-ttttaaaaaatataaatagaacattgct 121  Q
    |||||||||  ||||| ||||| | | |||||| | ||||||  |||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattgtt 39134725  T
Q  122 ctttt 126  Q
    |||||    
T  39134724 ctttt 39134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 45758506 - 45758609
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||||| | |||||||| | | ||||   |||||||||| || |||| |||||||||||||||||| |||||||||||||| ||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacattgttc 45758605  T
Q  123 tttt 126  Q
    ||||    
T  45758606 tttt 45758609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 33170782 - 33170867
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||||||| | |||||||  ||||||||||||||||||||| ||  |||||||||  ||||||||||| |||||| |||||||    
T  33170782 tatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacattg 33170867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 209
Target Start/End: Original strand, 44895648 - 44895845
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||| ||| |||||||| | ||||||||      |  |  || ||| |||||||||||||||||||||    
T  44895648 tttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtacc------acccgccaccttatatttatcttttaaaaaatat 44895741  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccc 205  Q
    ||||||| ||||| | ||||          |||||||||||||| |||  | |||||||||||| ||||| |||| |||||||||| | || ||| ||||    
T  44895742 aaatagatcattgtttttttaaaaaaaaaatatgttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatttttagagacaaccc 44895841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 6221690 - 6221791
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    ||||||||| ||||||| || | | |||||| | ||| |||||||| ||||||| |||  ||||||||||||||| |||||| |||||||||||||| ||    
T  6221690 ggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaacattgttc 6221788  T
Q  123 ttt 125  Q
    |||    
T  6221789 ttt 6221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 26803994 - 26804059
Alignment:
Q  60 gtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||| |||||||||||  |||||||||||||||||||||||||| |||||| | ||||| |||||    
T  26803994 gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaatatagcattgttcttt 26804059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 17322664 - 17322621
Alignment:
Q  83 ttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    |||||||||||||| |||||||||||||||||||||| ||||||    
T  17322664 ttgtatttatctttaaaaaaatataaatagaacattgttctttt 17322621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 43235871 - 43235774
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttt--taaaaaatataaatagaacatt 118  Q
    |||||||||  |||||| |||| | |||||||| | |||||||  |||||||||  ||||||||||||||||||   ||||||| |||||||||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatt 43235774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 34247044 - 34247105
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatac 76  Q
    ||||||||||||||||||||||        |||||||||| ||||| |||||||||||||||||||||||    
T  34247044 tttggtgttaggtgggggttcc--------acggtagtcattttcatctcttggtgtaccgcatatatac 34247105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 38853545 - 38853637
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | |||||||| | | | |||  |||||||||  || |||||||||||| |||||||||| ||||||||||| || ||||||    
T  38853545 tatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaacactgttctttt 38853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 5533326 - 5533428
Alignment:
Q  25 ttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaatataaatagaacattgctct 123  Q
    |||||||  ||||||||||| | |||||||| |   |||||  ||||||||| ||| ||||| |||||||||| ||||||| ||||||||| |||| |||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattgttct 5533425  T
Q  124 ttt 126  Q
    |||    
T  5533426 ttt 5533428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 35392295 - 35392376
Alignment:
Q  36 tacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||| | |||||||| | | | |||||||||||||| ||| ||||||||||||  ||||||||| |||||| ||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacatt 35392376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 50146424 - 50146476
Alignment:
Q  140 ttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattc 192  Q
    |||| |||||||||  || ||| |||||||| |||||||||||||||||||||    
T  50146424 tttttattttatcatgggtctcgtttcatttacagagccgagcctccgaattc 50146476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 7e-64; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 2952339 - 2952137
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| |||| |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  2952339 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatat 2952240  T
Q  107 aaatagaacattgctctttt--nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgacc 204  Q
    ||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  2952239 aaatagaacattgctctttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 2952140  T
Q  205 ctg 207  Q
    |||    
T  2952139 ctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 30883314 - 30883509
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  30883314 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatat 30883413  T
Q  107 aaatagaacattgctctttt-nnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  30883414 aaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcagggacg 30883509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 3048635 - 3048435
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||| |||||||||   ||||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  3048635 tttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 3048536  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||||| | |||||||||||        ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  3048535 aaatagtatattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagagacggccct 3048436  T
Q  207 g 207  Q
    |    
T  3048435 g 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 13534804 - 13534612
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  13534804 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13534706  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||||||||||         || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||    
T  13534705 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacg 13534612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 13624344 - 13624152
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  13624344 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatat 13624246  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacg 201  Q
    ||||||||||||||||||||         || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||    
T  13624245 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacg 13624152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 7 - 196
Target Start/End: Original strand, 45475802 - 45475990
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  45475802 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 45475901  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    ||||||||||||||||||||         || ||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  45475902 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggcctcttttcattccccgagccgagcctccgaattctcag 45475990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 7 - 211
Target Start/End: Complemental strand, 23606747 - 23606544
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  23606747 tttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23606648  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||||||||||         || ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| || |||| ||||    
T  23606647 aaatagaacattgctcttttaaaaaaaa-tacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccct 23606549  T
Q  207 gatta 211  Q
    |||||    
T  23606548 gatta 23606544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 5860862 - 5860671
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    ||||||||||||| |||||| ||||  |||| |||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  5860862 tttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatat 5860763  T
Q  107 aaatagaacattgctcttt--tnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcag 196  Q
    |||||||||||||||||||           ||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  5860762 aaatagaacattgctctttaaaaataaatattatgttttgattttatcattgacctcttttcatttccagagccgagcctccaaattctcag 5860671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 37430276 - 37430076
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||| ||| ||||||||||  ||||||||||||| ||| |||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  37430276 tttggtgttacgtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatat 37430177  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||| ||||||||          | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  37430176 aaatagaacatcgctcttttaaaaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccct 37430077  T
Q  207 g 207  Q
    |    
T  37430076 g 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 208
Target Start/End: Complemental strand, 23798379 - 23798178
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  23798379 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 23798280  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||||||||||||||||||          || ||||||||||||||| || ||||||||| || ||||||||||||||||||||||| || |||| ||||    
T  23798279 aaatagaacattgctctttaaaaaaaatatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccct 23798180  T
Q  207 ga 208  Q
    ||    
T  23798179 ga 23798178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 42600767 - 42600967
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||||| ||||||||| ||| ||| |||||||||||||||||||||    
T  42600767 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatat 42600866  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||| ||||||| ||||          | ||||||||||||||| || ||||||||||||| |||||||||||||||||||||| || |||| ||||    
T  42600867 aaatagatcattgcttttttaaaaaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccct 42600966  T
Q  207 g 207  Q
    |    
T  42600967 g 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 193
Target Start/End: Original strand, 10917376 - 10917561
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  10917376 tttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatat 10917475  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattct 193  Q
    ||||||| ||||| | ||||         || ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  10917476 aaatagatcattg-ttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattct 10917561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 41879166 - 41879364
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||| ||||  ||| ||||||||| |||||||| | | |||||||||||||||| | | |||||||||||||||||||||||||    
T  41879166 tttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatat 41879265  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||| ||||||         || ||||| ||||||||| |  |||||||||||| |||||||||||||| ||||||||||| |||| ||||    
T  41879266 aaatagaacattgttcttttaaaaaaa--tacgttttaattttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccct 41879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 8102913 - 8103008
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||  ||||||||| | | |||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacatt 8103008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 7944624 - 7944521
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||||| | |||||||| | |||||||  ||||||||| ||| ||||||||||| ||||||||||| |||||| ||||||| ||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattgttc 7944525  T
Q  123 tttt 126  Q
    ||||    
T  7944524 tttt 7944521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 41677276 - 41677106
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaatataaatagaacattgct 121  Q
    |||||||||  ||||| ||||| | |||||||| | | |||| |||||||||||  ||||||||||||||||||||| ||||| |||||||||||||| |    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattgtt 41677177  T
Q  122 cttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattc 192  Q
    |||||         || ||||| ||||||| |  || ||||||||| |  |||||||||||||||||||||    
T  41677176 cttttaaaaaaaaatacgtttttattttattataggtctcttttcactcacagagccgagcctccgaattc 41677106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaa 103  Q
    |||||||||  ||||||||||| | |||||||| | ||||||||||| ||||||  |||||||||||||||||||||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 20003796 - 20003728
Alignment:
Q  139 gttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccctg 207  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||| ||||||||| |||| |||||    
T  20003796 gttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 15167517 - 15167414
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  |||||| |||| | |||||| | | |||||| |||||||||||| ||  || ||||||||||||||||||| |||||||||||||| ||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattgttc 15167418  T
Q  123 tttt 126  Q
    ||||    
T  15167417 tttt 15167414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 5973198 - 5973106
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||| | | ||||| || | |||||||  |||||||||  || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  5973198 tatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 5973106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 11290196 - 11290288
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | |||||||| |  ||||||  |||||||||  || ||||||||||||||||||||||| |||||| ||||||| ||||||    
T  11290196 tatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattgttctttt 11290288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 34789953 - 34789861
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | |||||||| | |||||||  |||||||||  ||||||||||||||||||||| | || |||||||||||| | ||||||    
T  34789953 tatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttctttt 34789861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 15078759 - 15078854
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||  |||||| |||| | |||||| | | ||||||  |||||||||||||| ||| ||||||||||||||||| | |||||||||||||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 15078854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 5721560 - 5721654
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 117  Q
    |||||||||  ||||||||||| | |||||| | | |||||||||  ||||||  ||| ||||||||||||||||||||||  ||||||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 39332507 - 39332405
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctc 122  Q
    |||||||||  ||||||||||| | |||||||| | | |||||||| ||||||   || |||||||||||||||| |||||  |||||||||||||| ||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacattgttc 39332408  T
Q  123 ttt 125  Q
    |||    
T  39332407 ttt 39332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 8646265 - 8646309
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||    
T  8646265 cttgtatttatcttttaaaaaatttaaatagaacattgttctttt 8646309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 9108553 - 9108596
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  9108553 cttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 30674468 - 30674403
Alignment:
Q  60 gtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||| |||||||||||  || ||| |||||||||||||||| || |||||||||||||| |||||    
T  30674468 gtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattgttcttt 30674403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 34868220 - 34868184
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||||||||||||||||| |||||||||||||    
T  34868220 cttgtatttatcttttaaaaaatttaaatagaacatt 34868184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 23941134 - 23941097
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  23941134 cttgtatttatcttttaaaaaatttaaataaaacattg 23941097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 25561553 - 25561502
Alignment:
Q  66 cgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    ||||||||||| ||| |||||||||||| ||||||| || |||||||||||||    
T  25561553 cgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaacatt 25561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 38009191 - 38009151
Alignment:
Q  86 tatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||||||||| | |||||||||||||| ||||||    
T  38009191 tatttatcttttaaaaattttaaatagaacattgttctttt 38009151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 1328 - 1527
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  1328 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatat 1427  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    |||||||||| |||||||||         || ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  1428 aaatagaacagtgctcttttaaaaaaaa-tacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccct 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 207
Target Start/End: Original strand, 106523 - 106723
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatat 106  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||    
T  106523 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatat 106622  T
Q  107 aaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagcctccgaattctcagcgacgaccct 206  Q
    ||||||||||||| ||||||         || ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| || |||| ||||    
T  106623 aaatagaacattgttcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccct 106722  T
Q  207 g 207  Q
    |    
T  106723 g 106723  T

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Target: scaffold1590 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 349 - 257
Alignment:
Q  34 tatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctctttt 126  Q
    ||||||||||| | |||||| | | ||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||| ||||||    
T  349 tatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttt 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 173612 - 173516
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    |||||||||| ||||||||||| | ||| |||| | |||||| ||||||||||| | | ||||||||||||||||||||||| ||||||||||||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattg 173516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 183121 - 183244
Alignment:
Q  83 ttgtatttatcttttaaaaaatataaatagaacattgctcttttnnnnnnnnttatgttttgattttatcagtggcctcttttcatttccagagccgagc 182  Q
    |||||||||||||||||||||||||||||||||||  |||||||        | | ||||| ||||||||| ||||||||||||||| ||||||||||||    
T  183121 ttgtatttatcttttaaaaaatataaatagaacatctctcttttaaaaaaaat-acgttttaattttatcactggcctcttttcattcccagagccgagc 183219  T
Q  183 ctccgaattctcagcgacgaccctg 207  Q
    ||| ||||| |||| |||| |||||    
T  183220 ctctgaattttcagggacggccctg 183244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 181904 - 181969
Alignment:
Q  7 tttggtgttaggtgggggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatat 72  Q
    ||||||||||| |||||||||||||  ||||||||||||| |||||||||| | ||||||||||||    
T  181904 tttggtgttagatgggggttcctcatgtatacggtagtcattttcacctctggatgtaccgcatat 181969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 38926 - 39022
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattg 119  Q
    ||||||||| |||||||||||| | |||||| | |  ||||| |||||||||||  || ||||||||||||||||||||||| ||||||||||||||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 39022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 206591 - 206496
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||  ||||||||||| | |||||||  | ||||||||||||||||||  || ||||||||||||||||| ||||| |||||||||||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacatt 206496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 24059 - 23993
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||||||||||  || ||||||||||||||||||||||| ||||||||| |||| |||||    
T  24059 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgttcttt 23993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 118
Target Start/End: Original strand, 1355 - 1450
Alignment:
Q  23 ggttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatt 118  Q
    |||||||||  |||||| |||| | |||||| | | ||||||  |||||||||||||| ||| ||||||||||||||||| | |||||||||||||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 230960 - 230858
Alignment:
Q  24 gttcctcacatatacggtagtcactttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacattgctct 123  Q
    ||||||||  |||| |||||| | |||||||| | ||| || |||||||||||| || |||  ||||||||||||| |||| |||||||||||||| |||    
T  230960 gttcctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacattgttct 230861  T
Q  124 ttt 126  Q
    |||    
T  230860 ttt 230858  T

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Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 16125 - 16168
Alignment:
Q  82 cttgtatttatcttttaaaaaatataaatagaacattgctcttt 125  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  16125 cttgtatttatcttttaaaaaatttaaatagaacatttctcttt 16168  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 40122 - 40191
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaata--taaatagaacattgctctttt 126  Q
    |||||||  |||| |||| ||| |||||||||||||||||||||| |  |||||||||||||| ||||||    
T  40122 ggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttctttt 40191  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 138182 - 138251
Alignment:
Q  59 ggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaata--taaatagaacattgctctttt 126  Q
    |||||||  |||| |||| ||| |||||||||||||||||||||| |  |||||||||||||| ||||||    
T  138182 ggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttctttt 138251  T

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