View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8912A_low_221 (Length: 253)
Name: NF8912A_low_221
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8912A_low_221 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 27895844 - 27895600
Alignment:
| Q |
1 |
atatttgtttattcaaaaagaagggaggtttaggtgtgagagatattaggaagatcgatttgagccttttggcaaagtggatatggaggttgattcaaga |
100 |
Q |
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| T |
27895844 |
atatttgtttattcaaaaagaagggaggtttaggtgtgagagatattaggaagatcgatttgagccttttggtaaagtggatatggaggttgattcaaga |
27895745 |
T |
|
| Q |
101 |
tgatgagtcgttgtgaaaggatgttctagtgggaaaatatgaagatagtaattagcggagtgggctgggccatcgttgacatcttattggtggaaggact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27895744 |
tgatgagtcgttgtgaaaggatgttctagtgggaaaatatagagatagtaattagcggagtgggctgggccatcgttgacatcttattggtggaaggact |
27895645 |
T |
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| Q |
201 |
cgtcgtcattggaggtttcataaaaggttaattggttcaacacca |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27895644 |
cgtcgtcattggaggtttcataaaaggttaattggttcaacacca |
27895600 |
T |
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