View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_241 (Length: 249)

Name: NF8912A_low_241
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_241
NF8912A_low_241
[»] chr1 (38 HSPs)
chr1 (27-232)||(8275954-8276159)
chr1 (27-198)||(38056671-38056842)
chr1 (89-198)||(28476733-28476842)
chr1 (114-198)||(50544841-50544925)
chr1 (107-199)||(24719509-24719600)
chr1 (107-198)||(12710829-12710920)
chr1 (111-197)||(22145666-22145752)
chr1 (107-198)||(24007224-24007315)
chr1 (47-109)||(4595933-4595995)
chr1 (134-198)||(17901793-17901857)
chr1 (121-198)||(6834152-6834229)
chr1 (34-198)||(8306494-8306659)
chr1 (107-198)||(39061283-39061373)
chr1 (134-198)||(34392757-34392821)
chr1 (137-198)||(635003-635064)
chr1 (134-198)||(35895088-35895152)
chr1 (45-106)||(51324405-51324466)
chr1 (134-198)||(45499531-45499595)
chr1 (107-198)||(21188033-21188123)
chr1 (68-107)||(44822110-44822149)
chr1 (61-107)||(7320683-7320729)
chr1 (68-107)||(7052011-7052050)
chr1 (159-198)||(7703136-7703175)
chr1 (74-197)||(19676641-19676763)
chr1 (107-198)||(20708058-20708148)
chr1 (107-149)||(40390112-40390155)
chr1 (117-155)||(14792604-14792642)
chr1 (143-197)||(20588636-20588690)
chr1 (143-197)||(20593174-20593228)
chr1 (117-155)||(21243799-21243837)
chr1 (107-155)||(18121565-18121614)
chr1 (74-107)||(20633723-20633756)
chr1 (107-155)||(38887128-38887177)
chr1 (145-198)||(42913049-42913102)
chr1 (134-198)||(12327742-12327806)
chr1 (145-197)||(21046049-21046101)
chr1 (47-103)||(42912952-42913008)
chr1 (134-198)||(51336468-51336532)
[»] chr4 (36 HSPs)
chr4 (27-198)||(9638892-9639063)
chr4 (89-198)||(14631079-14631188)
chr4 (107-198)||(16296900-16296991)
chr4 (89-198)||(25513795-25513904)
chr4 (91-191)||(35660902-35661002)
chr4 (89-199)||(26446151-26446261)
chr4 (107-197)||(33186864-33186955)
chr4 (107-197)||(12424290-12424383)
chr4 (107-199)||(2424385-2424477)
chr4 (131-198)||(15239815-15239882)
chr4 (137-208)||(13847193-13847264)
chr4 (119-183)||(15747787-15747851)
chr4 (119-180)||(17142996-17143057)
chr4 (107-198)||(14477594-14477684)
chr4 (107-198)||(18462986-18463076)
chr4 (134-198)||(9622478-9622542)
chr4 (134-198)||(10273372-10273436)
chr4 (134-198)||(55583185-55583249)
chr4 (107-155)||(12623278-12623327)
chr4 (107-155)||(19565959-19566008)
chr4 (145-198)||(37019670-37019723)
chr4 (107-155)||(45314124-45314173)
chr4 (108-155)||(26921550-26921598)
chr4 (145-198)||(15115222-15115275)
chr4 (74-107)||(16998455-16998488)
chr4 (179-216)||(19739772-19739809)
chr4 (74-107)||(25091583-25091616)
chr4 (179-216)||(27996825-27996862)
chr4 (122-155)||(46741177-46741210)
chr4 (74-107)||(53630563-53630596)
chr4 (145-197)||(11425943-11425995)
chr4 (79-107)||(14549695-14549723)
chr4 (145-197)||(19610324-19610376)
chr4 (145-197)||(25091653-25091705)
chr4 (145-197)||(42875797-42875849)
chr4 (145-197)||(53630474-53630526)
[»] scaffold0220 (2 HSPs)
scaffold0220 (29-216)||(13833-14019)
scaffold0220 (144-210)||(19953-20019)
[»] scaffold0328 (1 HSPs)
scaffold0328 (27-198)||(18639-18811)
[»] chr3 (55 HSPs)
chr3 (27-198)||(14641547-14641718)
chr3 (89-198)||(17208468-17208577)
chr3 (34-210)||(14152386-14152562)
chr3 (107-198)||(14520408-14520499)
chr3 (109-198)||(29907603-29907692)
chr3 (109-198)||(29948769-29948858)
chr3 (109-198)||(29997923-29998012)
chr3 (107-197)||(5215608-5215699)
chr3 (108-198)||(15566706-15566797)
chr3 (134-198)||(22841278-22841342)
chr3 (121-190)||(45803338-45803407)
chr3 (119-183)||(2247880-2247944)
chr3 (91-198)||(3160626-3160732)
chr3 (92-198)||(21845651-21845756)
chr3 (134-198)||(2841505-2841569)
chr3 (47-107)||(11563628-11563687)
chr3 (134-197)||(54875474-54875537)
chr3 (88-210)||(16050871-16050992)
chr3 (107-157)||(48631294-48631344)
chr3 (57-107)||(49968948-49968998)
chr3 (54-107)||(9511005-9511058)
chr3 (54-107)||(9518980-9519033)
chr3 (121-198)||(12917305-12917382)
chr3 (134-198)||(3527156-3527220)
chr3 (134-198)||(6156700-6156763)
chr3 (134-198)||(6159394-6159458)
chr3 (107-208)||(17684824-17684926)
chr3 (135-199)||(24548952-24549016)
chr3 (91-136)||(13520404-13520449)
chr3 (107-155)||(53646100-53646149)
chr3 (107-155)||(54330348-54330397)
chr3 (134-198)||(14442164-14442228)
chr3 (145-197)||(17539106-17539158)
chr3 (47-107)||(50348115-50348175)
chr3 (107-198)||(6003148-6003238)
chr3 (107-198)||(50350815-50350908)
chr3 (144-198)||(33565086-33565140)
chr3 (74-107)||(10563638-10563671)
chr3 (47-103)||(14508749-14508806)
chr3 (74-107)||(17044896-17044929)
chr3 (74-107)||(17518962-17518995)
chr3 (74-107)||(17533824-17533857)
chr3 (145-198)||(24177735-24177788)
chr3 (134-199)||(24547189-24547254)
chr3 (74-107)||(40807926-40807959)
chr3 (145-198)||(40807996-40808049)
chr3 (145-198)||(44274418-44274471)
chr3 (74-107)||(49900660-49900693)
chr3 (177-225)||(325110-325158)
chr3 (145-197)||(11259431-11259483)
chr3 (145-197)||(17044966-17045018)
chr3 (145-197)||(17047126-17047178)
chr3 (145-197)||(17541434-17541486)
chr3 (145-197)||(22306583-22306635)
chr3 (71-107)||(42324061-42324097)
[»] chr6 (37 HSPs)
chr6 (27-198)||(19825485-19825656)
chr6 (89-232)||(15998833-15998976)
chr6 (107-199)||(21683073-21683164)
chr6 (109-198)||(18982536-18982625)
chr6 (47-119)||(17318200-17318272)
chr6 (107-198)||(23658050-23658142)
chr6 (109-197)||(20410512-20410600)
chr6 (134-198)||(29045260-29045324)
chr6 (107-198)||(1818915-1819005)
chr6 (91-198)||(34140455-34140560)
chr6 (107-157)||(24506155-24506205)
chr6 (45-107)||(28948475-28948537)
chr6 (134-198)||(10446206-10446270)
chr6 (74-198)||(15890711-15890834)
chr6 (107-210)||(31734669-31734772)
chr6 (91-198)||(34153071-34153176)
chr6 (61-107)||(23501588-23501634)
chr6 (107-155)||(7217285-7217333)
chr6 (109-152)||(18982379-18982422)
chr6 (179-232)||(16966800-16966853)
chr6 (179-232)||(18259139-18259192)
chr6 (107-155)||(22557210-22557259)
chr6 (107-198)||(25921963-25922054)
chr6 (68-103)||(18585729-18585764)
chr6 (120-198)||(13285723-13285801)
chr6 (57-107)||(19401007-19401057)
chr6 (74-107)||(7827902-7827935)
chr6 (179-216)||(20183754-20183791)
chr6 (179-216)||(22152200-22152237)
chr6 (74-107)||(23150376-23150409)
chr6 (107-155)||(23431488-23431537)
chr6 (74-107)||(27330070-27330103)
chr6 (74-107)||(27390810-27390843)
chr6 (145-197)||(7827972-7828024)
chr6 (144-208)||(12041609-12041673)
chr6 (145-197)||(19655231-19655283)
chr6 (145-197)||(23150287-23150339)
[»] chr7 (58 HSPs)
chr7 (68-198)||(708428-708558)
chr7 (91-198)||(19195558-19195664)
chr7 (107-199)||(43745618-43745710)
chr7 (89-198)||(15575648-15575757)
chr7 (109-210)||(8513740-8513842)
chr7 (89-198)||(20252181-20252290)
chr7 (27-102)||(17070384-17070459)
chr7 (107-198)||(47095414-47095505)
chr7 (109-210)||(8488081-8488183)
chr7 (89-199)||(4690661-4690771)
chr7 (89-198)||(18874664-18874772)
chr7 (135-198)||(38299738-38299801)
chr7 (107-197)||(43276744-43276834)
chr7 (89-199)||(48212725-48212837)
chr7 (134-198)||(16250221-16250285)
chr7 (46-107)||(13132410-13132470)
chr7 (119-183)||(34958319-34958383)
chr7 (46-107)||(15095726-15095786)
chr7 (134-198)||(58412-58476)
chr7 (134-198)||(13315081-13315145)
chr7 (89-160)||(16186857-16186928)
chr7 (144-198)||(3287743-3287797)
chr7 (61-107)||(15140130-15140176)
chr7 (45-107)||(33002062-33002124)
chr7 (107-157)||(42565872-42565922)
chr7 (68-210)||(47974807-47974948)
chr7 (140-197)||(19283051-19283108)
chr7 (46-107)||(48807415-48807475)
chr7 (134-198)||(13744509-13744573)
chr7 (129-193)||(15700887-15700951)
chr7 (68-107)||(8135326-8135365)
chr7 (107-198)||(15700734-15700824)
chr7 (134-197)||(25943256-25943319)
chr7 (107-155)||(9743120-9743169)
chr7 (119-183)||(831864-831928)
chr7 (119-183)||(1197044-1197108)
chr7 (134-198)||(8930764-8930828)
chr7 (74-198)||(12127162-12127285)
chr7 (71-107)||(13698728-13698764)
chr7 (134-198)||(18570636-18570700)
chr7 (106-198)||(21661218-21661309)
chr7 (107-149)||(15119354-15119397)
chr7 (68-106)||(14274256-14274294)
chr7 (145-207)||(20214147-20214209)
chr7 (108-198)||(33060402-33060491)
chr7 (74-107)||(12465349-12465382)
chr7 (74-107)||(13147561-13147594)
chr7 (107-155)||(14160897-14160946)
chr7 (145-198)||(14180397-14180450)
chr7 (107-155)||(14318034-14318083)
chr7 (145-198)||(20586352-20586405)
chr7 (74-107)||(20620216-20620249)
chr7 (145-197)||(8851159-8851211)
chr7 (145-197)||(11067468-11067520)
chr7 (145-197)||(12372274-12372326)
chr7 (145-197)||(12465260-12465312)
chr7 (145-197)||(32433589-32433641)
chr7 (144-208)||(35771430-35771494)
[»] chr8 (39 HSPs)
chr8 (91-199)||(36732410-36732518)
chr8 (89-197)||(18816295-18816403)
chr8 (89-197)||(21514635-21514743)
chr8 (107-198)||(22208230-22208322)
chr8 (89-199)||(4380615-4380725)
chr8 (107-197)||(22258306-22258397)
chr8 (107-198)||(12577841-12577932)
chr8 (46-109)||(20022120-20022182)
chr8 (91-198)||(21676592-21676697)
chr8 (92-198)||(21678845-21678949)
chr8 (110-198)||(21676499-21676585)
chr8 (134-193)||(22483775-22483834)
chr8 (46-107)||(45469309-45469369)
chr8 (119-183)||(18023570-18023634)
chr8 (46-107)||(31722583-31722643)
chr8 (134-198)||(21399706-21399770)
chr8 (134-198)||(21794199-21794263)
chr8 (134-198)||(22345153-22345217)
chr8 (134-198)||(22356813-22356877)
chr8 (134-198)||(22610266-22610330)
chr8 (119-183)||(38184926-38184990)
chr8 (121-183)||(22483914-22483976)
chr8 (107-197)||(21579206-21579296)
chr8 (135-198)||(36305988-36306050)
chr8 (45-208)||(39694266-39694428)
chr8 (61-107)||(22318000-22318046)
chr8 (34-155)||(22474646-22474767)
chr8 (107-155)||(12037205-12037254)
chr8 (145-210)||(17906836-17906901)
chr8 (45-106)||(22532222-22532283)
chr8 (45-106)||(22536907-22536968)
chr8 (107-155)||(29762909-29762958)
chr8 (134-197)||(18834412-18834474)
chr8 (74-197)||(20083638-20083760)
chr8 (107-149)||(22966772-22966815)
chr8 (74-107)||(5082301-5082334)
chr8 (107-155)||(17978457-17978506)
chr8 (74-107)||(19140695-19140728)
chr8 (107-155)||(41680174-41680223)
[»] scaffold0676 (1 HSPs)
scaffold0676 (91-198)||(2827-2934)
[»] scaffold1186 (1 HSPs)
scaffold1186 (89-198)||(1964-2073)
[»] scaffold0005 (1 HSPs)
scaffold0005 (89-198)||(186195-186304)
[»] chr5 (22 HSPs)
chr5 (91-198)||(16063697-16063804)
chr5 (89-198)||(18744818-18744927)
chr5 (89-197)||(23199207-23199315)
chr5 (91-198)||(6551289-6551396)
chr5 (107-199)||(660752-660842)
chr5 (89-193)||(1627071-1627176)
chr5 (107-210)||(26762364-26762467)
chr5 (134-198)||(32607315-32607379)
chr5 (107-199)||(1626916-1627008)
chr5 (179-234)||(21914455-21914510)
chr5 (68-106)||(30138064-30138102)
chr5 (107-155)||(14025848-14025897)
chr5 (74-107)||(17876133-17876166)
chr5 (107-199)||(26749993-26750085)
chr5 (68-197)||(36508633-36508761)
chr5 (107-149)||(24068191-24068234)
chr5 (68-107)||(31456884-31456923)
chr5 (144-198)||(21398643-21398697)
chr5 (107-155)||(8833247-8833296)
chr5 (121-198)||(20313253-20313328)
chr5 (145-198)||(21300043-21300096)
chr5 (107-152)||(21504102-21504147)
[»] scaffold0056 (1 HSPs)
scaffold0056 (89-199)||(18219-18329)
[»] scaffold0878 (1 HSPs)
scaffold0878 (107-198)||(3421-3512)
[»] chr2 (30 HSPs)
chr2 (107-198)||(21315475-21315566)
chr2 (107-198)||(21335265-21335356)
chr2 (89-199)||(23610570-23610680)
chr2 (89-198)||(21369237-21369346)
chr2 (34-198)||(149500-149668)
chr2 (61-107)||(3539753-3539799)
chr2 (107-157)||(25584302-25584352)
chr2 (62-107)||(25142121-25142166)
chr2 (134-198)||(23801485-23801549)
chr2 (110-157)||(19647199-19647246)
chr2 (107-198)||(20005970-20006060)
chr2 (121-198)||(34491239-34491316)
chr2 (134-198)||(28344987-28345051)
chr2 (68-107)||(357805-357844)
chr2 (68-107)||(1383632-1383671)
chr2 (89-155)||(28652593-28652660)
chr2 (41-107)||(19201289-19201355)
chr2 (46-107)||(27852569-27852630)
chr2 (74-107)||(24884400-24884433)
chr2 (47-107)||(22251537-22251597)
chr2 (74-198)||(24516116-24516239)
chr2 (118-198)||(45535899-45535978)
chr2 (74-107)||(5031218-5031251)
chr2 (74-107)||(9975859-9975892)
chr2 (74-107)||(17307416-17307449)
chr2 (145-198)||(17307486-17307539)
chr2 (74-107)||(24780929-24780962)
chr2 (145-198)||(40912320-40912373)
chr2 (145-197)||(5031129-5031181)
chr2 (145-197)||(24780840-24780892)
[»] scaffold0247 (1 HSPs)
scaffold0247 (105-197)||(1036-1128)
[»] scaffold0007 (3 HSPs)
scaffold0007 (34-198)||(16418-16584)
scaffold0007 (121-198)||(18700-18777)
scaffold0007 (109-152)||(18902-18945)
[»] scaffold0061 (2 HSPs)
scaffold0061 (109-198)||(14585-14674)
scaffold0061 (109-198)||(23643-23732)
[»] scaffold0231 (1 HSPs)
scaffold0231 (107-198)||(17520-17611)
[»] scaffold0203 (1 HSPs)
scaffold0203 (89-198)||(17939-18048)
[»] scaffold0505 (1 HSPs)
scaffold0505 (107-197)||(4898-4988)
[»] scaffold1256 (1 HSPs)
scaffold1256 (110-199)||(2198-2287)
[»] scaffold0516 (1 HSPs)
scaffold0516 (107-199)||(5303-5395)
[»] scaffold0853 (1 HSPs)
scaffold0853 (89-197)||(2454-2564)
[»] scaffold0213 (2 HSPs)
scaffold0213 (107-198)||(19169-19260)
scaffold0213 (107-144)||(19123-19160)
[»] scaffold0431 (1 HSPs)
scaffold0431 (107-197)||(5592-5685)
[»] scaffold0369 (1 HSPs)
scaffold0369 (89-198)||(15615-15723)
[»] scaffold0108 (1 HSPs)
scaffold0108 (117-198)||(6390-6471)
[»] scaffold1766 (1 HSPs)
scaffold1766 (145-232)||(661-748)
[»] scaffold0032 (2 HSPs)
scaffold0032 (107-198)||(61847-61937)
scaffold0032 (179-232)||(68331-68384)
[»] scaffold0020 (3 HSPs)
scaffold0020 (145-232)||(168964-169051)
scaffold0020 (107-210)||(174183-174286)
scaffold0020 (145-197)||(143611-143663)
[»] scaffold0174 (4 HSPs)
scaffold0174 (136-198)||(5445-5507)
scaffold0174 (121-197)||(11592-11668)
scaffold0174 (134-198)||(19845-19909)
scaffold0174 (74-107)||(11320-11353)
[»] scaffold0594 (1 HSPs)
scaffold0594 (121-198)||(2223-2300)
[»] scaffold0092 (1 HSPs)
scaffold0092 (107-198)||(38441-38531)
[»] scaffold0058 (1 HSPs)
scaffold0058 (91-198)||(59655-59761)
[»] scaffold0139 (2 HSPs)
scaffold0139 (107-198)||(40160-40253)
scaffold0139 (114-198)||(23503-23587)
[»] scaffold0004 (5 HSPs)
scaffold0004 (121-198)||(66071-66148)
scaffold0004 (129-210)||(111344-111425)
scaffold0004 (134-197)||(73076-73139)
scaffold0004 (134-198)||(75926-75990)
scaffold0004 (74-107)||(328379-328412)
[»] scaffold0298 (1 HSPs)
scaffold0298 (119-183)||(359-423)
[»] scaffold0076 (1 HSPs)
scaffold0076 (177-233)||(22463-22519)
[»] scaffold0337 (1 HSPs)
scaffold0337 (107-198)||(3167-3257)
[»] scaffold0017 (2 HSPs)
scaffold0017 (107-194)||(26689-26776)
scaffold0017 (107-198)||(23576-23666)
[»] scaffold0086 (1 HSPs)
scaffold0086 (121-198)||(35185-35262)
[»] scaffold0180 (1 HSPs)
scaffold0180 (119-183)||(10570-10633)
[»] scaffold0394 (1 HSPs)
scaffold0394 (107-198)||(7513-7603)
[»] scaffold0148 (1 HSPs)
scaffold0148 (34-198)||(8731-8897)
[»] scaffold0037 (3 HSPs)
scaffold0037 (45-108)||(117889-117951)
scaffold0037 (45-107)||(113057-113118)
scaffold0037 (78-107)||(81501-81530)
[»] scaffold0628 (1 HSPs)
scaffold0628 (46-107)||(1148-1208)
[»] scaffold0251 (1 HSPs)
scaffold0251 (47-107)||(20174-20234)
[»] scaffold0371 (1 HSPs)
scaffold0371 (107-210)||(10433-10536)
[»] scaffold0031 (2 HSPs)
scaffold0031 (134-198)||(127342-127406)
scaffold0031 (61-107)||(108208-108255)
[»] scaffold0379 (1 HSPs)
scaffold0379 (134-197)||(10937-10999)
[»] scaffold0175 (1 HSPs)
scaffold0175 (46-101)||(8544-8598)
[»] scaffold0125 (1 HSPs)
scaffold0125 (107-157)||(28513-28564)
[»] scaffold0021 (2 HSPs)
scaffold0021 (114-157)||(17075-17118)
scaffold0021 (114-157)||(26606-26649)
[»] scaffold0848 (1 HSPs)
scaffold0848 (57-107)||(2110-2160)
[»] scaffold0555 (1 HSPs)
scaffold0555 (132-198)||(8745-8811)
[»] scaffold0217 (1 HSPs)
scaffold0217 (95-157)||(28664-28726)
[»] scaffold0162 (1 HSPs)
scaffold0162 (89-147)||(23932-23990)
[»] scaffold0083 (2 HSPs)
scaffold0083 (45-107)||(10842-10904)
scaffold0083 (75-107)||(5124-5156)
[»] scaffold0385 (1 HSPs)
scaffold0385 (107-155)||(307-356)
[»] scaffold0338 (2 HSPs)
scaffold0338 (179-232)||(10727-10780)
scaffold0338 (68-106)||(161-199)
[»] scaffold1941 (1 HSPs)
scaffold1941 (74-198)||(68-191)
[»] scaffold0098 (1 HSPs)
scaffold0098 (134-198)||(40096-40160)
[»] scaffold0048 (1 HSPs)
scaffold0048 (134-198)||(68725-68789)
[»] scaffold0035 (1 HSPs)
scaffold0035 (134-198)||(43786-43848)
[»] scaffold0001 (6 HSPs)
scaffold0001 (145-197)||(31994-32046)
scaffold0001 (145-197)||(37301-37353)
scaffold0001 (74-107)||(31924-31957)
scaffold0001 (74-107)||(37231-37264)
scaffold0001 (145-198)||(77687-77740)
scaffold0001 (179-216)||(499092-499129)
[»] scaffold1800 (1 HSPs)
scaffold1800 (107-198)||(570-660)
[»] scaffold0230 (1 HSPs)
scaffold0230 (68-103)||(6778-6813)
[»] scaffold0165 (1 HSPs)
scaffold0165 (107-198)||(31892-31982)
[»] scaffold0156 (1 HSPs)
scaffold0156 (68-107)||(16528-16567)
[»] scaffold0149 (2 HSPs)
scaffold0149 (68-107)||(21535-21574)
scaffold0149 (74-107)||(29662-29695)
[»] scaffold0145 (1 HSPs)
scaffold0145 (107-149)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (107-149)||(29273-29316)
[»] scaffold0059 (1 HSPs)
scaffold0059 (107-198)||(49692-49782)
[»] scaffold0040 (1 HSPs)
scaffold0040 (68-107)||(106140-106179)
[»] scaffold0462 (2 HSPs)
scaffold0462 (107-141)||(1279-1313)
scaffold0462 (107-141)||(6785-6819)
[»] scaffold1939 (1 HSPs)
scaffold1939 (107-152)||(90-135)
[»] scaffold1633 (2 HSPs)
scaffold1633 (74-107)||(1135-1168)
scaffold1633 (145-197)||(1205-1257)
[»] scaffold1283 (2 HSPs)
scaffold1283 (74-107)||(557-590)
scaffold1283 (145-197)||(468-520)
[»] scaffold0859 (1 HSPs)
scaffold0859 (46-107)||(4585-4645)
[»] scaffold0737 (1 HSPs)
scaffold0737 (74-107)||(4803-4836)
[»] scaffold0632 (2 HSPs)
scaffold0632 (74-107)||(1095-1128)
scaffold0632 (145-198)||(1165-1218)
[»] scaffold0630 (1 HSPs)
scaffold0630 (107-155)||(9025-9074)
[»] scaffold0439 (1 HSPs)
scaffold0439 (107-199)||(4383-4475)
[»] scaffold0261 (1 HSPs)
scaffold0261 (107-147)||(6468-6509)
[»] scaffold0241 (2 HSPs)
scaffold0241 (74-107)||(2494-2527)
scaffold0241 (74-107)||(3112-3145)
[»] scaffold0205 (1 HSPs)
scaffold0205 (121-198)||(5615-5690)
[»] scaffold0113 (1 HSPs)
scaffold0113 (145-198)||(35490-35543)
[»] scaffold0111 (1 HSPs)
scaffold0111 (74-107)||(12622-12655)
[»] scaffold0080 (1 HSPs)
scaffold0080 (74-107)||(21882-21915)
[»] scaffold0065 (1 HSPs)
scaffold0065 (179-216)||(55975-56012)
[»] scaffold0063 (1 HSPs)
scaffold0063 (107-155)||(62680-62729)
[»] scaffold0028 (1 HSPs)
scaffold0028 (46-103)||(3145-3201)
[»] scaffold0008 (1 HSPs)
scaffold0008 (46-107)||(135593-135653)
[»] scaffold0121 (1 HSPs)
scaffold0121 (105-144)||(20159-20199)
[»] scaffold0047 (1 HSPs)
scaffold0047 (145-197)||(79049-79101)
[»] scaffold0036 (1 HSPs)
scaffold0036 (145-197)||(78185-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (145-197)||(24131-24183)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 27 - 232
Target Start/End: Complemental strand, 8276159 - 8275954
Alignment:
Q  27 tggacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 126  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8276159 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaaatatcaacaa 8276060  T
Q  127 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctcttt 226  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8276059 ctacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctcttt 8275960  T
Q  227 gcttct 232  Q
    | ||||    
T  8275959 ggttct 8275954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 38056842 - 38056671
Alignment:
Q  27 tggacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 126  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38056842 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaa 38056743  T
Q  127 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||    
T  38056742 ctacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 28476842 - 28476733
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  28476842 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccacc 28476743  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  28476742 cttaccttag 28476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  114 aaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 24719600 - 24719509
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||    
T  24719600 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc-cacccttaccatagg 24719509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 12710829 - 12710920
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||||| || | |||||||||    
T  12710829 aacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtcccatctttaccttag 12710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 22145752 - 22145666
Alignment:
Q  111 tcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||| |||||||||||||    
T  22145752 tcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 24007315 - 24007224
Alignment:
Q  107 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||    
T  24007315 aacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaa-tcattatcagagaaagctagtcccacccttaccttag 24007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 4595995 - 4595933
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaac 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4595995 aattcatcggattatctactcttaaatcaaccaattacaacttctaaatctaattcccaaaac 4595933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 17901857 - 17901793
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  17901857 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 17901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 6834152 - 6834229
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||    
T  6834152 caacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttag 6834229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 8306494 - 8306659
Alignment:
Q  34 caattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaag 133  Q
    |||||||||||  |||||||| ||||| ||||||||  | ||| |||||  || ||| || ||||||| | | ||||||||||||| ||| ||| ||||     
T  8306494 caattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaactaacaa-aacgacaac 8306592  T
Q  134 --gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
      ||||||||| |||| ||||||||||||| |||||||||| |||||||||| ||| ||||||||||    
T  8306593 atgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactcttaccttag 8306659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 39061283 - 39061373
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| |||| | || | ||||| ||| ||||||||||    
T  39061283 aacatcaaaactatcaacaactacaaggttaaaccttttttcagaattata-tactcatgattacagaaggttagtcccactcttaccttag 39061373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 34392757 - 34392821
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  34392757 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 635064 - 635003
Alignment:
Q  137 aaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||| |||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttag 635003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 35895088 - 35895152
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||||  |||| ||||||||    
T  35895088 gttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttag 35895152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 51324405 - 51324466
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaa 106  Q
    ||||||||  ||||| |||||| ||||| |||||||||||||||| ||||||||||||||||    
T  51324405 ccaattcaatagattttctactattaaaacaaccaattacaacttttaaacctaattcccaa 51324466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 45499531 - 45499595
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  45499531 gttaaacccctttatagaatcatacaacccattattagagaaagctagtctcacccttaccttag 45499595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 21188123 - 21188033
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||||  ||||| ||||| ||| |||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  21188123 aacatcaaaactatcaacaactacaaaattaaatcctttctcaaaattata-tactcatgattaaaaaaggttagtcccacccttaccttag 21188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 44822149 - 44822110
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  44822149 ttaaaacaaccaattacaacttctaaacctaattcccaaa 44822110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 7320729 - 7320683
Alignment:
Q  61 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||    
T  7320729 tctactattaaatcaaccaattacaacatctaaacataattcccaaa 7320683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 7052050 - 7052011
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  7052050 ttaaaacaaccaattacaatttctaaacctaattcccaaa 7052011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 7703136 - 7703175
Alignment:
Q  159 aactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  7703136 aactcattattagagaaagctagtcccacccttaccttag 7703175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 19676641 - 19676763
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 173  Q
    ||||||||||||||||| ||||||||||||||||   ||| |||||  | | || || | | ||||| |  |||||||||||||||||| |  ||||||     
T  19676641 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac-atgctaaactcaatttcagaattatacaacttagaattagag 19676739  T
Q  174 aaagctagtcacacccttacctta 197  Q
    |||| ||||| |||||||||||||    
T  19676740 aaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 20708148 - 20708058
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || ||||||||||  ||| ||||| |||||||||||||||||| |||||| | ||| | || | ||||| ||||||||||||||    
T  20708148 aacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactca-tgttaaagaaggttagtcccacccttaccttag 20708058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 40390112 - 40390155
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  40390112 aacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 14792642 - 14792604
Alignment:
Q  117 ctatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  14792642 ctattaacaactacaaggttaaaccctttttcaggatta 14792604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 20588636 - 20588690
Alignment:
Q  143 tttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||| ||||| ||||||| |||||||||| ||||||| || |||||||||||||    
T  20588636 ttttttagaatcatacaacccattattagagaaagctaatcccacccttacctta 20588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 20593174 - 20593228
Alignment:
Q  143 tttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||| ||||| ||||||| |||||||||| ||||||| || |||||||||||||    
T  20593174 ttttttagaatcatacaacccattattagagaaagctaatcccacccttacctta 20593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 21243837 - 21243799
Alignment:
Q  117 ctatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  21243837 ctattaacaactacaaggttaaaccctttttcaggatta 21243799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 18121565 - 18121614
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  18121565 aacatcaaaacctattaacaactacaaggttaaatcctttttcaggatta 18121614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 20633756 - 20633723
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  20633756 caaccaattacaacttcaaaacctaattcccaaa 20633723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 38887177 - 38887128
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| ||||    
T  38887177 aacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 38887128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 42913049 - 42913102
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  42913049 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 42913102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 12327806 - 12327742
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||| || |||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||    
T  12327806 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttag 12327742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 21046101 - 21046049
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 42912952 - 42913008
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcc 103  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||    
T  42912952 aattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcc 42913008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 51336468 - 51336532
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||| || |||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||    
T  51336468 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 51336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 9638892 - 9639063
Alignment:
Q  27 tggacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 126  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9638892 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaattatcaacaa 9638991  T
Q  127 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  9638992 ctacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttag 9639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 14631079 - 14631188
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  14631079 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 14631178  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  14631179 cttaccttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 16296900 - 16296991
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16296900 aacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 25513795 - 25513904
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  25513795 tctaaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacc 25513894  T
Q  189 cttaccttag 198  Q
     |||||||||    
T  25513895 attaccttag 25513904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 35660902 - 35661002
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||||  | ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  35660902 taaacctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccct 35661001  T
Q  191 t 191  Q
    |    
T  35661002 t 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 26446151 - 26446261
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||  |||    
T  26446151 tctaaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctacc 26446250  T
Q  189 cttaccttagg 199  Q
    ||||| |||||    
T  26446251 cttactttagg 26446261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 33186864 - 33186955
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||    
T  33186864 aacatcaaaacctattaacaaccacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctacctta 33186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 12424383 - 12424290
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaacccttttt--cagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||  |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  12424383 aacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 2424477 - 2424385
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    |||||||||||||  |||||||||||| ||||||||||||||| |||||||||||| |  |||||| |||| ||||| |||||||||||||||    
T  2424477 aacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttagg 2424385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 15239882 - 15239815
Alignment:
Q  131 aaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||    
T  15239882 aaggttaaaccctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 13847193 - 13847264
Alignment:
Q  137 aaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 208  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  13847193 aaaccattttttagaattatacaacccattattagagaaagctagtctcacccttaccttaggttaatcgat 13847264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 15747851 - 15747787
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||| |||||    
T  15747851 atcaacaactacaatgttaaaccctttttcagaattatacaactcatctttagagaaagttagtc 15747787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 17142996 - 17143057
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagcta 180  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||  ||||| |||||||    
T  17142996 atcaacaactacaatgttaaaccccttttcagaattatacaactcatctttagagaaagcta 17143057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 14477594 - 14477684
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||  |||||| |||| | || | ||||  ||||||||||||||    
T  14477594 aacatcaaaactatcaacgactacaagatcaaaccctttttcagaattata-tactcatgattaaagaaggttagtgccacccttaccttag 14477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 18462986 - 18463076
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||| |||| | || | ||||| |||| |||||||||    
T  18462986 aacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcccacctttaccttag 18463076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 9622478 - 9622542
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| | ||||| |||||||||| |||||||||| ||||||||||||||    
T  9622478 gttaaacccctttttagaatcagacaacccattattagagaaagctagtcccacccttaccttag 9622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 10273372 - 10273436
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||| |||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  10273372 gttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 10273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 55583185 - 55583249
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| | ||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  55583185 gttaaacccctttttataatcatacaacccattattagagaaagctagtcccacccttaccttag 55583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 12623278 - 12623327
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  12623278 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 12623327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 19566008 - 19565959
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  19566008 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 19565959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 37019670 - 37019723
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||||||||||||||||||    
T  37019670 tttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 45314173 - 45314124
Alignment:
Q  107 aacatcaaaactatcaacaactacaag-gttaaaccctttttcagaatta 155  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  45314173 aacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 26921598 - 26921550
Alignment:
Q  108 acatcaaaactatcaacaactacaag-gttaaaccctttttcagaatta 155  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  26921598 acatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 26921550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 15115222 - 15115275
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  15115222 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 16998455 - 16998488
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  16998455 caaccaattacaacttcaaaacctaattcccaaa 16998488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 19739772 - 19739809
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcc 216  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  19739772 tagtctcacccttaccttaggataatcgattggcagcc 19739809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 25091583 - 25091616
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  25091583 caaccaattacaacttcaaaacctaattcccaaa 25091616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 27996825 - 27996862
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcc 216  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  27996825 tagtcccacccttaccttaggataatcgattggcagcc 27996862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 46741177 - 46741210
Alignment:
Q  122 aacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||||||||||||||||||||| ||||    
T  46741177 aacaactacaaggttaaaccctttttcaggatta 46741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 53630596 - 53630563
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  53630596 caaccaattacaacttcaaaacctaattcccaaa 53630563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 11425943 - 11425995
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11425943 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 14549695 - 14549723
Alignment:
Q  79 aattacaacttctaaacctaattcccaaa 107  Q
    |||||||||||||||||||||||||||||    
T  14549695 aattacaacttctaaacctaattcccaaa 14549723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 19610324 - 19610376
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  19610324 tttcagaattatacaacttaaaattagagaaagttagtctcacccttacctta 19610376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 25091653 - 25091705
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 42875797 - 42875849
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||| |||||| ||||| |||||||||||||    
T  42875797 tttcagaattatacaacttagaattatataaagttagtcccacccttacctta 42875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 53630526 - 53630474
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 144; Significance: 8e-76; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 29 - 216
Target Start/End: Original strand, 13833 - 14019
Alignment:
Q  29 gacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaact 128  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13833 gacaccaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaact 13932  T
Q  129 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcc 216  Q
     ||||||||||||||||||||||||| |||||| |||||||||| |||||||||| ||||||||||||| ||| | ||||||||||||    
T  13933 tcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttacctta-gattaacgatcggcagcc 14019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 19953 - 20019
Alignment:
Q  144 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 210  Q
    ||||||||||||||  ||| |  |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  19953 ttttcagaattataacacttagaattagagaaagttagtcccacccttaccttaggttaatcgatcg 20019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 18811 - 18639
Alignment:
Q  27 tggacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 126  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18811 tggacaccaattattaccctaattcatcagattatctagtcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaa 18712  T
Q  127 ctacaaggttaaaccctttttcagaatta-tacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  18711 ctacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtcccacccttaccttag 18639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 14641718 - 14641547
Alignment:
Q  27 tggacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 126  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  14641718 tggacaccaattattaccctaattcatcagattatctactcttaaatcaacaaattacaacttctaaacctaattcccaaaacatcaatactaacaacaa 14641619  T
Q  127 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| || ||||||||||||||    
T  14641618 ctacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttag 14641547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 17208468 - 17208577
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  17208468 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccacc 17208567  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  17208568 cttaccttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 14152562 - 14152386
Alignment:
Q  34 caattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 132  Q
    ||||||| | || |||||||| |||||||||||||| |  ||| |||||  |  ||| || ||||||||  | ||||||||||| ||  |||||||||||    
T  14152562 caattatcaacctaattcatcggattatctactctttatacaatcaattttagtttcaaaccctaattct-acaacatcaaaacctactaacaactacaa 14152464  T
Q  133 ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 210  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||| |||||    
T  14152463 ggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttaccttaggttaatggatcg 14152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 14520408 - 14520499
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||| | |||||||||| ||||||||||||||    
T  14520408 aacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccacccttaccttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 29907603 - 29907692
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29907603 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 29948769 - 29948858
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29948769 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29948858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 29997923 - 29998012
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29997923 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 5215608 - 5215699
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||    
T  5215608 aacatcaaaacctattaataactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccacccttacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 15566706 - 15566797
Alignment:
Q  108 acatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||||| ||||    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttag 15566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 22841342 - 22841278
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||    
T  22841342 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 45803407 - 45803338
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  45803407 caacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 2247944 - 2247880
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  2247944 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 2247880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 3160732 - 3160626
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||| | | || ||||||||||||||||||||||| ||||||||| |||| |||||||||  |||||| |||| | || | ||||| ||||||    
T  3160732 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagtctcaccct 3160634  T
Q  191 taccttag 198  Q
    ||||||||    
T  3160633 taccttag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 21845756 - 21845651
Alignment:
Q  92 aaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccctt 191  Q
    |||||||||| | | |||||||||||||| |||||||||||| |||||||||||||||||| ||||  ||| || |||| | || | ||||| |||||||    
T  21845756 aaacctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tacttatgattaaagaaggttagtcccaccctt 21845658  T
Q  192 accttag 198  Q
    |||||||    
T  21845657 accttag 21845651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 2841569 - 2841505
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||  |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  2841569 gttaaacctctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 2841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 11563628 - 11563687
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11563628 aattcaacagatt-tctactcttaattcaaccaattacaacttttaaacctaattcccaaa 11563687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 54875537 - 54875474
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| |||||||||||||    
T  54875537 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 16050871 - 16050992
Alignment:
Q  88 ttctaaacctaattcccaaaacatcaaaactatcaacaactacaag--gttaaaccctttttcagaattatacaactcattattagataaagctagtcac 185  Q
    ||||||||||||||| |||| | ||||||||| |||||  |||||   |||||||||  ||||||||| |||||||| |  |||||| |||| ||||| |    
T  16050871 ttctaaacctaattctcaaatcctcaaaacta-caaca--tacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtccc 16050967  T
Q  186 acccttaccttaggataatcgatcg 210  Q
    |||||||||||||| ||||||||||    
T  16050968 acccttaccttaggttaatcgatcg 16050992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 48631294 - 48631344
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  48631294 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 48631344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 49968998 - 49968948
Alignment:
Q  57 attatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  49968998 attagctactattaaatcaaccaattacaacttataaacctaattcccaaa 49968948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 9511058 - 9511005
Alignment:
Q  54 cagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  9511058 cagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaa 9511005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 9519033 - 9518980
Alignment:
Q  54 cagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  9519033 cagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaa 9518980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 12917382 - 12917305
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | |||||||||||||| ||||| ||||||| |||||||||| |||| ||||| |||||||| |||||    
T  12917382 caacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 3527220 - 3527156
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| | ||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  3527220 gttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccacccttaccttag 3527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 6156700 - 6156763
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  6156700 gttaaacccctttt-agaatcatacaacccattattagagaaagctagtcccacccttaccttag 6156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 6159394 - 6159458
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| ||||| |||| ||||||||||||||    
T  6159394 gttaaacccctttttagaatcatacaacccattattagagaaagcgagtctcacccttaccttag 6159458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 17684926 - 17684824
Alignment:
Q  107 aacatcaaaactatcaacaactacaag--gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataat 204  Q
    ||||||||||||| ||| ||| |||||  ||||||||| |||| ||||| ||||||| |||||||| | ||| |||||| ||||||||||||| || |||    
T  17684926 aacatcaaaactaacaa-aacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtcccacccttaccttaagaaaat 17684828  T
Q  205 cgat 208  Q
    ||||    
T  17684827 cgat 17684824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 24549016 - 24548952
Alignment:
Q  135 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    |||||||| |||| ||||| ||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  24549016 ttaaacccctttttagaatcatacaacccattattagataaagttagtctcacccttactttagg 24548952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 13520404 - 13520449
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggtt 136  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||    
T  13520404 taaacctaattcctataacatcaaaactaacaacaactacaaggtt 13520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 53646149 - 53646100
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  53646149 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 53646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 54330397 - 54330348
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  54330397 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 54330348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 14442164 - 14442228
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||  |||| ||||| ||||||| |||||||| | |||||||||| ||||||||||||||    
T  14442164 gttaaaccgctttttagaatcatacaacccattattacagaaagctagtcccacccttaccttag 14442228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 17539106 - 17539158
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  ||||||||||| ||||| |||||||||||||    
T  17539106 tttcagaattatacaacttagaattagataaagttagtctcacccttacctta 17539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 50348175 - 50348115
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||||||    
T  50348175 aattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 50348115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 6003148 - 6003238
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || ||||||||||  ||| ||||  |||||||||||||||||| |||||| ||||| | || | ||||| ||||||||||||||    
T  6003148 aacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactca-tattaaagaaggttagtcccacccttaccttag 6003238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 50350908 - 50350815
Alignment:
Q  107 aacatcaaaactatcaacaactac-aaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| ||| |||||| ||||||||||||  |||||||||||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  50350908 aacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattata-tactcatgattaaagaaggttagtcccacccttaccttag 50350815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 33565086 - 33565140
Alignment:
Q  144 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||| ||| |  |||||| |||| ||||||||||||||||||||    
T  33565086 ttttcagaattataccacttagaattagagaaagttagtcacacccttaccttag 33565140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 10563638 - 10563671
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  10563638 caaccaattacaacttcaaaacctaattcccaaa 10563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 14508749 - 14508806
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaattacaactt-ctaaacctaattcc 103  Q
    |||||||||||||||||||||||    |||||||||||||||| | ||||||||||||    
T  14508749 aattcatcagattatctactctttctacaaccaattacaacttccaaaacctaattcc 14508806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 17044896 - 17044929
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  17044896 caaccaattacaacttcaaaacctaattcccaaa 17044929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 17518995 - 17518962
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  17518995 caaccaattacaacttcaaaacctaattcccaaa 17518962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 17533857 - 17533824
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  17533857 caaccaattacaacttcaaaacctaattcccaaa 17533824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 24177788 - 24177735
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| || |||||| |||| | ||| ||||||||||||||    
T  24177788 tttcagaattatacaacttataattagagaaagtttgtcccacccttaccttag 24177735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 24547189 - 24547254
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    ||||||| | |||| ||||| ||||||| |||||||||| |||| ||||| || ||||||||||||    
T  24547189 gttaaactcctttttagaatcatacaacccattattagagaaagatagtctcatccttaccttagg 24547254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 40807926 - 40807959
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  40807926 caaccaattacaacttcaaaacctaattcccaaa 40807959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 40807996 - 40808049
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  40807996 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40808049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 44274418 - 44274471
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  44274418 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 44274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 49900660 - 49900693
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  49900660 caaccaattacaacttcaaaacctaattcccaaa 49900693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 325110 - 325158
Alignment:
Q  177 gctagtcacacccttaccttaggataatcgatcggcagcccttcctctt 225  Q
    ||||||| ||||||||||||| ||| | |||||||||||| ||||||||    
T  325110 gctagtcccacccttaccttaagattaacgatcggcagcctttcctctt 325158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 11259431 - 11259483
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11259431 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11259483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 17044966 - 17045018
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 17047126 - 17047178
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 17541434 - 17541486
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 22306635 - 22306583
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 42324097 - 42324061
Alignment:
Q  71 aatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42324097 aatcaaccaattacaacttctaaccctaatttccaaa 42324061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 19825656 - 19825485
Alignment:
Q  27 tggacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaa 126  Q
    |||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||    
T  19825656 tggacaccaattattaccctaattcatcatatcatctactcttaaatcaaccaattacaacttctaaacataattctcaaaacatcaaaactaacaacaa 19825557  T
Q  127 ctacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  19825556 ctacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttag 19825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 15998833 - 15998976
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  15998833 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcacc 15998932  T
Q  189 cttaccttaggataatcgatcggcagcccttcctctttgcttct 232  Q
    ||||||||||||||||||| ||  ||||||||||||||| ||||    
T  15998933 cttaccttaggataatcgaccgatagcccttcctctttggttct 15998976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 21683164 - 21683073
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  21683164 aacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttagg 21683073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 18982536 - 18982625
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||| |||||||||    
T  18982536 catcaaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgttaccttag 18982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 17318272 - 17318200
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaacta 119  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  17318272 aattcatcagattatctattcttaaatcaactaatcacaacttctaaacctaattcccaaaacatcaaaacta 17318200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 23658050 - 23658142
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||| ||||||||||||||    
T  23658050 aacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 20410600 - 20410512
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |  |||||||||||||    
T  20410600 catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccacccttacctta 20410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 29045260 - 29045324
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttag 29045324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 1818915 - 1819005
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||  |||||| |||| | || | ||||| ||||||||||||||    
T  1818915 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 34140560 - 34140455
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||| |||||||   ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  34140560 taaacttaattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattaga-gaagctagtcccaccct 34140463  T
Q  191 taccttag 198  Q
    ||||||||    
T  34140462 taccttag 34140455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 24506205 - 24506155
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  24506205 aacatcaaaactatcaacaactacaaaattaaaccctttttcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 28948475 - 28948537
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||||| || ||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  28948475 ccaattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaa 28948537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 10446206 - 10446270
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  10446206 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 10446270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 15890834 - 15890711
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 173  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||||  | | || ||| | |||||| |  |||||||||||||||||| |  ||||||     
T  15890834 caaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaacatg-ttaaactcaatttcagaattatacaacttagaattagag 15890736  T
Q  174 aaagctagtcacacccttaccttag 198  Q
    |||| ||||| ||||||||||||||    
T  15890735 aaagttagtcccacccttaccttag 15890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 31734669 - 31734772
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 205  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||| |  ||| || |||| | || | ||||| ||||||||||||||| |||||    
T  31734669 aacatcaaaacctattaacaactgcaaggttaaaccctttttcagaattaca-tacttatgattaaagaaggttagtcccacccttaccttaggttaatc 31734767  T
Q  206 gatcg 210  Q
    |||||    
T  31734768 gatcg 31734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 34153176 - 34153071
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||| ||||| |   ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  34153176 taaacttaattcctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattata-aacccattattaga-gaagctagtcccaccct 34153079  T
Q  191 taccttag 198  Q
    ||||||||    
T  34153078 taccttag 34153071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 23501588 - 23501634
Alignment:
Q  61 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||    
T  23501588 tctacttttaaatcaacaaattacaacttctaaacctaattcccaaa 23501634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 7217333 - 7217285
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  7217333 aacatcaaacctattaacaactacaaggttaaaccctttttcaggatta 7217285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 18982379 - 18982422
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaa 152  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  18982379 catcaaaactatcaacaactacaaaattaaaccctttttcagaa 18982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 16966800 - 16966853
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttct 232  Q
    ||||| |||||||| |||||||||||||||||||||||  ||||||||| ||||    
T  16966800 tagtctcacccttaacttaggataatcgatcggcagcctctcctctttgattct 16966853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 18259192 - 18259139
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttct 232  Q
    ||||| |||||||||||||||||||||||| |||||||  ||||||||| ||||    
T  18259192 tagtcccacccttaccttaggataatcgattggcagcctctcctctttggttct 18259139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 22557210 - 22557259
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  22557210 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 22557259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 25921963 - 25922054
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||| ||| |||||||||||||||||||||||||| || |||| |  ||| || |||| |||| | ||||| ||||||||||||||    
T  25921963 aacatcaaaacctattaacaactacaaggttaaacccttttttaggattaca-tacttatgattaaataaggttagtcccacccttaccttag 25922054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 18585729 - 18585764
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcc 103  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18585729 ttaaaacaaccaattacaacttctaaacctaattcc 18585764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 13285723 - 13285801
Alignment:
Q  120 tcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||| |||| | ||||||| |||||||||||||  ||||||| |||| | || | ||||| ||||||||||||||    
T  13285723 tcaacaacaacaatggtaaaccccttttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttag 13285801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 19401007 - 19401057
Alignment:
Q  57 attatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||| ||||| ||||||||| |||||||||||| |||||||||||| ||||    
T  19401007 attagctactattaaatcaaacaattacaacttataaacctaattctcaaa 19401057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 7827902 - 7827935
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  7827902 caaccaattacaacttcaaaacctaattcccaaa 7827935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 20183754 - 20183791
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcc 216  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  20183754 tagtcccacccttaccttaggttaatcgatcggcagcc 20183791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22152237 - 22152200
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcc 216  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  22152237 tagtcccacccttaccttaggttaatcgatcggcagcc 22152200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 23150409 - 23150376
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  23150409 caaccaattacaacttcaaaacctaattcccaaa 23150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 23431537 - 23431488
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||| ||||    
T  23431537 aacatcaaaacctattagcaactacaaggttaaaccctttttcaggatta 23431488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 27330103 - 27330070
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  27330103 caaccaattacaacttcaaaacctaattcccaaa 27330070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 27390843 - 27390810
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  27390843 caaccaattacaacttcaaaacctaattcccaaa 27390810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 7827972 - 7828024
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 12041673 - 12041609
Alignment:
Q  144 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 208  Q
    ||||||||||||||||||| |  |||| | || | ||||| ||||||||||||||| ||||||||    
T  12041673 ttttcagaattatacaacttagaattaaagaaggttagtcccacccttaccttaggttaatcgat 12041609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 19655283 - 19655231
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  19655283 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 19655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 23150339 - 23150287
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 708558 - 708428
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 167  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  708558 ttaaaacaaccaattacaacttctaaacctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccatta 708459  T
Q  168 ttagataaagctagtcacacccttaccttag 198  Q
    ||||| |||||||||| ||||| ||||||||    
T  708458 ttagagaaagctagtcccacccctaccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 19195558 - 19195664
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  19195558 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttt-cagaattatacaactcattattagagaaagctagtcccaccct 19195656  T
Q  191 taccttag 198  Q
    ||||||||    
T  19195657 taccttag 19195664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 43745618 - 43745710
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  43745618 aacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttaccttagg 43745710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 15575757 - 15575648
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  15575757 tctaaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacc 15575658  T
Q  189 cttaccttag 198  Q
    | ||||||||    
T  15575657 cctaccttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 8513842 - 8513740
Alignment:
Q  109 catcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 207  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||||||    
T  8513842 catcaaaacctataaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcga 8513743  T
Q  208 tcg 210  Q
    |||    
T  8513742 tcg 8513740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 20252290 - 20252181
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  20252290 tctaatcctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacc 20252191  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  20252190 cttaccttag 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 17070459 - 17070384
Alignment:
Q  27 tggacatcaattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattc 102  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17070459 tggacaccaattattaccctaattcatcagattatctacacttaaatcaaccaattacaacttctaaacctaattc 17070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 47095414 - 47095505
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  47095414 aacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccacccttaccttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 8488183 - 8488081
Alignment:
Q  109 catcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 207  Q
    ||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||||||    
T  8488183 catcaaaacctataaacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcga 8488084  T
Q  208 tcg 210  Q
    |||    
T  8488083 tcg 8488081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 4690771 - 4690661
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  4690771 tctaaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacc 4690672  T
Q  189 cttaccttagg 199  Q
     ||||||||||    
T  4690671 tttaccttagg 4690661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 18874772 - 18874664
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcaca 186  Q
    ||||| ||||||| | | ||||||||||||| ||||   |||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||| ||    
T  18874772 tctaaccctaatttctataacatcaaaactaccaac---tacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtctca 18874676  T
Q  187 cccttaccttag 198  Q
    ||||||||||||    
T  18874675 cccttaccttag 18874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 38299738 - 38299801
Alignment:
Q  135 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 38299801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 43276834 - 43276744
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||| |||||||||| |||| ||||| |||||||||||||    
T  43276834 aacatcaaaacctattaacaactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtcccacccttacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 48212837 - 48212725
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcaca 186  Q
    ||||| ||||||| | | ||||||||||||| |||||| ||||| |||||||||  ||||| ||||| |||||||  |||||| || |||||||||||||    
T  48212837 tctaaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcaca 48212738  T
Q  187 cccttaccttagg 199  Q
    |||||||||||||    
T  48212737 cccttaccttagg 48212725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 13132470 - 13132410
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  13132470 caattcaacagatt-tctactcttaaatcaaccgattacaacttctaaacctaattcccaaa 13132410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 34958319 - 34958383
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||  ||||| ||||||||||    
T  34958319 atcaacaactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagctagtc 34958383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 15095786 - 15095726
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||    
T  15095786 caattcaacagatt-tctactattaaatcaactaattacaacttctaaacctaattcccaaa 15095726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 58476 - 58412
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  58476 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 58412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 13315145 - 13315081
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||| ||||| ||||||||||||||    
T  13315145 gttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttag 13315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 16186857 - 16186928
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaa 160  Q
    ||||| ||||||| | | |||||||||||||  |||||| | ||||||||||||||||||||||||||||||    
T  16186857 tctaaccctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattatacaa 16186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 3287743 - 3287797
Alignment:
Q  144 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 15140130 - 15140176
Alignment:
Q  61 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  15140130 tctactattaaatcaaccaattacaacttttaaacctaattcccaaa 15140176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 33002062 - 33002124
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||||| |||||| |||||| ||| | |||||||||||||||||||| |||||||||||||    
T  33002062 ccaattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaa 33002124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 42565922 - 42565872
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||    
T  42565922 aacaacaaaattatcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 47974948 - 47974807
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 167  Q
    ||||| |||||||||||||||||||||| |||||||||||    ||||||||  | | || ||  | ||||| ||  ||||||||| |||||||| |  |    
T  47974948 ttaaaacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctg-ttaaatccagtttcagaatcatacaacttagaa 47974850  T
Q  168 ttagataaagctagtcacacccttaccttaggataatcgatcg 210  Q
    ||||| |||| ||||| ||||||||||||||| ||||||||||    
T  47974849 ttagagaaagttagtctcacccttaccttaggttaatcgatcg 47974807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 19283051 - 19283108
Alignment:
Q  140 ccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||||||| |||| ||||| |||| ||||| |||||||||||||    
T  19283051 ccctttttcagaattatacaacccattcttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 48807475 - 48807415
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||  ||| ||||||||||    
T  48807475 caattcaacagatt-tctactcttaaatcaaccaattacaacttctgtaccaaattcccaaa 48807415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 13744573 - 13744509
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||| ||| |||||||||| |||||||||| ||||||||||||||    
T  13744573 gttaaacccctttttagaatcataaaacccattattagagaaagctagtcccacccttaccttag 13744509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 15700951 - 15700887
Alignment:
Q  129 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttac 193  Q
    |||| ||||||||| |||| ||||| |||||||||||||||||| |||||||||| | |||||||    
T  15700951 acaatgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 8135365 - 8135326
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  8135365 ttaaatcaaccaattacaacttctaaacctaattctcaaa 8135326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 15700824 - 15700734
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||| ||||||| ||||||||||| | |||||||| |||| ||||  ||||||| |||||||||| |||||||||  || |||||||||||    
T  15700824 aacattaaaactaacaacaactacatg-ttaaacccctttttagaaccatacaacccattattagagaaagctagtatcatccttaccttag 15700734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 25943256 - 25943319
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||| |||||| ||  ||||||| |||||||||| |||||||||| |||||||||||||    
T  25943256 gttaaaccccttttcaaaaacatacaacccattattagagaaagctagtcccacccttacctta 25943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 9743169 - 9743120
Alignment:
Q  107 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaatta 155  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  9743169 aacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 9743120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 831928 - 831864
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| |||||||||||||| |||||| |||||| |||  ||||| ||| ||||||    
T  831928 atcaacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtc 831864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 1197108 - 1197044
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| |||||||||||||| |||||| |||||| |||  ||||| ||| ||||||    
T  1197108 atcaacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtc 1197044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 8930828 - 8930764
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||  ||||| ||||||||||||||    
T  8930828 gttaaacccctttttagaatcatacaacccattattagagaaatgtagtcccacccttaccttag 8930764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 198
Target Start/End: Complemental strand, 12127285 - 12127162
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 173  Q
    ||||||||||||||||| ||||||||||||||||    || |||||  | | || ||| | |||||| |  |||||||||||||||||| |  ||||||     
T  12127285 caaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaacatg-ttaaactcaatttcagaattatacaacttagaattagag 12127187  T
Q  174 aaagctagtcacacccttaccttag 198  Q
    |||| ||||| ||||||||||||||    
T  12127186 aaagttagtcccacccttaccttag 12127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 13698764 - 13698728
Alignment:
Q  71 aatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||||||||| |||||||||||||    
T  13698764 aatcaaccaattacaacttctaaccctaattcccaaa 13698728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 18570636 - 18570700
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||  |||||  |||||| |||||||||| |||||||||| ||||||||||||||    
T  18570636 gttaaacccctttctagaatcttacaacccattattagagaaagctagtctcacccttaccttag 18570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 21661218 - 21661309
Alignment:
Q  106 aaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||| || ||||||||||  ||| ||||  |||||||||||||||||| |||||| ||||| | || | ||||| ||||||||||||||    
T  21661218 aaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatataactca-tattaaagaaggttagtcccacccttaccttag 21661309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 15119397 - 15119354
Alignment:
Q  107 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttca 149  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  15119397 aacatcaaaatctattaacaactacaaggttaaaccctttttca 15119354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 14274256 - 14274294
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaa 106  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  14274256 ttaaaacaacaaattacaacttctaaacctaattcccaa 14274294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 20214147 - 20214209
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 207  Q
    ||||||||||||||||||||  ||| || |||| ||||| ||||||||||||||  |||||||    
T  20214147 tttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagattaatcga 20214209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 33060402 - 33060491
Alignment:
Q  108 acatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| ||| |||||| ||||  |||||||||||| ||||||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  33060402 acatcaaaattataaacaacaacaaaattaaacccttttccagaattata-gactcatgattaaagaaggttagtcccacccttaccttag 33060491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 12465382 - 12465349
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  12465382 caaccaattacaacttcaaaacctaattcccaaa 12465349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 13147594 - 13147561
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  13147594 caaccaattacaacttcaaaacctaattcccaaa 13147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 14160946 - 14160897
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||| ||||    
T  14160946 aacatcaaaacctattaacaactacaaggttaaaccccttttcaggatta 14160897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 14180450 - 14180397
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||  ||||||||||||||||||||    
T  14180450 tttcagaattatacaacttagaattagagaaaattagtcacacccttaccttag 14180397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 14318034 - 14318083
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  14318034 aacatcaaaacctattaacaactgcaaggttaaaccctttttcaggatta 14318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 20586352 - 20586405
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  20586352 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 20586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 20620216 - 20620249
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  20620216 caaccaattacaacttcaaaacctaattcccaaa 20620249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 8851211 - 8851159
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 11067468 - 11067520
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11067468 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11067520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 12372274 - 12372326
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 12465312 - 12465260
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 32433641 - 32433589
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  32433641 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 32433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 35771494 - 35771430
Alignment:
Q  144 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 208  Q
    ||||||||||||||  ||| |  |||||| |||| ||||| ||||||||||||||| ||||||||    
T  35771494 ttttcagaattatatcacttagaattagagaaagttagtcccacccttaccttaggttaatcgat 35771430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 36732518 - 36732410
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  36732518 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacaccct 36732419  T
Q  191 taccttagg 199  Q
    |||||||||    
T  36732418 taccttagg 36732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 18816403 - 18816295
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||    
T  18816403 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccacc 18816304  T
Q  189 cttacctta 197  Q
    |||||||||    
T  18816303 cttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 21514635 - 21514743
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||    
T  21514635 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccacc 21514734  T
Q  189 cttacctta 197  Q
    |||||||||    
T  21514735 cttacctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 22208230 - 22208322
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  22208230 aacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 22208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 4380725 - 4380615
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  4380725 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacc 4380626  T
Q  189 cttaccttagg 199  Q
    |||||||||||    
T  4380625 cttaccttagg 4380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 22258397 - 22258306
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  22258397 aacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 12577841 - 12577932
Alignment:
Q  107 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||| ||||||||| |||| ||||| ||||||||||||||    
T  12577841 aacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaact-attattagagaaagttagtcccacccttaccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 20022182 - 20022120
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaac 109  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  20022182 caattcatcagatt-tccactcttaaatcaaccaattacaacttctaaacctaattcccaaaac 20022120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 21676697 - 21676592
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||| | | || ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  21676697 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccaccct 21676600  T
Q  191 taccttag 198  Q
    ||||||||    
T  21676599 taccttag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 21678949 - 21678845
Alignment:
Q  92 aaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccctt 191  Q
    |||||||||| | | || ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| |||||||    
T  21678949 aaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccaccctt 21678852  T
Q  192 accttag 198  Q
    |||||||    
T  21678851 accttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 21676585 - 21676499
Alignment:
Q  110 atcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| ||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttac 193  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 45469369 - 45469309
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  45469369 caattcatcaaatt-tctactcttaaatcaaccaattacaacttctaaacataattcccaaa 45469309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 18023634 - 18023570
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  18023634 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 18023570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 31722643 - 31722583
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  31722643 caattcaacagatt-tctactcttaaatcaaccaattacaacttctaaaccaaatttccaaa 31722583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 21399706 - 21399770
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  21399706 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 21794199 - 21794263
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  21794199 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 22345153 - 22345217
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  22345153 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22345217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 22356813 - 22356877
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  22356813 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22356877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 22610330 - 22610266
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| ||||| ||||||||||||||    
T  22610330 gttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttag 22610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 38184990 - 38184926
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  38184990 atcaataactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 38184926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 22483914 - 22483976
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    ||||||| || | |||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  22483914 caacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaagttagtc 22483976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 21579296 - 21579206
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | |||||||||||||||||||    
T  21579296 aacatcaaaacatattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacacccttacctta 21579206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 36305988 - 36306050
Alignment:
Q  135 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||| ||||||||||||| ||||||| | |||||||| |||||||||| ||||||||||||||    
T  36305988 ttaaaacctttttcagaatcatacaac-cgttattagagaaagctagtctcacccttaccttag 36306050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 39694428 - 39694266
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaag--gttaaaccc 142  Q
    |||||||| |||||| |||||| |||   |||| ||||||||| ||||| |||||||||||||    |||||||| ||||  ||||||   |||||| ||    
T  39694428 ccaattcaacagattctctactattacgacaactaattacaacgtctaaccctaattcccaaattcccaaaacta-caac--ctacaacttgttaaatcc 39694332  T
Q  143 tttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 208  Q
      ||||||||| |||||||| || |||||| |||||||||||| ||||||| ||||| || |||||    
T  39694331 agtttcagaatcatacaacttataattagagaaagctagtcacgcccttacattaggttagtcgat 39694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 22318046 - 22318000
Alignment:
Q  61 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| ||||| |||||||||||||||||||||||||| |||||||    
T  22318046 tctactattaaaccaaccaattacaacttctaaacctaaatcccaaa 22318000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 22474646 - 22474767
Alignment:
Q  34 caattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaac-tatcaacaactacaa 132  Q
    ||||||| | || |||||||||||||||||||||||    ||| |||||  |  ||| || ||||||||  | ||||||||||| ||| |||||||||||    
T  22474646 caattatcaacctaattcatcagattatctactctttcgacaatcaattttagtttcaaaccctaattct-acaacatcaaaacctattaacaactacaa 22474744  T
Q  133 ggttaaaccctttttcagaatta 155  Q
    |||||||||||||||||| ||||    
T  22474745 ggttaaaccctttttcaggatta 22474767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 12037254 - 12037205
Alignment:
Q  107 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  12037254 aacatcaaaagctattaacaactacaaggttaaaccctttttcaggatta 12037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 17906901 - 17906836
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 210  Q
    ||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  17906901 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttaggttaatcgatcg 17906836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 22532283 - 22532222
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaa 106  Q
    |||||||| || ||| |||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  22532283 ccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaa 22532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 22536968 - 22536907
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaa 106  Q
    |||||||| || ||| |||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  22536968 ccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaa 22536907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 29762958 - 29762909
Alignment:
Q  107 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaatta 155  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  29762958 aacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 29762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 18834412 - 18834474
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||| |||| ||||| ||||||  |||||||||| |||||||||| |||||||||||||    
T  18834412 gttaaacccctttt-agaatcatacaatccattattagagaaagctagtcccacccttacctta 18834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 197
Target Start/End: Complemental strand, 20083760 - 20083638
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 173  Q
    ||||||||||||||||| ||||||||||||||||   ||| |||||  | | || || | | ||||| |  |||||||||||||||||| |  ||||||     
T  20083760 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac-atgctaaactcaatttcagaattatacaacttagaattagag 20083662  T
Q  174 aaagctagtcacacccttacctta 197  Q
    |||| ||||| |||||||||||||    
T  20083661 aaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 22966772 - 22966815
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  22966772 aacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 5082334 - 5082301
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  5082334 caaccaattacaacttcaaaacctaattcccaaa 5082301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 17978506 - 17978457
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  17978506 aacatcaaaacctattaacaactacaaggttaaatcctttttcaggatta 17978457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 19140695 - 19140728
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  19140695 caaccaattacaacttcaaaacctaattcccaaa 19140728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 41680223 - 41680174
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  41680223 aacatcaaaacctattaacaactacaaggttaaaccctttatcaggatta 41680174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 2827 - 2934
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  2827 taaacctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 2926  T
Q  191 taccttag 198  Q
    ||||||||    
T  2927 taccttag 2934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 1964 - 2073
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  1964 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 2063  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  2064 cttaccttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 186304 - 186195
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  186304 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 186205  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  186204 cttaccttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 16063697 - 16063804
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||    
T  16063697 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccaccct 16063796  T
Q  191 taccttag 198  Q
    ||||||||    
T  16063797 taccttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 18744818 - 18744927
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||    
T  18744818 tctaaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccacc 18744917  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  18744918 cttaccttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 23199315 - 23199207
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | |||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  23199315 tctaaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccacc 23199216  T
Q  189 cttacctta 197  Q
    |||||||||    
T  23199215 cttacctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 6551396 - 6551289
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||    
T  6551396 taaacctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcaccct 6551297  T
Q  191 taccttag 198  Q
    ||||||||    
T  6551296 taccttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 660752 - 660842
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||| | |||||||||||||    
T  660752 aacatcaaaactaacaacaactacaaggttaaa-cctttttcagaattatacaaccccttattagagaaagctagtc-cccccttaccttagg 660842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 1627176 - 1627071
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttc-agaattatacaactcattattagataaagctagtcacac 187  Q
    ||||| ||||||| | | ||||||||||||| ||| || ||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||| |||    
T  1627176 tctaaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccac 1627077  T
Q  188 ccttac 193  Q
    ||||||    
T  1627076 ccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 26762364 - 26762467
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 205  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| | || | || |||| | || | ||||| ||||||||||||||| |||||    
T  26762364 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacataa-ttatgattaaagaaggttagtcccacccttaccttaggttaatc 26762462  T
Q  206 gatcg 210  Q
    |||||    
T  26762463 gatcg 26762467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 32607379 - 32607315
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  32607379 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 32607315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 1627008 - 1626916
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | |||||||||||||||||||||    
T  1627008 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacacccttaccttagg 1626916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 21914510 - 21914455
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttctcc 234  Q
    ||||| ||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  21914510 tagtcccacccttaccttaggttaatcgatcggcagcctctcctctttggttctcc 21914455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 30138102 - 30138064
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaa 106  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  30138102 ttaaaacaaccaattacaacttctaaacctaattcccaa 30138064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 14025897 - 14025848
Alignment:
Q  107 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  14025897 aacatcaaaatctattaacaactacaaggttaaaccctttttcaggatta 14025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 17876133 - 17876166
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||||||||||||||||||||    
T  17876133 caaccaattacaacttctaaacctaattcccaaa 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 26749993 - 26750085
Alignment:
Q  107 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    |||||||||||| || ||||||||||||||||||||| ||||||| ||||||  ||| || |||| | || | ||||| |||||||||||||||    
T  26749993 aacatcaaaacttattaacaactacaaggttaaaccccttttcaggattata-tacttatgattaaaaaaggttagtctcacccttaccttagg 26750085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 36508761 - 36508633
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 167  Q
    ||||| |||||||||||||||||||||| |||||||||||    ||||||||  | | || ||   |||||| || |||||||||| |||||||| |  |    
T  36508761 ttaaaacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccac-ctgttaaatccattttcagaatcatacaacttagaa 36508663  T
Q  168 ttagataaagctagtcacacccttacctta 197  Q
    ||||| |||| ||||| |||||||||||||    
T  36508662 ttagagaaagttagtctcacccttacctta 36508633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 24068191 - 24068234
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  24068191 aacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 31456884 - 31456923
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  31456884 ttaaaacaaccaattacaacttctaaacctaatttccaaa 31456923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 21398697 - 21398643
Alignment:
Q  144 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||| ||||| ||||||| |||||||||| ||||||| || ||||||||||||||    
T  21398697 tttttagaatcatacaacccattattagagaaagctaatcccacccttaccttag 21398643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 8833296 - 8833247
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  8833296 aacatcaaaacctattaacaactataaggttaaaccctttttcaggatta 8833247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 20313253 - 20313328
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | |||||||||| ||||||||||||| ||| || |||||||  ||||||||| ||||||||||||||    
T  20313253 caacaacaaccatgttaaaccctatttcagaattata-aacccactattaga-gaagctagtcccacccttaccttag 20313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 21300096 - 21300043
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttag 21300043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 21504102 - 21504147
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaa 152  Q
    |||||||||||||  |||||||||||  ||||||||||||||||||    
T  21504102 aacatcaaaactactaacaactacaaacttaaaccctttttcagaa 21504147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 18219 - 18329
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | || |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18219 tctaaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacacc 18318  T
Q  189 cttaccttagg 199  Q
    |||||||||||    
T  18319 cttaccttagg 18329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 3512 - 3421
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  3512 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccacccttaccttag 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 21315566 - 21315475
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  21315566 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 21335356 - 21335265
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  21335356 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 23610570 - 23610680
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||| | ||||||||| ||||||||||| ||||||| ||||||||||| |||||||||| |||||||||| ||||    
T  23610570 tctaaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccacc 23610669  T
Q  189 cttaccttagg 199  Q
    |||||||||||    
T  23610670 cttaccttagg 23610680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 21369237 - 21369346
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | |||||||||||||  |  ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||| ||||    
T  21369237 tctaaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccacc 21369336  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  21369337 cttaccttag 21369346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 149668 - 149500
Alignment:
Q  34 caattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaag 133  Q
    |||||||||||  |||||||| ||||| ||||||||  | ||| |||||  || ||| || ||||||| | | ||||||||||||| ||| ||| ||||     
T  149668 caattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaactaacaa-aacgacaac 149570  T
Q  134 --gttaaaccc---tttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
      |||||||||   ||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  149569 atgttaaaccccttttttttagaattatacaactcattattagagaaagctagttccacccttaccttag 149500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 3539753 - 3539799
Alignment:
Q  61 tctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3539753 tctactcttaaatcaaccaattacaacttctaaacctaattctcaaa 3539799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 25584352 - 25584302
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25584352 aacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 25142121 - 25142166
Alignment:
Q  62 ctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  25142121 ctactcttaattcaaccaattacaacttctaaacctaattcccaaa 25142166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 23801485 - 23801549
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  23801485 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 23801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 19647199 - 19647246
Alignment:
Q  110 atcaaaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  19647199 atcaaaactattaacaactacaagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 20006060 - 20005970
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||| ||| |||||| ||||  |||||||||||||||||||||||  |||||| |||| | || ||||||| ||||||||||||||    
T  20006060 aacatcaaaattattaacaacaacaaaattaaaccctttttcagaattata-gactcatgattaaagaaggctagtcccacccttaccttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 34491316 - 34491239
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcatta-ttagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | |||||||||||||||||||||||||||||| ||| |||||  ||||||||| ||||||||||||||    
T  34491316 caacaacaaccatgttaaaccctttttcagaattatacaactcgttatttaga-gaagctagtcccacccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 28345051 - 28344987
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||| | |||||||||| ||||||||||||||||||| |||||    
T  28345051 gttaaacccctttttagaatcatacagcccattattagagaaagctagtcacacccttatcttag 28344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 357805 - 357844
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  357805 ttaaaacaaccaattacaacttctaaacctaattcccaaa 357844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 1383671 - 1383632
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1383671 ttaaaacaaccaattacaacttctaaacctaattcccaaa 1383632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 28652660 - 28652593
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactac-aaggttaaaccctttttcagaatta 155  Q
    ||||| ||||||| | | ||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  28652660 tctaaccctaatttctataacatcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 19201355 - 19201289
Alignment:
Q  41 taccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||||||    
T  19201355 tacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 19201289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 27852569 - 27852630
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaat-tacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  27852569 caattcaacagatt-tctactcttaaatccaccaatctacaacttctaaatctaattcccaaa 27852630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 24884400 - 24884433
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||||||||||||||||||||    
T  24884400 caaccaattacaacttctaaacctaattcccaaa 24884433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 22251597 - 22251537
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||||||||||||||||    
T  22251597 aattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 22251537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 198
Target Start/End: Original strand, 24516116 - 24516239
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 173  Q
    ||||||||||||||||| ||||||||||||||||    || |||||  | | || || | ||||||| |  |||||||||||||||||| |  ||||||     
T  24516116 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac-atgttaaactcaatttcagaattatacaacttagaattagag 24516214  T
Q  174 aaagctagtcacacccttaccttag 198  Q
    |||| ||||| ||||||||||||||    
T  24516215 aaagttagtcccacccttaccttag 24516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 45535899 - 45535978
Alignment:
Q  118 tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||| ||||| |||||||||||||||||||||||  |||| | |||| | || | ||||| ||||||||||||||    
T  45535899 tatcaacaacaacaagattaaaccctttttcagaattata-gactcgtgattaaagaaggttagtcccacccttaccttag 45535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 5031251 - 5031218
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  5031251 caaccaattacaacttcaaaacctaattcccaaa 5031218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 9975859 - 9975892
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  9975859 caaccaattacaacttcaaaacctaattcccaaa 9975892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 17307416 - 17307449
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  17307416 caaccaattacaacttcaaaacctaattcccaaa 17307449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 17307486 - 17307539
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 17307539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 24780962 - 24780929
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  24780962 caaccaattacaacttcaaaacctaattcccaaa 24780929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 40912320 - 40912373
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  40912320 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40912373  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 5031181 - 5031129
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  5031181 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 24780892 - 24780840
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24780840  T

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Target: scaffold0247 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 1036 - 1128
Alignment:
Q  105 aaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||    
T  1036 aaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 16584 - 16418
Alignment:
Q  34 caattattaccccaattcatcagattatctactcttaaatcaac-caattacaacttctaaacctaattcc-caaaacatcaaaactatcaacaactaca 131  Q
    |||||||||||| ||||||||| |||| ||||||||  | |||  |||||  ||  ||||| ||||||| | | || ||||||| ||| |||||||||||    
T  16584 caattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatcatcaaacctaacaacaactaca 16485  T
Q  132 aggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||||||||||    
T  16484 aggttaaaccctttttcagaattatacaacccattattagataaagttaatctcacccttaccttag 16418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 18777 - 18700
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| || || |||||| |||||||    
T  18777 caacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttag 18700  T

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Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 152
Target Start/End: Complemental strand, 18945 - 18902
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaa 152  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  18945 catcaaaactatcaacaactacaaaattaaaccttttttcagaa 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 14674 - 14585
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  14674 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 23732 - 23643
Alignment:
Q  109 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  23732 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 23643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 17611 - 17520
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||    
T  17611 aacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgacccttaccttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 18048 - 17939
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  18048 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccacc 17949  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  17948 cttaccttag 17939  T

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Target: scaffold0505 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 4898 - 4988
Alignment:
Q  107 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  4898 aacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaac-cattattagagaaagctagtcccacccttacctta 4988  T

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Target: scaffold1256 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 2287 - 2198
Alignment:
Q  110 atcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||  ||||| |||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagg 2198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 5395 - 5303
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |  |||||| |||| ||||| |||||||||||||||    
T  5395 aacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccacccttaccttagg 5303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 2564 - 2454
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaacccttttt--cagaattatacaactcattattagataaagctagtcaca 186  Q
    ||||| ||||||| | | |||||||||||||  ||| |||||||||||||||| |||||  |||||||||||||| |||||||||| |||||||||| ||    
T  2564 tctaaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtccca 2465  T
Q  187 cccttacctta 197  Q
    |||||||||||    
T  2464 cccttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 19169 - 19260
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||||| ||||    
T  19169 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttag 19260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 19123 - 19160
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctt 144  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19123 aacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 5592 - 5685
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttt--tcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  5592 aacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 15723 - 15615
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 188  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||  ||||||||||  ||| ||||| ||||    
T  15723 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattaga-gaagttagtcccacc 15625  T
Q  189 cttaccttag 198  Q
    ||||||||||    
T  15624 cttaccttag 15615  T

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Target: scaffold0108 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 6390 - 6471
Alignment:
Q  117 ctatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||| |||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||    
T  6390 ctataaacaactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttag 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 748 - 661
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttct 232  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  748 tttcagaattatacaacttagaattagagaaagttagtcccacccctaccttaggataattgatcggcagcccttcctctttggttct 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 61937 - 61847
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  61937 aacatcaaaactaacaacaactacaaggttaaatcc-ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 61847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 68331 - 68384
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttct 232  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  68331 tagtcccacccttaccttaagataatcgatcgacagcccttcctctttggttct 68384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 169051 - 168964
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttct 232  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  169051 tttcagaattatacaacttagaattagagaaagttagtcccacccctaccttaggataattgatcggcagcccttcctctttggttct 168964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 174183 - 174286
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 205  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | ||||| ||||||||| ||||| |||||    
T  174183 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacccttactttaggttaatc 174281  T
Q  206 gatcg 210  Q
    |||||    
T  174282 gatcg 174286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 143611 - 143663
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  143611 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 5445 - 5507
Alignment:
Q  136 taaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttag 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 11592 - 11668
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||| || | |||||||||||||||||||||||||||| |||| ||||| |||  ||||| |||||||| ||||    
T  11592 caacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatctta 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 19845 - 19909
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| ||| ||||||  |||||||||||||    
T  19845 gttaaacccctttttagaatcatacaacccattattagagaaatctagtcctacccttaccttag 19909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 11320 - 11353
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  11320 caaccaattacaacttcaaaacctaattcccaaa 11353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 2223 - 2300
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||    
T  2223 caacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 38531 - 38441
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||| |||| | || | ||||||||||||||||||||    
T  38531 aacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcacacccttaccttag 38441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 59761 - 59655
Alignment:
Q  91 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 190  Q
    ||||||||||| | | || ||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||| | || | ||| | ||||||    
T  59761 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattata-tactcatgattaaagaaggttagacccaccct 59663  T
Q  191 taccttag 198  Q
    ||||||||    
T  59662 taccttag 59655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 40253 - 40160
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaatta-taca-actcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| || | |||||| |||||| || | ||||| ||||||||||||||    
T  40253 aacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccacccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 23503 - 23587
Alignment:
Q  114 aaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||| |||||||| ||||||| ||||| |||| ||| ||||||||| |||||||||| ||||||||||  |||||||||||||    
T  23503 aaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 66148 - 66071
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||||||||    
T  66148 caacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttag 66071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 111344 - 111425
Alignment:
Q  129 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 210  Q
    |||| ||||||||| |||| ||||| ||||||| |||||||||| |||||||| | ||||||||||||||  ||||||||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttagattaatcgatcg 111425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 73076 - 73139
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| ||||| |||||||||||||    
T  73076 gttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 75926 - 75990
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| ||||||| || |||||||||| ||||||||||||||    
T  75926 gttaaacccctttttagaatcatacaacccattattggagaaagctagtcccacccttaccttag 75990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 328412 - 328379
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  328412 caaccaattacaacttcgaaacctaattcccaaa 328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 359 - 423
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  359 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 22519 - 22463
Alignment:
Q  177 gctagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttctc 233  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  22519 gctagtctcacccttaccttagaataatcgatcggcagcccttcctctttggttctc 22463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 3167 - 3257
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  3167 aacatcaaaactatcaacaactacaaaattaaaccctttttcataattata-tactcatgattaaagaaggttagtcccacccttaccttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 26689 - 26776
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacc 194  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||  |  |||||| |||| || || ||||||||||    
T  26689 aacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatcccacccttacc 26776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 23576 - 23666
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||| |||||||||||  ||||||||||||| |||||||||  |||||| |||| | || |  |||| ||||||||||||||    
T  23576 aacatcaaaactattaacaactacaaaattaaacccttttttagaattata-tactcatgattaaagaaggtcagtcccacccttaccttag 23666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 35262 - 35185
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | |||||||||||||| ||||||||||||| |||||||||  |||||||||  ||||||||||||||    
T  35262 caacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 10570 - 10633
Alignment:
Q  119 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 183  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  10570 atcaacaactacaatgttaaaccctttttcagaattatacaac-catctttagagaaagctagtc 10633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 7603 - 7513
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||| |||  |||||| |||| | || | ||||| ||||||||||||||    
T  7603 aacatcaaaactatcaacaactataaaattaaaccctttttcagaatcata-tactcataattaaagaaggttagtcccacccttaccttag 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 8731 - 8897
Alignment:
Q  34 caattattaccccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaa--caactaca 131  Q
    |||||||||||  |||||||| ||||| ||||||||  | ||| |||||  || ||| |||||||||| |  ||| ||||||| || |||  |||| |||    
T  8731 caattattaccttaattcatctgattacctactctttcaacaatcaattttaatttcaaaacctaatttctcaaaaatcaaaattaacaaaacaacaaca 8830  T
Q  132 aggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
     | | || ||| |||||||||| ||||||  ||||||||||||||||||||| |||||||| |||||    
T  8831 tgttaaacccccttttcagaatcatacaatccattattagataaagctagtcccacccttaacttag 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 117951 - 117889
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaa 108  Q
    ||||||||  ||||| |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  117951 ccaattcaatagattttctactgttaaa-caaccaattacaacttctaaacctaattcccaaaa 117889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 113118 - 113057
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||||||| || ||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  113118 ccaattcaacaaattttctactgttaaa-caaccaattacaacttctaaacctaattcccaaa 113057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 107
Target Start/End: Original strand, 81501 - 81530
Alignment:
Q  78 caattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||||||||||||||||    
T  81501 caattacaacttctaaacctaattcccaaa 81530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 1208 - 1148
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||    
T  1208 caattcaacagatt-tctactcttaaatcaactaattacaacttctaaccctaaatcccaaa 1148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 20234 - 20174
Alignment:
Q  47 aattcatcagattatctactcttaaatcaaccaa-ttacaacttctaaacctaattcccaaa 107  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  20234 aattcaacagatt-tctactcttaaatcaaccaaattacaacttctaaacataattcccaaa 20174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 10536 - 10433
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 205  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||| |||| |  ||| || |||| | || | ||||| ||||||||||||||| |||||    
T  10536 aacatcaaaacctattaacaactacaatgttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacccttaccttaggttaatc 10438  T
Q  206 gatcg 210  Q
    |||||    
T  10437 gatcg 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 127406 - 127342
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||  |||||||||| |||||||||| ||||||||||||||    
T  127406 gttaaacccctttttagaatcatacaatccattattagagaaagctagtcccacccttaccttag 127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 108208 - 108255
Alignment:
Q  61 tctactcttaaatcaaccaattac-aacttctaaacctaattcccaaa 107  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||    
T  108208 tctactcttaaatcaaccaatttccaacttctaaacctaattcccaaa 108255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 10937 - 10999
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||||||  |||||||||||||    
T  10937 gttaaacccttttt-agaatcatacaacccattattagagaaagctagttccacccttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 8544 - 8598
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaatt 101  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||||| |||||||    
T  8544 caattcaacagatt-tctactattaaatcaaccaattacaacttctaaccctaatt 8598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Original strand, 28513 - 28564
Alignment:
Q  107 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattata 157  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  28513 aacataaaaactaacaacaactacaaaggttaaaccctttttcagaattata 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 17075 - 17118
Alignment:
Q  114 aaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  17075 aaactatcaacaactacaaagttaaaccctttttaagaattata 17118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 26606 - 26649
Alignment:
Q  114 aaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  26606 aaactatcaacaactacaaagttaaaccctttttaagaattata 26649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 2160 - 2110
Alignment:
Q  57 attatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    |||| ||||| ||||| |||||||||||||||| |||||||||||||||||    
T  2160 attagctactattaaaccaaccaattacaacttataaacctaattcccaaa 2110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 8811 - 8745
Alignment:
Q  132 aggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||| ||||| |||| ||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  8811 aggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacccttaccttag 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 28664 - 28726
Alignment:
Q  95 cctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 157  Q
    ||||||||| | ||||  |||||||| |||||||||||| |||||| ||||||||||||||||    
T  28664 cctaattcctataacaataaaactattaacaactacaagattaaacgctttttcagaattata 28726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 23990 - 23932
Alignment:
Q  89 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaacccttttt 147  Q
    ||||| ||||||| | | |||||||||||||  ||||||||||||||||||||||||||    
T  23990 tctaaccctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 10904 - 10842
Alignment:
Q  45 ccaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||  ||||| |||||| ||| | |||||||||||||||||||| |||||||||||||    
T  10904 ccaattcaatagattctctactattacaacaaccaattacaacttctaaccctaattcccaaa 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 5156 - 5124
Alignment:
Q  75 aaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||||| |||||||||||||    
T  5156 aaccaattacaacttctaaccctaattcccaaa 5124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 307 - 356
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  307 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 10780 - 10727
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcccttcctctttgcttct 232  Q
    ||||| |||||||||||||||||||||||||||| |||  ||||||||| ||||    
T  10780 tagtcccacccttaccttaggataatcgatcggcggcctctcctctttggttct 10727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 161 - 199
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaa 106  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  161 ttaaaacaaccaattacaacttctaaacctaatttccaa 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 198
Target Start/End: Original strand, 68 - 191
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagat 173  Q
    ||||||||||||||||| ||||||||||||||||    || |||||  | | || || | ||||||| |  |||||||||||||||||| |  ||||||     
T  68 caaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac-atgttaaactcaatttcagaattatacaacttagaattagag 166  T
Q  174 aaagctagtcacacccttaccttag 198  Q
    |||| ||||| ||||||||||||||    
T  167 aaagttagtcccacccttaccttag 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 40096 - 40160
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||| ||||| || |||||||||||    
T  40096 gttaaacccctttttagaatcatacaacccattattagagaaagttagtcgcatccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 68789 - 68725
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||| |||| ||||| ||| ||| |||||||||| |||| ||||| ||||||||||||||    
T  68789 gttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttag 68725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 43848 - 43786
Alignment:
Q  134 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||| ||||||||||||| ||| |||||||||| || ||||||| ||||||||||||||    
T  43848 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 43786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 31994 - 32046
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  31994 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 32046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 37301 - 37353
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  37301 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 37353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 31924 - 31957
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  31924 caaccaattacaacttcaaaacctaattcccaaa 31957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 37231 - 37264
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  37231 caaccaattacaacttcaaaacctaattcccaaa 37264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 77687 - 77740
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  77687 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 77740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 499092 - 499129
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcc 216  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  499092 tagtcccacccttaccttaggataatcgattggcagcc 499129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 570 - 660
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||| |||||||||| ||||  ||||||| ||||| ||||||||| | ||||| |||| | || | ||||| ||||||||||||||    
T  570 aacatcaaaattatcaacaacaacaaaattaaaccatttttaagaattataga-ctcatgattaaagaaggttagtcccacccttaccttag 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 103
Target Start/End: Complemental strand, 6813 - 6778
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcc 103  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6813 ttaaaacaaccaattacaacttctaaacctaattcc 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 31892 - 31982
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||| |||  |||||| |||| | |  | ||||| ||||||||||||||    
T  31892 aacatcaaaactattaacaactataaaattaaaccctttttcagaatcata-tactcatgattaaagatggttagtctcacccttaccttag 31982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 16528 - 16567
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  16528 ttaaaacaaccaattacaacttctaaacctaattgccaaa 16567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 21535 - 21574
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  21535 ttaaaacaaccaattacaacttctaaacataattcccaaa 21574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 29695 - 29662
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  29695 caaccaattacaacttcaaaacctaattcccaaa 29662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 8086 - 8129
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  8086 aacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 29273 - 29316
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  29273 aacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 49692 - 49782
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||||||||||||||||  | ||  ||||||||||||||||||||||   |||||| |||| | || | ||||| ||||||||||||||    
T  49692 aacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattat-ggactcatgattaaagaaggttagtcccacccttaccttag 49782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 106179 - 106140
Alignment:
Q  68 ttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  106179 ttaaaacaaccaattacaacgtctaaacctaattcccaaa 106140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 1279 - 1313
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaacc 141  Q
    ||||||||||||||||||||||| |||||||||||    
T  1279 aacatcaaaactatcaacaactataaggttaaacc 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 6785 - 6819
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaacc 141  Q
    ||||||||||||||||||||||| |||||||||||    
T  6785 aacatcaaaactatcaacaactataaggttaaacc 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 90 - 135
Alignment:
Q  107 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaa 152  Q
    |||||||||||||| |||||||||||  | ||||||||||||||||    
T  90 aacatcaaaactattaacaactacaaattaaaaccctttttcagaa 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 1135 - 1168
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  1135 caaccaattacaacttcaaaacctaattcccaaa 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 1205 - 1257
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 590 - 557
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  590 caaccaattacaacttcaaaacctaattcccaaa 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 520 - 468
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 4585 - 4645
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| || ||| ||||| |||| |||||||||||||||||||||||| ||||    
T  4585 caattcaacagattttc-actattaaaccaactaattacaacttctaaacctaattctcaaa 4645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 4836 - 4803
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  4836 caaccaattacaacttcaaaacctaattcccaaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 1095 - 1128
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  1095 caaccaattacaacttcaaaacctaattcccaaa 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 1165 - 1218
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||  |||| ||||||||||||||||||||    
T  1165 tttcagaattatacaacttagaattaggaaaagttagtcacacccttaccttag 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 9025 - 9074
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| ||||    
T  9025 aacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 9074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 4383 - 4475
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 199  Q
    ||||||||||| ||| |||||||||||||||||||| |||||| | ||||||  ||| || |||| | || | ||||| |||||||||||||||    
T  4383 aacatcaaaacctattaacaactacaaggttaaaccttttttcgggattata-tacttatgattaaagaaggttagtcccacccttaccttagg 4475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 6509 - 6468
Alignment:
Q  107 aacatcaaaactatcaacaactac-aaggttaaacccttttt 147  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  6509 aacatcaaaactaacaacaactacaaaggttaaacccttttt 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 2494 - 2527
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  2494 caaccaattacaacttcaaaacctaattcccaaa 2527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 3112 - 3145
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  3112 caaccaattacaacttcaaaacctaattcccaaa 3145  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 5690 - 5615
Alignment:
Q  121 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    ||||||| || | |||||| ||| ||||||||||||| ||| |||||||||| || ||||||| ||||||||||||||    
T  5690 caacaacaaccatgttaaatcctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 5615  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 35490 - 35543
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 198  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  35490 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 35543  T

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Target: scaffold0111 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 12655 - 12622
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  12655 caaccaattacaacttcaaaacctaattcccaaa 12622  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 21915 - 21882
Alignment:
Q  74 caaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  21915 caaccaattacaacttcaaaacctaattcccaaa 21882  T

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Target: scaffold0065 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 55975 - 56012
Alignment:
Q  179 tagtcacacccttaccttaggataatcgatcggcagcc 216  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  55975 tagtctcacccttaccttaggataatcgattggcagcc 56012  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 62680 - 62729
Alignment:
Q  107 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 155  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||| ||||    
T  62680 aacatcaaaacctattaacaaccacaaggttaaaccctttttcaggatta 62729  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 3201 - 3145
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcc 103  Q
    ||||||| |||||| |||||  || ||||||||||||||||||||||| |||||||||    
T  3201 caattcaacagatt-tctaccatttaatcaaccaattacaacttctaaccctaattcc 3145  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 135653 - 135593
Alignment:
Q  46 caattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaa 107  Q
    ||||||| |||||| |||||| |||||| |||||||| ||||||||||  ||||||||||||    
T  135653 caattcaacagatt-tctactattaaattaaccaatttcaacttctaactctaattcccaaa 135593  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 20159 - 20199
Alignment:
Q  105 aaaacatcaaaac-tatcaacaactacaaggttaaaccctt 144  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  20159 aaaacatcaaaacctattaacaactacaaggttaaaccctt 20199  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 79049 - 79101
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  79049 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 79101  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 78237 - 78185
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 24183 - 24131
Alignment:
Q  145 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 197  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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