View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_299 (Length: 238)

Name: NF8912A_low_299
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_299
NF8912A_low_299
[»] chr6 (38 HSPs)
chr6 (59-233)||(16231816-16231990)
chr6 (59-233)||(18086981-18087155)
chr6 (59-233)||(13620952-13621126)
chr6 (59-233)||(23977693-23977867)
chr6 (108-211)||(32276944-32277046)
chr6 (120-211)||(16300161-16300252)
chr6 (102-211)||(4991037-4991147)
chr6 (59-144)||(16556386-16556471)
chr6 (59-144)||(16632942-16633027)
chr6 (59-144)||(22225985-22226070)
chr6 (4-62)||(18086802-18086860)
chr6 (59-144)||(10488623-10488708)
chr6 (59-144)||(16376620-16376705)
chr6 (59-144)||(16383944-16384029)
chr6 (59-124)||(35015425-35015490)
chr6 (119-211)||(19629314-19629405)
chr6 (64-124)||(19983559-19983619)
chr6 (4-62)||(1556224-1556282)
chr6 (4-62)||(13620773-13620831)
chr6 (4-62)||(16232111-16232169)
chr6 (4-62)||(19610237-19610295)
chr6 (4-62)||(22251545-22251603)
chr6 (95-211)||(18381855-18381972)
chr6 (4-62)||(10488918-10488976)
chr6 (4-62)||(16376352-16376410)
chr6 (4-62)||(16383676-16383734)
chr6 (4-62)||(22225717-22225775)
chr6 (4-62)||(23977988-23978046)
chr6 (4-62)||(16556118-16556176)
chr6 (4-62)||(16632674-16632732)
chr6 (4-62)||(19299456-19299514)
chr6 (103-211)||(25651203-25651312)
chr6 (11-62)||(16825727-16825778)
chr6 (117-211)||(19854135-19854230)
chr6 (102-211)||(22361937-22362047)
chr6 (107-211)||(29605420-29605525)
chr6 (103-211)||(34966833-34966942)
chr6 (14-62)||(25175792-25175840)
[»] chr3 (40 HSPs)
chr3 (59-233)||(18910917-18911091)
chr3 (59-211)||(16934154-16934306)
chr3 (108-211)||(11477371-11477474)
chr3 (108-211)||(8268925-8269027)
chr3 (108-211)||(8276025-8276127)
chr3 (107-211)||(9303280-9303385)
chr3 (59-144)||(49232360-49232445)
chr3 (108-211)||(14284933-14285036)
chr3 (4-62)||(18911212-18911270)
chr3 (59-144)||(1467986-1468071)
chr3 (4-62)||(12264771-12264829)
chr3 (4-62)||(25058958-25059016)
chr3 (4-62)||(49232655-49232713)
chr3 (59-124)||(17956252-17956317)
chr3 (59-123)||(16821063-16821127)
chr3 (4-62)||(18897023-18897081)
chr3 (4-62)||(22275428-22275486)
chr3 (4-62)||(54651676-54651734)
chr3 (4-62)||(1467718-1467776)
chr3 (4-62)||(15468319-15468377)
chr3 (4-62)||(44229204-44229262)
chr3 (4-62)||(12812060-12812118)
chr3 (4-62)||(12902069-12902127)
chr3 (5-62)||(5228533-5228589)
chr3 (107-211)||(6228797-6228902)
chr3 (107-211)||(12952934-12953039)
chr3 (11-62)||(41270301-41270352)
chr3 (59-98)||(45581397-45581436)
chr3 (11-62)||(55316445-55316496)
chr3 (114-211)||(4162377-4162475)
chr3 (59-104)||(28557972-28558017)
chr3 (66-103)||(54038569-54038606)
chr3 (22-62)||(15936614-15936654)
chr3 (152-211)||(12488898-12488957)
chr3 (160-211)||(38811180-38811231)
chr3 (117-211)||(41661545-41661640)
chr3 (20-62)||(15615068-15615110)
chr3 (102-211)||(34559864-34559974)
chr3 (30-62)||(15938456-15938488)
chr3 (115-210)||(47784920-47785016)
[»] chr8 (44 HSPs)
chr8 (59-233)||(13721086-13721260)
chr8 (59-233)||(16873209-16873383)
chr8 (59-211)||(3431461-3431613)
chr8 (108-211)||(22886298-22886402)
chr8 (108-211)||(18612379-18612481)
chr8 (108-211)||(18619284-18619386)
chr8 (108-211)||(21494629-21494732)
chr8 (59-144)||(15319406-15319491)
chr8 (59-144)||(15499775-15499860)
chr8 (59-139)||(22006510-22006590)
chr8 (59-144)||(13662512-13662597)
chr8 (108-211)||(22147411-22147513)
chr8 (4-62)||(13720907-13720965)
chr8 (59-144)||(271607-271692)
chr8 (59-144)||(644228-644313)
chr8 (59-144)||(829963-830048)
chr8 (4-62)||(22006237-22006295)
chr8 (59-124)||(24717130-24717195)
chr8 (76-144)||(22089041-22089109)
chr8 (4-62)||(13662244-13662302)
chr8 (4-62)||(271339-271397)
chr8 (4-62)||(644523-644581)
chr8 (4-62)||(830258-830316)
chr8 (4-62)||(16873030-16873088)
chr8 (95-211)||(23837156-23837273)
chr8 (7-62)||(16195453-16195508)
chr8 (4-62)||(15319138-15319196)
chr8 (4-62)||(15499507-15499565)
chr8 (4-62)||(22088773-22088831)
chr8 (95-203)||(2544909-2545016)
chr8 (117-211)||(38635820-38635915)
chr8 (102-211)||(26011459-26011569)
chr8 (59-104)||(39115041-39115087)
chr8 (107-211)||(27233239-27233344)
chr8 (100-211)||(21198324-21198436)
chr8 (116-211)||(38533628-38533724)
chr8 (11-62)||(30120948-30120999)
chr8 (59-104)||(4233826-4233872)
chr8 (102-211)||(5854579-5854689)
chr8 (59-104)||(17502112-17502158)
chr8 (107-211)||(37653788-37653891)
chr8 (103-211)||(18041704-18041813)
chr8 (107-211)||(18261643-18261748)
chr8 (107-211)||(33611225-33611330)
[»] chr4 (29 HSPs)
chr4 (59-233)||(7132223-7132397)
chr4 (59-233)||(20000647-20000821)
chr4 (108-211)||(8044913-8045017)
chr4 (108-211)||(14996100-14996202)
chr4 (108-211)||(19697553-19697655)
chr4 (108-211)||(19708138-19708240)
chr4 (102-211)||(16522783-16522893)
chr4 (59-145)||(18168894-18168980)
chr4 (102-211)||(9295659-9295769)
chr4 (4-62)||(7132044-7132102)
chr4 (59-124)||(5682795-5682860)
chr4 (59-124)||(25119476-25119541)
chr4 (4-62)||(8378370-8378428)
chr4 (4-62)||(18169189-18169247)
chr4 (4-62)||(19020705-19020763)
chr4 (108-188)||(32460880-32460960)
chr4 (4-62)||(18248437-18248495)
chr4 (4-62)||(20000942-20001000)
chr4 (117-211)||(15044808-15044903)
chr4 (117-211)||(15109521-15109616)
chr4 (4-62)||(15287224-15287282)
chr4 (4-62)||(15294333-15294391)
chr4 (11-62)||(47357880-47357931)
chr4 (4-62)||(17145636-17145694)
chr4 (129-206)||(9795207-9795283)
chr4 (107-211)||(40905105-40905210)
chr4 (108-144)||(19020459-19020495)
chr4 (59-104)||(15213877-15213923)
chr4 (4-62)||(22738488-22738546)
[»] chr2 (44 HSPs)
chr2 (59-233)||(12636026-12636200)
chr2 (59-233)||(8943770-8943944)
chr2 (59-233)||(12641800-12641974)
chr2 (59-233)||(42178127-42178301)
chr2 (59-233)||(3798761-3798935)
chr2 (108-211)||(28031419-28031523)
chr2 (108-211)||(15633186-15633288)
chr2 (64-144)||(24686028-24686108)
chr2 (59-144)||(12728316-12728401)
chr2 (130-211)||(25213042-25213123)
chr2 (59-144)||(34824399-34824484)
chr2 (109-211)||(17204303-17204406)
chr2 (4-62)||(8944065-8944123)
chr2 (59-145)||(22274645-22274731)
chr2 (102-211)||(24826899-24827009)
chr2 (59-144)||(11231585-11231670)
chr2 (64-145)||(22283883-22283964)
chr2 (59-144)||(22513432-22513517)
chr2 (59-144)||(28776054-28776139)
chr2 (4-62)||(12635847-12635905)
chr2 (4-62)||(12728611-12728669)
chr2 (4-62)||(34824694-34824752)
chr2 (4-62)||(42177948-42178006)
chr2 (4-62)||(21142114-21142172)
chr2 (4-62)||(23778024-23778082)
chr2 (115-211)||(3413-3509)
chr2 (4-62)||(3798582-3798640)
chr2 (4-62)||(11231317-11231375)
chr2 (4-62)||(12641621-12641679)
chr2 (4-62)||(16935812-16935870)
chr2 (4-62)||(17006472-17006530)
chr2 (102-211)||(19433504-19433614)
chr2 (4-62)||(22513164-22513222)
chr2 (4-62)||(24685760-24685818)
chr2 (4-62)||(28775786-28775844)
chr2 (109-174)||(22256270-22256332)
chr2 (11-62)||(19886636-19886687)
chr2 (4-49)||(7507844-7507889)
chr2 (100-211)||(25305408-25305520)
chr2 (59-104)||(22775457-22775503)
chr2 (59-104)||(22780835-22780881)
chr2 (103-211)||(67958-68067)
chr2 (103-211)||(23821777-23821886)
chr2 (103-211)||(23830856-23830965)
[»] chr7 (37 HSPs)
chr7 (59-233)||(15927492-15927666)
chr7 (59-233)||(14251056-14251230)
chr7 (59-233)||(18980179-18980353)
chr7 (59-233)||(13758294-13758468)
chr7 (59-211)||(371012-371164)
chr7 (63-144)||(15951038-15951119)
chr7 (59-122)||(1937270-1937333)
chr7 (59-144)||(7822652-7822737)
chr7 (59-144)||(7829963-7830048)
chr7 (59-144)||(27101884-27101969)
chr7 (59-144)||(27109232-27109317)
chr7 (59-144)||(27176357-27176442)
chr7 (59-144)||(38783976-38784061)
chr7 (4-62)||(15950770-15950828)
chr7 (4-62)||(18980000-18980058)
chr7 (4-62)||(14250877-14250935)
chr7 (4-62)||(15760093-15760151)
chr7 (4-62)||(15927787-15927845)
chr7 (103-211)||(13377495-13377604)
chr7 (4-62)||(7822947-7823005)
chr7 (4-62)||(7830258-7830316)
chr7 (4-62)||(13758589-13758647)
chr7 (4-62)||(27101616-27101674)
chr7 (4-62)||(27108964-27109022)
chr7 (4-62)||(27176652-27176710)
chr7 (4-62)||(38783708-38783766)
chr7 (95-211)||(17224110-17224227)
chr7 (59-104)||(32494490-32494535)
chr7 (4-61)||(48622646-48622703)
chr7 (11-62)||(2437683-2437734)
chr7 (11-62)||(13910999-13911050)
chr7 (22-62)||(18253822-18253862)
chr7 (11-62)||(10989635-10989686)
chr7 (117-211)||(20583726-20583821)
chr7 (110-211)||(15358770-15358872)
chr7 (102-211)||(48356609-48356719)
chr7 (163-211)||(13274814-13274862)
[»] chr5 (40 HSPs)
chr5 (59-233)||(10778128-10778302)
chr5 (59-233)||(23514485-23514659)
chr5 (59-211)||(9730563-9730715)
chr5 (108-211)||(7528872-7528975)
chr5 (102-211)||(109013-109123)
chr5 (102-211)||(16105608-16105718)
chr5 (59-144)||(1219767-1219852)
chr5 (59-144)||(22883331-22883416)
chr5 (108-211)||(17909478-17909580)
chr5 (59-144)||(21932628-21932713)
chr5 (59-144)||(21938798-21938883)
chr5 (59-144)||(35581960-35582045)
chr5 (59-144)||(36990017-36990102)
chr5 (4-62)||(1219499-1219557)
chr5 (4-62)||(10777949-10778007)
chr5 (4-62)||(23514780-23514838)
chr5 (4-62)||(11212044-11212102)
chr5 (4-62)||(17471567-17471625)
chr5 (4-62)||(22883063-22883121)
chr5 (4-62)||(35791077-35791135)
chr5 (4-62)||(7425543-7425601)
chr5 (4-62)||(21932360-21932418)
chr5 (4-62)||(21938530-21938588)
chr5 (4-62)||(35582255-35582313)
chr5 (103-211)||(23493885-23493994)
chr5 (4-62)||(36989749-36989807)
chr5 (11-62)||(12600-12651)
chr5 (11-62)||(25426854-25426905)
chr5 (103-211)||(3673828-3673937)
chr5 (11-62)||(4199960-4200011)
chr5 (103-209)||(5451017-5451124)
chr5 (11-62)||(18777967-18778018)
chr5 (11-62)||(19500125-19500176)
chr5 (11-62)||(21073570-21073621)
chr5 (11-62)||(22366456-22366507)
chr5 (105-211)||(23981688-23981794)
chr5 (59-104)||(28902140-28902186)
chr5 (59-104)||(28938535-28938581)
chr5 (115-211)||(7728398-7728495)
chr5 (152-209)||(29917981-29918038)
[»] chr1 (22 HSPs)
chr1 (59-233)||(17148491-17148665)
chr1 (59-211)||(21650220-21650372)
chr1 (59-144)||(18060005-18060090)
chr1 (4-62)||(46523608-46523666)
chr1 (59-144)||(17004562-17004647)
chr1 (59-144)||(38055338-38055423)
chr1 (59-124)||(44035238-44035303)
chr1 (4-62)||(18059737-18059795)
chr1 (4-62)||(17004857-17004915)
chr1 (4-62)||(17148786-17148844)
chr1 (4-62)||(22228027-22228085)
chr1 (4-62)||(22232724-22232782)
chr1 (95-211)||(20177133-20177250)
chr1 (4-62)||(19962478-19962536)
chr1 (11-62)||(5072363-5072414)
chr1 (152-211)||(36356465-36356524)
chr1 (95-211)||(13377012-13377129)
chr1 (95-211)||(41229111-41229228)
chr1 (11-62)||(18601093-18601144)
chr1 (59-98)||(21859214-21859253)
chr1 (59-104)||(16656587-16656633)
chr1 (4-62)||(38055070-38055128)
[»] scaffold0615 (1 HSPs)
scaffold0615 (109-211)||(6396-6498)
[»] scaffold0029 (1 HSPs)
scaffold0029 (108-211)||(50028-50131)
[»] scaffold0335 (1 HSPs)
scaffold0335 (107-211)||(5761-5865)
[»] scaffold0173 (1 HSPs)
scaffold0173 (108-211)||(5194-5296)
[»] scaffold0207 (1 HSPs)
scaffold0207 (108-203)||(17673-17768)
[»] scaffold0162 (1 HSPs)
scaffold0162 (120-211)||(11730-11820)
[»] scaffold0028 (1 HSPs)
scaffold0028 (102-211)||(130521-130631)
[»] scaffold0107 (4 HSPs)
scaffold0107 (59-144)||(39570-39655)
scaffold0107 (59-144)||(31233-31318)
scaffold0107 (4-62)||(39865-39923)
scaffold0107 (4-62)||(31528-31586)
[»] scaffold0076 (2 HSPs)
scaffold0076 (59-144)||(39027-39112)
scaffold0076 (4-62)||(39322-39380)
[»] scaffold0023 (4 HSPs)
scaffold0023 (59-144)||(154254-154339)
scaffold0023 (4-62)||(153986-154044)
scaffold0023 (11-62)||(169887-169938)
scaffold0023 (11-62)||(36319-36370)
[»] scaffold0213 (2 HSPs)
scaffold0213 (66-144)||(29093-29171)
scaffold0213 (4-62)||(29381-29439)
[»] scaffold0184 (1 HSPs)
scaffold0184 (59-124)||(31548-31613)
[»] scaffold0078 (1 HSPs)
scaffold0078 (59-124)||(41231-41296)
[»] scaffold0001 (1 HSPs)
scaffold0001 (108-211)||(165146-165245)
[»] scaffold1500 (2 HSPs)
scaffold1500 (4-62)||(1493-1551)
scaffold1500 (173-233)||(1672-1732)
[»] scaffold0369 (1 HSPs)
scaffold0369 (4-62)||(3941-3999)
[»] scaffold0686 (1 HSPs)
scaffold0686 (59-124)||(6351-6416)
[»] scaffold0016 (2 HSPs)
scaffold0016 (59-124)||(162447-162512)
scaffold0016 (59-124)||(166525-166590)
[»] scaffold0118 (1 HSPs)
scaffold0118 (108-188)||(34597-34677)
[»] scaffold0092 (1 HSPs)
scaffold0092 (11-62)||(10727-10778)
[»] scaffold0191 (1 HSPs)
scaffold0191 (4-62)||(7435-7493)
[»] scaffold0342 (2 HSPs)
scaffold0342 (59-122)||(721-783)
scaffold0342 (103-211)||(5906-6015)
[»] scaffold0139 (1 HSPs)
scaffold0139 (11-62)||(21091-21142)
[»] scaffold0066 (2 HSPs)
scaffold0066 (3-62)||(45248-45307)
scaffold0066 (4-62)||(54635-54693)
[»] scaffold0761 (1 HSPs)
scaffold0761 (4-62)||(1554-1612)
[»] scaffold0467 (1 HSPs)
scaffold0467 (4-62)||(10318-10376)
[»] scaffold0383 (2 HSPs)
scaffold0383 (4-62)||(2611-2669)
scaffold0383 (103-208)||(7137-7243)
[»] scaffold0022 (1 HSPs)
scaffold0022 (4-62)||(5191-5249)
[»] scaffold0970 (1 HSPs)
scaffold0970 (103-211)||(2421-2530)
[»] scaffold0077 (2 HSPs)
scaffold0077 (59-104)||(15910-15955)
scaffold0077 (107-211)||(6514-6619)
[»] scaffold0529 (1 HSPs)
scaffold0529 (11-62)||(3188-3239)
[»] scaffold0012 (1 HSPs)
scaffold0012 (4-59)||(34140-34195)
[»] scaffold0020 (1 HSPs)
scaffold0020 (117-211)||(107991-108085)
[»] scaffold0017 (1 HSPs)
scaffold0017 (4-62)||(54093-54151)
[»] scaffold0521 (2 HSPs)
scaffold0521 (59-104)||(10877-10922)
scaffold0521 (117-211)||(11074-11169)
[»] scaffold0053 (1 HSPs)
scaffold0053 (95-211)||(77019-77136)
[»] scaffold0039 (1 HSPs)
scaffold0039 (59-104)||(19345-19390)
[»] scaffold0034 (3 HSPs)
scaffold0034 (59-104)||(40446-40491)
scaffold0034 (59-104)||(45929-45974)
scaffold0034 (64-104)||(79632-79672)
[»] scaffold1711 (1 HSPs)
scaffold1711 (11-62)||(1279-1330)
[»] scaffold0892 (1 HSPs)
scaffold0892 (11-62)||(3639-3690)
[»] scaffold0387 (1 HSPs)
scaffold0387 (117-211)||(1118-1213)
[»] scaffold0032 (1 HSPs)
scaffold0032 (95-206)||(13472-13582)
[»] scaffold0150 (1 HSPs)
scaffold0150 (102-211)||(28501-28611)
[»] scaffold0080 (1 HSPs)
scaffold0080 (102-211)||(43970-44080)
[»] scaffold0447 (2 HSPs)
scaffold0447 (103-211)||(4529-4638)
scaffold0447 (103-211)||(9143-9252)
[»] scaffold0243 (1 HSPs)
scaffold0243 (103-211)||(2488-2597)
[»] scaffold0103 (1 HSPs)
scaffold0103 (59-104)||(33429-33474)
[»] scaffold0026 (1 HSPs)
scaffold0026 (22-62)||(107983-108023)
[»] scaffold0516 (1 HSPs)
scaffold0516 (19-62)||(12106-12149)
[»] scaffold0148 (1 HSPs)
scaffold0148 (117-211)||(37538-37633)
[»] scaffold0008 (1 HSPs)
scaffold0008 (11-62)||(31650-31701)
[»] scaffold1204 (1 HSPs)
scaffold1204 (59-104)||(344-390)
[»] scaffold0193 (1 HSPs)
scaffold0193 (110-211)||(4578-4680)
[»] scaffold0009 (1 HSPs)
scaffold0009 (102-211)||(69422-69532)
[»] scaffold0670 (1 HSPs)
scaffold0670 (103-211)||(7847-7956)
[»] scaffold0253 (2 HSPs)
scaffold0253 (107-211)||(7372-7477)
scaffold0253 (107-211)||(16797-16902)
[»] scaffold0065 (1 HSPs)
scaffold0065 (103-207)||(68058-68162)


Alignment Details
Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 16231816 - 16231990
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16231816 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaac 16231915  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  16231916 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 16231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 18087155 - 18086981
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  18087155 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaccaacatcttatttctcatcaacaattatgatatatgaac 18087056  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  18087055 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 18086981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 13621126 - 13620952
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  13621126 ttcaatttggtccttcacatgaacacttaactcaacttcattaatttcacaaaaccaccaacaacatcttattgctcatcaacaattatggtatatgaac 13621027  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  13621026 acccaagtcataattcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 13620952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 23977693 - 23977867
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  23977693 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaac 23977792  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  23977793 acccaagcctcaaatcatactcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 23977867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 32277046 - 32276944
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    |||||||||||||| |||||||||||||| ||||||| ||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  32277046 caaaacaaccaacagcatcttatttctcaccaacaatcatgatatatgaacacccaagccat-aatcataaacaacaacatatctcagcaacaacaacat 32276948  T
Q  208 caat 211  Q
    ||||    
T  32276947 caat 32276944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 16300252 - 16300161
Alignment:
Q  120 caacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16300252 caacatcttatttttcatcaacaatcatgatatatgaacacccaagccataaatcatatacaacaacatatctcagcaacaacaacatcaat 16300161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 4991037 - 4991147
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || |||| |||| ||||||| ||| ||||||||| ||||||||| || |||| |||||||||||||||||||||||    
T  4991037 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccaaaattcatgatcaacaacatatctcagcaaca 4991136  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  4991137 acaacatcaat 4991147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 16556471 - 16556386
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  16556471 ttcattttggtccttcacatgaacacttaactcaactttaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 16556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 16633027 - 16632942
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  16633027 ttcattttggtccttcacatgaacacttaactcaactttaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 16632942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 22226070 - 22225985
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |  ||||||||||||| ||||    
T  22226070 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaagaatttatttctcatcatcaat 22225985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 18086860 - 18086802
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18086860 aaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 18086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 10488623 - 10488708
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  10488623 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 10488708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 16376705 - 16376620
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  16376705 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 16376620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 16384029 - 16383944
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  16384029 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 16383944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 35015490 - 35015425
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  35015490 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 35015425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 19629314 - 19629405
Alignment:
Q  119 acaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||| || |||||||| ||||||| ||| ||||||||| |||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  19629314 acaacaactcatttctcaccaacaatcatgatatatgaacacccaagccataa-tcataaacaacaacatgtctcagcaacaacaacatcaat 19629405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 19983619 - 19983559
Alignment:
Q  64 tttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19983619 tttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 19983559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 1556224 - 1556282
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  1556224 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 1556282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 13620831 - 13620773
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13620831 aaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 13620773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 16232111 - 16232169
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  16232111 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 16232169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 19610237 - 19610295
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  19610237 aaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttca 19610295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22251603 - 22251545
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  22251603 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttca 22251545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 18381972 - 18381855
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctc 193  Q
    |||| |||||||||||||| |||||||||| || ||||||||||||| ||| |||   ||||||  |||||||||| |||||| | |||||||||  ||     
T  18381972 ttcaccaatttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcactt 18381873  T
Q  194 agcaacaacaacatcaat 211  Q
    ||||||||||||||||||    
T  18381872 agcaacaacaacatcaat 18381855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 10488918 - 10488976
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  10488918 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 10488976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16376410 - 16376352
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  16376410 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 16376352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16383734 - 16383676
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  16383734 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 16383676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22225775 - 22225717
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||  |||||||| |||||| |||||||||||||||||||||||||||    
T  22225775 aaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttca 22225717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 23977988 - 23978046
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  23977988 aaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttca 23978046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16556176 - 16556118
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| || |||||| |||||| ||||||||||||| |||||||||||||    
T  16556176 aaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttca 16556118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16632732 - 16632674
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| || |||||| |||||| ||||||||||||| |||||||||||||    
T  16632732 aaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttca 16632674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 19299456 - 19299514
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||| ||| ||||||||| |||||| |||||||||| ||||||||||||||||    
T  19299456 aaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttca 19299514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 25651203 - 25651312
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||| ||||||||| | ||| ||| | ||||||| |||||||||| |||||| | |||||| ||  || ||||||||    
T  25651203 tttcacaaaaccaacaacaacaacttaattctcatcatccaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaa 25651302  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  25651303 caacatcaat 25651312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 16825778 - 16825727
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  16825778 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 16825727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 19854135 - 19854230
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| || ||||||||||| ||||| ||| | ||||||| ||||||| || |||||| | |||||| || ||| ||||||||||||||||||    
T  19854135 caacaacaactcatttctcatcatcaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttagcaacaacaacatcaat 19854230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 22362047 - 22361937
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| | |||||||| || | ||||||||| ||||| |||   ||||||| |||||||||| |||||| | |||||| ||  || |||||||    
T  22362047 attttacaaaactaacaacaacaactcaattctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 22361948  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  22361947 acaacatcaat 22361937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 29605420 - 29605525
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | ||| |||| |||||||||||| | ||||| ||| | |||| || ||||| |||| |||||| | |||||| || ||| ||||||||||||    
T  29605420 acaaaaccaacaagaacaacttatttctcattatcaattcatgatttatgcacacccaaaccatgaatcatcaacaacaatatttcttagcaacaacaac 29605519  T
Q  206 atcaat 211  Q
    ||||||    
T  29605520 atcaat 29605525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 34966833 - 34966942
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||||||| |||||  || | ||| | ||||||| ||||||| || |||||| | |||||| || ||| | ||||||    
T  34966833 tttcacaaaaccaacaacaacaacttatttcacatcacgaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaa 34966932  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  34966933 caacatcaat 34966942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 25175792 - 25175840
Alignment:
Q  14 cacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||| ||||||||| |||||||||  ||||||||||||| |||||||||    
T  25175792 cacagcaagagcacgaatttagcatgaattgttcatcaatccattttca 25175840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 18910917 - 18911091
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18910917 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaac 18911016  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  18911017 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 18911091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 16934306 - 16934154
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||||| ||| | ||||||     
T  16934306 ttcattttggtccttcacatgaacagttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatttatgaat 16934207  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
     ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  16934206 acccaagccataaatcataaacaacaacatgtctcagcaacaacaacatcaat 16934154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 11477474 - 11477371
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  11477474 caaaacaaccaacaacatcttatttttcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcagcagcaacaacat 11477375  T
Q  208 caat 211  Q
    ||||    
T  11477374 caat 11477371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 8269027 - 8268925
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||| |||||||| ||||||||| |||||||||||| |||||    
T  8269027 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacacccaagccat-aatcataaacaacaacatgtctcagcaacaataacat 8268929  T
Q  208 caat 211  Q
    ||||    
T  8268928 caat 8268925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 8276127 - 8276025
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||| |||||||| ||||||||| |||||||||||| |||||    
T  8276127 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacacccaagccat-aatcataaacaacaacatgtctcagcaacaataacat 8276029  T
Q  208 caat 211  Q
    ||||    
T  8276028 caat 8276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 9303385 - 9303280
Alignment:
Q  107 acaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| |||||||||| || |||| |||| ||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||    
T  9303385 acaaaaccaccaacaacaactcattttctcaacaacaatcatggtatatgaacacccaagccataattcatagtcaacaacatatctcagcaacaacaac 9303286  T
Q  206 atcaat 211  Q
    ||||||    
T  9303285 atcaat 9303280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 49232360 - 49232445
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  49232360 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 49232445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 14284933 - 14285036
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    |||||||||||||||||||| | ||| || ||||| | ||| ||||||||| |||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  14284933 caaaacaaccaacaacatctcaattcacaccaacattcatgatatatgaacacccaagtcataaatcataaacaacaacatatctgagcaacaacaacat 14285032  T
Q  208 caat 211  Q
    ||||    
T  14285033 caat 14285036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 18911212 - 18911270
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18911212 aaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 18911270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 1468071 - 1467986
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  1468071 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 1467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12264829 - 12264771
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  12264829 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 12264771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 25058958 - 25059016
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  25058958 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 25059016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 49232655 - 49232713
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  49232655 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 49232713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 17956317 - 17956252
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  17956317 ttcattttggtccttctcatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 17956252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 16821063 - 16821127
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaac 123  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  16821063 ttcactttggtccttcacatgaacacttaattcaacttcaccaatttcacaaaaccaccaacaac 16821127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 18897081 - 18897023
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  18897081 aaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttca 18897023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 22275428 - 22275486
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  22275428 aaaatggcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 22275486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 54651676 - 54651734
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  54651676 aaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttca 54651734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 1467776 - 1467718
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  1467776 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 1467718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15468377 - 15468319
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||| | ||||||||| ||||||||||||||||||| ||||||||||||||    
T  15468377 aaaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaacccattttca 15468319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 44229204 - 44229262
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||||    
T  44229204 aaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaacccattttca 44229262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 12812060 - 12812118
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||| ||| ||||||||| |||||| |||||||||| ||||||||||||||||    
T  12812060 aaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttca 12812118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12902127 - 12902069
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||||||    
T  12902127 aaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttca 12902069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 5228533 - 5228589
Alignment:
Q  5 aaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  5228533 aaataacatcacagcaagagcacgaatttagcaacaa-tgttcatcaacccattttca 5228589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 6228902 - 6228797
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| |||| ||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| || ||| ||||||||||||    
T  6228902 acaaaaccaacaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatttcttagcaacaacaac 6228803  T
Q  206 atcaat 211  Q
    ||||||    
T  6228802 atcaat 6228797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 12952934 - 12953039
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| || ||||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| || ||| ||||||||||||    
T  12952934 acaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaac 12953033  T
Q  206 atcaat 211  Q
    ||||||    
T  12953034 atcaat 12953039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 41270301 - 41270352
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  41270301 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 41270352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 98
Target Start/End: Original strand, 45581397 - 45581436
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttca 98  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  45581397 ttcattttggtccttcacatgaacacttaactcaacttca 45581436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 55316445 - 55316496
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  55316445 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 55316496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 4162475 - 4162377
Alignment:
Q  114 aaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||||||| |||| ||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| |  ||| ||||||||||||||||||    
T  4162475 aaccaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatagttcttagcaacaacaacatcaat 4162377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 28557972 - 28558017
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||    
T  28557972 ttcattttggtccttcacatgaacacttaactcgacttcaccaatt 28558017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 54038606 - 54038569
Alignment:
Q  66 tggtccttcacatgaacacttaactcaacttcatcaat 103  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  54038606 tggtccttcacatgaacacttaactcaacttcaccaat 54038569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 15936654 - 15936614
Alignment:
Q  22 gagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  15936654 gagcacgaatttagtaacaattgttcatcaacccattttca 15936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 12488957 - 12488898
Alignment:
Q  152 tatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||| |||||||||| ||| || |||||||||||  || ||||||||||||||||||    
T  12488957 tatgaacacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaat 12488898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 38811231 - 38811180
Alignment:
Q  160 cccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||||| |||||| |||||||||||  || ||||||||||||||||||    
T  38811231 cccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaat 38811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 41661545 - 41661640
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| ||||||| |||||| ||||| ||| | ||||||| | ||||| || |||||| | |||||| || ||||| ||||||||||||||||    
T  41661545 caacaacaacttatttatcatcatcaattcatgatttatgaacactcaagctatgaatcatcaacaacaatatctctcaacaacaacaacatcaat 41661640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 15615068 - 15615110
Alignment:
Q  20 aagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  15615068 aagagcacaaatctagcatgaattgttcatcaacccattttca 15615110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 34559864 - 34559974
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaa-ttatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| | |||||||| || | ||||||||| ||| ||||| | ||||||| | |||||||| |||||| | |||||| ||  || |||||||    
T  34559864 attttacaaaaccaacaacaacaactcaattctcatcatcaaattatgatttatgaacactcaagccatgaatcatcaacaacaatatcacttagcaaca 34559963  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  34559964 acaacatcaat 34559974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 15938488 - 15938456
Alignment:
Q  30 atttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||||||||||||||||||||||    
T  15938488 atttagtaacaattgttcatcaacccattttca 15938456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 47785016 - 47784920
Alignment:
Q  115 accaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaa 210  Q
    |||||||||| || |||||||| |||||| | |||   ||||||| |||||||||| |||||| | |||||||||  || | |||||||||||||||    
T  47785016 accaacaacaactcatttctcaccaacaaatcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttaacaacaacaacatcaa 47784920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 13721260 - 13721086
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13721260 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaac 13721161  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  13721160 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 13721086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 16873383 - 16873209
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  16873383 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaataacatcttatttctcatcaataattatggtatatgaac 16873284  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||||||  |||||||| |||||||||||||||||||||||||||||| || ||||||||| | |||||||||    
T  16873283 acccaagcctcaaatcatactcaacaacatatctcagcaacaacaacatcgattacatatgatttacatctcatt 16873209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 3431613 - 3431461
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||    
T  3431613 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaac 3431514  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
     ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  3431513 acccaagccataaatcataaacaacaacatgtctcagcaacaacaacatcaat 3431461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 22886298 - 22886402
Alignment:
Q  108 caaaacaaccaacaacatctta-tttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaaca 206  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  22886298 caaaacaaccaacaacatcttaatttctcatcaacaatcatgatatatgaacacccaagtcataaatcataaacaacaacatatctcagcaacaacaaca 22886397  T
Q  207 tcaat 211  Q
    |||||    
T  22886398 tcaat 22886402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 18612379 - 18612481
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| | |||||||| |||||||| ||||||||| ||||||||||||||||||    
T  18612379 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacactcaagccat-aatcataaacaacaacatgtctcagcaacaacaacat 18612477  T
Q  208 caat 211  Q
    ||||    
T  18612478 caat 18612481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 18619284 - 18619386
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| | |||||||| |||||||| ||||||||| ||||||||||||||||||    
T  18619284 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacactcaagccat-aatcataaacaacaacatgtctcagcaacaacaacat 18619382  T
Q  208 caat 211  Q
    ||||    
T  18619383 caat 18619386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 21494732 - 21494629
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    |||||||||||||||||||| | |||||| ||||||| ||| |||||| || ||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  21494732 caaaacaaccaacaacatctcaattctcaccaacaatcatgatatatgcacacccaagttataaatcataaacaacaacatatctcagcaacaacaacat 21494633  T
Q  208 caat 211  Q
    ||||    
T  21494632 caat 21494629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 15319491 - 15319406
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  15319491 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 15319406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 15499860 - 15499775
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  15499860 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 15499775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 22006590 - 22006510
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatca 139  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||    
T  22006590 ttcactttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatca 22006510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 13662597 - 13662512
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||| ||||||||| ||||    
T  13662597 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttagttctcatcatcaat 13662512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 22147411 - 22147513
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| || ||||||| ||| |||  |||| |||| ||||||||||||||||||    
T  22147411 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacacctaagccat-aataatatacaacgacatgtctcagcaacaacaacat 22147509  T
Q  208 caat 211  Q
    ||||    
T  22147510 caat 22147513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 13720965 - 13720907
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13720965 aaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 13720907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 271692 - 271607
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  271692 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 271607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 644228 - 644313
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  644228 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 644313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 829963 - 830048
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  829963 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 830048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22006295 - 22006237
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  22006295 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 22006237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 24717195 - 24717130
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  24717195 ttcattttggtccttcacatgaacacttaactcaacttcaccaattttacaaaaccaccaacaaca 24717130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 22089109 - 22089041
Alignment:
Q  76 catgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  22089109 catgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 22089041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 13662302 - 13662244
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  13662302 aaaatagcatcacagcaagagcacgaatttagcaacaattgtttatcaacccattttca 13662244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 271397 - 271339
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  271397 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 271339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 644523 - 644581
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  644523 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 644581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 830258 - 830316
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  830258 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 830316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 16873088 - 16873030
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  16873088 aaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttca 16873030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 23837156 - 23837273
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctc 193  Q
    |||| |||||||||||||| |||| ||||| || ||||||||||||| ||| |||   ||||||  |||||||||| |||||| | |||||||||  ||     
T  23837156 ttcaccaatttcacaaaaccaccaccaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcactt 23837255  T
Q  194 agcaacaacaacatcaat 211  Q
    ||||||||||||||||||    
T  23837256 agcaacaacaacatcaat 23837273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 16195453 - 16195508
Alignment:
Q  7 atagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||    
T  16195453 atagcatcacagcacgagaacgaatttagcaacaattgttcatcaacccattttca 16195508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15319196 - 15319138
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| |||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  15319196 aaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 15319138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15499565 - 15499507
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| |||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  15499565 aaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 15499507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22088831 - 22088773
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||| ||||||||    
T  22088831 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacacattttca 22088773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 2544909 - 2545016
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctca 194  Q
    |||| |||||||||||||| || |||||||    |||||||| ||||||| ||| ||||| ||| |||||||||| |||||||| ||||||||| | |||    
T  2544909 ttcaccaatttcacaaaaccactaacaacagtccatttctcaacaacaatcatgatatatcaacacccaagccat-aatcataaacaacaacatgtatca 2545007  T
Q  195 gcaacaaca 203  Q
     ||||||||    
T  2545008 acaacaaca 2545016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 38635915 - 38635820
Alignment:
Q  117 caacaacatcttatttctcatcaacaa-ttatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| ||| |||||||||||||| ||||| |  |||||| |||||||||| |||||| | |||||| || ||| | ||||||||||||||||    
T  38635915 caacaacaacttgtttctcatcaacaaattatgattcatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaat 38635820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 26011459 - 26011569
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| | |||||||| |||| ||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| ||  || |||||||    
T  26011459 attttacaaaaccaacaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 26011558  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  26011559 acaacatcaat 26011569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 39115041 - 39115087
Alignment:
Q  59 ttcaatttggtccttcacatgaac-acttaactcaacttcatcaatt 104  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  39115041 ttcattttggtccttcacatgaaccacttaactcaacttcatcaatt 39115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 27233344 - 27233239
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| |||||||||||| | ||| | ||| | ||||||| |||||||||| |||||| | |||||| || ||| | ||||||||||    
T  27233344 acaaaaccaacaacaacaacttatttctcattatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaac 27233245  T
Q  206 atcaat 211  Q
    ||||||    
T  27233244 atcaat 27233239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 21198436 - 21198324
Alignment:
Q  100 caatttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaa 198  Q
    |||||| || |||| |||||||||| || |||||||||| |||| | |||   ||||||| |||||||||| |||||| | || ||||||  || |||||    
T  21198436 caattttaccaaaccaccaacaacaactcatttctcatccacaaatcatgaattatgaacacccaagccatgaatcattaacagcaacatcacttagcaa 21198337  T
Q  199 caacaacatcaat 211  Q
    |||||||||||||    
T  21198336 caacaacatcaat 21198324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 38533628 - 38533724
Alignment:
Q  116 ccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||||||| ||||||||||||| ||| |||   |||| || |||||||||| ||| || |||||||||||  |  ||||||||||||||||||    
T  38533628 ccaacaacatctcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacctagcaacaacaacatcaat 38533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 30120948 - 30120999
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||| ||||||||    
T  30120948 catcacagcaagagcacgaatttagcatgaattgttcatcaactcattttca 30120999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 4233826 - 4233872
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  4233826 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 4233872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 5854579 - 5854689
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| | |||||||| || | ||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| ||  || |||||||    
T  5854579 attttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 5854678  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  5854679 acaacatcaat 5854689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 17502112 - 17502158
Alignment:
Q  59 ttcaatttggtccttcacatgaac-acttaactcaacttcatcaatt 104  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||    
T  17502112 ttcattttggtccttcagatgaaccacttaactcaacttcatcaatt 17502158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 37653891 - 37653788
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| ||||||| |||||| ||| | |||  |||||||| ||||||||||||||||| | |||||| ||  || | ||||||||||    
T  37653891 acaaaaccaacaacaacaacttatttttcatcatcaaatcatg--atatgaacacccaagccataaatcatcaacaacaatattccttaacaacaacaac 37653794  T
Q  206 atcaat 211  Q
    ||||||    
T  37653793 atcaat 37653788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 18041813 - 18041704
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||||||| |||||  || | ||| | ||||||| || |||| || |||||| | |||||| |||||| | ||||||    
T  18041813 tttcacaaaaccaacaacaacaacttatttcacatcataaactcatgatttatgaacacctaagctatgaatcatcaacaacaatatatcttaacaacaa 18041714  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  18041713 caacatcaat 18041704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 18261748 - 18261643
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| |||| ||||||||| ||| | ||| | ||||||| ||||||| || |||||| | |||||| || ||| | ||||||||||    
T  18261748 acaaaaccaacaacaacaacttaattctcatcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaac 18261649  T
Q  206 atcaat 211  Q
    ||||||    
T  18261648 atcaat 18261643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 33611330 - 33611225
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| ||||| |||||||| ||| | ||| | ||||||| | |||||||| |||||| | |||||| ||  || ||||||||||||    
T  33611330 acaaaaccaacaacaacaacttatatctcatcatcaaatcatgatttatgaacacacaagccatgaatcatcaacaacaatatcacttagcaacaacaac 33611231  T
Q  206 atcaat 211  Q
    ||||||    
T  33611230 atcaat 33611225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 5e-80; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 7132397 - 7132223
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7132397 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacacaaccaccaacaacatcttatttctcatcaacaattatggtatatgaac 7132298  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  7132297 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 7132223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 20000647 - 20000821
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  20000647 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaac 20000746  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||||||  |||||||| |||||||||||||||||||||||||||||| || ||||||||| | |||||||||    
T  20000747 acccaagcctcaaatcatactcaacaacatatctcagcaacaacaacatcgattacatatgatttacatctcatt 20000821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 8044913 - 8045017
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaaca 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  8044913 caaaacaaccaacaacatcttatttctcatcaacaattcatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcagcaacaaca 8045012  T
Q  207 tcaat 211  Q
    |||||    
T  8045013 tcaat 8045017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 14996100 - 14996202
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  14996100 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacacccaagccat-aatcataaacaacaacatgtctcagcaacaacaacat 14996198  T
Q  208 caat 211  Q
    ||||    
T  14996199 caat 14996202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 19697655 - 19697553
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  19697655 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacacccaagccat-aatcataaacaacaacatgtctcagcaacaacaacat 19697557  T
Q  208 caat 211  Q
    ||||    
T  19697556 caat 19697553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 19708240 - 19708138
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  19708240 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgaacacccaagccat-aatcataaacaacaacatgtctcagcaacaacaacat 19708142  T
Q  208 caat 211  Q
    ||||    
T  19708141 caat 19708138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 16522783 - 16522893
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || |||| |||| ||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  16522783 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataatcaacaacatatctcagcaaca 16522882  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  16522883 acaacatcaat 16522893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 18168894 - 18168980
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaatt 145  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| |||||    
T  18168894 ttcactttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaatt 18168980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 9295659 - 9295769
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||| ||| |||||||||| || |||| |||| ||||||| ||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  9295659 attttacataaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcattatcaacaacatatctcagcaaca 9295758  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  9295759 acaacatcaat 9295769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 7132102 - 7132044
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7132102 aaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 7132044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 5682860 - 5682795
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5682860 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 5682795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 25119541 - 25119476
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  25119541 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 25119476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8378370 - 8378428
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  8378370 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 8378428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 18169189 - 18169247
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  18169189 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 18169247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 19020705 - 19020763
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  19020705 aaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttca 19020763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 32460960 - 32460880
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacat 188  Q
    |||||||||||||||||||| | |||||| ||||||| ||| |||||| || |||||| |||||||||||| |||||||||    
T  32460960 caaaacaaccaacaacatctcaattctcaccaacaatcatgatatatgcacacccaagtcataaatcataaacaacaacat 32460880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 18248437 - 18248495
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||||||||||||    
T  18248437 aaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttca 18248495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 20000942 - 20001000
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  20000942 aaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttca 20001000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 15044808 - 15044903
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||||  ||||||||||||| ||| | ||| | ||||||| |||||||||| |||||| |||||||||||  || ||||||||||||||||||    
T  15044808 caacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaat 15044903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 15109616 - 15109521
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||||  ||||||||||||| ||| | ||| | ||||||| |||||||||| |||||| |||||||||||  || ||||||||||||||||||    
T  15109616 caacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaat 15109521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15287282 - 15287224
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||||| ||||||||||    
T  15287282 aaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttca 15287224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15294391 - 15294333
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||| | |||||||||||| ||||||||||    
T  15294391 aaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttca 15294333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 47357880 - 47357931
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  47357880 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 47357931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 17145694 - 17145636
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||  |||||||| |||||| || ||||||||||||||| ||||||||    
T  17145694 aaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaactcattttca 17145636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 9795207 - 9795283
Alignment:
Q  129 atttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaaca 206  Q
    |||||||| ||||||| ||| ||||| ||| |||||||||| |||||||| ||||||||| | ||| |||||||||||    
T  9795207 atttctcaacaacaatcatgatatatcaacacccaagccat-aatcataaacaacaacatgtatcaacaacaacaaca 9795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 40905210 - 40905105
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| |||||||||||||| ||| | ||| | ||||||| |||||||||  | |||| | |||||| || ||| ||||||||||||    
T  40905210 acaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccacgagtcatcaacaacaatatctcttagcaacaacaac 40905111  T
Q  206 atcaat 211  Q
    ||||||    
T  40905110 atcaat 40905105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 19020459 - 19020495
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19020459 caaaacaaccaacaacatcttatttctcatcatcaat 19020495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 15213923 - 15213877
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  15213923 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 15213877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 22738488 - 22738546
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||| ||| |||||| || ||||||||| ||| ||||||||||    
T  22738488 aaaatagcatcacagcaagaacacgaatttaacatcaattgttcctcagcccattttca 22738546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 5e-80; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 12636200 - 12636026
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12636200 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatatgaac 12636101  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  12636100 acccaatccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 12636026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 8943770 - 8943944
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8943770 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaacaacatcttatttctcattaacaattatggtatatgaac 8943869  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  8943870 acccaatccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 8943944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 12641974 - 12641800
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  12641974 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaacaacatcttatttctcatcaacacttatggtatatgaac 12641875  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  12641874 acccaagccataaatcatactcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 12641800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 42178301 - 42178127
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  42178301 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaacaattttggtatatgaac 42178202  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  42178201 acccaagccataagtcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 42178127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 3798935 - 3798761
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  3798935 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaac 3798836  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  3798835 acccaagcctcaaatcatactcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 3798761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 28031523 - 28031419
Alignment:
Q  108 caaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaaca 206  Q
    |||||||||||||||||||| |||| |||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  28031523 caaaacaaccaacaacatctcattttctcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcaacaacaacaaca 28031424  T
Q  207 tcaat 211  Q
    |||||    
T  28031423 tcaat 28031419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 15633186 - 15633288
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    |||||||||||||||||||||||||||||  |||||| ||| ||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  15633186 caaaacaaccaacaacatcttatttctcactaacaatcatgatatatgaacacccaagccataaatcat-agcaacaacatatctcagcaacaacaacat 15633284  T
Q  208 caat 211  Q
    ||||    
T  15633285 caat 15633288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 24686108 - 24686028
Alignment:
Q  64 tttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  24686108 tttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 24686028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 12728316 - 12728401
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  12728316 ttcactttggtccttcacctgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 12728401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 25213042 - 25213123
Alignment:
Q  130 tttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||| ||||||| ||| ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25213042 tttctcaacaacaatcatgatatatgaacacccaagccataattcattatcaacaacatatctcagcaacaacaacatcaat 25213123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 34824399 - 34824484
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  34824399 ttcactttggtccttcacatgaacacttaacttaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 34824484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 17204303 - 17204406
Alignment:
Q  109 aaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||| |||| |||| ||||||| ||| |||||||||    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  17204303 aaaacaaccaacaacatctcattttctcaacaacaatcatgatatatgaacatataagccataattcataatcaacaatatatctcagcaacaacaacat 17204402  T
Q  208 caat 211  Q
    ||||    
T  17204403 caat 17204406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 8944065 - 8944123
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8944065 aaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 8944123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 22274645 - 22274731
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaatt 145  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    |||||||| ||||||||    
T  22274645 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatt 22274731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 24827009 - 24826899
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || |||| |||| ||||||| ||| || |||| | |||||||||||| |||||||||||||| |||||||||||||    
T  24827009 attttacaaaaccaccaacaacagctcattttctcaacaacaatcatgataaatgagcacccaagccataattcataatcaacaacgtatctcagcaaca 24826910  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  24826909 acaacatcaat 24826899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 11231670 - 11231585
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  11231670 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 11231585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 145
Target Start/End: Original strand, 22283883 - 22283964
Alignment:
Q  64 tttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaatt 145  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  | |||||||| || |||||    
T  22283883 tttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaattcatttctcaacagcaatt 22283964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 22513517 - 22513432
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  22513517 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 22513432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 28776139 - 28776054
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  28776139 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 28776054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12635905 - 12635847
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  12635905 aaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttca 12635847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 12728611 - 12728669
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  12728611 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 12728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 34824694 - 34824752
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  34824694 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 34824752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 42178006 - 42177948
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42178006 aaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 42177948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 21142114 - 21142172
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  21142114 aaaatagcatcacaacaagagcacgaatttaacatcaattgttcatcaacccattttca 21142172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 23778082 - 23778024
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  23778082 aaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttca 23778024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 211
Target Start/End: Complemental strand, 3509 - 3413
Alignment:
Q  115 accaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||||| || |||||||||| ||||| |||   ||||||| |||||||||| |||||| |||||||||||  || ||||||||||||||||||    
T  3509 accaacaacaactcatttctcatctacaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaat 3413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 3798640 - 3798582
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  3798640 aaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttca 3798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 11231375 - 11231317
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  11231375 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 11231317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12641679 - 12641621
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12641679 aaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttca 12641621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 16935812 - 16935870
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||    
T  16935812 aaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttca 16935870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 17006472 - 17006530
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||    
T  17006472 aaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttca 17006530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 19433614 - 19433504
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || ||||||||||||||| | |||   ||||||| |||||||||| |||||| | |||||| || ||| |||||||    
T  19433614 attttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatctcttagcaaca 19433515  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  19433514 acaacatcaat 19433504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22513222 - 22513164
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  22513222 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 22513164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 24685818 - 24685760
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  24685818 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 24685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 28775844 - 28775786
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  28775844 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 28775786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 22256270 - 22256332
Alignment:
Q  109 aaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatc 174  Q
    |||||||||||||||||||||||||||||   |||||||| ||||| ||| |||||||||||||||    
T  22256270 aaaacaaccaacaacatcttatttctcat---caattatgatatataaacacccaagccataaatc 22256332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 19886687 - 19886636
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  19886687 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 19886636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 7507889 - 7507844
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcat 49  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||    
T  7507889 aaaatagcatcacaacaagagcacgaatttagcaataattattcat 7507844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 25305408 - 25305520
Alignment:
Q  100 caatttcacaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaa 198  Q
    ||||||| |||||| |||||||||| || ||||||||||||| ||| |||   ||||||  |||| ||||| |||||| | |||||||||  || ||| |    
T  25305408 caatttcgcaaaactaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaggccatgaatcatcaacaacaacatcacttagcca 25305507  T
Q  199 caacaacatcaat 211  Q
    |||||||||||||    
T  25305508 caacaacatcaat 25305520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 22775503 - 22775457
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  22775503 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 22775457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 22780881 - 22780835
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  22780881 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 22780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 67958 - 68067
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||||||||||||| | ||| |||   ||||||| | |||||||| |||||  | |||||| ||  || ||||||||    
T  67958 tttcacaaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcacttagcaacaa 68057  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  68058 caacatcaat 68067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 23821886 - 23821777
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||||||| ||||| ||| | |||   ||||||| |||| ||||| |||||| | |||||| ||  || ||||||||    
T  23821886 tttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttagcaacaa 23821787  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  23821786 caacatcaat 23821777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 23830965 - 23830856
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||||||| ||||| ||| | |||   ||||||| |||| ||||| |||||| | |||||| ||  || ||||||||    
T  23830965 tttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttagcaacaa 23830866  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  23830865 caacatcaat 23830856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 15927492 - 15927666
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15927492 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatgtgaac 15927591  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  15927592 acccaagccatagatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 15927666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 14251230 - 14251056
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  14251230 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaacaattatggtatctgaac 14251131  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  14251130 acccaagccataagtcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 14251056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 18980353 - 18980179
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  18980353 ttcaatttggtccttcacatgaatactcaactcaacttcatcaatttcacaaaaccaccaccaacatcttatttctcatcaacaattatgatatatgaac 18980254  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  18980253 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 18980179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 13758294 - 13758468
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  13758294 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaataacatcttatttctcatcaacaattatggtatatgaac 13758393  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  13758394 acccaagcctcaaatcatactcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 13758468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 211
Target Start/End: Original strand, 371012 - 371164
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||    
T  371012 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaac 371111  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
     ||||||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  371112 acccaagccataaatcataaacaacaacatgtctcggcaacaacaacatcaat 371164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 15951119 - 15951038
Alignment:
Q  63 atttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||  ||||||||||||| ||||    
T  15951119 atttggtccttcacatgaacacttaactcaacttcaccaatttcagaaaaccaccaacaacaatttatttctcatcatcaat 15951038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 1937333 - 1937270
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaa 122  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1937333 ttcattttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaacaa 1937270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 7822652 - 7822737
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  7822652 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 7822737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 7829963 - 7830048
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  7829963 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 7830048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 27101969 - 27101884
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  27101969 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 27101884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 27109317 - 27109232
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  27109317 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 27109232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 27176357 - 27176442
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  27176357 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 27176442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 38784061 - 38783976
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  38784061 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 38783976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15950828 - 15950770
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  15950828 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 15950770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 18980058 - 18980000
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  18980058 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 18980000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 14250935 - 14250877
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  14250935 aaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttca 14250877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15760151 - 15760093
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  15760151 aaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttca 15760093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 15927787 - 15927845
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  15927787 aaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttca 15927845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 13377495 - 13377604
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||||||||| ||| | ||| | ||||||| |||||||||| |||||| |||||||||||  || ||||||||    
T  13377495 tttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaa 13377594  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  13377595 caacatcaat 13377604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 7822947 - 7823005
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  7822947 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 7823005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 7830258 - 7830316
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  7830258 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 7830316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 13758589 - 13758647
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  13758589 aaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttca 13758647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 27101674 - 27101616
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  27101674 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 27101616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 27109022 - 27108964
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  27109022 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 27108964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 27176652 - 27176710
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  27176652 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 27176710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 38783766 - 38783708
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  38783766 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 38783708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 17224227 - 17224110
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctc 193  Q
    |||| |||||| ||||||| |||||||||| || ||||||||||||| ||| |||   ||||||  |||||||||| |||||| || ||||||||  ||     
T  17224227 ttcaccaattttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcactt 17224128  T
Q  194 agcaacaacaacatcaat 211  Q
    ||||||||||||||||||    
T  17224127 agcaacaacaacatcaat 17224110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 32494535 - 32494490
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  32494535 ttcattttggtccttcacatgaacacttaactcaacttcaccaatt 32494490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 48622703 - 48622646
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttc 61  Q
    |||||| |||||||  |||||||| ||||||||| |||||||||||||||||||||||    
T  48622703 aaaatatcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttc 48622646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 2437683 - 2437734
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||||| |||||||||| |||||||||| | ||||||||||    
T  2437683 catcacaacaagagcacgaatttagcaagaattgttcattatcccattttca 2437734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 13911050 - 13910999
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||    
T  13911050 catcacaacaagagcacgaatttagcatgaattgttcatcaactcattttca 13910999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 18253862 - 18253822
Alignment:
Q  22 gagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  18253862 gagcacgaatttagtaacaattgttcatcaacccattttca 18253822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 10989635 - 10989686
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  | |||||||||||||||||||||    
T  10989635 catcacagcaagagcacgaatttagcatgatttgttcatcaacccattttca 10989686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 20583821 - 20583726
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| |||||||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| ||  || | ||||||||||||||||    
T  20583821 caacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcccttaacaacaacaacatcaat 20583726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 15358770 - 15358872
Alignment:
Q  110 aaacaaccaacaacatcttatttctcatcaacaattatgg-tatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatc 208  Q
    |||||| |||||||| ||||||| |||||| ||| | | | ||||||||| |||||||||| |||||| | |||||| |  ||| | |||||||||||||    
T  15358770 aaacaaacaacaacaacttatttttcatcatcaaatcttgatatatgaacacccaagccatgaatcatcaacaacaaaacttcttaacaacaacaacatc 15358869  T
Q  209 aat 211  Q
    |||    
T  15358870 aat 15358872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 48356609 - 48356719
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| | |||||||| || | ||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| ||  || |||||||    
T  48356609 attttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 48356708  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  48356709 acaacatcaat 48356719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 13274814 - 13274862
Alignment:
Q  163 aagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||| |||||| |||||||||||  || ||||||||||||||||||    
T  13274814 aagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaat 13274862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 59 - 233
Target Start/End: Complemental strand, 10778302 - 10778128
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10778302 ttcaatttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaccaacatcttatttctcatcaacaattatggtatatgaac 10778203  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  10778202 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 10778128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 23514485 - 23514659
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  23514485 ttcaatttggtccttcacatgaatatttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcatcaataattatggtatatgaac 23514584  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     ||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||||||| | |||||||||    
T  23514585 acccaagccataaatcataatcaacaacatctctcaagaacaacaacatcaattacatatgatttacatctcatt 23514659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 9730715 - 9730563
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||    
T  9730715 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaac 9730616  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
     ||||||||||||||||||| |||||| || ||||||||||||||||||||||    
T  9730615 acccaagccataaatcataaacaacaatatgtctcagcaacaacaacatcaat 9730563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 7528872 - 7528975
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    |||||||||||||||||||| | ||| || ||||||| ||| ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||    
T  7528872 caaaacaaccaacaacatctcaattcacaccaacaatcatgatatatgaacacccaagtcataaatcataaacaacaacatatctcagcaacaacaacat 7528971  T
Q  208 caat 211  Q
    ||||    
T  7528972 caat 7528975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 109123 - 109013
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || |||| |||| ||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  109123 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataatcaacaacatatctcagcaaca 109024  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  109023 acaacatcaat 109013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 16105608 - 16105718
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || |||| |||| ||||||| ||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  16105608 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacctaagccataattcataatcaacaacatatctcagcaaca 16105707  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  16105708 acaacatcaat 16105718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 1219852 - 1219767
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  1219852 ttcactttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 1219767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 22883416 - 22883331
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  22883416 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 22883331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 17909478 - 17909580
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||||| || |||| ||| ||||||||| |||||||||| |||||||| ||||||||| || || || |||||||||    
T  17909478 caaaacaaccaacaacatcttatttctcaccaccaatcatgatatatgaacacccaagccat-aatcataaacaacaacatgtcgcatcagcaacaacat 17909576  T
Q  208 caat 211  Q
    ||||    
T  17909577 caat 17909580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 21932713 - 21932628
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  21932713 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 21932628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 21938883 - 21938798
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  21938883 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 21938798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 35581960 - 35582045
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  35581960 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 35582045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 36990102 - 36990017
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  36990102 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 36990017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 1219557 - 1219499
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  1219557 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 1219499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 10778007 - 10777949
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  10778007 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 10777949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 23514780 - 23514838
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  23514780 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 23514838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 11212102 - 11212044
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  11212102 aaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttca 11212044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 17471625 - 17471567
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  17471625 aaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttca 17471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 22883121 - 22883063
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  22883121 aaaatagcatcacagcaagagcacaaatttaacaacaattgttcaccaacccattttca 22883063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 35791135 - 35791077
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  35791135 aaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 35791077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 7425543 - 7425601
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  7425543 aaaataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttca 7425601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 21932418 - 21932360
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  21932418 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 21932360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 21938588 - 21938530
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  21938588 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 21938530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 35582255 - 35582313
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  35582255 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 35582313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 23493885 - 23493994
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||||||||| ||| | |||   ||||||| |||||||||| |||||| |||||||||||  || ||||||||    
T  23493885 tttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaa 23493984  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  23493985 caacatcaat 23493994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 36989807 - 36989749
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| | ||||||| |||||| ||||||||||||| |||||||||||||    
T  36989807 aaaatagcatcacagctagagcacgaatttaacaacaattgttcaccaacccattttca 36989749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 12600 - 12651
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  12600 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 12651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 25426854 - 25426905
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  25426854 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 25426905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 3673828 - 3673937
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatta-tggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||||||||| ||| |  || | ||||||| |||||||||| |||||| |||||| || |  || ||||||||    
T  3673828 tttcaccaaaccaacaacaacaacttatttctcatcatcaaatcgtgatttatgaacacccaagccatgaatcatcatcaaccacctcgcttagcaacaa 3673927  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  3673928 caacatcaat 3673937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 4200011 - 4199960
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||||| |||||||||  |||| ||||||||| ||||||||    
T  4200011 catcacaacaagagcacgaatttagcatgaattattcatcaactcattttca 4199960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 5451124 - 5451017
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||||||||| ||| | ||| | ||||| |  ||||||||  |||||| |||||||||||  || ||||||||    
T  5451124 tttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgatcatccaagccaagaatcatcatcaacaacatcacttagcaacaa 5451025  T
Q  202 caacatca 209  Q
    ||||||||    
T  5451024 caacatca 5451017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 18778018 - 18777967
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||| ||  |||||||||||||||||||||||    
T  18778018 catcacagcaagagcacgaatttaacatgaattgttcatcaacccattttca 18777967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 19500125 - 19500176
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  || ||||||||||||||||||||    
T  19500125 catcacagcaagagcacgaatttagcatgaagtgttcatcaacccattttca 19500176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 21073621 - 21073570
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||| ||||||||||||    
T  21073621 catcacagcaagagcacgaatttagcatgaattgttcattaacccattttca 21073570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 22366507 - 22366456
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  ||||| |||||||||||||||||    
T  22366507 catcacagcaagagcacgaatttagcatgaattgctcatcaacccattttca 22366456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 23981794 - 23981688
Alignment:
Q  105 tcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaa 204  Q
    ||||||||| |  ||||||| |||||||| |||||  ||| |||   ||||||| |||||||||| |||||| | |||||| ||  || |||||||||||    
T  23981794 tcacaaaaccaataacaacaacttatttcacatcacaaatcatgagttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaa 23981695  T
Q  205 catcaat 211  Q
    |||||||    
T  23981694 catcaat 23981688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 28902140 - 28902186
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  28902140 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 28902186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 28938535 - 28938581
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  28938535 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 28938581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 7728398 - 7728495
Alignment:
Q  115 accaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||||| || || ||||| |||||||| |||   |||| || ||||||| |||||| || |||||||||||  || ||||||||||||||||||    
T  7728398 accaacaacacctcatctctcaccaacaattcatgaattatgcacacccaagcgataaattatcatcaacaacatcacttagcaacaacaacatcaat 7728495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 29917981 - 29918038
Alignment:
Q  152 tatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatca 209  Q
    ||||||| |||||||||| |||||| | |||||| || ||| ||||||||||||||||    
T  29917981 tatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaacatca 29918038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 59 - 233
Target Start/End: Original strand, 17148491 - 17148665
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  17148491 ttcaatttggtccatcacatgaacacttaactcaacttcatcaatttcacaaaaccaccaccaacatcttatttctcatcaacaattatgatatatgaac 17148590  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  17148591 acccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 17148665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 211
Target Start/End: Complemental strand, 21650372 - 21650220
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaac 158  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||||| ||| |||||||||    
T  21650372 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacatcttatttctcacaaacaatcatgatatatgaac 21650273  T
Q  159 ccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
     ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  21650272 acccaagccataaatcataaacaacaacatgtctcaacaacaacaacatcaat 21650220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 18060090 - 18060005
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  18060090 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatttctcatcatcaat 18060005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 46523608 - 46523666
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46523608 aaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 46523666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 17004562 - 17004647
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  17004562 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 17004647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 38055423 - 38055338
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  38055423 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 38055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 44035303 - 44035238
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  44035303 ttcattttggtccttcacatgaacacttaactcaacttcaccaattgcacaaaaccaccaacaaca 44035238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 18059795 - 18059737
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  18059795 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttca 18059737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 17004857 - 17004915
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  17004857 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 17004915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 17148786 - 17148844
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  17148786 aaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttca 17148844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 22228027 - 22228085
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  22228027 aaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttca 22228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 22232724 - 22232782
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  22232724 aaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttca 22232782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 20177133 - 20177250
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctc 193  Q
    |||| |||||||||||||| |||||||||| || ||||||| ||||||| | |||   ||||||   ||||||||| |||||| |||||||||||  ||     
T  20177133 ttcaccaatttcacaaaaccaccaacaacaactcatttctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcactt 20177232  T
Q  194 agcaacaacaacatcaat 211  Q
    ||||||||||||||||||    
T  20177233 agcaacaacaacatcaat 20177250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 19962536 - 19962478
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||| ||| ||||||||| |||||| |||||||||| ||||||||||||||||    
T  19962536 aaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttca 19962478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 5072414 - 5072363
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  5072414 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 5072363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 36356524 - 36356465
Alignment:
Q  152 tatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||| ||||||||||||||||| |||||||||||  || || |||||||||||||||    
T  36356524 tatgaacacccaagccataaatcatcatcaacaacatcacttagaaacaacaacatcaat 36356465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 13377129 - 13377012
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctc 193  Q
    |||| ||||||||||||||  |||||||||  | ||||||||||||||| | |||   ||||||  | |||||||| |||||  |||||||||||  ||     
T  13377129 ttcaccaatttcacaaaaccgccaacaacaattcatttctcatcaacaaatcatgaattatgaatactcaagccatgaatcaacatcaacaacatcactt 13377030  T
Q  194 agcaacaacaacatcaat 211  Q
    ||||||||||||||||||    
T  13377029 agcaacaacaacatcaat 13377012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 41229228 - 41229111
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctc 193  Q
    |||| |||||| || |||| |||||||||| || |||||||||| |||| | |||   ||||||| | |||||||| |||||| | |||||||||  ||     
T  41229228 ttcaccaattttaccaaactaccaacaacaactcatttctcatccacaaatcatgaattatgaacactcaagccatgaatcattaacaacaacatcactt 41229129  T
Q  194 agcaacaacaacatcaat 211  Q
    ||||||||||||||||||    
T  41229128 agcaacaacaacatcaat 41229111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 18601144 - 18601093
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||  |||||||||  |||||||||||||||||||||||    
T  18601144 catcacagcaagagcatgaatttagcatgaattgttcatcaacccattttca 18601093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 98
Target Start/End: Original strand, 21859214 - 21859253
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttca 98  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  21859214 ttcattttggtccttcacatgaacacttaactcatcttca 21859253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 16656587 - 16656633
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  16656587 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 16656633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 38055128 - 38055070
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| |||||||  || ||||| |||||| ||||||||||||| |||||||||||||    
T  38055128 aaaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttca 38055070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 6498 - 6396
Alignment:
Q  109 aaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatc 208  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6498 aaaacaaccaacaacatcttatttctcatcaacaattatgatatatgaacacccaagccataaatcataatcaacaacatatctcagcatcaacaacatc 6399  T
Q  209 aat 211  Q
    |||    
T  6398 aat 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 50131 - 50028
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50131 caaaacaaccaacaacatcttatttttcatcaacaatcatgatatatgaacacccaagccataaatcataaacaacaacatatctcagcaacaacaacat 50032  T
Q  208 caat 211  Q
    ||||    
T  50031 caat 50028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 5865 - 5761
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaaca 206  Q
    ||||||||||||||||||||| |||||||| ||||||| |||  |||||||| |||||| |||||||||||| ||||||||| |||||||||||||||||    
T  5865 acaaaacaaccaacaacatctcatttctcaccaacaatcatgacatatgaacacccaagtcataaatcataaacaacaacatttctcagcaacaacaaca 5766  T
Q  207 tcaat 211  Q
    |||||    
T  5765 tcaat 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 5194 - 5296
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    ||||||||||||||||||||||||||| | ||||||| ||| ||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  5194 caaaacaaccaacaacatcttatttcttaccaacaatcatgatatatgaacacccaagccat-aatcataaacaacaacatgtctcagcaacaacaacat 5292  T
Q  208 caat 211  Q
    ||||    
T  5293 caat 5296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 17673 - 17768
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaaca 203  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||| | ||||||||||||||||||| ||||||| | ||||||||||||||    
T  17673 caaaacaaccaacaacatcttatttctcaccaacaatcatgatatatgagcacccaagccataaatcataaacaacaacttgtctcagcaacaaca 17768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 11730 - 11820
Alignment:
Q  120 caacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    ||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  11730 caacatcttatttctcaccaacaatcatgatatatgaacacccaagccataaatcataa-caacaacatgtctcagcaacaacaacatcaat 11820  T

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Target: scaffold0028 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 130521 - 130631
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttattt-ctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || |||| |||| ||||||| ||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  130521 attttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaagccataattcataatcaacaacatatctcaacaaca 130620  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  130621 acaacatcaat 130631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 62; Significance: 6e-27; HSPs: 4)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 39570 - 39655
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  39570 ttcactttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaaattatttctcatcatcaat 39655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 31233 - 31318
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||||||| | ||||||||  ||||||||||||| ||||    
T  31233 ttcattttggtccttcacatgaacacttaactcaacttcactaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 31318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 39865 - 39923
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  39865 aaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 39923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 31528 - 31586
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  31528 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 31586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 39027 - 39112
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||  ||||||||||||| ||||    
T  39027 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccatcaacaacaatttatttctcatcatcaat 39112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 39322 - 39380
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||||    
T  39322 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttca 39380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 154339 - 154254
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||  ||||||||||||| ||||    
T  154339 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccatcaacaatttatttctcatcatcaat 154254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 154044 - 153986
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  154044 aaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttca 153986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 169938 - 169887
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  169938 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 169887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 36319 - 36370
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||| |||||    
T  36319 catcactacaagagcacgaatttagcatgaattgttcatcaacccagtttca 36370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 29093 - 29171
Alignment:
Q  66 tggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaat 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||| |||||||| ||||    
T  29093 tggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaacaatttatatctcatcatcaat 29171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 29381 - 29439
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||    
T  29381 aaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttca 29439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 31613 - 31548
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  31613 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 31548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 41231 - 41296
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41231 ttcattttggtccttcacatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 41296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 165245 - 165146
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacat 207  Q
    |||||||||||||| |||||| ||||||| ||||||| ||| ||||||||| |||||||||| |||||||   |||||||| ||||||||||||||||||    
T  165245 caaaacaaccaacatcatcttttttctcaccaacaatcatgatatatgaacacccaagccat-aatcata---aacaacatgtctcagcaacaacaacat 165150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 1551 - 1493
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1551 aaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 1732 - 1672
Alignment:
Q  173 tcataatcaacaacatatctcagcaacaacaacatcaatgacatatgatgtccatctcatt 233  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  1732 tcataatcaacaacatatctcagcaacaacaacatcaattacatatgatttacatctcatt 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 3941 - 3999
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  3941 aaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttca 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 6416 - 6351
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6416 ttcattttggtccttctcatgaacacttaactcaacttcaccaatttcacaaaaccaccaacaaca 6351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 162512 - 162447
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  162512 ttcattttggtccttcacatgaacacttaactcaatttcaccaatttcacaaaaccaccaacaaca 162447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 166590 - 166525
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaaca 124  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  166590 ttcattttggtccttcacatgaacacttaactcaatttcaccaatttcacaaaaccaccaacaaca 166525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 34677 - 34597
Alignment:
Q  108 caaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacat 188  Q
    |||||||||||||||||||| | |||||| ||||||| ||| ||||||||| |||||| |||||||||||| |||||||||    
T  34677 caaaacaaccaacaacatctcaattctcaccaacaatcatgttatatgaacacccaagtcataaatcataaacaacaacat 34597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 10778 - 10727
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10778 catcacaacaagagcacgaatttagcaacaattgttcatcaacccattttca 10727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 7493 - 7435
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  7493 aaaatagcatcacaacaagagcacgaatttagtaataattgttcatcaacccattttca 7435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 783 - 721
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatttcacaaaacaaccaacaa 122  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  783 ttcattttggtccttcacatgaacacttaactcaacttcaccaa-ttcacaaaaccaccaacaa 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 5906 - 6015
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||| ||||| ||| | ||||  ||||||| | |||||||| |||||| | |||||| ||  || ||||||||    
T  5906 tttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacactcaagccatgaatcatcaacaacaatatcacttagcaacaa 6005  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  6006 caacatcaat 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 21142 - 21091
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  21142 catcacaacaagagcacgaatttagcaagaattgttcatcaacccattttca 21091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 45248 - 45307
Alignment:
Q  3 caaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||    
T  45248 caaaatagcatcacaacaagggcacgaatttaacaacaattattcatcaacccattttca 45307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 54635 - 54693
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||  ||| |||||| |||||||| ||||||||||||||||||    
T  54635 aaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttca 54693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 1612 - 1554
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||    
T  1612 aaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttca 1554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 10376 - 10318
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  10376 aaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttca 10318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 2611 - 2669
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||    
T  2611 aaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttca 2669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 208
Target Start/End: Original strand, 7137 - 7243
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||| ||||| ||| | ||||  ||||||| |||||||||| |||||| | |||||| ||  || ||||||||    
T  7137 tttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaa 7236  T
Q  202 caacatc 208  Q
    |||||||    
T  7237 caacatc 7243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 5249 - 5191
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||||||||| ||||||||| |||||| ||| |||||||||||||||||||||||    
T  5249 aaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaacccattttca 5191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 2421 - 2530
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtat-atgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||||||||||||| ||| || || || |||||  |||||||||| |||||| | |||||||||  || ||||||||    
T  2421 tttcacaaaaccaacaacaacaacttatttctcatcatcaaataaggaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaa 2520  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  2521 caacatcaat 2530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 15955 - 15910
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  15955 ttcattttggtccttcacatgaacacttaactcaacttcatcaatt 15910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 6514 - 6619
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| |||||||||||||| | ||| ||| | ||||||| || ||||||| |||||| | |||||| || ||| |||||||||| |    
T  6514 acaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacctaagccatgaatcatcaacaacaatatctcttagcaacaacatc 6613  T
Q  206 atcaat 211  Q
    ||||||    
T  6614 atcaat 6619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 3188 - 3239
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  3188 catcacagcaagagcacgaatttagcaagaattgttcatcaacccattttca 3239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 34195 - 34140
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattt 59  Q
    |||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  34195 aaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaacccattt 34140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 107991 - 108085
Alignment:
Q  117 caacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| ||||||||||||||| | | ||| | ||||||| ||||||| || |||||| | |||||| |||||| | ||||||||||||||||    
T  107991 caacaacaacttatttctcatcaaaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatatcttaacaacaacaacatcaat 108085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 54093 - 54151
Alignment:
Q  4 aaaatagcatcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||| |||||||||  |||||||| ||||||||| ||||||||||||||||||||||||    
T  54093 aaaacagcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttca 54151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 10877 - 10922
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  10877 ttcattttggtccttcacatgaacacttaactcaacttcaccaatt 10922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 11074 - 11169
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| |||||||||||||| ||| | ||| | ||||||| || ||||||| |||||||| |||||||||  |  ||||||||||||||||||    
T  11074 caacaacaacttatttctcatcatcaaatcatgatctatgaacacctaagccatgaatcataaacaacaacatcacatagcaacaacaacatcaat 11169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 211
Target Start/End: Complemental strand, 77136 - 77019
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctc 193  Q
    |||| |||||||||||||| |||||||||| || ||||||||||||| ||| |||   ||||||  |||||||||| |||||| |  ||||| ||  ||     
T  77136 ttcaccaatttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcactt 77037  T
Q  194 agcaacaacaacatcaat 211  Q
    ||||||||||||||||||    
T  77036 agcaacaacaacatcaat 77019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 19390 - 19345
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  19390 ttcattttggtccttcacatgaacacttaactcaacttcaccaatt 19345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 40446 - 40491
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  40446 ttcattttggtccttcacatgaacacttaactcaacttcaccaatt 40491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 45929 - 45974
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  45929 ttcattttggtccttcacatgaacacttaacttaacttcaccaatt 45974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 79632 - 79672
Alignment:
Q  64 tttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||||||| ||||||| |||||    
T  79632 tttgatccttcacatgaacacttaacttaacttcaccaatt 79672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 1330 - 1279
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  1330 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttca 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 3639 - 3690
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||||  |||||||| ||||||||| ||||||||||||||||||||||||    
T  3639 catcacagtaagagcactaatttagcatcaattgttcatcaacccattttca 3690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 1213 - 1118
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| |||||||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| ||  || ||||||||||||||||||    
T  1213 caacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatattccttagcaacaacaacatcaat 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 13582 - 13472
Alignment:
Q  95 ttcatcaatttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctca 194  Q
    |||| |||||||||||||| || |||||||    |||||||| ||| ||| ||| ||||| ||| |||||||||||| |||||| ||||||||| | |||    
T  13582 ttcaccaatttcacaaaaccactaacaacaatccatttctcaacaagaatcatgatatatcaacacccaagccataa-tcataaacaacaacatgtatca 13484  T
Q  195 gcaacaacaaca 206  Q
     |||||||||||    
T  13483 acaacaacaaca 13472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 28501 - 28611
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| |||||||||| || |||||||| ||| || | |||   ||||||| |||||||||| |||||| | |||||||||  || |||||||    
T  28501 attttacaaaaccaccaacaacaactcatttctcaccaataaatcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttagcaaca 28600  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  28601 acaacatcaat 28611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 44080 - 43970
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| | |||||||| || ||||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| ||  || |||||||    
T  44080 attttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 43981  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  43980 acaacatcaat 43970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 4529 - 4638
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||| ||||| ||| | ||||  ||||||| |||||||||| |||||| | |||||| ||  || ||||||||    
T  4529 tttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaa 4628  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  4629 caacatcaat 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 9143 - 9252
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||| ||||| ||| | ||||  ||||||| |||||||||| |||||| | |||||| ||  || ||||||||    
T  9143 tttcaccaaaccaacaacaacaacttatttcacatcatcaaatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaa 9242  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  9243 caacatcaat 9252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 2597 - 2488
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    |||||| |||| | |||||||| |||||||||||||| |||   |||   ||||||| |||||||||| |||||| |||||||||||  || || |||||    
T  2597 tttcaccaaaccaacaacaacaacttatttctcatcatcaaaacatgaattatgaacgcccaagccatgaatcatcatcaacaacatcacttaggaacaa 2498  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  2497 caacatcaat 2488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 33429 - 33474
Alignment:
Q  59 ttcaatttggtccttcacatgaacacttaactcaacttcatcaatt 104  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||    
T  33429 ttcattttggtccttcacatgaacacttaacttaacttcaccaatt 33474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 107983 - 108023
Alignment:
Q  22 gagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  107983 gagcacgaatttagtaacaattgttcatcaacccattttca 108023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 12149 - 12106
Alignment:
Q  19 caagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    ||||||||| |||||| || ||||||||||||||||||||||||    
T  12149 caagagcacgaatttaacatcaattgttcatcaacccattttca 12106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 37538 - 37633
Alignment:
Q  117 caacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatcaat 211  Q
    |||||||| || ||||||||||| ||||| ||| | ||||||| ||||||| || |||||| | |||||| || ||| | ||||||||||||||||    
T  37538 caacaacaactcatttctcatcatcaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaat 37633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 31701 - 31650
Alignment:
Q  11 catcacaacaagagcacaaatttagcaacaattgttcatcaacccattttca 62  Q
    |||||| |||||||||| |||||||||  |||||||||||||| ||||||||    
T  31701 catcaccacaagagcacgaatttagcatgaattgttcatcaactcattttca 31650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 390 - 344
Alignment:
Q  59 ttcaatttggtccttcacatgaa-cacttaactcaacttcatcaatt 104  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  390 ttcattttggtccttcacatgaaccacttaactcaacttcaccaatt 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 4578 - 4680
Alignment:
Q  110 aaacaaccaacaacatcttatttctcatcaacaattatgg-tatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaacatc 208  Q
    |||||| |||||||| ||||||| |||||| ||| | | | ||||||||| |||||||||| |||||| | |||||| |  ||| | |||||||||||||    
T  4578 aaacaaacaacaacaacttatttttcatcatcaaatcttgatatatgaacacccaagccatgaatcatcaacaacaaaacttcttaacaacaacaacatc 4677  T
Q  209 aat 211  Q
    |||    
T  4678 aat 4680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 69422 - 69532
Alignment:
Q  102 atttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaaca 200  Q
    |||| ||||||| | |||||||| || | ||||||||| ||| | ||| | ||||||| |||||||||| |||||| | |||||| ||  || |||||||    
T  69422 attttacaaaaccaacaacaacacctcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 69521  T
Q  201 acaacatcaat 211  Q
    |||||||||||    
T  69522 acaacatcaat 69532  T

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Target: scaffold0670 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 7956 - 7847
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaatt-atggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaa 201  Q
    ||||||||||| | |||||||| |||||||| |||||  || | ||| | ||||||| ||||||| || |||||| | |||||| || ||| | ||||||    
T  7956 tttcacaaaaccaacaacaacaacttatttcacatcacaaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaa 7857  T
Q  202 caacatcaat 211  Q
    ||||||||||    
T  7856 caacatcaat 7847  T

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Target: scaffold0253 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 7372 - 7477
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| |||||||||||||| | ||| ||| | |||||   |||||||||| |||||| | |||||| || ||| ||||||| ||||    
T  7372 acaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgagtacccaagccatgaatcattagcaacaatatctcttagcaacaccaac 7471  T
Q  206 atcaat 211  Q
    ||||||    
T  7472 atcaat 7477  T

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Target: scaffold0253; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 16797 - 16902
Alignment:
Q  107 acaaaacaaccaacaacatcttatttctcatcaac-aattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaacaac 205  Q
    ||||||| | |||||||| |||||||||||||| | ||| ||| | |||||   |||||||||| |||||| | |||||| || ||| ||||||| ||||    
T  16797 acaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgagtacccaagccatgaatcattagcaacaatatctcttagcaacaccaac 16896  T
Q  206 atcaat 211  Q
    ||||||    
T  16897 atcaat 16902  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 207
Target Start/End: Complemental strand, 68162 - 68058
Alignment:
Q  103 tttcacaaaacaaccaacaacatcttatttctcatcaacaattatggtatatgaacccccaagccataaatcataatcaacaacatatctcagcaacaac 202  Q
    ||||||||||| | |||||||| |||| ||| |||||  | | ||| | ||||||| ||||||| ||||||||| | ||||||  ||||| | |||||||    
T  68162 tttcacaaaaccaacaacaacaacttacttcacatcacaactcatgatttatgaacacccaagctataaatcatcaacaacaatgtatcttaacaacaac 68063  T
Q  203 aacat 207  Q
    |||||    
T  68062 aacat 68058  T

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