View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_362 (Length: 227)

Name: NF8912A_low_362
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_362
NF8912A_low_362
[»] chr4 (26 HSPs)
chr4 (1-227)||(18603857-18604083)
chr4 (1-227)||(16247714-16247940)
chr4 (1-227)||(18223512-18223737)
chr4 (1-227)||(13514098-13514324)
chr4 (1-227)||(14300020-14300246)
chr4 (1-227)||(12480345-12480571)
chr4 (1-225)||(40476785-40477009)
chr4 (1-227)||(8390157-8390383)
chr4 (1-227)||(16233033-16233259)
chr4 (1-227)||(17091190-17091416)
chr4 (1-227)||(23959492-23959718)
chr4 (1-227)||(8049664-8049890)
chr4 (28-227)||(15143987-15144186)
chr4 (1-161)||(16349846-16350006)
chr4 (13-227)||(15075-15289)
chr4 (13-224)||(16219948-16220159)
chr4 (13-227)||(16241148-16241362)
chr4 (11-227)||(14992681-14992897)
chr4 (1-224)||(14163218-14163441)
chr4 (13-227)||(14700219-14700433)
chr4 (1-104)||(19774957-19775060)
chr4 (11-109)||(15267535-15267633)
chr4 (13-89)||(8795-8871)
chr4 (11-109)||(18260199-18260297)
chr4 (16-223)||(15074122-15074329)
chr4 (78-227)||(29449835-29449984)
[»] chr1 (31 HSPs)
chr1 (1-227)||(17041386-17041612)
chr1 (1-227)||(19110129-19110355)
chr1 (1-224)||(21177130-21177353)
chr1 (1-227)||(21842972-21843198)
chr1 (1-227)||(22435113-22435339)
chr1 (1-227)||(21834062-21834288)
chr1 (1-224)||(24784235-24784454)
chr1 (1-227)||(51329865-51330091)
chr1 (1-227)||(16346967-16347193)
chr1 (1-227)||(16353616-16353842)
chr1 (37-227)||(22832529-22832719)
chr1 (1-227)||(41350042-41350268)
chr1 (1-227)||(22401080-22401306)
chr1 (1-224)||(33387405-33387628)
chr1 (13-227)||(16379869-16380083)
chr1 (67-227)||(22459450-22459610)
chr1 (67-227)||(22469879-22470039)
chr1 (15-224)||(21044527-21044736)
chr1 (13-225)||(20922214-20922426)
chr1 (13-227)||(22117489-22117703)
chr1 (13-225)||(20246993-20247205)
chr1 (1-134)||(20080840-20080973)
chr1 (13-143)||(21752822-21752952)
chr1 (1-224)||(20853133-20853356)
chr1 (13-103)||(22402367-22402457)
chr1 (1-212)||(16670293-16670504)
chr1 (11-227)||(19858078-19858294)
chr1 (26-224)||(21741925-21742123)
chr1 (19-224)||(21738409-21738614)
chr1 (118-227)||(18273678-18273787)
chr1 (171-227)||(21752950-21753006)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-227)||(7080-7306)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-225)||(656-880)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-225)||(12427-12651)
scaffold0109 (1-227)||(41929-42155)
[»] chr8 (35 HSPs)
chr8 (1-227)||(22114146-22114372)
chr8 (1-227)||(17829711-17829937)
chr8 (1-227)||(32603959-32604185)
chr8 (1-227)||(30309885-30310111)
chr8 (1-227)||(22043632-22043858)
chr8 (1-224)||(15537197-15537420)
chr8 (1-227)||(19116211-19116437)
chr8 (1-227)||(18860388-18860614)
chr8 (1-227)||(19480817-19481043)
chr8 (1-227)||(19497126-19497352)
chr8 (1-227)||(20015007-20015233)
chr8 (1-224)||(17670769-17670992)
chr8 (1-227)||(17354639-17354865)
chr8 (1-227)||(21163271-21163497)
chr8 (13-227)||(19981793-19982007)
chr8 (1-227)||(22116919-22117145)
chr8 (1-227)||(22125703-22125929)
chr8 (15-227)||(18880398-18880610)
chr8 (15-226)||(6518198-6518409)
chr8 (13-224)||(22524239-22524450)
chr8 (13-227)||(22420634-22420848)
chr8 (55-225)||(22994546-22994716)
chr8 (28-125)||(21390704-21390801)
chr8 (28-125)||(21780030-21780127)
chr8 (11-224)||(21929252-21929465)
chr8 (16-224)||(21330398-21330606)
chr8 (1-224)||(22003825-22004048)
chr8 (31-224)||(21968858-21969051)
chr8 (13-225)||(21672341-21672553)
chr8 (1-224)||(6606213-6606436)
chr8 (1-224)||(21981698-21981921)
chr8 (169-227)||(21390633-21390691)
chr8 (169-227)||(21779959-21780017)
chr8 (1-105)||(21998303-21998407)
chr8 (142-224)||(22027023-22027105)
[»] scaffold0008 (3 HSPs)
scaffold0008 (1-227)||(626-852)
scaffold0008 (1-227)||(138900-139137)
scaffold0008 (169-227)||(15913-15971)
[»] chr7 (27 HSPs)
chr7 (1-227)||(16725757-16725983)
chr7 (1-227)||(17702771-17702997)
chr7 (1-227)||(9592101-9592327)
chr7 (1-227)||(15157367-15157593)
chr7 (1-227)||(11233523-11233749)
chr7 (1-227)||(11549412-11549638)
chr7 (1-199)||(11984729-11984927)
chr7 (1-227)||(12691235-12691461)
chr7 (1-227)||(13689775-13690001)
chr7 (1-227)||(44787661-44787887)
chr7 (1-226)||(8711339-8711564)
chr7 (1-227)||(14958242-14958468)
chr7 (1-226)||(18586482-18586707)
chr7 (1-225)||(18181476-18181700)
chr7 (1-188)||(14336130-14336317)
chr7 (1-227)||(10874186-10874412)
chr7 (13-222)||(15145235-15145444)
chr7 (13-227)||(11526664-11526878)
chr7 (13-227)||(14043444-14043658)
chr7 (13-227)||(14353474-14353688)
chr7 (82-227)||(12801549-12801694)
chr7 (16-224)||(15114906-15115114)
chr7 (11-227)||(15099009-15099224)
chr7 (80-170)||(48810457-48810547)
chr7 (26-212)||(12711963-12712149)
chr7 (11-65)||(12797952-12798006)
chr7 (19-173)||(14260585-14260739)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-227)||(138463-138689)
scaffold0003 (1-227)||(425076-425302)
[»] chr2 (35 HSPs)
chr2 (1-227)||(22462319-22462545)
chr2 (1-227)||(24873591-24873817)
chr2 (3-227)||(23115897-23116121)
chr2 (1-227)||(21319841-21320067)
chr2 (1-227)||(24704320-24704546)
chr2 (1-224)||(24656499-24656722)
chr2 (1-227)||(16931883-16932109)
chr2 (1-227)||(16984616-16984842)
chr2 (1-227)||(17002376-17002602)
chr2 (1-227)||(24678866-24679092)
chr2 (1-227)||(44382409-44382637)
chr2 (1-227)||(9338958-9339184)
chr2 (1-227)||(9487592-9487818)
chr2 (1-227)||(23028300-23028526)
chr2 (1-218)||(20321359-20321576)
chr2 (1-227)||(10872226-10872452)
chr2 (1-227)||(23104565-23104791)
chr2 (1-227)||(22322183-22322409)
chr2 (1-227)||(24265746-24265972)
chr2 (1-227)||(24713410-24713636)
chr2 (1-227)||(27374645-27374871)
chr2 (1-227)||(23030140-23030366)
chr2 (28-227)||(22741804-22742003)
chr2 (13-227)||(22732612-22732826)
chr2 (97-227)||(41605924-41606054)
chr2 (58-227)||(24816677-24816846)
chr2 (13-227)||(23065766-23065980)
chr2 (13-227)||(23075216-23075430)
chr2 (13-111)||(23039527-23039625)
chr2 (16-212)||(28351269-28351465)
chr2 (11-107)||(23274982-23275078)
chr2 (15-62)||(19716021-19716068)
chr2 (15-62)||(19720584-19720631)
chr2 (76-194)||(20849040-20849158)
chr2 (118-227)||(21902033-21902142)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-227)||(171896-172122)
[»] chr3 (56 HSPs)
chr3 (1-227)||(23414327-23414553)
chr3 (1-227)||(16695531-16695757)
chr3 (1-227)||(12890073-12890299)
chr3 (1-227)||(13249408-13249634)
chr3 (1-227)||(13256054-13256280)
chr3 (1-227)||(15359416-15359640)
chr3 (1-227)||(15585932-15586158)
chr3 (1-227)||(20058594-20058820)
chr3 (1-227)||(48428811-48429037)
chr3 (1-227)||(3689307-3689533)
chr3 (1-227)||(10909574-10909800)
chr3 (1-227)||(14873122-14873348)
chr3 (1-227)||(15712596-15712822)
chr3 (1-227)||(16639137-16639363)
chr3 (1-227)||(43166039-43166265)
chr3 (1-224)||(10008964-10009187)
chr3 (1-212)||(15344800-15345011)
chr3 (1-227)||(5108079-5108305)
chr3 (1-227)||(11861720-11861945)
chr3 (1-227)||(15399059-15399284)
chr3 (1-227)||(26789953-26790179)
chr3 (1-226)||(16753242-16753467)
chr3 (1-227)||(5109949-5110175)
chr3 (1-227)||(5421470-5421696)
chr3 (1-226)||(6597419-6597644)
chr3 (1-226)||(6604099-6604324)
chr3 (1-225)||(53381561-53381785)
chr3 (1-178)||(24186554-24186731)
chr3 (1-172)||(12502311-12502483)
chr3 (12-224)||(14577961-14578173)
chr3 (16-223)||(15458967-15459174)
chr3 (1-224)||(16803487-16803710)
chr3 (13-227)||(17498070-17498284)
chr3 (13-227)||(19728138-19728352)
chr3 (1-227)||(23078547-23078773)
chr3 (1-224)||(15066438-15066658)
chr3 (13-227)||(15263000-15263214)
chr3 (13-227)||(15263812-15264026)
chr3 (13-227)||(12842648-12842862)
chr3 (11-227)||(12508091-12508307)
chr3 (11-224)||(2036441-2036654)
chr3 (11-224)||(2040182-2040395)
chr3 (11-224)||(14040133-14040346)
chr3 (11-227)||(17495037-17495253)
chr3 (79-227)||(13027897-13028045)
chr3 (11-227)||(16824805-16825021)
chr3 (19-224)||(14290061-14290266)
chr3 (1-224)||(10416574-10416797)
chr3 (11-109)||(12181731-12181829)
chr3 (70-221)||(35983627-35983778)
chr3 (11-224)||(18130876-18131089)
chr3 (1-53)||(2245372-2245424)
chr3 (11-53)||(12357227-12357269)
chr3 (178-224)||(24190857-24190903)
chr3 (82-188)||(28757777-28757883)
chr3 (19-227)||(12273137-12273345)
[»] scaffold0451 (1 HSPs)
scaffold0451 (1-224)||(13334-13557)
[»] scaffold0028 (3 HSPs)
scaffold0028 (1-224)||(55778-56001)
scaffold0028 (1-227)||(21754-21980)
scaffold0028 (1-227)||(12226-12452)
[»] scaffold0656 (1 HSPs)
scaffold0656 (31-225)||(114-308)
[»] scaffold0044 (3 HSPs)
scaffold0044 (1-224)||(17937-18160)
scaffold0044 (1-155)||(4198-4352)
scaffold0044 (160-227)||(6928-6995)
[»] scaffold0010 (5 HSPs)
scaffold0010 (1-224)||(15201-15424)
scaffold0010 (47-224)||(22011-22188)
scaffold0010 (13-224)||(5704-5915)
scaffold0010 (1-224)||(180143-180366)
scaffold0010 (11-109)||(38754-38852)
[»] chr5 (40 HSPs)
chr5 (1-227)||(18782794-18783020)
chr5 (1-227)||(23536695-23536921)
chr5 (1-225)||(20804277-20804501)
chr5 (1-225)||(23461584-23461808)
chr5 (1-227)||(14996222-14996448)
chr5 (1-227)||(22351596-22351822)
chr5 (1-227)||(22329370-22329596)
chr5 (1-227)||(27522083-27522309)
chr5 (1-227)||(27681883-27682109)
chr5 (1-227)||(37287979-37288205)
chr5 (1-227)||(41774520-41774746)
chr5 (1-225)||(40712457-40712681)
chr5 (1-227)||(16360179-16360405)
chr5 (1-227)||(22138345-22138571)
chr5 (1-227)||(27614033-27614259)
chr5 (1-227)||(29472556-29472782)
chr5 (1-227)||(34570171-34570397)
chr5 (1-227)||(19773637-19773863)
chr5 (13-227)||(21883469-21883683)
chr5 (1-227)||(27664986-27665212)
chr5 (13-224)||(21331472-21331683)
chr5 (13-227)||(25430112-25430326)
chr5 (13-227)||(23474886-23475100)
chr5 (13-158)||(26735340-26735485)
chr5 (103-211)||(23529056-23529164)
chr5 (11-224)||(16257519-16257732)
chr5 (1-108)||(23526731-23526838)
chr5 (1-224)||(28891425-28891648)
chr5 (11-224)||(22591238-22591451)
chr5 (11-224)||(22594793-22595006)
chr5 (1-224)||(20779575-20779798)
chr5 (1-212)||(28911283-28911494)
chr5 (1-212)||(28926551-28926762)
chr5 (11-173)||(21869812-21869974)
chr5 (11-173)||(21874092-21874254)
chr5 (82-224)||(22465693-22465835)
chr5 (11-224)||(23562652-23562865)
chr5 (1-224)||(20770800-20771023)
chr5 (1-224)||(20825115-20825338)
chr5 (169-227)||(26733974-26734032)
[»] scaffold0177 (2 HSPs)
scaffold0177 (1-224)||(14345-14568)
scaffold0177 (1-66)||(10818-10883)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-227)||(11141-11367)
[»] scaffold2059 (1 HSPs)
scaffold2059 (1-224)||(74-296)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-224)||(49439-49662)
scaffold0007 (13-225)||(162311-162523)
[»] scaffold0412 (1 HSPs)
scaffold0412 (1-225)||(14891-15115)
[»] scaffold0285 (1 HSPs)
scaffold0285 (1-221)||(5775-5994)
[»] scaffold0393 (1 HSPs)
scaffold0393 (1-224)||(208-431)
[»] chr6 (37 HSPs)
chr6 (1-227)||(21765424-21765650)
chr6 (1-224)||(25756056-25756279)
chr6 (10-224)||(27558262-27558476)
chr6 (12-227)||(24292227-24292442)
chr6 (1-227)||(2871248-2871474)
chr6 (1-227)||(28259643-28259869)
chr6 (1-227)||(28286047-28286273)
chr6 (1-227)||(28338392-28338618)
chr6 (1-227)||(29588885-29589111)
chr6 (1-227)||(5835674-5835900)
chr6 (1-227)||(28313239-28313465)
chr6 (1-227)||(16575499-16575725)
chr6 (1-227)||(16619655-16619881)
chr6 (1-227)||(22437481-22437707)
chr6 (1-226)||(27206231-27206456)
chr6 (1-226)||(27242772-27242997)
chr6 (1-179)||(22828880-22829058)
chr6 (13-221)||(18181836-18182044)
chr6 (16-227)||(23082050-23082261)
chr6 (13-227)||(18404379-18404593)
chr6 (13-227)||(19667070-19667284)
chr6 (1-195)||(19868230-19868424)
chr6 (13-227)||(23084268-23084482)
chr6 (1-225)||(25958198-25958422)
chr6 (91-212)||(25116259-25116380)
chr6 (11-224)||(8720151-8720364)
chr6 (1-224)||(20009947-20010170)
chr6 (70-226)||(18326538-18326694)
chr6 (11-109)||(24514985-24515083)
chr6 (11-188)||(19882018-19882195)
chr6 (1-109)||(18660531-18660639)
chr6 (13-109)||(19456647-19456743)
chr6 (13-109)||(19466792-19466888)
chr6 (11-111)||(34642144-34642244)
chr6 (11-109)||(16814262-16814360)
chr6 (82-227)||(21475226-21475371)
chr6 (82-227)||(25771537-25771682)
[»] scaffold1220 (1 HSPs)
scaffold1220 (1-224)||(513-736)
[»] scaffold0403 (2 HSPs)
scaffold0403 (1-224)||(345-568)
scaffold0403 (13-227)||(15700-15914)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-224)||(32656-32879)
scaffold0080 (1-227)||(55414-55641)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-227)||(29875-30101)
scaffold0023 (13-111)||(42870-42968)
scaffold0023 (118-227)||(41312-41421)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-224)||(918-1141)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-224)||(23530-23753)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-167)||(9032-9197)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-227)||(65831-66057)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-224)||(16370-16593)
scaffold0017 (1-224)||(20892-21115)
scaffold0017 (13-218)||(194178-194383)
[»] scaffold0289 (1 HSPs)
scaffold0289 (1-227)||(565-791)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-227)||(121469-121703)
scaffold0034 (11-54)||(1426-1469)
[»] scaffold0789 (1 HSPs)
scaffold0789 (1-196)||(701-896)
[»] scaffold0273 (2 HSPs)
scaffold0273 (13-227)||(820-1034)
scaffold0273 (176-227)||(9376-9427)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-227)||(36121-36347)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-227)||(107078-107304)
scaffold0029 (1-227)||(8991-9217)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-227)||(229153-229379)
[»] scaffold1459 (1 HSPs)
scaffold1459 (1-224)||(396-619)
[»] scaffold0261 (3 HSPs)
scaffold0261 (28-227)||(43-242)
scaffold0261 (11-227)||(11715-11931)
scaffold0261 (11-227)||(19895-20111)
[»] scaffold0081 (2 HSPs)
scaffold0081 (1-227)||(22381-22608)
scaffold0081 (1-227)||(37805-38032)
[»] scaffold0718 (1 HSPs)
scaffold0718 (13-227)||(6303-6517)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-227)||(31064-31290)
[»] scaffold0501 (1 HSPs)
scaffold0501 (10-227)||(628-845)
[»] scaffold0022 (3 HSPs)
scaffold0022 (28-227)||(34073-34272)
scaffold0022 (13-227)||(42421-42635)
scaffold0022 (13-227)||(76141-76355)
[»] scaffold0055 (1 HSPs)
scaffold0055 (1-227)||(23021-23247)
[»] scaffold0052 (1 HSPs)
scaffold0052 (1-227)||(8010-8236)
[»] scaffold0297 (2 HSPs)
scaffold0297 (1-227)||(6958-7184)
scaffold0297 (1-227)||(11725-11951)
[»] scaffold0011 (2 HSPs)
scaffold0011 (54-158)||(36724-36828)
scaffold0011 (13-227)||(22834-23048)
[»] scaffold0114 (1 HSPs)
scaffold0114 (13-227)||(16650-16864)
[»] scaffold0102 (2 HSPs)
scaffold0102 (13-225)||(49648-49860)
scaffold0102 (13-227)||(43486-43700)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-161)||(37275-37435)
[»] scaffold0819 (1 HSPs)
scaffold0819 (1-216)||(880-1095)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-224)||(3641-3855)
[»] scaffold0490 (2 HSPs)
scaffold0490 (13-227)||(680-894)
scaffold0490 (11-224)||(3652-3865)
[»] scaffold0218 (1 HSPs)
scaffold0218 (13-227)||(24027-24241)
[»] scaffold0071 (1 HSPs)
scaffold0071 (16-223)||(3017-3224)
[»] scaffold0358 (1 HSPs)
scaffold0358 (13-227)||(9736-9950)
[»] scaffold0075 (2 HSPs)
scaffold0075 (13-227)||(54773-54987)
scaffold0075 (13-89)||(48518-48594)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-157)||(28302-28458)
[»] scaffold0540 (1 HSPs)
scaffold0540 (13-227)||(10181-10395)
[»] scaffold0120 (2 HSPs)
scaffold0120 (13-227)||(14873-15087)
scaffold0120 (13-227)||(12052-12266)
[»] scaffold0278 (1 HSPs)
scaffold0278 (13-227)||(4340-4554)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-227)||(30300-30514)
[»] scaffold0293 (2 HSPs)
scaffold0293 (13-224)||(16199-16410)
scaffold0293 (84-225)||(9190-9331)
[»] scaffold0411 (1 HSPs)
scaffold0411 (13-227)||(9200-9414)
[»] scaffold0342 (1 HSPs)
scaffold0342 (13-227)||(13566-13780)
[»] scaffold0084 (1 HSPs)
scaffold0084 (13-227)||(9012-9226)
[»] scaffold0447 (1 HSPs)
scaffold0447 (15-227)||(1314-1526)
[»] scaffold0383 (1 HSPs)
scaffold0383 (15-227)||(4178-4390)
[»] scaffold0357 (1 HSPs)
scaffold0357 (13-225)||(17280-17492)
[»] scaffold0046 (2 HSPs)
scaffold0046 (13-225)||(718-930)
scaffold0046 (11-224)||(70895-71108)
[»] scaffold0282 (2 HSPs)
scaffold0282 (13-224)||(12902-13113)
scaffold0282 (13-225)||(9426-9637)
[»] scaffold0006 (1 HSPs)
scaffold0006 (56-227)||(105027-105198)
[»] scaffold1274 (1 HSPs)
scaffold1274 (13-227)||(406-620)
[»] scaffold0423 (1 HSPs)
scaffold0423 (13-227)||(933-1147)
[»] scaffold0122 (1 HSPs)
scaffold0122 (13-227)||(39898-40112)
[»] scaffold0077 (1 HSPs)
scaffold0077 (13-227)||(56956-57170)
[»] scaffold0621 (2 HSPs)
scaffold0621 (13-227)||(806-1020)
scaffold0621 (13-227)||(5223-5437)
[»] scaffold0395 (1 HSPs)
scaffold0395 (13-227)||(15824-16038)
[»] scaffold0018 (1 HSPs)
scaffold0018 (58-227)||(8651-8820)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-227)||(3848-4082)
[»] scaffold0074 (1 HSPs)
scaffold0074 (15-227)||(6902-7114)
[»] scaffold0413 (1 HSPs)
scaffold0413 (13-227)||(4331-4545)
[»] scaffold0270 (2 HSPs)
scaffold0270 (13-149)||(7662-7798)
scaffold0270 (13-149)||(14792-14928)
[»] scaffold0001 (2 HSPs)
scaffold0001 (15-227)||(442443-442655)
scaffold0001 (16-218)||(167494-167696)
[»] scaffold1032 (1 HSPs)
scaffold1032 (11-224)||(119-332)
[»] scaffold0331 (1 HSPs)
scaffold0331 (16-227)||(14304-14515)
[»] scaffold0067 (1 HSPs)
scaffold0067 (11-227)||(30411-30627)
[»] scaffold0040 (2 HSPs)
scaffold0040 (13-209)||(18634-18830)
scaffold0040 (19-111)||(110324-110416)
[»] scaffold0476 (1 HSPs)
scaffold0476 (13-227)||(11555-11769)
[»] scaffold0012 (1 HSPs)
scaffold0012 (13-111)||(215837-215935)
[»] scaffold0054 (1 HSPs)
scaffold0054 (19-188)||(62879-63048)
[»] scaffold0053 (1 HSPs)
scaffold0053 (19-224)||(62076-62281)
[»] scaffold0161 (1 HSPs)
scaffold0161 (78-225)||(36637-36784)
[»] scaffold0575 (1 HSPs)
scaffold0575 (13-155)||(10408-10550)
[»] scaffold0848 (1 HSPs)
scaffold0848 (11-224)||(4315-4528)
[»] scaffold0004 (1 HSPs)
scaffold0004 (11-224)||(320030-320243)
[»] scaffold0230 (1 HSPs)
scaffold0230 (70-226)||(17661-17817)
[»] scaffold0058 (1 HSPs)
scaffold0058 (12-224)||(16209-16421)
[»] scaffold0324 (1 HSPs)
scaffold0324 (148-227)||(2636-2715)
[»] scaffold1061 (1 HSPs)
scaffold1061 (19-109)||(270-360)
[»] scaffold0056 (1 HSPs)
scaffold0056 (11-217)||(194-400)
[»] scaffold0434 (1 HSPs)
scaffold0434 (11-227)||(5203-5419)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-224)||(32676-32899)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-224)||(52727-52882)
[»] scaffold2062 (1 HSPs)
scaffold2062 (11-109)||(291-389)
[»] scaffold1600 (1 HSPs)
scaffold1600 (78-227)||(911-1060)
[»] scaffold0523 (1 HSPs)
scaffold0523 (19-224)||(6232-6437)
[»] scaffold0192 (1 HSPs)
scaffold0192 (11-224)||(30313-30526)
[»] scaffold0751 (1 HSPs)
scaffold0751 (19-223)||(5975-6179)
[»] scaffold0671 (1 HSPs)
scaffold0671 (1-111)||(3726-3836)
[»] scaffold0429 (1 HSPs)
scaffold0429 (1-227)||(723-949)
[»] scaffold0031 (1 HSPs)
scaffold0031 (11-109)||(116411-116509)
[»] scaffold0609 (1 HSPs)
scaffold0609 (118-227)||(8451-8560)
[»] scaffold0148 (1 HSPs)
scaffold0148 (82-215)||(6929-7062)
[»] scaffold0169 (1 HSPs)
scaffold0169 (151-227)||(35516-35592)
[»] scaffold0443 (1 HSPs)
scaffold0443 (76-227)||(12256-12407)
[»] scaffold0420 (1 HSPs)
scaffold0420 (148-227)||(7453-7532)
[»] scaffold0335 (1 HSPs)
scaffold0335 (16-95)||(3737-3816)
[»] scaffold0098 (1 HSPs)
scaffold0098 (121-224)||(26357-26460)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-50)||(21773-21822)
[»] scaffold0165 (1 HSPs)
scaffold0165 (119-224)||(16832-16937)
[»] scaffold1336 (1 HSPs)
scaffold1336 (76-212)||(1884-2020)
[»] scaffold0529 (1 HSPs)
scaffold0529 (13-109)||(5877-5973)
[»] scaffold0505 (1 HSPs)
scaffold0505 (79-227)||(2605-2753)
[»] scaffold0235 (2 HSPs)
scaffold0235 (11-47)||(7943-7979)
scaffold0235 (11-47)||(18157-18193)


Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18604083 - 18603857
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18604083 aagtatcttctcatgaactctctcctgaacacagcccaagtcaccacagctccttcttgctcaagggtaggttgaagactaacccaccaatcatcagctt 18603984  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  18603983 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaatatcctctcaatctccttaagccacgtctgggctcc 18603884  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  18603883 atcagggtcatatcttcctttgaaagt 18603857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16247940 - 16247714
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |    
T  16247940 aagtatcttcttaggaactctctcctgaacacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagcct 16247841  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
     |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  16247840 tctcagctagctgatgagtaccaaatcgtactttctggacctcagtgcactgcatcacacggaaaatcctctcaatctctttaagccacgtctgggctcc 16247741  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||||    
T  16247740 atcggggtcatatcttcctttgaaagt 16247714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18223737 - 18223512
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  18223737 aagtatcttctcaggaactctctcctgaacacagcctaagtcac-acagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagctt 18223639  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||| || ||||| |||||||||||    
T  18223638 cctcagctagctgatgagtaccaaatcgtactttctggacctcggtgcactgcatcacacggaaaatcctctaaatctcttttagccacgtctgggctcc 18223539  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||| ||||||    
T  18223538 atcggggtcatatcttccttcgaaagt 18223512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13514098 - 13514324
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  ||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||    
T  13514098 aagtatcttctcaggaactctctcctgaacacagcccaagtcacatcagctccatcttgttcaaggttaggtagcagactaacccaccaatcatcagctt 13514197  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| || || ||||| |||| |||||||| ||| ||||||||||||||||| ||||| |||||||| |||||||||||    
T  13514198 cctcagctagctgatgagtaccaaaacgaactttctgaacctaagtgcactacataacacggaaaatcctctcaatctctttaagccacgtctgggctcc 13514297  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||||    
T  13514298 atcggggtcatatcttcctttgaaagt 13514324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 14300246 - 14300020
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  14300246 aagtatctcctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 14300147  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  14300146 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 14300047  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  14300046 atcagggtcataacgtcctttgaaagt 14300020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 12480345 - 12480571
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  12480345 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 12480444  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  12480445 cctcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 12480544  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  12480545 atcagggtcataacgtcctttgaaagt 12480571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 40476785 - 40477009
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  40476785 aagtatcttctcaggaactctctcctgaacacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 40476884  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || |||||||||||||| || ||||||||||| |||||||||||    
T  40476885 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaaaatcctctcaatttccttaagccacgtctgggctcc 40476984  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| |||||||| | ||||||||||    
T  40476985 atcagggtcataacgtcctttgaaa 40477009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 8390157 - 8390383
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  8390157 aagtatcttctcaggaactctctcctgaacacagcccaagtcacgacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 8390256  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  8390257 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 8390356  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  8390357 atcagggtcataacgtcctttgaaagt 8390383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16233259 - 16233033
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  16233259 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 16233160  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||||||||||||||| || |||||| |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16233159 cctcggccagctgatgagtaccaaatcgcactttctggtcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 16233060  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||| | | ||||||||||||    
T  16233059 atcagggtcacaacgtcctttgaaagt 16233033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17091416 - 17091190
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  17091416 aagtatcttctcaggaactctctcctgaacacagcccaagtcacgacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 17091317  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  17091316 catcggccagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 17091217  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  17091216 atcagggtcataacgtcctttgaaagt 17091190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 23959492 - 23959718
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  23959492 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 23959591  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| || ||||||||||| |||||||||||    
T  23959592 cctcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataacccggaaaatcctctcaatttccttaagccacgtctgggctcc 23959691  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | |||| |||||||    
T  23959692 atcagggtcataacgtcctctgaaagt 23959718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 8049890 - 8049664
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| ||||||||||||||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  8049890 aagtatcttctcatgaactctctcttgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 8049791  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  | |||||||||||||| || ||||| |||||||| |||||||||||||| |||||||||||    
T  8049790 cctcggccagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacccggaatatcctctcaatctccttaagccacgtctgggctcc 8049691  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  8049690 atcagggtcataacgtcctttgaaagt 8049664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 15144186 - 15143987
Alignment:
Q  28 aacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatc 127  Q
    |||||||||||||| |||||||| || |||||||| |  |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||| |    
T  15144186 aacacagcccaagtaaccacagcaccgtcttgctccaaagtaggtagaagactaatccaccaatcatcagcttcctcagccagctgatgtgtaccaaaac 15144087  T
Q  128 gtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||||| || || ||||||||||||||||||||||  ||||| | |||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  15144086 gcaccttctgtacttcggtgcactgcatcacacggaaaactctctcaacctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagt 15143987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16350006 - 16349846
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||||||||||||||||||  |||| || |||| ||| ||| |||||||||| ||||||||||||||||| ||||    
T  16350006 aagtatcttctcaagaactctctcctgaacacagcccaagtcacagcagcaccatctttctctaggttaggtagaaggctaacccaccaatcatcggctt 16349907  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacg 161  Q
    ||||||| |||||||| ||||||||||| || ||||| |||||||||||||||||||||||    
T  16349906 cctcagccagctgatgtgtaccaaatcgcactttctgaacctcagtgcactgcatcacacg 16349846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 15289 - 15075
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |||||| | || |||||||| | ||||||||||||||| |||||||| |||||||||||||||||||||     
T  15289 aggaactctctcctaaacacagcccaagtaaccacaacaccatcttgctctaaggtaggtagaagactcacccaccagtcatcagcttcctcagctagca 15190  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||  ||||||| |||||||| || || || |  ||||| |||||||| ||||| ||||| |||||||| ||||||||    
T  15189 tatgcgttccaaaacgcaccttctgaccctcagtacactgcataactcgaaacactctctcaatctccttgagccacgtctgagctccatcagggtcata 15090  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  15089 tcttcccttgaaagt 15075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 16219948 - 16220159
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | ||||| |||||||| || || || |  |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||      
T  16219948 aggaactctctcctaaacactgcccaagtaacaaccgcgctatcttgctctagggtaggtagaagactcacccaccaatcatcagcttcctcggctagga 16220047  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| |||||||| || |||||||| ||||||||||| ||||||||||| || |  ||||| ||||| |  ||||| ||||| |||||||| ||||||||    
T  16220048 tatgcgtaccaaaacgcaccttctgaacctcagtgcattgcatcacacgaaacactctctcaatctcttcgagccacgtctgagctccatcagggtcata 16220147  T
Q  213 tcttcctttgaa 224  Q
    ||||||||||||    
T  16220148 tcttcctttgaa 16220159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 16241362 - 16241148
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||| || |||||||  || |||||||| |  |||||||||||||| |||||||||||||||||||||||||||| |     
T  16241362 aggaactccctcctaaacacagcccaggtaaccacagaaccatcttgctctaaagtaggtagaagactcacccaccaatcatcagcttcctcagctaaca 16241263  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     |||  | ||||| || ||||||||||| |||   ||||||||||  ||||||| |||||| ||||| || |||||  ||||||||||||| ||||||||    
T  16241262 tatgcattccaaaacgcaccttctggacttcataacactgcatcatgcggaaaaccctctcaatctctttgagccacatctgggctccatcagggtcata 16241163  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  16241162 tcttcccttgaaagt 16241148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 14992897 - 14992681
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || || || |||||    |||| |||||| |||||||| ||||||||||| |||||||     
T  14992897 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcctgttcaagcacgggtaaaagacttacccaccagtcatcagcttcttcagctaa 14992798  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| |||||| |||| ||||| || | |||||||||||| | |||||| |||||  |||| ||||| || ||||||    
T  14992797 catgtgcgtaccaaaccgcaccttctgtacctcactgcattgcatgactctgaaaatcctctcaacctccttgagccacttctgagctccgtcagggtca 14992698  T
Q  211 tatcttcctttgaaagt 227  Q
    || || ||||| |||||    
T  14992697 tacctccctttaaaagt 14992681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14163218 - 14163441
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| | || || ||||| || || ||||| || ||||| || |||  |||||||||||| | |||||||||||| ||||    
T  14163218 aagtatctgcttaggaactctctcctaaatacggcccatgtaacaacagcaccatcttgttctaggacaggtagaagactgatccaccaatcatccgctt 14163317  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||  ||| || ||||| || ||| ||||| ||||||| |||| ||| || || || | ||| || ||||| || ||||| ||||| |||||    
T  14163318 cctcagctagcatatgcgttccaaaacgcaccctctggtcctcagtacactacataactcgaaacaccctttcgatctctttgagccacgtctgagctcc 14163417  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| |||||||||||||| |||||    
T  14163418 atcagggtcatatcttcccttgaa 14163441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 14700219 - 14700433
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||| |||||| | |||||| ||||||| || ||  | || |||||||| | | ||||||||| ||| ||||| |||||||||||||| |||||| ||     
T  14700219 aggaattctctcctaaacacaacccaagtaacaactacaccatcttgctctacgataggtagaatactcacccatcaatcatcagcttcttcagctcgca 14700318  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| || |||||||| ||||| || |||||||  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  14700319 tgtgtgtaccaaaacgcaccttctgtacttcagtgcattgcataacccggaaaactctctcaatctctttgagccacgtctgagctccatcagggtcata 14700418  T
Q  213 tcttcctttgaaagt 227  Q
    |||| |||| |||||    
T  14700419 tcttactttaaaagt 14700433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19775060 - 19774957
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | || |||||||||||||| || ||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  19775060 aagtatcttctcaggaactctctcctaaaaacagcccaagtcacaaccgctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 19774961  T
Q  101 cctc 104  Q
    ||||    
T  19774960 cctc 19774957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 15267535 - 15267633
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| || ||| ||||||||||||||||||||||||| || || || |||||   |||||  ||||| |||||||| |||||||||||||||||||    
T  15267535 tcaggaattccctcctgaacacagcccaagtcaccacagcaccatcctgttcaagcacaggtaacagacttacccaccagtcatcagcttcctcagcta 15267633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 8795 - 8871
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccacca 89  Q
    |||||||||||| | |||| ||||||||| |||||||| || |||||||| | ||||||||||||||| ||||||||    
T  8795 aggaactctctcctaaacagagcccaagtaaccacagcaccatcttgctctaaggtaggtagaagactcacccacca 8871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 18260199 - 18260297
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || || ||||||||   |||||  ||||| |||||||| |||||| |||| |||||||    
T  18260199 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcctgctcaagcacaggtaacagacttacccaccagtcatcaacttcttcagcta 18260297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 15074122 - 15074329
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    |||||||||| |||||||||||| |||||  |||| || ||||| || ||  | |||| |||||| |||||||| ||||| || || || || | |  ||    
T  15074122 aactctctctagaacacagcccaggtcacagcagcaccatcttgttctagaatgggtaaaagactcacccaccagtcatctgcctcttcggccaacatat 15074221  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
    | |||||||| || ||||| || |||||  | |||| |||||| | ||| |  ||||| | |||||| |||||  ||||||||||||| |||||||| ||    
T  15074222 gcgtaccaaaccgcaccttatgtacctcgctacactacatcaccctgaagactctctcaacctccttgagccacttctgggctccatcagggtcatacct 15074321  T
Q  216 tcctttga 223  Q
     |||||||    
T  15074322 ccctttga 15074329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 227
Target Start/End: Complemental strand, 29449984 - 29449835
Alignment:
Q  78 actaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatc 177  Q
    ||||| ||||||||||||||| || |||||||||   || || ||||| || ||||| || |||||||  |||| ||| || | ||| ||||| || |||    
T  29449984 actaatccaccaatcatcagcctcttcagctagcatgtgcgtcccaaaccgcaccttttgaacctcagaacactacatgaccctgaatatcctttcaatc 29449885  T
Q  178 tccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||| |||||| |||| || ||||| || ||||| || || ||||||||    
T  29449884 tccttcagccatttctgagcaccatcaggatcatacctacccttgaaagt 29449835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17041612 - 17041386
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17041612 aagtatcttctcaggaactctctcctgaacacagcccaagtcaccacagctccttcttgctcaagggtaggttgaagactaacccaccaatcatcagctt 17041513  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||    
T  17041512 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcataacacggaatatcctctcaatctccttaagccacgtctgggctcc 17041413  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  17041412 atcagggtcatatcttcctttgaaagt 17041386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19110129 - 19110355
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  19110129 aagtatcttctcaggaactctctcctgaacacaacccaagtcaccacagctccttcttgctcaagggtaggttgaaggctaacccaccaatcatcagctt 19110228  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||||||||| || |||||  | |||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||    
T  19110229 cctcagctagctgatgagtaccaaatcgcactttctgttcttcagtgcactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctcc 19110328  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  19110329 atcagggtcatatcttcctttgaaagt 19110355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21177130 - 21177353
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||| ||||||||| | |||||||||||||||||  || | ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  21177130 aagtatcttctcagcaactctctccttaacacagcccaagtcacagcaacaccttcttgctctagggtaggtagaaggctaacccaccaatcatcagctt 21177229  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  21177230 cctcagctagctgatgcgtaccaaatcgcactttctgaacctcagtgcacttcatcacacggaaaatcctctcgatctccttaagccacgtctgggctcc 21177329  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  21177330 atcagggtcatatcttcctttgaa 21177353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 21842972 - 21843198
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  21842972 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcttgtccaagggtaggtagaagaccaacccaccagtcatcagctt 21843071  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  21843072 cctcagctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 21843171  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  21843172 atcagggtcataacgtcctttgaaagt 21843198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22435339 - 22435113
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| ||||||| |||||||||||  |||| || |||||||| ||| ||||| |||||||||||||||||||||||||||    
T  22435339 aagtatcttcttaggaactctctcctgaacacggcccaagtcacagcagcaccatcttgctctaggttaggtcgaagactaacccaccaatcatcagctt 22435240  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||| ||| |||||||| |||||||| || || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  22435239 ccttagccagctgatgtgtaccaaaacgcactttctgaacctcagtgcactgcatcacacggaaaatcctctcgatctccttaagccacgtctgggctcc 22435140  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  22435139 atcggggtcatatcttcccttgaaagt 22435113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 21834062 - 21834288
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  21834062 aagtatcttctcaggaactctctcctgaacacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 21834161  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  21834162 cctcggctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 21834261  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  21834262 atcagggtcataacgtcctttgaaagt 21834288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 24784454 - 24784235
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||    |  ||||||| |||||||||||| ||||| | || ||||||||| | ||||||||||    
T  24784454 aagtatcttctcaggaactctctcctgaacacagcccaa----cagcagctccatcttgctcaaggttaggttggaggctaacccactagtcatcagctt 24784359  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||||    
T  24784358 cctcagctagctgatgtgtaccgaatcgcaccttctgaacctcagtgcactgcatcacacggaagatcctctcaatctccttaagccacgcctgggctcc 24784259  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  24784258 atctgggtcatatcttcctttgaa 24784235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 51330091 - 51329865
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  51330091 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 51329992  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  51329991 cctcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 51329892  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  51329891 atcagggtcataacgtcctttgaaagt 51329865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16347193 - 16346967
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| || |||||||    
T  16347193 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcgtcagctt 16347094  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16347093 cttcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctccatctccttaagccacgtctgggctcc 16346994  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  16346993 atcagggtcataacgtcctttgaaagt 16346967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16353842 - 16353616
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| || |||||||    
T  16353842 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcgtcagctt 16353743  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16353742 cttcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctccatctccttaagccacgtctgggctcc 16353643  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  16353642 atcagggtcataacgtcctttgaaagt 16353616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 37 - 227
Target Start/End: Complemental strand, 22832719 - 22832529
Alignment:
Q  37 caagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttct 136  Q
    ||||||||  |||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||    
T  22832719 caagtcacagcagcaccatcttgctctagggtaggtagaagactaacccaccagtcatcagcttcctcagctagctgatgtgcaccaaatcgcaccttct 22832620  T
Q  137 ggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
      |||||| |||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  22832619 aaacctcaatgcactgcatcacacggaaaattctctcgatctccttaagccacgtctgggctccatcgaggtcatatcttcccttgaaagt 22832529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 41350268 - 41350042
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  |||||||||||| |||||||    
T  41350268 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccaatcgtcagctt 41350169  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||| ||||||||| || || |||||  |||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  41350168 cctcggccagctgattagtaccaaaccgaactttctgatcctccgtgcactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctcc 41350069  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  41350068 atcagggtcataacgtcctttgaaagt 41350042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22401080 - 22401306
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | |||| |||||| ||||| ||||| ||||||||| |||||||||||||||| | ||||||||| ||||| ||||    
T  22401080 aagtatcttctcaggaactctctcctaaacaaagcccaggtcacaacagccccttcttgcccaagggtaggtagaaggccaacccaccagtcatcggctt 22401179  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||| || || || || ||  | |||||||||| ||| ||||||||||||||| | ||||| |||||||| |||||||||||    
T  22401180 cctcagctagctgatgagtaccgaaccgcactttttgatcttcagtgcactacataacacggaaaatcctcccaatctctttaagccacgtctgggctcc 22401279  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  22401280 atcagggtcatatcttcctttgaaagt 22401306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 33387628 - 33387405
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  33387628 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 33387529  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||  || |||||||||||||| |||||||||||||| || ||||||||    
T  33387528 cctcggccagctgatgagtaccaaaacgcactttctgatcctccgtgcactgcacaacccggaaaatcctctcaatctccttaagccacgtttgggctcc 33387429  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| |||||||| | |||||||||    
T  33387428 atcagggtcataacgtcctttgaa 33387405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 16379869 - 16380083
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || || || || |||||||| | ||||||||| ||||| ||||||||||||||| | ||||||||||||     
T  16379869 aggaactctctcctaaacacagcccaagtaacaactgcaccatcttgctctaaggtaggtagtagactcacccaccaatcatcaacctcctcagctagca 16379968  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| ||||||||||| |||||||| ||||||||||| ||||||||||| ||||  ||||| ||||| |||||||| ||||| |||||||| ||||||||    
T  16379969 tatgcgtaccaaatcgcaccttctgaacctcagtgcattgcatcacacgaaaaactctctcaatctctttaagccacgtctgagctccatcagggtcata 16380068  T
Q  213 tcttcctttgaaagt 227  Q
     || |||||||||||    
T  16380069 cctccctttgaaagt 16380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 22459610 - 22459450
Alignment:
Q  67 gtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaa 166  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||| || |||||||| || || ||||||||||||||| ||||||    
T  22459610 gtaggtagaagactaatccaccaatcatcagcttcctcagtcagctgatgtgtaccaaaacgcaccttctgaacttcggtgcactgcatcacatggaaaa 22459511  T
Q  167 tcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
      ||||| ||||| |||||||| |||||||||||||| ||||||||||| || ||||||||    
T  22459510 ctctctcaatctctttaagccacgtctgggctccatcagggtcatatctccccttgaaagt 22459450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 22470039 - 22469879
Alignment:
Q  67 gtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaa 166  Q
    |||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||| || |||||||| || || ||||||||||||||| ||||||    
T  22470039 gtaggtagaagactaatccaccaatcatcagcttcctcagtcagctgatgtgtaccaaaacgcaccttctgaacttcggtgcactgcatcacatggaaaa 22469940  T
Q  167 tcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
      ||||| ||||| |||||||| |||||||||||||| ||||||||||| || ||||||||    
T  22469939 ctctctcaatctctttaagccacgtctgggctccatcagggtcatatctccccttgaaagt 22469879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 21044736 - 21044527
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctga 114  Q
    |||||||||| | |||||| ||||||| || || || || |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||       
T  21044736 gaactctctcctaaacacaacccaagtaacaactgcaccatcttgctctagggtaggtagaagactcacacaccaatcatcagcttcctcagctagcatg 21044637  T
Q  115 tgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatc 214  Q
    || |||||||| || |||||||| || |||||||| ||||| || |||||||  ||||| ||||| || ||||| ||||| |||||||| |||||||| |    
T  21044636 tgcgtaccaaaacgcaccttctgcacttcagtgcattgcataacccggaaaactctctcaatctctttgagccacgtctgagctccatcagggtcatacc 21044537  T
Q  215 ttcctttgaa 224  Q
    ||||||||||    
T  21044536 ttcctttgaa 21044527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 20922214 - 20922426
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| || |  || || || ||||| || |||||| ||||||||| |||||||||||||||||||||||| | ||    
T  20922214 aggaactctctccttaacacaacccaagtaacaatcgcgccatcctgctctagagtaggttgaagactaatccaccaatcatcagcttcctcagccaact 20922313  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    |||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||  || |  |||||||| ||||| ||||| |||||||| || |||||    
T  20922314 gatgtgtaccaaatcgcaccttctgaacttcagtgcattgcataacacggaaaactctttgaatctccttgagccacgtctgtgctccatctggatcata 20922413  T
Q  213 tcttcctttgaaa 225  Q
     ||||||||||||    
T  20922414 ccttcctttgaaa 20922426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 22117489 - 22117703
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| || ||  | || |||||||| |||||||||||| |||| | ||||||| |||||||||||||| |||||     
T  22117489 aggaactctctcctaaacacaacccaagtaacaactacaccatcttgctctagggtaggtagatgactcaaccaccaaccatcagcttcctcaactagca 22117588  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      ||  ||||||| || |||||||| |||||||| || ||||| |||||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  22117589 tgtgcataccaaaacgcaccttctgaacctcagtacattgcataacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 22117688  T
Q  213 tcttcctttgaaagt 227  Q
     ||||||||||||||    
T  22117689 ccttcctttgaaagt 22117703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 20246993 - 20247205
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||| | |||||| | || |||||||| | ||||||||||||||| |||||| | ||||||||||| |||||||||     
T  20246993 aggaactctctcctaaacacagcccaaataaccacatcaccgtcttgctctaaggtaggtagaagactcacccacgagtcatcagcttcttcagctagca 20247092  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||  |  |||||||||||||| || |  || |||||||| || ||| | ||||| |||||||| ||||||||    
T  20247093 tgtgcgtaccaaaacgcaccttctgaacctttgaacactgcatcacacgaaacactctttctatctctttgagctaagtctgagctccatcagggtcata 20247192  T
Q  213 tcttcctttgaaa 225  Q
    |||||| ||||||    
T  20247193 tcttcccttgaaa 20247205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 20080973 - 20080840
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | |||||| | || || |||||| | || |||||||| |  |||||||||||||||| |||||||||||||||||    
T  20080973 aagtatctgctcaggaactctctcctaaacacaactcaggtaaccacaacaccgtcttgctctaaagtaggtagaagactaatccaccaatcatcagctt 20080874  T
Q  101 cctcagctagctgatgagtaccaaatcgtacctt 134  Q
    ||||||| |||||||| |||||||| || |||||    
T  20080873 cctcagccagctgatgtgtaccaaaacgcacctt 20080840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 21752822 - 21752952
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||||||||||||| || ||||| || |||||||| |  |||||||||||||||| |||||||||||||||||| |||||||||     
T  21752822 aggaactccctcctaaacacagcccaagtaactacagcaccatcttgctctaaagtaggtagaagactaatccaccaatcatcagcttcttcagctagca 21752921  T
Q  113 gatgagtaccaaatcgtaccttctggacctc 143  Q
      || |||||||| || |||||||| |||||    
T  21752922 tgtgcgtaccaaaacgcaccttctgaacctc 21752952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20853356 - 20853133
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||||||| || ||| |||| |||| ||| |||||||| ||||| ||||| || |   |||||| ||| |  |||||||||||||| || |    
T  20853356 aagtatctattcaggaattccctcctgaatacagtccatgtcaccaccgctccgtcttgttccaacataggtaaaaggcctacccaccaatcatctgcct 20853257  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||   || || || || || || || || ||||||| ||||||||| || | ||| ||||||||||  ||||| |||||||||||||||||    
T  20853256 cctcagccagcatgtgtgtcccgaaccgcactttttgcacctcagagcactgcatgactctgaagatcctctctacttccttcagccatgtctgggctcc 20853157  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||| ||||| |||||    
T  20853156 atcggggtcataccttcccttgaa 20853133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 22402367 - 22402457
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcct 103  Q
    |||||||||||| | |||||||||||||| |||||| | || |||||||| | ||||| ||||||||| ||||||||||||||||||||||    
T  22402367 aggaactctctcctaaacacagcccaagtaaccacaacaccgtcttgctctaaggtagatagaagactcacccaccaatcatcagcttcct 22402457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16670504 - 16670293
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||| ||| |||||| ||||||||| ||| |||||||| ||||| ||||| || |    ||||| |||||  |||||||||||||| ||||    
T  16670504 aagtatctattcaagaattctctcctgaacacagtccatgtcaccaccgctccgtcttgttccaacacaggtaaaagacctacccaccaatcatctgctt 16670405  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||   || || || || || ||||| || ||||||| ||| ||||| || | ||| ||||||||||| ||||| | ||| ||||| |||||    
T  16670404 cctcagccagcatgtgcgtcccgaaccgcaccttttgcacctcagagcattgcatgaccctgaagatcctctctatttccttcaaccaggtctgagctcc 16670305  T
Q  201 atcggggtcata 212  Q
    ||||||||||||    
T  16670304 atcggggtcata 16670293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 19858078 - 19858294
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| |||||| ||||||||||||||||||||| || || || ||   |||||  | ||| |||||||| ||||| |||||||||||||     
T  19858078 tcaggaattctctcctgaacatagcccaagtcaccacagctccatcctgttccagcacaggtaacaaacttacccaccagtcatctgcttcctcagctaa 19858177  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| |  ||||| || || ||||| || ||||| || | ||||||||| || |  |||||||||||  ||||||| ||||| || |||    
T  19858178 catgtgcgtcccaaaccacaccttttgcacttcagtacattgcataaccctgaaaatcctttcaacttccttaagccacttctgggcaccatcaggatca 19858277  T
Q  211 tatcttcctttgaaagt 227  Q
    || ||||||||||||||    
T  19858278 taccttcctttgaaagt 19858294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 21742123 - 21741925
Alignment:
Q  26 tgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaa 125  Q
    |||||||| ||||||||||  |||| || || ||||||||  | ||||  ||||| |||||||| ||||| || || ||||||| |   || ||||| ||    
T  21742123 tgaacacaacccaagtcacagcagcaccatcctgctcaagaatgggtaacagactcacccaccagtcatctgcctcttcagctaacatgtgtgtaccgaa 21742024  T
Q  126 tcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaa 224  Q
     || |||||||| |||||| |||| ||||| || | |||||||||||| | ||| || |||||  |||| |||||||| |||||||| || ||||||||    
T  21742023 ccgcaccttctgcacctcactgcattgcatgactctgaaaatcctctcaacctctttgagccacttctgagctccatctgggtcatacctccctttgaa 21741925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 21738614 - 21738409
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| |||||||| |||| ||||| ||||| || || || |||||    |||| |||||| |||||||||||||| || || ||||||| |   || |    
T  21738614 tctctcctgaacacaacccaggtcacaacagcaccatcctgttcaagcacgggtaaaagacttacccaccaatcatctgcctcttcagctaacatgtgcg 21738515  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcc 218  Q
    ||||||| || |||||||| |||||| |||| ||||| || | |||||||||||| | ||| || |||||  |||| ||||| || ||||| || || ||    
T  21738514 taccaaaccgcaccttctgcacctcactgcattgcatgactctgaaaatcctctcaacctctttgagccacttctgagctccgtcagggtcctacctccc 21738415  T
Q  219 tttgaa 224  Q
    ||||||    
T  21738414 tttgaa 21738409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 18273678 - 18273787
Alignment:
Q  118 gtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttc 217  Q
    |||||||| || |||||||| |||||  |||| ||||| || | |||||| ||||| | |||||| |||||  |||| |||||||| || |||||||| |    
T  18273678 gtaccaaaccgcaccttctgcacctcgctgcattgcatgactctgaaaattctctcaacctccttgagccacttctgagctccatcaggatcatatctac 18273777  T
Q  218 ctttgaaagt 227  Q
    ||||||||||    
T  18273778 ctttgaaagt 18273787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 21752950 - 21753006
Alignment:
Q  171 ctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||||||| || ||||| ||||| | |||||| |||||||||||||| ||||||||    
T  21752950 ctctatctctttgagccaagtctgagttccatcagggtcatatcttcccttgaaagt 21753006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7306 - 7080
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7306 aagtatcttctaaggaactctctcctgaacacagcccaagtcaccacagctccttcttgctcaagcgtaggtagaagactaacccaccaatcatcagctt 7207  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  7206 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaatatcctctcaatctccttaagccacgtctgggctcc 7107  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
     || |||||||||||||||||||||||    
T  7106 gtcagggtcatatcttcctttgaaagt 7080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 656 - 880
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  656 aagtatcttctcaggaactctctcctgaacacagcccaagtcaaaacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 755  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||    
T  756 cctcagctagctgatgagtaccaaatcgtaccttctggaccttagtgcactgcatcacatggaaaatcctctctatctccttatgccacgtctgggatcc 855  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| |||||||||||||||||||||    
T  856 atcagggtcatatcttcctttgaaa 880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 12651 - 12427
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12651 aagtatcttctcaggaactctctcctgaacacagcccaagtcaaaacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 12552  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||    
T  12551 cctcagctagctgatgagtaccaaatcgtaccttctggaccttagtgcactgcatcacatggaaaatcctctctatctccttatgccacgtctgggatcc 12452  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| |||||||||||||||||||||    
T  12451 atcagggtcatatcttcctttgaaa 12427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 41929 - 42155
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  41929 aagtatcttctcaggaactctctcctgaacacagcccaggtcacaacagctccttcttgcccaagggtaggtagaaggctaacccaccagtcatcagctt 42028  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    || ||||||||||||||||||| || |  || |||||  |||||||||||||||| || |||||||||||||| ||||| |||||||| |||||||||||    
T  42029 ccacagctagctgatgagtaccgaaccacactttctgatcctcagtgcactgcataacccggaaaatcctctcaatctctttaagccacgtctgggctcc 42128  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| ||||||||||||| |||||||||    
T  42129 atcagggtcatatcttcgtttgaaagt 42155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22114372 - 22114146
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||||||||| |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  22114372 aagtatcttctcaggaactgtctcctgaacacagctcaagtcacaacagctccttcttgctcaagggtaggtagaagactaacccaccagtcatcggctt 22114273  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  22114272 gctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcaaacggagaatcctctctatctccttaagccacgtctgggctcc 22114173  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||||    
T  22114172 atcggggtcatatcttcctttgaaagt 22114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17829937 - 17829711
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17829937 aagtatcttctcaagaactctctcctgaacacaacccaagtcaccacagctccttcttgctcaagggtaggttgaagactaacccaccaatcatcagctt 17829838  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |||||||||| |||||||||||    
T  17829837 catcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcagacggaatatcctctcaatcgccttaagccacgtctgggctcc 17829738  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  17829737 atcagggtcatatcttcctttgaaagt 17829711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 32603959 - 32604185
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||    
T  32603959 aagtatcttctcatgaactctctcctgaacacagcccaagtcaccacagctccttattgctcaagagtaggttgaagactaaccccccaatcatcagctt 32604058  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||    
T  32604059 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaatatcctctcaatctccttaagccacgtctggcctcc 32604158  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||  |||||||||||||||||||||||    
T  32604159 attagggtcatatcttcctttgaaagt 32604185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30310111 - 30309885
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||| || |||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||    
T  30310111 aagtatcttctcaggaactctctcctgaacacagcccaagttacaacagctccatcttgttcaaggttaggtagcagactaacccaccaatcatcagctt 30310012  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| ||||| || ||||| |||||||||||    
T  30310011 cctcagctagctgatgagtaccaaatcgtactttttggacctcggtgcactgcatcacacgaaaaatcctctcaatctcttttagccacgtctgggctcc 30309912  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||||    
T  30309911 atcggggtcatatcttcctttgaaagt 30309885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22043632 - 22043858
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  22043632 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccagcaatcatcagctt 22043731  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| | |||||||||||| ||||| |||||||| |||||||||||    
T  22043732 cctcagctagctgatgcgtaccgaatcgtactttctggacctcagtgcactgcatcactctgaaaatcctctccatctctttaagccacgtctgggctcc 22043831  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  22043832 atctgggtcatatcttcctttgaaagt 22043858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 15537197 - 15537420
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||| ||| |    
T  15537197 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcattagcct 15537296  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  15537297 cctcagctagctgatgcgtaccgaatcgcactttctgaacctcagtgcactgcatcacaaggaaaatcctctcgatctccttaagccacgtctgggctcc 15537396  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  15537397 atcagggtcatatcttcctttgaa 15537420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19116211 - 19116437
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  19116211 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 19116310  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  19116311 cctcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 19116410  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  19116411 atcagggtcataacgtcctttgaaagt 19116437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18860388 - 18860614
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||| ||||    
T  18860388 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggaagaagagcaacccaccagtcatcggctt 18860487  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  18860488 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 18860587  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  18860588 atcagggtcataacgtcctttgaaagt 18860614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 19481043 - 19480817
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  |||||||||||| |||||||    
T  19481043 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccaatcgtcagctt 19480944  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||| ||||||||| || || |||||  |||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  19480943 cctcggccagctgattagtaccaaaccgaactttctgatcctccgtgcactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctcc 19480844  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  19480843 atcagggtcataacgtcctttgaaagt 19480817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19497126 - 19497352
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  |||||||||||| |||||||    
T  19497126 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccaatcgtcagctt 19497225  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||| ||||||||| || || |||||  |||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  19497226 cctcggccagctgattagtaccaaaccgaactttctgatcctccgtgcactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctcc 19497325  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  19497326 atcagggtcataacgtcctttgaaagt 19497352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20015233 - 20015007
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  20015233 aagtatcttctcaggaactctctcttgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 20015134  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || | ||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  20015133 cctcggccaactgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 20015034  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  20015033 atcagggtcataacgtcctttgaaagt 20015007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 17670992 - 17670769
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  17670992 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 17670893  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||||||||||||||| || |||||  |||| ||||||||||| || ||||| |||||||| |||||||||||||| |||||||||||    
T  17670892 cctcggccagctgatgagtaccaaatcgcactttctgatcctccgtgcactgcataacccggaagatcctctcaatctccttaagccacgtctgggctcc 17670793  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| |||||||| | |||||||||    
T  17670792 atcagggtcataacgtcctttgaa 17670769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17354865 - 17354639
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || ||||| || ||| | ||||| |||||||||||  |||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  17354865 aagtatctgcttaggaaatccctcctaaacactgcccaagtcacagcagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 17354766  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| |||||||| || |||||||| || || || || ||||| ||||||||||  || || |||||||||||||| |||||||||||    
T  17354765 cctcagctagctgatgtgtaccaaaacgcaccttctgaacttcggtacattgcataacacggaaaactctttcgatctccttaagccacgtctgggctcc 17354666  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  17354665 atcggggtcatatcttcccttgaaagt 17354639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 21163497 - 21163271
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | ||||||||||||||||   |||| || |||||||| ||||||||||||||||||||||||| |||||||||||    
T  21163497 aagtatctgcttaggaactccctcctaaacacagcccaagtcatagcagcaccatcttgctctagggtaggtagaagactaacccacccatcatcagctt 21163398  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||  || || |||||||||||||| | |||||||||    
T  21163397 cctcagccagctgatgtgtaccaaatcgcaccttctgaacttcagtgcattgcataacacggaaaactctgtcgatctccttaagccacgcctgggctcc 21163298  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||| ||||||||| ||||||||    
T  21163297 atcggggtaatatcttcccttgaaagt 21163271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 19981793 - 19982007
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| | ||  || |||||||| |  |||||||||||||||| |||||||||||||||||||||||| ||||    
T  19981793 aggaactccctcctaaacacagcccaagtcacaatagtaccgtcttgctcgaaagtaggtagaagactaatccaccaatcatcagcttcctcagccagct 19981892  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    ||||||||||||| || |||||||| || || ||||||||||||||||||||||  ||||| |||||||||||||| ||||||||||| || ||||||||    
T  19981893 gatgagtaccaaaacgcaccttctgaacttcggtgcactgcatcacacggaaaactctctcaatctccttaagccacgtctgggctccctcagggtcata 19981992  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  19981993 tcttcccttgaaagt 19982007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22117145 - 22116919
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| |||  |  ||||||||| ||||||||||    
T  22117145 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagagcagcaacccaccagtcatcagctt 22117046  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || ||||||||||||||  |||| ||||||||||||| ||||||    
T  22117045 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaaaatcctctcagtctctttaagccatgtctaggctcc 22116946  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  22116945 atcagggtcataacgtcctttgaaagt 22116919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22125929 - 22125703
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  22125929 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 22125830  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || ||||| ||||||||  |||| |||||||| |||||||||||    
T  22125829 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaatatcctctcagtctctttaagccacgtctgggctcc 22125730  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||  |||||||| | ||||||||||||    
T  22125729 ataagggtcataacgtcctttgaaagt 22125703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 18880610 - 18880398
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctga 114  Q
    |||||||||| | |||||||||||||| |||||| | || | |||||| | ||||||||||||||| ||||||||||||||||||||||||||||||       
T  18880610 gaactctctcctaaacacagcccaagtaaccacatcaccgttttgctctaaggtaggtagaagactcacccaccaatcatcagcttcctcagctagcatg 18880511  T
Q  115 tgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatc 214  Q
    || |||||||| || |||||||| ||||  |  |||||||||||  |||| |  ||||| ||||| || ||||| |||||||||||||| ||||||||||    
T  18880510 tgcgtaccaaaacgcaccttctgaacctttgaacactgcatcacgtggaacactctctcaatctctttgagccacgtctgggctccatcagggtcatatc 18880411  T
Q  215 ttcctttgaaagt 227  Q
    |||| ||||||||    
T  18880410 ttcccttgaaagt 18880398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 6518198 - 6518409
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctga 114  Q
    |||||||||| | |||||||| ||||| |||||| | || |||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||       
T  6518198 gaactctctcctaaacacagctcaagtaaccacaacaccgtcttgctctagggtaggtagaagactcacccaccagtcatcagcttcttcagctagcatg 6518297  T
Q  115 tgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatc 214  Q
    || |||||||| |  |||||||| ||||| |  ||||||||||||||||| |  |||||||||||||| ||||  ||||| |||||||| ||  ||||||    
T  6518298 tgcgtaccaaaacacaccttctgaacctctgaacactgcatcacacggaacactctctctatctccttgagcctcgtctgagctccatcaggaacatatc 6518397  T
Q  215 ttcctttgaaag 226  Q
    | || |||||||    
T  6518398 tacccttgaaag 6518409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 22524239 - 22524450
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || ||||| || |||||||| || ||||||| |||||| ||||| ||||||||||||||||||||||||     
T  22524239 aggaactctctcctaaacacagcccaagtaacaacagcgccatcttgctctagagtaggtaaaagactcacccatcaatcatcagcttcctcagctagca 22524338  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || || ||||| |||||||| || | ||| || || || |  ||||||||||| || ||||| ||||| ||| |||| ||||||||    
T  22524339 tgtgcgtaccaaaacgcactttctgaacctcagtacattacataacccgaaacactctctctatctctttgagccacgtctgagcttcatcagggtcata 22524438  T
Q  213 tcttcctttgaa 224  Q
    ||||||||||||    
T  22524439 tcttcctttgaa 22524450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 22420848 - 22420634
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || ||||| || |||| ||| |||  |||||||||  ||| ||||||||||||||||||||||||||||     
T  22420848 aggaactctctcataaacacagcccaagtaacaacagcaccatcttactctaggacaggtagaagggtaatccaccaatcatcagcttcctcagctagca 22420749  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| |||||||| ||||   | || ||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  22420748 tgtgcgtaccaaaacgcaccttctgaacctcagtacactcattaacccggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 22420649  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  22420648 tcttcccttgaaagt 22420634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 22994546 - 22994716
Alignment:
Q  55 tcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgca 154  Q
    |||||||| |||  |||||||||||||| ||||||||||||||||||||||||||||  | | |||||||| || |||||||| | ||||||||| ||||    
T  22994546 tcttgctctaggacaggtagaagactaatccaccaatcatcagcttcctcagctagcataagcgtaccaaaacgcaccttctgaatctcagtgcattgca 22994645  T
Q  155 tcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaa 225  Q
    | || || || |  ||||| ||||| || ||||| ||||| |||||||| |||||||||||||||||||||    
T  22994646 taacccgaaacactctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcctttgaaa 22994716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 21390801 - 21390704
Alignment:
Q  28 aacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaa 125  Q
    ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||| || ||||||||    
T  21390801 aacacagcccatgtcacaacagcaccgtcttgctctagggtaggtagaagactaacccaccaatcatcagcttcctcggccaactgttgtgtaccaaa 21390704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 21780127 - 21780030
Alignment:
Q  28 aacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaa 125  Q
    ||||||||||| ||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||| || ||||||||    
T  21780127 aacacagcccatgtcacaacagcaccgtcttgctctagggtaggtagaagactaacccaccaatcatcagcttcctcggccaactgttgtgtaccaaa 21780030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 21929252 - 21929465
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    |||| ||||||||| |||| | |||||| ||||| ||| | || || ||||||||    |||| |||||| |||||||||||||||||||| |||||||     
T  21929252 tcagaaactctctcctgaataaagcccaggtcacaacaacaccatcctgctcaagcacgggtaaaagacttacccaccaatcatcagcttcttcagctaa 21929351  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |  ||| |||||||| || |||||||| |||||| |||| ||||| || | |||||||||||| |  ||||| |||||  |||| |||||||| || |||    
T  21929352 catatgcgtaccaaaccgcaccttctgcacctcactgcattgcatgactctgaaaatcctctcaacttccttgagccacttctgagctccatcaggatca 21929451  T
Q  211 tatcttcctttgaa 224  Q
    || || ||||||||    
T  21929452 tacctccctttgaa 21929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 21330398 - 21330606
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| | || ||||||||||| || ||| | || |||| ||| |||  ||||||||||||||||| ||| |||||| ||||||||||||||   |    
T  21330398 aactctctcctaaatacagcccaagtaacaacaacaccatcttactctaggacaggtagaagactaacccgccagtcatcaacttcctcagctagcatgt 21330497  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
    | || || || || |||||||| |||||  | ||||||||||| | ||| |||||||| ||||| ||||||||  |||| |||||||| ||||| || ||    
T  21330498 gcgtgccgaaccgcaccttctgcacctcgctacactgcatcactctgaagatcctctcaatctctttaagccacttctgagctccatcagggtcgtacct 21330597  T
Q  216 tcctttgaa 224  Q
    ||| |||||    
T  21330598 tccgttgaa 21330606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22004048 - 22003825
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||  || |||||| | || ||||||||||| |  ||||| || |||||||| |||  ||||||||||||||||||||| ||||||||||    
T  22004048 aagtatctgctcaaaaattctctcctaaatacagcccaagtaataacagcaccatcttgctctaggacaggtagaagactaacccaccagtcatcagctt 22003949  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||| |   || || || || || |||||||| |||||| | ||||||||||| | ||| ||||||||  | || || |||||  |||| |||||    
T  22003948 cctcagctaccatgtgcgtgccgaaccgcaccttctgcacctcactacactgcatcactctgaagatcctctcagtttctttgagccacttctgagctcc 22003849  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||| || ||||| |||||    
T  22003848 atcagggtcgtaccttcccttgaa 22003825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 224
Target Start/End: Complemental strand, 21969051 - 21968858
Alignment:
Q  31 acagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgta 130  Q
    ||||||||||| ||   ||| || |||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||   || || || || || |    
T  21969051 acagcccaagtaacaggagcaccatcttgctctaggacaggtagaagactaacccaccagtcatcagcttcctcaactagcatgtgcgtgccgaaccgca 21968952  T
Q  131 ccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaa 224  Q
    ||||||| |||||| | ||||||||||| | ||| ||||||||  |||| || |||||  |||| |||||||| ||||| || ||||| |||||    
T  21968951 ccttctgcacctcactacactgcatcactctgaagatcctctcagtctctttgagccacttctgagctccatcagggtcgtaccttcccttgaa 21968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 21672341 - 21672553
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||| ||||||||| ||| |||| || |||||||| | | |||| ||||| |||| |||||| ||||||||||| || | |  |     
T  21672341 aggaactccctcctaaacagagcccaagtaaccgcagcaccatcttgctctaagttaggcagaaggctaatccaccagtcatcagcttcttcggttgaca 21672440  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||  | ||||| |||||| |||||||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  21672441 tatgcgttccaaaacgcaccttctgaccttcagtacactgcttcacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 21672540  T
Q  213 tcttcctttgaaa 225  Q
    |||||| ||||||    
T  21672541 tcttcccttgaaa 21672553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 6606436 - 6606213
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||| || ||||||||||| ||| | ||||||||||| ||||||||||| || ||||| |||||   ||||| |||||| |||||||||||||| || |    
T  6606436 aagtacctgctcaggaactccctcctaaacacagcccaggtcaccacagcaccatcttgttcaagcacaggtaaaagacttacccaccaatcatctgcct 6606337  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||||| |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  ||||||||||    
T  6606336 cttcagctaacatgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctcc 6606237  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
     || ||||| || |||||||||||    
T  6606236 gtcagggtcgtaccttcctttgaa 6606213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 21981921 - 21981698
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||  || |||||| | || ||||||||||| |  ||| | || |||||||| |||  ||||||||||||||||||||| ||||||||||    
T  21981921 aagtatctactcaaaaattctctcctaaatacagcccaagtaataacaacaccatcttgctctaggacaggtagaagactaacccaccagtcatcagctt 21981822  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||| |   || || || || || |||||||| |||||| | ||||||||||| | ||| ||||||||  | || || |||||  |||| |||||    
T  21981821 cctcagctaccatgtgcgtgccgaaccgcaccttctgcacctcactacactgcatcactctgaagatcctctcagtttctttgagccacttctgagctcc 21981722  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||| || ||||| |||||    
T  21981721 atcagggtcgtaccttcccttgaa 21981698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 21390691 - 21390633
Alignment:
Q  169 ctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||| ||||| |||||||| |||||||||||||||||||| |||||||| ||||||||    
T  21390691 ctctcaatctctttaagccacgtctgggctccatcggggtcgtatcttcccttgaaagt 21390633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 21780017 - 21779959
Alignment:
Q  169 ctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||| ||||| |||||||| |||||||||||||||||||| |||||||| ||||||||    
T  21780017 ctctcaatctctttaagccacgtctgggctccatcggggtcgtatcttcccttgaaagt 21779959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21998407 - 21998303
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||  || |||||| | || ||||||||||| |  ||| | || |||||||| |||  || |||||||||||||||||| ||||||||||    
T  21998407 aagtatctgctcaaaaattctctcctaaatacagcccaagtaataacaacaccatcttgctctaggacagatagaagactaacccaccagtcatcagctt 21998308  T
Q  101 cctca 105  Q
    |||||    
T  21998307 cctca 21998303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 22027105 - 22027023
Alignment:
Q  142 tcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaa 224  Q
    |||| ||||||||| || | |||||||||||| |  |||||||||||  ||||||| |||||||| ||||| ||||| |||||    
T  22027105 tcagagcactgcatgaccctgaaaatcctctccacttccttaagccacttctgggcaccatcgggatcataccttcccttgaa 22027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 179; Significance: 9e-97; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 626 - 852
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  626 aagtatcttctcaagaactctctcctgaacacagcccaagtcaccacagctccttcttgctcaagggtaggttgaagactaacccaccaatcatcagctt 725  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| || |||||||| |||||||||||||| |||||||||||    
T  726 cgtcagctagctgatgagtaccaaatcgtaccttctgaacctcaatgcactgcatcacacgaaatatcctctcaatctccttaagccacgtctgggctcc 825  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  826 atcagggtcatatcttcctttgaaagt 852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 139137 - 138900
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctcctt-----------cttgctcaagggtaggtagaagactaacccacca 89  Q
    |||||||| |||||||||| |||| |||||| ||||||||||||||||||||||            || |||||||||||||| ||||||||| ||||||    
T  139137 aagtatcttctcaggaactttctcctgaacatagcccaagtcaccacagctcctcagcttcctcagctagctcaagggtaggttgaagactaaaccacca 139038  T
Q  90 atcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccat 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||| |||||||| ||||||||||||||     
T  139037 atcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacatcagtgcactatttcacacggaatatcctctcaatctccttaagccac 138938  T
Q  190 gtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||| |||||||||||||||||||||||    
T  138937 gtctgggctccatcagggtcatatcttcctttgaaagt 138900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 15971 - 15913
Alignment:
Q  169 ctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||||||||| || ||||  ||||| |||| ||| |||||||||||||||||||||||    
T  15971 ctctctatctctttgagcccagtctgagctctatcagggtcatatcttcctttgaaagt 15913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16725983 - 16725757
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16725983 aagtatcttctcaggaactctctcctgaacacaacccaagtcacaatagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 16725884  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| || |||||||||||    
T  16725883 cctcagctagctaatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaatatcctttcaatctccttaagtcacgtctgggctcc 16725784  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  16725783 atcagggtcatatcttcctttgaaagt 16725757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17702997 - 17702771
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17702997 aagtatcttctcaggaactctctcctgaacacaacccaagtcacaatagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 17702898  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| || |||||||||||    
T  17702897 cctcagctagctaatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaatatcctttcaatctccttaagtcacgtctgggctcc 17702798  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  17702797 atcagggtcatatcttcctttgaaagt 17702771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 9592101 - 9592327
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  ||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||    
T  9592101 aagtatcttctcaggaactctctcctgaacacagcccaagtcacatcagctccatcttgttcaaggttaggtagcagactaacccaccaatcatcagctt 9592200  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  9592201 cctcagctagctgatgagtaccaaatcgtactttctggaccttagtgcactacatcacacggaaaatcctctcaatctctttaagccacgtctgggctcc 9592300  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||||    
T  9592301 atcggggtcatatcttcctttgaaagt 9592327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15157593 - 15157367
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | || |||||||||||||| |||||||| || ||| |||||||||||||||||  ||||||||| ||||||||||    
T  15157593 aagtatcttctcaggaactctctcctaaaaacagcccaagtcacaacagctccctcctgcccaagggtaggtagaagagcaacccaccagtcatcagctt 15157494  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  15157493 cctcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 15157394  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  15157393 atcagggtcataacgtcctttgaaagt 15157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 11233749 - 11233523
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| | |||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  11233749 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaatagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 11233650  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  11233649 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 11233550  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  11233549 atcagggtcataacgtcctttgaaagt 11233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 11549638 - 11549412
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||| || |||||||||||  |||||||| ||||||  || |||||| |||||||||||||||    
T  11549638 aagtatcttctcaggaactctctcctgaacacagcccaagtaacaacagctccttcacgctcaaggttaggtaacaggctaacctaccaatcatcagctt 11549539  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||  || |||||||| |||||||| || || |||||  | |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  11549538 cctttgccagctgatgcgtaccaaaccgcactttctgatcttcagtgcactgcataacacggaaaatcctctcaatctccttaagccacgtctgggctcc 11549439  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  11549438 atcagggtcatatcttcctttgaaagt 11549412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 11984729 - 11984927
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |    
T  11984729 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagcct 11984828  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctc 199  Q
    |||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||| ||||||||||    
T  11984829 cctcagctagctgatgcgtaccgaatcgcactttctggacctcagtgcactgcatcacatgaaaaatcctctccatctccttaatccacgtctgggctc 11984927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 12691235 - 12691461
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||| || ||| ||||||| ||||| ||| ||||||  |||||||||||||||||||||||||    
T  12691235 aagtatcttctcaggaactctctcctgaacacagcccaagtaacaacaactccttcatgctcgaggttaggtaatagactaacccaccaatcatcagctt 12691334  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||| |||||||| || || |||||  | |||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||||    
T  12691335 cctctgccagctgatgcgtaccaaaccgcactttctgatcttcagtgcactgcataacacgaaaaatcctctcaatctctttaagccacgtctgggctcc 12691434  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  12691435 atcagggtcatatcttcctttgaaagt 12691461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13689775 - 13690001
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  13689775 aagtatcttctcaggaactccctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 13689874  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  13689875 cctcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 13689974  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  13689975 atcagggtcataacgtcctttgaaagt 13690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 44787887 - 44787661
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  44787887 aagtatcttctcaggaactctctcctgaacacagcccaagtcacgacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 44787788  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  44787787 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 44787688  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  44787687 atcagggtcataacgtcctttgaaagt 44787661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 8711339 - 8711564
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  8711339 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 8711438  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  8711439 cctcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 8711538  T
Q  201 atcggggtcatatcttcctttgaaag 226  Q
    ||| |||||||| | |||||||||||    
T  8711539 atcagggtcataacgtcctttgaaag 8711564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 14958242 - 14958468
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||| ||| |||||   |||||||||||||||||||||||||    
T  14958242 aagtatcttctcaggaactctctcctgaacacagcccaagtaacaacagctccttcatgctcgaggttaggtgacagactaacccaccaatcatcagctt 14958341  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||| |||||||| || || |||||  | |||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||| |    
T  14958342 cctctgccagctgatgcgtaccaaaccgcactttctgatcttcagtgcactgcataacacggaaaatcctctcaatctctttaagccacgtcagggctac 14958441  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  14958442 atcagggtcatatcttcctttgaaagt 14958468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 18586707 - 18586482
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | || |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  18586707 aagtatcttctcaggaactctctcctcaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 18586608  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| |  || |||||  |||| ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||||    
T  18586607 cctcggccagctgatgagtaccaaaccacactttctgatcctccgtgcactgcataactcggaaaatcctctcaatctctttaagccacgtctgggctcc 18586508  T
Q  201 atcggggtcatatcttcctttgaaag 226  Q
    ||| |||||||| | |||||||||||    
T  18586507 atcagggtcataacgtcctttgaaag 18586482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18181476 - 18181700
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  18181476 aagtatcttctcaggaactctctcctgaacacggcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 18181575  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| | |||||| ||||||||||| || || |||||  ||||| |||||||||| || || ||||| ||||| |||||||||||||| |||||||||||    
T  18181576 cctcggttagctgttgagtaccaaaccgcactttctgatcctcaatgcactgcataacccgaaaaattctctcaatctccttaagccacgtctgggctcc 18181675  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    | | |||||||| | ||||||||||    
T  18181676 accagggtcataacgtcctttgaaa 18181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 14336130 - 14336317
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||||||||||||||||||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  14336130 aagtatcttctcaggaactctctcttgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 14336229  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagcca 188  Q
    |||| || ||||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||| ||||||||||||||    
T  14336230 cctcggccagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagcca 14336317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 10874186 - 10874412
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| || ||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||| ||||||    
T  10874186 aagtatcttctcaggaactccctcctgaaaacggcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcaccagctt 10874285  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || || ||||||||||| |||||||||||||| |||||||||||    
T  10874286 cctcggccagctgatgagtaccaaaccgaactttctgatcctccgtgcactgcataacccgaaaaatcctctcaatctccttaagccacgtctgggctcc 10874385  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||  |||||||| | ||||||||||||    
T  10874386 ataagggtcataacgtcctttgaaagt 10874412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 15145444 - 15145235
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||||||| || | ||||||||||||||||| ||| | || ||||| || |  ||||||| |||||||  ||||||||||||||| ||||||||||||     
T  15145444 aggaactctgtcctaaacacagcccaagtcacaacaacaccgtcttgttccaatgtaggtaaaagactagtccaccaatcatcagcctcctcagctagca 15145345  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || |||||||| || ||||||||||||||||| ||||| |  ||||| |||||||||||||| |||||||||||||| ||||||||    
T  15145344 tatgcgttccaaaacgcaccttctgaacttcagtgcactgcatcacgcggaacactctctcaatctccttaagccacgtctgggctccatcagggtcata 15145245  T
Q  213 tcttcctttg 222  Q
     |||||||||    
T  15145244 ccttcctttg 15145235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 11526878 - 11526664
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | ||||||||| |||| || || || || |||||||  |||||| |||||||||| |||||||||||||||||||| |||||||||     
T  11526878 aggaactctctcctaaacacagcctaagtaacaaccgcgccatcttgctatagggtatgtagaagactcacccaccaatcatcagcttcttcagctagca 11526779  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| |||||||| || |||||||| ||||||| ||| ||||| |||||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  11526778 tatgtgtaccaaaacgcaccttctgaacctcagggcattgcataacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 11526679  T
Q  213 tcttcctttgaaagt 227  Q
    | ||||||| |||||    
T  11526678 ttttcctttaaaagt 11526664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 14043444 - 14043658
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||| |||||| | |||||||||||||| |||||||| || |||||||  ||   |||||||||||||| ||||||||||||||||||||||||||||     
T  14043444 aggaattctctcctaaacacagcccaagtaaccacagcaccatcttgctttagaacaggtagaagactaatccaccaatcatcagcttcctcagctagca 14043543  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || || ||||| ||||| || |||||||| || || || |  ||||||||||| || ||||| ||||| ||||||||  |||||||    
T  14043544 tgtgcgtaccaaaacgcactttctgaacctctgtacactgcataacccgaaacactctctctatctctttgagccacgtctgagctccatcaaggtcata 14043643  T
Q  213 tcttcctttgaaagt 227  Q
    |||||||||||||||    
T  14043644 tcttcctttgaaagt 14043658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 14353474 - 14353688
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||| |||||| | |||||||||||||| |||||||| || |||||||  ||   |||||||||||||| ||||||||||||||||||||||||||||     
T  14353474 aggaattctctcctaaacacagcccaagtaaccacagcaccatcttgctttagaacaggtagaagactaatccaccaatcatcagcttcctcagctagca 14353573  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || || ||||| ||||| || |||||||| || || || |  ||||||||||| || ||||| ||||| ||||||||  |||||||    
T  14353574 tgtgcgtaccaaaacgcactttctgaacctctgtacactgcataacccgaaacactctctctatctctttgagccacgtctgagctccatcaaggtcata 14353673  T
Q  213 tcttcctttgaaagt 227  Q
    |||||||||||||||    
T  14353674 tcttcctttgaaagt 14353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 227
Target Start/End: Complemental strand, 12801694 - 12801549
Alignment:
Q  82 acccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctcct 181  Q
    |||||||| ||||||||||| ||||||| |   || || ||||| || |||||||| |||||| |||||||||| || | |||||||||||| | |||||    
T  12801694 acccaccagtcatcagcttcttcagctaacatgtgcgtcccaaaccgcaccttctgcacctcactgcactgcatgactctgaaaatcctctcaacctcct 12801595  T
Q  182 taagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||  |||| ||||| || |||||||| || |||||||||||    
T  12801594 tgagccacttctgagctccgtcagggtcatacctccctttgaaagt 12801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 15114906 - 15115114
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| | || ||||||||||| || ||||| || |||||||| |||  |||||||||||||| |||||| ||||||||||||| |||||||   |    
T  15114906 aactctctcctaaatacagcccaagtaacaacagcaccatcttgctctaggacaggtagaagactaatccaccagtcatcagcttcctgagctagcatgt 15115005  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
    | || || || || |||||||| |||||  | ||||||||||| |  |  |||||||| ||||| || |||||  | || |||||||| ||||| || ||    
T  15115006 gcgtgccgaaccgcaccttctgcacctcgctacactgcatcactctaacgatcctctcaatctctttgagccacttttgagctccatcagggtcgtacct 15115105  T
Q  216 tcctttgaa 224  Q
    ||| |||||    
T  15115106 tcccttgaa 15115114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 15099224 - 15099009
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || || | ||||||   |||||  ||||| ||||||||   |||||||||||||||||     
T  15099224 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcctactcaagcacaggtaacagacttacccaccagcaatcagcttcctcagctaa 15099125  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || ||||| || || |||||||| ||||| |  |||| ||| || | |||||| || || | |||||| |||||  |||| ||||| || ||||||    
T  15099124 catgtgcgtaccgaaccgcaccttctgcacctctg-acactacataactctgaaaattctttcaacctccttgagccacttctgagctccgtcagggtca 15099026  T
Q  211 tatcttcctttgaaagt 227  Q
    || |||| |||||||||    
T  15099025 taccttcatttgaaagt 15099009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 48810547 - 48810457
Alignment:
Q  80 taacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcct 170  Q
    ||||||||||||||||||||||||| |||| |   || |||||||| || |||||||| || ||| |||| ||||| || |||||||||||    
T  48810547 taacccaccaatcatcagcttcctctgctaacatgtgcgtaccaaagcgcaccttctgaacttcactgcattgcatgacccggaaaatcct 48810457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 12712149 - 12711963
Alignment:
Q  26 tgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaa 125  Q
    ||||||||||| | |||||||| || || || ||||||||   |||||  ||||| ||||||||||| ||||| ||||| ||||||   || || |||||    
T  12712149 tgaacacagcctaggtcaccaccgcaccgtcctgctcaagcacaggtaacagacttacccaccaatcgtcagcctcctctgctagcatgtgcgtcccaaa 12712050  T
Q  126 tcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     || ||||| || |  |||| ||||||||| || | ||| |||||||| | |||||| ||||| ||||| || ||||| || |||||    
T  12712049 ccgcaccttttgaatttcagagcactgcatgaccctgaagatcctctccacctccttcagccaagtctgagcaccatctggatcata 12711963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 12798006 - 12797952
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaag 65  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || || ||||||||    
T  12798006 tcaggaattctctcatgaacacagcccaggtcaccacagcaccatcctgctcaag 12797952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 14260739 - 14260585
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| ||||||||||||| ||||  ||||| || || || |||||    |||| |||||| |||||||||||||| || |  ||||||| |   || |    
T  14260739 tctctcctgaacacagcccaggtcatgacagcaccatcctgttcaagcacgggtaaaagacttacccaccaatcatctgcctattcagctaacatgtgcg 14260640  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctc 173  Q
    ||||||| || |||||||| |||||| |||| ||||| || | ||||||||||||    
T  14260639 taccaaaccgcaccttctgcacctcactgcattgcatgactctgaaaatcctctc 14260585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 167; Significance: 1e-89; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 138463 - 138689
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |    
T  138463 aagtatcttctcaggaactctctcctgaacacaacccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagcct 138562  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||| |||||||| |||||||||||    
T  138563 cctcagctagctgatgagtaccaaatcgtactttctggacctcggtgcactgcatcacacggaaaatcctctcagtctctttaagccacgtctgggctcc 138662  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||||    
T  138663 atcggggtcatatcttcctttgaaagt 138689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 425076 - 425302
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  425076 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagttt 425175  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| || || |||||  | | |||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||||    
T  425176 cctcagctagctgatgagtaccaaaccgcactttctgatcttgagtgcattgcataacacggaaaatcctctcaatctctttaagccacgtctgggctcc 425275  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  425276 atcagggtcatatcttcctttgaaagt 425302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22462545 - 22462319
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||   ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  22462545 aagtatcttctcaggaactctctcctgaacacagaccaagtcatagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagctt 22462446  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||||||||    
T  22462445 cctcagctagctgatgagtaccaaatcgtactttctggacctcagtgcactgcatcacacggaaaatcctttcaatctctttaagccacgtctgggctcc 22462346  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||| ||||||||||||||||||||||    
T  22462345 atcgtggtcatatcttcctttgaaagt 22462319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 24873817 - 24873591
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||    
T  24873817 aagtatcttctcaggaactctctcctgaacacagcccaggtcacaacagctccttcttgcccaagggtaggtagaaggccaacccaccagtcatcagctt 24873718  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| || || |||||  | |||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||    
T  24873717 cctcagctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctcc 24873618  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  24873617 atcagggtcatatcttcctttgaaagt 24873591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 3 - 227
Target Start/End: Complemental strand, 23116121 - 23115897
Alignment:
Q  3 gtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcc 102  Q
    |||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  23116121 gtatcttctcaggaactctctcctgaacacagcccaagtcaaaacagctccttcttgcccaagggtaggtagaaggctaacccaccagtcatcagcttcc 23116022  T
Q  103 tcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccat 202  Q
    ||||||||||||||||||||||| || || |||||  | |||||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||||||    
T  23116021 tcagctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacacggaagatcctctcaatctctttaagccacgtctgggctccat 23115922  T
Q  203 cggggtcatatcttcctttgaaagt 227  Q
    | |||||||||||||||||||||||    
T  23115921 cagggtcatatcttcctttgaaagt 23115897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 21320067 - 21319841
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| | ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  21320067 aagtatctgcttaggaactctctcctaaacacagcccaagtcacaacagctccatcttgctctagggtaggtagaagactaacccaccaatcatcaactt 21319968  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||  ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||    
T  21319967 cctcagccagctgatctgtaccaaatcgcaccttctgaacctcggtgcactgcatcacacggaaaatcctttcgatctccttgagccacgtctgggctcc 21319868  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||| ||||||||    
T  21319867 atcagggtcatatcttcccttgaaagt 21319841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 24704546 - 24704320
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  |||| || |||||||| ||| |||||||||| ||||||||||||||||||||||    
T  24704546 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagcaccatcttgctctaggttaggtagaaggctaacccaccaatcatcagctt 24704447  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| |||||||| || || ||||| ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  24704446 cctcagctagctgatgcgtaccaaaacgcactttctgaacctcagtttactgcatcacacggaaaatcctctcgatctccttaagccacgtctaggctcc 24704347  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||| ||||||||    
T  24704346 atcagggtcatatcttcccttgaaagt 24704320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 24656722 - 24656499
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||| |||||| ||||  |||| || |||||||| ||| |||| ||||| ||||||||||||||| ||||||    
T  24656722 aagtatcttctcaggaactctctcctgaacactgcccaactcacagcagcaccgtcttgctctaggttaggcagaaggctaacccaccaatcaacagctt 24656623  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||| ||||| |  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  24656622 cctcagctagctgatgcgtaccgaatcgcaatttctgaacctcagtgcactgcatcacacggaaaatcctctcaatctccttaagccacgtctgggctcc 24656523  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||||||||||||||||||||||||    
T  24656522 atcggggtcatatcttcctttgaa 24656499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16931883 - 16932109
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  16931883 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 16931982  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16931983 cntcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 16932082  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  16932083 atcagggtcataacgtcctttgaaagt 16932109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16984616 - 16984842
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  16984616 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 16984715  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16984716 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 16984815  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  16984816 atcagggtcataacgtcctttgaaagt 16984842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 17002376 - 17002602
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  17002376 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 17002475  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  17002476 cctcggccagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 17002575  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  17002576 atcagggtcataacgtcctttgaaagt 17002602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24678866 - 24679092
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  24678866 aagtatctgcttaggaactccctcctaaacacagcccaagtcacaacagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 24678965  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||| ||||||||||| ||||||||  | ||| |||| ||||| ||||||||||  ||||| ||||||||||| || |||||||||||    
T  24678966 cctcggcaagctgatgtgtaccaaatcgcaccttctgatcttcaatgcattgcataacacggaaaactctctcgatctccttaagtcacgtctgggctcc 24679065  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  24679066 atcggggtcatatcttcccttgaaagt 24679092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 44382637 - 44382409
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  44382637 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 44382538  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcat--cacacggaaaatcctctctatctccttaagccatgtctgggct 198  Q
    |||| |||||||||||||||||||| || ||||||||  | ||||||||||||||  ||| |||||||||||||| |||||||||||||| |||||||||    
T  44382537 cctcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataacactcggaaaatcctctcaatctccttaagccacgtctgggct 44382438  T
Q  199 ccatcggggtcatatcttcctttgaaagt 227  Q
    ||||| |||||||| | ||||||||||||    
T  44382437 ccatcagggtcataacgtcctttgaaagt 44382409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 9338958 - 9339184
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  9338958 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 9339057  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  9339058 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 9339157  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  9339158 atcagggtcataacgtcctttgaaagt 9339184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 9487592 - 9487818
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  9487592 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 9487691  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  9487692 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 9487791  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  9487792 atcagggtcataacgtcctttgaaagt 9487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23028526 - 23028300
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||||||||||||||  |||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  23028526 aagtatctgcttaggaactccctcctaaacacagcccaagtcacagcagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 23028427  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||| ||| ||||||||||| ||||||||  | |||||||||||||||||||||||||  ||||| |||||||||||||| | || ||||||    
T  23028426 cctcagccagctaatgtgtaccaaatcgcaccttctgatcttcagtgcactgcatcacacggaaaactctctcgatctccttaagccacgactaggctcc 23028327  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
     || |||||||||||||| ||||||||    
T  23028326 gtcagggtcatatcttcccttgaaagt 23028300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 20321359 - 20321576
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  20321359 aagtatctgcttaggaactccctcctaaacacagcccaagtcacaacagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 20321458  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| | |||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||  || || ||||| |||||||| ||||||| |||    
T  20321459 cctcagccaactgatgtgtaccaaatcgcaccttctgaacttcagtgcattgcataacacggaaaactctttcaatctctttaagccacgtctgggatcc 20321558  T
Q  201 atcggggtcatatcttcc 218  Q
    ||||||||||||||||||    
T  20321559 atcggggtcatatcttcc 20321576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 10872226 - 10872452
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  10872226 aagtatcttctcaggaactccctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 10872325  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||||||||||||||| || |||||  |||| ||||||||||| || ||| |||||||||| |||||||||||||| |||||||||||    
T  10872326 cctcggccagctgatgagtaccaaatcgcactttctgatcctccgtgcactgcataacccggtaaatcctctcaatctccttaagccacgtctgggctcc 10872425  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  10872426 atcagggtcataacgtcctttgaaagt 10872452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23104791 - 23104565
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||||||||||||||  |||  || |||||||| ||||||||||||||||||||||| |||||||||||||    
T  23104791 aagtatctacttaggaactccctcctaaacacagcccaagtcacagcagtaccatcttgctctagggtaggtagaagactaacccatcaatcatcagctt 23104692  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| | |||||| ||||||||||| |||||||| || ||| |||||||||| ||||||||||  || ||| |||| |||||||| |||||||||||    
T  23104691 cctcagccaactgatgtgtaccaaatcgcaccttctgaacttcaatgcactgcataacacggaaaactctttctgtctctttaagccacgtctgggctcc 23104592  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  23104591 atcggggtcatatcttcccttgaaagt 23104565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22322409 - 22322183
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||  |||||||||| ||||||  ||||||||| ||||||||||    
T  22322409 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgtccaagggtaggcagaagagcaacccaccagtcatcagctt 22322310  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| ||||||||||||||  ||||||||||    
T  22322309 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacatctgggctcc 22322210  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  22322209 atcagggtcataacgtcctttgaaagt 22322183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24265746 - 24265972
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||| ||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  24265746 aagtatcttctcaagaactccctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 24265845  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | ||| |||||||||| || |||||||||||||| |||||||||||||| || ||||||||    
T  24265846 cctcggctagctgatgagtaccaaaccgcaccttctgatcttcaatgcactgcataacccggaaaatcctctcaatctccttaagccacgtttgggctcc 24265945  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  24265946 atcagggtcataacgtcctttgaaagt 24265972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24713410 - 24713636
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| |||| |||||||||||||| |||||||| || | | |||||||||| ||||||  ||||||||| ||||||||||    
T  24713410 aagtatcttctgaggaactctctcctgaaaacagcccaagtcacaacagctccctcctacccaagggtaggcagaagagcaacccaccagtcatcagctt 24713509  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||||||||||||||| || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  24713510 cctcggccagctgatgagtaccaaatcgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 24713609  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | |||| |||||||    
T  24713610 atcagggtcataacgtcctctgaaagt 24713636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27374645 - 27374871
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | || | |||||||||||| |||||||| || ||| |||||||||||||||||  ||||||||| ||||||||||    
T  27374645 aagtatcttctcaggaactctctcctaaaaatagcccaagtcacaacagctccctcctgcccaagggtaggtagaagagcaacccaccagtcatcagctt 27374744  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  27374745 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 27374844  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | |||| |||||||    
T  27374845 atcagggtcataacgtcctctgaaagt 27374871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 23030140 - 23030366
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  |||||||||| ||  | |||||| ||||||| |||||||| || |||||||| |  |||||||||||||||| |||||||||||||||||    
T  23030140 aagtatctgttcaggaactcccttctaaacacaacccaagtaaccacagcaccgtcttgctctaaagtaggtagaagactaatccaccaatcatcagctt 23030239  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| | |||||| ||||||||||| |||||||| || ||||||||||| || ||||||||||  || |||||||||||||||||  ||||||||||    
T  23030240 cctcagccaactgatgtgtaccaaatcgcaccttctgaacttcagtgcactgtataacacggaaaactctttctatctccttaagccacatctgggctcc 23030339  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||||| |||||||||||| ||||||||    
T  23030340 atcggagtcatatcttcccttgaaagt 23030366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 22742003 - 22741804
Alignment:
Q  28 aacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatc 127  Q
    |||||||||||||| | ||| || || |||||||  |  |||||||||||||||| ||||||||||||||| ||||||||||||  ||| || ||||| |    
T  22742003 aacacagcccaagtaatcacggcaccgtcttgctttaaagtaggtagaagactaatccaccaatcatcagcctcctcagctagcatatgcgttccaaaac 22741904  T
Q  128 gtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | ||||||||||| || ||||| ||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  22741903 gcaccttctggacttcggtgcattgcatcacacggaaaactctctcaatctctttaagccacgtctgggctccatcggggtcatatcttcccttgaaagt 22741804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 22732826 - 22732612
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||||||||||||| |||||| | |  |||||||| | ||||| ||||||||| ||||||||||||||||| |||||| |||||     
T  22732826 aggaactccctcctaaacacagcccaagtaaccacaacacagtcttgctctaaggtagttagaagactcacccaccaatcatcagcctcctcaactagca 22732727  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     |||  | ||||| || ||||||||||| | ||  ||||||||||||||||| |  ||||| ||||| |  ||||| |||||||||||||| ||||||||    
T  22732726 tatgtattccaaaacgcaccttctggactttagaacactgcatcacacggaacactctctccatctcttggagccacgtctgggctccatcagggtcata 22732627  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  22732626 tcttcccttgaaagt 22732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 97 - 227
Target Start/End: Complemental strand, 41606054 - 41605924
Alignment:
Q  97 gcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctggg 196  Q
    |||||||| |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| ||| |||||||||| |||||||    
T  41606054 gcttcctcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataacccggaaaatcctctcaatccccttaagccacgtctggg 41605955  T
Q  197 ctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||||| |||||||| |  |||||||||||    
T  41605954 ctccatcagggtcataacgccctttgaaagt 41605924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 24816846 - 24816677
Alignment:
Q  58 tgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatca 157  Q
    ||||| ||| ||||||||| ||| |||||||| |||||||||||||||||||||   || |||||||| || |||||||| |||||| |||| ||||| |    
T  24816846 tgctctaggataggtagaatactcacccaccagtcatcagcttcctcagctagcatgtgcgtaccaaagcgcaccttctgaacctcattgcattgcataa 24816747  T
Q  158 cacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||||||||||| | ||| || ||||| ||||| ||| |||| || ||||| ||||||||||||||    
T  24816746 ctcggaaaatcctctcaacctctttgagccacgtctgagctacatctggatcataccttcctttgaaagt 24816677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 23065766 - 23065980
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | || |||||||||||||| ||||| || |||||||| |  |||||||||||||| |||||| |||||||||  || |||||||||     
T  23065766 aggaactccctcctaaatacagcccaagtcacaacagcaccatcttgctccaaagtaggtagaagactcacccacaaatcatcagtctcttcagctagca 23065865  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| |  |||||  ||||||| |  |||||||| |||| ||| |  ||||| ||||| || ||||| |||||||||||||| ||||||||    
T  23065866 tgtgcgtaccaaaacacacctttgggacctctgaacactgcattacactgaacactctctcaatctctttgagccacgtctgggctccatcagggtcata 23065965  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  23065966 tcttcccttgaaagt 23065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 23075216 - 23075430
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | || |||||||||||||| ||||| || |||||||| |  |||||||||||||| |||||| |||||||||  || |||||||||     
T  23075216 aggaactccctcctaaatacagcccaagtcacaacagcaccatcttgctccaaagtaggtagaagactcacccacaaatcatcagtctcttcagctagca 23075315  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| |  |||||  ||||||| |  |||||||| |||| ||| |  ||||| ||||| || ||||| |||||||||||||| ||||||||    
T  23075316 tgtgcgtaccaaaacacacctttgggacctctgaacactgcattacactgaacactctctcaatctctttgagccacgtctgggctccatcagggtcata 23075415  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  23075416 tcttcccttgaaagt 23075430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 23039625 - 23039527
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagc 111  Q
    |||||||| ||| | ||||||||||||||||| ||| | || |||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  23039625 aggaactccctcctaaacacagcccaagtcacaacaacaccatcttgctccaaggtaggtagaagactcacccagcaatcatcagcttcctcagctagc 23039527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 28351269 - 28351465
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| |||||||| |||| || || ||||| || |||||||| ||| | ||||||||||| |||||||| ||||| ||||| ||||||| |  ||    
T  28351269 aactctctcctgaacacaacccaggttacaacagcaccatcttgctctaggatgggtagaagactcacccaccagtcatctgcttcttcagctaacatat 28351368  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    | || ||||| || ||||||||  | ||  | ||||||||||| | ||| || ||||| | ||||||||||||  |||| |||||||| ||||||||    
T  28351369 gcgtgccaaaccgcaccttctgtgcttcgctacactgcatcactctgaagattctctcaacctccttaagccacttctgagctccatcagggtcata 28351465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 23274982 - 23275078
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagc 107  Q
    ||||||| || |||||||| ||||||||||||||||||||||| || || || ||   |||||  | ||| |||||||| |||||||||||||||||    
T  23274982 tcaggaattccctcttgaatacagcccaagtcaccacagctccatcctgttccagcacaggtaacaaacttacccaccagtcatcagcttcctcagc 23275078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 19716068 - 19716021
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctc 62  Q
    |||||||||| |||||||||||||||| ||||||||||| || |||||    
T  19716068 gaactctctcctgaacacagcccaagttaccacagctccatcctgctc 19716021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 19720631 - 19720584
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctc 62  Q
    |||||||||| |||||||||||||||| ||||||||||| || |||||    
T  19720631 gaactctctcctgaacacagcccaagttaccacagctccatcctgctc 19720584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 20849040 - 20849158
Alignment:
Q  76 agactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctcta 175  Q
    ||||||| ||||||||||||||| || |||||||||   || || ||||| || ||||| || |||||||  |||||||| || | ||| ||||| || |    
T  20849040 agactaatccaccaatcatcagcctcttcagctagcatgtgcgtcccaaaccgcaccttttgaacctcagaacactgcatgaccctgaatatcctttcaa 20849139  T
Q  176 tctccttaagccatgtctg 194  Q
    ||||||| |||||| ||||    
T  20849140 tctccttcagccatttctg 20849158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 21902033 - 21902142
Alignment:
Q  118 gtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttc 217  Q
    |||||||| || |||||||| || ||| |||| ||||| || | ||| |||||||| | ||| ||||||||  |||| ||||| || || || |||||||    
T  21902033 gtaccaaaacgcaccttctgaacttcactgcattgcatgaccctgaagatcctctccacctctttaagccacttctgagctccgtcaggatcgtatcttc 21902132  T
Q  218 ctttgaaagt 227  Q
    ||||||||||    
T  21902133 ctttgaaagt 21902142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 171896 - 172122
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | |||||||||||||||||  ||| ||| |||||||||||| ||||||  |||||||||||||||||||||||||    
T  171896 aagtatcttctcaggaactctctcctaaacacagcccaagtcacagcagatccatcttgctcaaggttaggtaacagactaacccaccaatcatcagctt 171995  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  171996 cctcagctagctgatgagtaccaaatcgtactttctggaccttagtgcactgcatcacacggaaaatcctatcaatctccttaagccacgtctgggctcc 172095  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  172096 atcggggtcatatcttcccttgaaagt 172122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23414553 - 23414327
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |    
T  23414553 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagcct 23414454  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||| || ||||| |||||||||||    
T  23414453 cctcagctagctgatgagtaccaaatcgtactttctggacctcggtgcactgcatcacacggaaaatcctttcaatctcttttagccacgtctgggctcc 23414354  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    || ||||||||||||||||||||||||    
T  23414353 attggggtcatatcttcctttgaaagt 23414327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16695531 - 16695757
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||| || | |||||||||||||||||||||||    
T  16695531 aagtatcttctcatgaactctctcctgaacacagcccaagtcacaacagctccatcttgctcaaggttaggcagcaaactaacccaccaatcatcagctt 16695630  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||    
T  16695631 cctcagctagctgatgagtaccaaatcgtactttctggacctcggtgcactgcatcacacggaaaatcctctccatctccttaatccaagtctgagctcc 16695730  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
     |||||||||||| | |||||||||||    
T  16695731 gtcggggtcatatatccctttgaaagt 16695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 12890073 - 12890299
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  12890073 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 12890172  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  12890173 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 12890272  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  12890273 atcagggtcataacgtcctttgaaagt 12890299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13249408 - 13249634
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  13249408 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 13249507  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  13249508 cctcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 13249607  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  13249608 atcagggtcataacgtcctttgaaagt 13249634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13256054 - 13256280
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  13256054 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 13256153  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  13256154 cctcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 13256253  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  13256254 atcagggtcataacgtcctttgaaagt 13256280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 15359416 - 15359640
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  15359416 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcttgttcaagggtaggtagaagaccaacccaccagtcatcagctt 15359515  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||   ||||  | ||||| |||||||||||    
T  15359516 cctcagctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacccggaaaatcctcttagtctc--ttagccacgtctgggctcc 15359613  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| ||||||||||||||    
T  15359614 atcagggtcataacttcctttgaaagt 15359640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15586158 - 15585932
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  15586158 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 15586059  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||||||||||||||| || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  15586058 cctcggccagctgatgagtaccaaatcgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 15585959  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  15585958 atcagggtcataacgtcctttgaaagt 15585932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 20058820 - 20058594
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  20058820 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 20058721  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||||||||||||||| || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  20058720 cctcggccagctgatgagtaccaaatcgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 20058621  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  20058620 atcagggtcataacgtcctttgaaagt 20058594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 48428811 - 48429037
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  48428811 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 48428910  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  48428911 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 48429010  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  48429011 atcagggtcataacgtcctttgaaagt 48429037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 3689307 - 3689533
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| || |||||||    
T  3689307 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcgtcagctt 3689406  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  3689407 cttcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctccatctccttaagccacgtctgggctcc 3689506  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  3689507 atcagggtcataacgtcctttgaaagt 3689533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 10909574 - 10909800
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  |||||| || ||||||||||    
T  10909574 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccatcagtcatcagctt 10909673  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | | |||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  10909674 cctcggctagctgatgagtaccaaaccgcaccttctgatcttaagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 10909773  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  10909774 atcagggtcataacgtcctttgaaagt 10909800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 14873348 - 14873122
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||| ||||||||||   ||| || |||||||| |||||||||| ||||||||||||||||||||||||||    
T  14873348 aagtatctgcttaggaactccctcctaaacacaacccaagtcacagtagcaccatcttgctctagggtaggtataagactaacccaccaatcatcagctt 14873249  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| ||||||||||| ||||||||||| |||||||| || |||||||| ||||| ||||| ||||  ||||| |||||||||||||| |||||||||||    
T  14873248 cctcggctagctgatgtgtaccaaatcgcaccttctgaacttcagtgcattgcataacacgaaaaactctctcgatctccttaagccacgtctgggctcc 14873149  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  14873148 atcggggtcatatcttcccttgaaagt 14873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15712822 - 15712596
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | || |||||||||||||| |||| ||| || |||||||||||||| ||||||  ||||||||| ||||||||||    
T  15712822 aagtatcttctcaggaactctctcctaaaaacagcccaagtcacaacagttccctcctgctcaagggtaggcagaagagcaacccaccagtcatcagctt 15712723  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || | |||||||||||| |||||||||||||| |||||||||||    
T  15712722 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccagaaaatcctctcaatctccttaagccacgtctgggctcc 15712623  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  15712622 atcagggtcataacgtcctttgaaagt 15712596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16639137 - 16639363
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  16639137 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 16639236  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16639237 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 16639336  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  16639337 atcagggtcataacgtcctttgaaagt 16639363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 43166039 - 43166265
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  43166039 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 43166138  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  43166139 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 43166238  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  43166239 atcagggtcataacgtcctttgaaagt 43166265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10008964 - 10009187
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  10008964 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 10009063  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | | |||||||||||| || |||||||||||||| | |||||||||||| |||||||||||    
T  10009064 cctcggctagctgatgagtaccaaaccgcaccttctgatctttagtgcactgcataactcggaaaatcctctcaagctccttaagccacgtctgggctcc 10009163  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| |||||||| | |||||||||    
T  10009164 atcagggtcataacgtcctttgaa 10009187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15345011 - 15344800
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  15345011 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 15344912  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||| ||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  15344911 cctcggctatctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 15344812  T
Q  201 atcggggtcata 212  Q
    ||| ||||||||    
T  15344811 atcagggtcata 15344800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5108305 - 5108079
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||| ||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  5108305 aagtatcttctcaggaactctctcctgaaaacagcctaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 5108206  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||| ||||||||||| || || ||||||||||| |||||||||||||| |||||||||||    
T  5108205 cctcggctagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccgaaaaatcctctcaatctccttaagccacgtctgggctcc 5108106  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  5108105 atcagggtcataacgtcctttgaaagt 5108079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 11861720 - 11861945
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||| |||||||||||   |||| || |||||||| ||  |||||||||| ||||||||||||||||||||||    
T  11861720 aagtatcttctcaggaactctctcctgaacatagcccaagtcatagcagcaccatcttgctctagattaggtagaaggctaacccaccaatcatcagctt 11861819  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| ||||| || ||||||||  | || ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||     
T  11861820 cctcagccagctggtgtgtaccaaaa-gcactttctgaacctcagtgcactacatcacacggaaaatcctctcgatctccttaagccacgtctgggctcg 11861918  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||| ||||||||    
T  11861919 atcagggtcatatcttcccttgaaagt 11861945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15399284 - 15399059
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||| ||||||||||    
T  15399284 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcttgtccaagggtaggtagaagaccaacccaccagtcatcagctt 15399185  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| || || || ||  | |||||||||||||| || | ||||||||||||  |||| || ||||| |||||||||||    
T  15399184 cctcagctagctgatgagtaccaaaccgcactttttgatcttcagtgcactgcataac-ccgaaaatcctctcagtctctttcagccacgtctgggctcc 15399086  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  15399085 atcagggtcataacgtcctttgaaagt 15399059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 26790179 - 26789953
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  26790179 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccatcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 26790080  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || ||||| |||||||| |||||||||||||| |||||||||||    
T  26790079 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaacatcctctcaatctccttaagccacgtctgggctcc 26789980  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  26789979 atcagggtcataacgtcctttgaaagt 26789953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16753467 - 16753242
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| | |||||||||||| |||||||| || |||||||||||||| ||||||  ||||||||| ||||||||||    
T  16753467 aagtatcttctcaggaactccctcctgaaaatagcccaagtcacaacagctccctcctgctcaagggtaggcagaagagcaacccaccagtcatcagctt 16753368  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16753367 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 16753268  T
Q  201 atcggggtcatatcttcctttgaaag 226  Q
    ||| |||||||| | |||||||||||    
T  16753267 atcagggtcataacgtcctttgaaag 16753242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5110175 - 5109949
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||| ||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  5110175 aagtatcttctcaggaactctctcctgaaaacagcctaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 5110076  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||| ||||||||||| || || ||||||||||| |||||||||||||| |||| ||||||    
T  5110075 cctcggctagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccgaaaaatcctctcaatctccttaagccacgtctaggctcc 5109976  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  5109975 atcagggtcataacgtcctttgaaagt 5109949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5421696 - 5421470
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| |||||||||||||| |||||||| || || |||||||| || |||| |  ||||||||| ||||||||||    
T  5421696 aagtatcttctcaggaactccctcctgaaaacagcccaagtcacaacagctccctcctgttcaagggttggcagaatagcaacccaccagtcatcagctt 5421597  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  5421596 cctcggctagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 5421497  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  5421496 atcagggtcataacgtcctttgaaagt 5421470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6597419 - 6597644
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| |||||| ||||||| |||||||| |||||| |||||||||| ||||||  ||||||||||||||||||||    
T  6597419 aagtatcttctcaggaactccctcctgaaaacagccaaagtcacaacagctccctcttgcccaagggtaggcagaagagcaacccaccaatcatcagctt 6597518  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || |||||||||||||| || || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  6597519 catcggccagctgatgagtaccgaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 6597618  T
Q  201 atcggggtcatatcttcctttgaaag 226  Q
    ||| |||||||| | |||||||||||    
T  6597619 atcagggtcataacgtcctttgaaag 6597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6604099 - 6604324
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| |||||||||||||| ||||||||  | ||| |||||||||| ||||||  ||||||||||||||||||||    
T  6604099 aagtatcttctcaggaactccctcctgaaaacagcccaagtcacaacagctcccacctgcccaagggtaggcagaagagcaacccaccaatcatcagctt 6604198  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || |||||||||||||| || || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  6604199 catcggccagctgatgagtaccgaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 6604298  T
Q  201 atcggggtcatatcttcctttgaaag 226  Q
    ||| |||||||| | |||||||||||    
T  6604299 atcagggtcataacgtcctttgaaag 6604324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 53381785 - 53381561
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| ||| |||||||||| |||||||| || ||| |||| ||||| ||||||  ||||||| | ||||||||||    
T  53381785 aagtatcttctcaggaactccctcctgaaaacaacccaagtcacaacagctccctcctgcccaagagtaggcagaagagcaacccactagtcatcagctt 53381686  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  53381685 catcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 53381586  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| |||||||| | ||||||||||    
T  53381585 atcagggtcatagcgtcctttgaaa 53381561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 24186554 - 24186731
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||| || ||||||||||| ||||||||| ||||||  | |||||||||||||||||||||||    
T  24186554 aagtatcttctcaggaactctctcctgaacacagcccaagtaacaacagctccttcatgctcaaggttaggtaacaaactaacccaccaatcatcagctt 24186653  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatct 178  Q
    |||| || |||||||| |||||||| || || |||||  | |||||||||||||| ||||||||||||||||| ||||    
T  24186654 cctctgccagctgatgcgtaccaaaccgcactttctgatcttcagtgcactgcataacacggaaaatcctctcaatct 24186731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12502311 - 12502483
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| |||||||| |||||||||| ||||| || |||||||| ||| |||||||||| ||||||||||||||||||||||    
T  12502311 aagtatcttctgaggaactctctcctgaacacaacccaagtcacaacagcaccctcttgctctaggttaggtagaaggctaacccaccaatcatcagctt 12502410  T
Q  101 cctcagctagctgatgagtacc-aaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctct 172  Q
    |||||||||||||||| ||||| ||| || || ||||| |||||||||||||||||||| || ||||||||||    
T  12502411 cctcagctagctgatgtgtaccaaaaacgcactttctgaacctcagtgcactgcatcactcgaaaaatcctct 12502483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 224
Target Start/End: Complemental strand, 14578173 - 14577961
Alignment:
Q  12 caggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagc 111  Q
    ||||||||||||| |||||||||||||| | |||||| | |  |||||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  14578173 caggaactctctcctgaacacagcccaaataaccacaacactatcttgctctagtgtaggtagaagactaacccaccaatcatcagcttccttagctagc 14578074  T
Q  112 tgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcat 211  Q
    ||||| || ||||| || |||||||||||||| |  |||||||| || |  ||||||||||| |||||||| ||||| || || ||| |||| |||||||    
T  14578073 tgatgtgtgccaaaacgcaccttctggacctctgaacactgcatgaccctaaaaatcctctcgatctccttgagccacgtttgagctacatcagggtcat 14577974  T
Q  212 atcttcctttgaa 224  Q
    | |||||||||||    
T  14577973 accttcctttgaa 14577961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 15459174 - 15458967
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| | ||||||||  |||| |||||| | || |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  15459174 aactctctcctaaacacagcataagtaaccacaacaccgtcttgctctaaggtaggtagaagactaatccaccaatcatcagcttcctcagctagcatat 15459075  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
    | ||  |||| || |||||||||||||| |  ||||||||||| ||||||| |||||| ||||| || ||||| |||||||||||||| |||||||||||    
T  15459074 gcgttacaaaacgcaccttctggacctctgaacactgcatcacgcggaaaaccctctcaatctctttgagccacgtctgggctccatcagggtcatatct 15458975  T
Q  216 tcctttga 223  Q
    ||| ||||    
T  15458974 tcccttga 15458967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16803710 - 16803487
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| ||||||||| | ||| ||||||||||||||  || |||| ||||| |||||| ||||||| ||||||||||||||||||||||| |    
T  16803710 aagtatcttctcatgaactctctttagaaaacagcccaagtcacatcaactccatcttgatcaaggttaggtagcagactaacccaccaatcatcagcct 16803611  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||| |||||| ||||| ||||| ||||| || |||||||  || ||||| || | ||||||||  || |  ||||||||||| |||||||| ||    
T  16803610 cctcagctaactgatgcgtaccgaatcgcaccttttgtacctcagaacattgcataactctgaaaatccgttccacttccttaagccacgtctgggcacc 16803511  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||||||||| |||||    
T  16803510 atcggggtcatatcttcccttgaa 16803487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 17498070 - 17498284
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | ||||||||||| || |||||||| || |||||||| | ||||||||| ||||| ||||||| ||||||||||||||| ||||||     
T  17498070 aggaactctctcctaaacacagcccaggtaaccacagcaccgtcttgctctaaggtaggtagcagactcacccaccgatcatcagcttcctcggctagca 17498169  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || |||||||||||||| |  ||||||||||| | ||||| | |||  |||||||| ||||| |||||||||||||| ||||||||    
T  17498170 tatgcgttccaaaacgcaccttctggacctctgaacactgcatcacgcagaaaaccttctaaatctccttgagccacgtctgggctccatcagggtcata 17498269  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  17498270 tcttcccttgaaagt 17498284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 19728138 - 19728352
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||||| || ||||||||||| || || || || |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||     
T  19728138 aggaactctctcttaaatacagcccaagtaacaactgcaccatcttgctctagggtaggtagaagactcacccaccaatcgtcagcttcctcagctagca 19728237  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||| ||| || |||||||| ||||||||||| ||||| || || || |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  19728238 tgtgcgtactaaaacgcaccttctgaacctcagtgcattgcataacccgaaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 19728337  T
Q  213 tcttcctttgaaagt 227  Q
     ||||||||||||||    
T  19728338 ccttcctttgaaagt 19728352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23078773 - 23078547
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| | ||||||| |||||||||  |||| || |||||||| ||||||||||| || |||||||||  |||||||  ||    
T  23078773 aagtatcttcttaggaactctctcctaaacacagtccaagtcacagcagcaccatcttgctctagggtaggtaggaggctaacccacttatcatcaattt 23078674  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||  ||| ||||||||||| ||||| || || || ||||| ||||| || |||| ||  ||||| |||| ||||||||| |||||||||||    
T  23078673 cctcagccagcgaatgtgtaccaaatcgcaccttatgaacttcggtgcattgcataacccggataactctctcgatcttcttaagccacgtctgggctcc 23078574  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  23078573 atcggggtcatatcttcccttgaaagt 23078547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 15066438 - 15066658
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||||| || ||||| ||||  || |||||||| |||||||||||||||||||||||||||||||||||||    
T  15066438 aagtatctgcttaggaactccctcctaaacacagctcatgtcacaacagaaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 15066537  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |  ||||| ||||||||    |||||||| || ||  |||||||||||||||||||||  ||||| ||| |||||||||| ||||| |||||    
T  15066538 cctcagccaaatgatgtgtaccaaa---caccttctgaacttcgatgcactgcatcacacggaaaactctctcaatcaccttaagccacgtctgagctcc 15066634  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| || |||||||| || |||||    
T  15066635 atctggatcatatctccccttgaa 15066658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 15263000 - 15263214
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| ||  | || || |||||||| || ||||||||||||||||  |||||||||||||||||||||||||||     
T  15263000 aggaactctctcctaaacacagcccaagtaacagctgcaccatcttgctctagagtaggtagaagactaattcaccaatcatcagcttcctcagctagca 15263099  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||||||||| ||||| ||| |||| |  ||||| ||||| || ||||| ||||| |||||||| ||||| ||    
T  15263100 tgtgtgtaccaaaacgcaccttctgaacctcagtgcattgcataacatggaacactctctcaatctctttcagccacgtctgagctccatcagggtcgta 15263199  T
Q  213 tcttcctttgaaagt 227  Q
     ||||||||||||||    
T  15263200 ccttcctttgaaagt 15263214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 15263812 - 15264026
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| ||  | || || |||||||| || ||||||||||||||||  |||||||||||||||||||||||||||     
T  15263812 aggaactctctcctaaacacagcccaagtaacagctgcaccatcttgctctagagtaggtagaagactaattcaccaatcatcagcttcctcagctagca 15263911  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||||||||| ||||| ||| |||| |  ||||| ||||| || ||||| ||||| |||||||| ||||| ||    
T  15263912 tgtgtgtaccaaaacgcaccttctgaacctcagtgcattgcataacatggaacactctctcaatctctttcagccacgtctgagctccatcagggtcgta 15264011  T
Q  213 tcttcctttgaaagt 227  Q
     ||||||||||||||    
T  15264012 ccttcctttgaaagt 15264026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 12842862 - 12842648
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || ||| | || |||||||| ||   |||||||||||||| ||||||||||||||||||||||||||||     
T  12842862 aggaactctctcctaaacacagcccaagtaacaacaacaccatcttgctctagaacaggtagaagactaatccaccaatcatcagcttcctcagctagca 12842763  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || || ||||| ||||| || |||| ||| || || || |  ||||| |||||| | ||||| ||||| |||||||| ||||||||    
T  12842762 tgtgcgtaccaaaacgcactttctgaacctctgtacactacataacccgaaacactctctcaatctccatgagccacgtctgagctccatcagggtcata 12842663  T
Q  213 tcttcctttgaaagt 227  Q
    |||||||||||||||    
T  12842662 tcttcctttgaaagt 12842648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 12508307 - 12508091
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    |||||||||||||| | ||||||||||| || || ||  | ||||  ||||| | | ||||| ||| ||||||||||||||||||||||||||| ||||     
T  12508307 tcaggaactctctcctaaacacagcccaggtaacaactccacctttgtgctctaagataggttgaatactaacccaccaatcatcagcttcctctgctaa 12508208  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| |||||| |||| ||||| ||  ||||||| || || | ||| || ||||| ||||| |||||||| ||||||    
T  12508207 catgtgtgtaccaaagcgcaccttctgaacctcattgcattgcatgacctggaaaattctttcaacctctttgagccacgtctgagctccatcagggtca 12508108  T
Q  211 tatcttcctttgaaagt 227  Q
     | ||||||||||||||    
T  12508107 caccttcctttgaaagt 12508091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 2036654 - 2036441
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || ||||| |||||   ||||| |||||| |||||||||||||| || || |||||||     
T  2036654 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcttgttcaagcacaggtaaaagacttacccaccaatcatctgcctcttcagctaa 2036555  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  |||||||||| || ||||||    
T  2036554 catgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctccgtcagggtca 2036455  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  2036454 taccttcctttgaa 2036441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 2040395 - 2040182
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || ||||| |||||   ||||| |||||| |||||||||||||| || || |||||||     
T  2040395 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcttgttcaagcacaggtaaaagacttacccaccaatcatctgcctcttcagctaa 2040296  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  |||||||||| || ||||||    
T  2040295 catgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctccgtcagggtca 2040196  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  2040195 taccttcctttgaa 2040182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 14040133 - 14040346
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || ||||| |||||   ||||| |||||| |||||||||||||| || || |||||||     
T  14040133 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcttgttcaagcacaggtaaaagacttacccaccaatcatctgcctcttcagctaa 14040232  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  |||||||||| || ||||||    
T  14040233 catgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctccgtcagggtca 14040332  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  14040333 taccttcctttgaa 14040346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 17495037 - 17495253
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| |||||||||||||||||||||||||| | || || || ||   |||||  | ||| |||||||| ||||||||||||| |||||     
T  17495037 tcaggaattctctcctgaacacagcccaagtcaccacagcttcgtcctgttccagcacaggtaacaaacttacccaccagtcatcagcttccttagctaa 17495136  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| |||||||| || ||||| |  |||||||| || | ||||||||| || |  |||||||||||  ||||||| ||||| || |||    
T  17495137 catgtgcgtcccaaaccgtaccttttgcacctctgaacactgcatgaccctgaaaatcctttcaacttccttaagccacttctgggcgccatcaggatca 17495236  T
Q  211 tatcttcctttgaaagt 227  Q
    || ||||||||||||||    
T  17495237 taccttcctttgaaagt 17495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 227
Target Start/End: Complemental strand, 13028045 - 13027897
Alignment:
Q  79 ctaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatct 178  Q
    |||||||||||||||||||||||||||||||||   || |||||||| ||||||||||| || ||| |||| ||||| || |||||||  || |||| ||    
T  13028045 ctaacccaccaatcatcagcttcctcagctagcatgtgcgtaccaaaacgtaccttctgaacttcattgcattgcataactcggaaaagtctatctacct 13027946  T
Q  179 ccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | || ||||| |  || |||||||| || ||||| || |||||||||||    
T  13027945 ctttgagccacgattgagctccatctggatcatacctccctttgaaagt 13027897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 16825021 - 16824805
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| | ||||||||||| ||||||||||| || || || |||||    |||| |||||| |||||||| | ||||||||| |||||||     
T  16825021 tcaggaattctctcctaaacacagcccatgtcaccacagcaccatcctgttcaagcacgggtaaaagacttacccaccagttatcagcttcttcagctaa 16824922  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| |||||| |||||| ||| || | |||||||||||| | |||||| |||||  |||| ||||| |  ||||||    
T  16824921 catgtgcgtaccaaaccgcaccttctgtacctcactgcactacatgactctgaaaatcctctcaacctccttgagccacttctgagctccgttagggtca 16824822  T
Q  211 tatcttcctttgaaagt 227  Q
    || || ||||| |||||    
T  16824821 tacctccctttaaaagt 16824805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 14290266 - 14290061
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| ||||||||||||| |||||  |||| || || ||||||||  | ||||  ||||| |||||||| ||||||||||| ||||| |||   || |    
T  14290266 tctctcctgaacacagcccaggtcacagcagcaccatcctgctcaagaatgggtaacagactcacccaccagtcatcagcttcttcagccagcatgtgcg 14290167  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcc 218  Q
    ||||||| || |||||||| |||||| |||| | ||| || | |||||||||||| | ||| || |||||   ||| |||||||| |||||||| || ||    
T  14290166 taccaaaccgcaccttctgaacctcactgcattacatgactctgaaaatcctctcaacctctttgagccactcctgagctccatcagggtcatacctccc 14290067  T
Q  219 tttgaa 224  Q
    ||||||    
T  14290066 tttgaa 14290061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 10416797 - 10416574
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||||||| |||||| ||||||||||||| |||||||| || || ||||| || |    ||||| |||||  |||||||||||||| ||||    
T  10416797 aagtatctattcaggaattctctcctgaacacagcccatgtcaccaccgcgccgtcttgttccaacacaggtaaaagacctacccaccaatcatctgctt 10416698  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||| |||   || || || || || ||||| || |||||||  || ||||| || | ||| |||||||||| |||||| | ||| ||||| |||||    
T  10416697 cttcagccagcatgtgcgtcccgaaccgcaccttttgcacctcagaacattgcatgactctgaagatcctctctacctccttcaaccaggtctgagctcc 10416598  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| |||||||| ||||| |||||    
T  10416597 atcagggtcataccttcccttgaa 10416574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 12181731 - 12181829
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| |||||| |||||||||||||||||||||||||||| || || || ||   |||||  | ||| |||||||| |||||||||||||||||||    
T  12181731 tcaggaattctctcctgaacacagcccaagtcaccacagctccatcctgttccagcacaggtaacacacttacccaccagtcatcagcttcctcagcta 12181829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 35983627 - 35983778
Alignment:
Q  70 ggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcc 169  Q
    |||| |||||| |||||||| ||||||||||| ||||| |||   || |||||||| || ||||| || |||||| |||| ||||| || | ||||||||    
T  35983627 ggtaaaagactcacccaccagtcatcagcttcttcagccagcatgtgcgtaccaaaccgcaccttatgaacctcactgcattgcatgactctgaaaatcc 35983726  T
Q  170 tctctatctccttaagccatgtctgggctccatcggggtcatatcttccttt 221  Q
    |||| | ||| || |||||  |||| |||||||| |||||||| || |||||    
T  35983727 tctcaacctctttgagccacttctgagctccatcagggtcatacctcccttt 35983778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 18131089 - 18130876
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| ||||||||||||||||||||||||||||| || || || || || ||   |||||  || || | |||||| |||||||||||||||||||     
T  18131089 tcaggaaatctctcttgaacacagcccaagtcaccaccgcaccgtcctgttccagcacaggtaacagtcttagccaccagtcatcagcttcctcagctaa 18130990  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || || || || |||||||| ||||| |  |||||||| || | ||| ||||| || |  |||||||||||  ||||||| || || || |||    
T  18130989 catttgcgttccgaaccgcaccttctgcacctctgaacactgcatgaccctgaagatcctttcaacttccttaagccacttctgggccccgtcaggatca 18130890  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  18130889 taccttcctttgaa 18130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2245424 - 2245372
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctcc 53  Q
    ||||| || ||||||||||||||| |||||||||||||||| ||| |||||||    
T  2245424 aagtacctactcaggaactctctcctgaacacagcccaagttaccgcagctcc 2245372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 12357269 - 12357227
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctcc 53  Q
    ||||||| |||||| |||| |||||||||||||||||||||||    
T  12357269 tcaggaattctctcctgaatacagcccaagtcaccacagctcc 12357227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 24190857 - 24190903
Alignment:
Q  178 tccttaagccatgtctgggctccatcggggtcatatcttcctttgaa 224  Q
    ||||||||||| |||||||| |||||||||||||| ||||| |||||    
T  24190857 tccttaagccacgtctgggcaccatcggggtcataccttcccttgaa 24190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 28757777 - 28757883
Alignment:
Q  82 acccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctcct 181  Q
    ||||||||||||||||| ||||||||||||   || || ||||| || |||||||| ||||| |  |||||||| || | ||||||||| || || ||||    
T  28757777 acccaccaatcatcagcctcctcagctagcatgtgcgtcccaaaccgcaccttctgaacctcggaacactgcatgaccctgaaaatcctttcaatttcct 28757876  T
Q  182 taagcca 188  Q
    | |||||    
T  28757877 tcagcca 28757883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 12273137 - 12273345
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| ||||||||||| | ||||||||||  || || || |||||   |||||  ||||| |||||||| ||||||||||| ||||||| |   || |    
T  12273137 tctctcctgaacacagccaaggtcaccacagaaccatcctgttcaagcacaggtaacagacttacccaccagtcatcagcttcttcagctaacatgtgcg 12273236  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcc 218  Q
    | ||||| || |||||||| || ||| |||| | ||| || | ||||||  |||| | |||||| ||| |  |||| ||||| || ||||||||||| ||    
T  12273237 tcccaaaccgcaccttctgcacttcactgcattacatgactctgaaaattttctcaacctccttgagctacttctgagctccgtcagggtcatatctccc 12273336  T
Q  219 tttgaaagt 227  Q
    ||| |||||    
T  12273337 tttaaaagt 12273345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 13557 - 13334
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||| |||| |||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  13557 aagtatcttctcaggaactctctcctgaacacaacccatgtcaccaccgctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagctt 13458  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||| ||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  13457 cctcagctagcttatgcgtaccgaatcgcactttctggacctcagtgcactgcatcacacggaaaatcctctctatctctttaagccacgtctgggctcc 13358  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  13357 atcagggtcatatcttcctttgaa 13334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 160; Significance: 2e-85; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 55778 - 56001
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  55778 aagtatctcctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcttgctcaagggtaggcagcagactaacccaccaatcatcagctt 55877  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||| ||||| || |||||  ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  55878 cctcagctagctgatgagtaccgaatcgcactttctgatcctcagtgcactgcatcacacggaagatcctctctatctctttaagccacgtctgggctcc 55977  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||| || |||||    
T  55978 atccgggtcatatctccccttgaa 56001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 21754 - 21980
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||| | ||||||||| |||||| |||    
T  21754 aagtatcttctcaggaactctctcctgaacacagcccaggtcacaacagctccttcttgcccaagggtaggtagaaggccaacccaccagtcatcaactt 21853  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||||||  | || |||||  |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||     
T  21854 cctcagctagctgatgagtaccaaactgcactttctgatcctcagtgcactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctcg 21953  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  21954 atcagggtcatatcttcctttgaaagt 21980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 12226 - 12452
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||| || ||||||||||||| | ||||||||| |||||| |||    
T  12226 aagtatcttctcaggaactctctcctgaacacagcccaggtcacaacagctccttcttgcccatgggtaggtagaaggccaacccaccagtcatcaactt 12325  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||| ||||  | || |||||  |||||||||||| ||| ||||||||||||||||| ||||| |||||||| |||||||||||    
T  12326 cctcagctagctgatgagtatcaaactgcactttctgatcctcagtgcactacataacacggaaaatcctctcaatctctttaagccacgtctgggctcc 12425  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  12426 atcagggtcatatcttcctttgaaagt 12452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 31 - 225
Target Start/End: Original strand, 114 - 308
Alignment:
Q  31 acagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgta 130  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  114 acagcccaagtaacaacagctccttcttgctcaagggtaggtaaaagactaacccaccagtcatcagcttcctcagctagctgatgagtaccaaatcgca 213  T
Q  131 ccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaa 225  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  214 ccttctggacctcagtgcactacatcacccggaaaatcctctctatctccttaagccacgtctgggctccatcagggtcatatcttcctttgaaa 308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 156; Significance: 5e-83; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17937 - 18160
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||| |||||||||||||||||||||||||    
T  17937 aagtatcttctcaagaactctctcctgaacacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagctt 18036  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||  ||||| || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  18037 cctcagctagctgatgcgtacggaatcgcactttctggacctcagtgcactgcatcacatggaaaatcctctcaatctccttaagccacgtctgggctcc 18136  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  18137 atcagggtcatatcttcctttgaa 18160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 4198 - 4352
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||  |||||||||| ||||||  ||||||| | ||||||||||    
T  4198 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgtccaagggtaggcagaagagcaacccactagtcatcagctt 4297  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcat 155  Q
    |||| |||||||||||||||||||| || || |||||  |||| |||||||||||    
T  4298 cctcggctagctgatgagtaccaaaccgcactttctgatcctcggtgcactgcat 4352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 6928 - 6995
Alignment:
Q  160 cggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||||||   ||||||||||||    
T  6928 cggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcataatgtcctttgaaagt 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 156; Significance: 5e-83; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 15201 - 15424
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| ||| ||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |    
T  15201 aagtatcttctcaggaactctctcctgaaaacaacccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagcat 15300  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
     |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||    
T  15301 actcagctagctgatgagtaccaaatcgtactttctggacctcggtgcactgcatcacacggaaaatcctctcaatctctttaagccacgtttgggctcc 15400  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||||||||||||||||||||||||    
T  15401 atcggggtcatatcttcctttgaa 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 47 - 224
Target Start/End: Original strand, 22011 - 22188
Alignment:
Q  47 cagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagt 146  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||    
T  22011 cagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagctttctcagctagctgatgagtaccaaatcgtactttctggacctcggt 22110  T
Q  147 gcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaa 224  Q
    ||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  22111 gcactgcatcacacggaaaatcctctcaatctctttaagccacgtttgggctccatcggggtcatatcttcctttgaa 22188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 5704 - 5915
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| || || || || |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||     
T  5704 aggaactctctcctaaacacaacccaagtaacaactgcaccatcttgctctaggataggtagaagactcacccaccaatcatcagcttcctcagctagca 5803  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||||||||| ||||| ||| |||| |  ||||| ||||| || ||||| || || ||||||||  | |||||    
T  5804 tgtgcgtaccaaaacgcaccttctgaacctcagtgcattgcataacatggaacactctctcaatctctttgagccacgtatgagctccatcaagatcata 5903  T
Q  213 tcttcctttgaa 224  Q
     |||||||||||    
T  5904 ccttcctttgaa 5915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 180366 - 180143
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||||||| |||||| ||||||||| ||| ||||| || ||||| ||||| || |    |||||  ||||  |||||||||||||| ||||    
T  180366 aagtatctattcaggaattctctcctgaacacagtccatgtcactactgctccgtcttgttccaacacaggtaacagacctacccaccaatcatccgctt 180267  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||| |||   || || || || || ||||| || ||||||| ||| ||||| || | ||| ||||||||||  ||||| | ||| ||||| |||||    
T  180266 cttcagccagcatgtgcgtcccgaaccgcaccttttgtacctcagagcattgcatgactctgaagatcctctctacttccttcaaccaggtctgagctcc 180167  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||| ||||| |||||    
T  180166 atcggggtcataccttcccttgaa 180143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 38852 - 38754
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| |||||| |||| ||||||||||||||| ||||||| || ||||| ||   |||||  | ||| |||||||| |||||  ||||||||||||    
T  38852 tcaggaattctctcctgaatacagcccaagtcaccgcagctccatcatgctccagcacaggtaacaaacttacccaccagtcatcgacttcctcagcta 38754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18782794 - 18783020
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| ||||||||||  ||||||||||||||||||  ||||||| |||||||||||| ||||||| |||||||||| ||| ||||||||||    
T  18782794 aagtatcttctcaagaactctctccagaacacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaaccctccagtcatcagctt 18782893  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  18782894 cctcagctagctggtgaataccaaatcgtactttctggacctcggtgcactgcatcacacggaaaatcctctcaatctctttaagccacgtctgggctcc 18782993  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||||    
T  18782994 atcggggtcatatcttcctttgaaagt 18783020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 23536921 - 23536695
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||||| |    
T  23536921 aagtatcttctcaggaactctctcctgaacacagcccaagtcacaacagctccatcttgctcaaggttaggtagcagactaacccaccaatcatcagcat 23536822  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||  |||| ||||  || ||||| |||| |||||||| |||||||| |||||||||||| |||||||||||||| |||||||||||    
T  23536821 cctcagctagctgatgcataccgaatcacactttctgaacctaagtgcactacatcacacagaaaatcctctcaatctccttaagccacgtctgggctcc 23536722  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  23536721 atcagggtcatatcttcctttgaaagt 23536695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 20804277 - 20804501
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  |||| || |||||||| ||| |||||||||| ||||||||||||||||||||||    
T  20804277 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagcaccgtcttgctctaggttaggtagaaggctaacccaccaatcatcagctt 20804376  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||| ||||| |||||||| || || ||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||| || ||||||||    
T  20804377 cctcagctagttgatgtgtaccaaaacgcactttctgaacctcagtgcactacataacacggaaaatcctctcgatctccttaagccacgtatgggctcc 20804476  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| ||||||||||| || ||||||    
T  20804477 atcagggtcatatctacccttgaaa 20804501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 23461584 - 23461808
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||  |||| || |||||||| |||||||||||||| ||||||||||||||||||||||    
T  23461584 aagtatcttctcaggaactccctcctgaacacagcccaagtcacagcagcaccctcttgctctagggtaggtagaaggctaacccaccaatcatcagctt 23461683  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| ||||| || |||||||| || || ||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||||| | |||||||||    
T  23461684 cctcagccagctgttgtgtaccaaaacgcactttctgaacctcagtgcactgcataacatggaaaatcctctcgatctccttaagccacgcctgggctcc 23461783  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| ||||| |||||||||||||||    
T  23461784 atcagggtcgtatcttcctttgaaa 23461808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 14996448 - 14996222
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| |||||| |||||||||| ||||||||||    
T  14996448 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagtaacccaccagtcatcagctt 14996349  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| ||||||||||||||||||||  | ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  14996348 cctcggctagctgatgagtaccaaactgcaccttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 14996249  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  14996248 atcagggtcataacgtcctttgaaagt 14996222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22351596 - 22351822
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| || |||||||| ||| |||||||||| ||||||| ||||||||| ||||||||||    
T  22351596 aagtatctcctcaagaactctctcctgaacacagcccaagtcacaacggctccttcctgcccaagggtaggcagaagaccaacccaccagtcatcagctt 22351695  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||| || || || || |||||  ||| |||||||||||| || |||||||||||||| ||||| |||||||| |||||||||||    
T  22351696 cctcagctagctgatgagtgccgaaccgcactttctgatccttagtgcactgcataacccggaaaatcctctcaatctctttaagccacgtctgggctcc 22351795  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||| ||||||||||||    
T  22351796 atcagggtcatatcgtcctttgaaagt 22351822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22329596 - 22329370
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| | ||||  ||||||||| ||||||||||    
T  22329596 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcaaaagagcaacccaccagtcatcagctt 22329497  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  22329496 cctcggctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 22329397  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  22329396 atcagggtcataacgtcctttgaaagt 22329370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27522083 - 27522309
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  27522083 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 27522182  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  27522183 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 27522282  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  27522283 atcagggtcataacgtcctttgaaagt 27522309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27682109 - 27681883
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | || |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  27682109 aagtatcttctcaggaactctctcctaaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 27682010  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  27682009 cctcggctagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 27681910  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  27681909 atcagggtcataacgtcctttgaaagt 27681883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 37288205 - 37287979
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||| ||||| ||||||||||    
T  37288205 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaactcaccagtcatcagctt 37288106  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||| ||||||||||||||| || ||||||||  |||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  37288105 cctcggctaactgatgagtaccaaaccgcaccttctgatcctcagtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 37288006  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  37288005 atcagggtcataacgtcctttgaaagt 37287979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 41774520 - 41774746
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  41774520 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 41774619  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| ||||||||||||||||||||||| || |||||  |||| ||||||||||| || |||||||||||||| ||||||| |||||| |||||||||||    
T  41774620 cctcggctagctgatgagtaccaaatcgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctcctgaagccacgtctgggctcc 41774719  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  41774720 atcagggtcataacgtcctttgaaagt 41774746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 40712457 - 40712681
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||| |||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  40712457 aagtatcttctcaggaactctctcctgaaaacagcccaagtcaccacagcttcttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 40712556  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  40712557 cctcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 40712656  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| |||||||| | ||||||||||    
T  40712657 atcagggtcataacgtcctttgaaa 40712681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16360179 - 16360405
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  16360179 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 16360278  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16360279 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 16360378  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  16360379 atcagggtcataacgtcctttgaaagt 16360405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22138345 - 22138571
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  22138345 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 22138444  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| ||||||||||||||||||||  | || |||||  |||||||||||||||| || |||||||| ||||| |||||||||||||| |||||||||||    
T  22138445 cctcggctagctgatgagtaccaaactgcactttctgatcctcagtgcactgcataacccggaaaattctctcaatctccttaagccacgtctgggctcc 22138544  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  22138545 atcagggtcataacgtcctttgaaagt 22138571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27614033 - 27614259
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  27614033 aagtatcttctcaggaactctctcctgaaaacaacccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 27614132  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  27614133 cctcggctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 27614232  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  27614233 atcagggtcataacgtcctttgaaagt 27614259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 29472782 - 29472556
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  29472782 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 29472683  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||| ||||||| || || |||||  |||||||||||||||| || || ||||||||||| |||||||||||||| |||||||||||    
T  29472682 cctcggctagctgatgaataccaaaccgcactttctgatcctcagtgcactgcataacccgaaaaatcctctcaatctccttaagccacgtctgggctcc 29472583  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  29472582 atcagggtcataacgtcctttgaaagt 29472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 34570171 - 34570397
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  34570171 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 34570270  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  34570271 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 34570370  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  34570371 atcagggtcataacgtcctttgaaagt 34570397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19773637 - 19773863
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||| |||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  19773637 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacaactccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 19773736  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| ||||||||||||||||| || || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  19773737 cctcggctagctgatgagtaccgaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 19773836  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  19773837 atcagggtcataacgtcctttgaaagt 19773863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 21883469 - 21883683
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| ||||| || |||||||| |  ||||||||||| |||| |||||||||||||||||||||||| ||||    
T  21883469 aggaactccctcctaaacacagcccaagtcacaacagcaccgtcttgctccaacgtaggtagaaggctaatccaccaatcatcagcttcctcagccagct 21883568  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    ||||||||||||| || |||||||| || || ||||||||||||||| ||||||  ||||| || ||||||||||| |||||||||||||| ||||||||    
T  21883569 gatgagtaccaaaacgcaccttctgaacttcggtgcactgcatcacaaggaaaactctctcaatatccttaagccacgtctgggctccatcagggtcata 21883668  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  21883669 tcttcccttgaaagt 21883683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 27665212 - 27664986
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||| ||||    
T  27665212 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcggctt 27665113  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  |||| ||||||||||| |  | |||||||||||| |||||||||||||| |||||||||||    
T  27665112 cctcggctagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataatccagaaaatcctctcaatctccttaagccacgtctgggctcc 27665013  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  27665012 atcagggtcataacgtcctttgaaagt 27664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 21331683 - 21331472
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||||| |||| | |||||||||| ||| || ||| | || |||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||     
T  21331683 aggaactatctcctaaacacagcccgagtaacaacaacgccatcttgctctagggtaggtaaaagactcacccaccaatcatcagcttcctcagctagca 21331584  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||||||||||||||| || ||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  21331583 tgtgcgtaccaaaacgcaccttctgcacctcagtgcactgcataacccggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 21331484  T
Q  213 tcttcctttgaa 224  Q
    ||||||||||||    
T  21331483 tcttcctttgaa 21331472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 25430112 - 25430326
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| ||||| || |||||||| |  ||| |||||||||| ||||||||||||||||| || |||||||||     
T  25430112 aggaactccctcctaaacacagcccaagtcacaacagcaccatcttgctccaaagtaagtagaagactcacccaccaatcatcagcctcttcagctagca 25430211  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||||||||| |  |||||||| |||||||| |  ||||| ||||| || ||||| |||||||||||||| |||| |||    
T  25430212 tgtgcgtaccaaaacgcaccttctggacctctgaacactgcattacacggaacactctctcaatctctttgagccacgtctgggctccatcagggtaata 25430311  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  25430312 tcttcccttgaaagt 25430326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 23474886 - 23475100
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || || || || |||||||  ||||||||||||||||| ||||||||||||||| |||  |||||||||     
T  23474886 aggaactctctcctaaacacagcccaagtaacaactgcaccatcttgctttagggtaggtagaagactcacccaccaatcatcaactttttcagctagca 23474985  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| || |||||||| ||||| |||||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  23474986 tgtgcgtaccaaaacgcaccttctgaacatcagtgcattgcataacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 23475085  T
Q  213 tcttcctttgaaagt 227  Q
     |||||||| |||||    
T  23475086 ccttcctttcaaagt 23475100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 26735485 - 26735340
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || ||||| || ||||||   |  |||||||||||||||| | ||||||||||||||||||||||||||     
T  26735485 aggaactctctcctaaacacagcccaagtaacaacagcaccatcttgccttaaagtaggtagaagactaatctaccaatcatcagcttcctcagctagca 26735386  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcac 158  Q
      || |||||||| || |||||||| ||||||||||||||||||||    
T  26735385 tgtgcgtaccaaaacgcaccttctgaacctcagtgcactgcatcac 26735340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 23529056 - 23529164
Alignment:
Q  103 tcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccat 202  Q
    ||||| |||||||| ||||||||||| |||||||| || |||||||| ||||| ||||||||||  ||||| |||||||||||||| |||||||||||||    
T  23529056 tcagccagctgatgtgtaccaaatcgcaccttctgaacttcagtgcattgcataacacggaaaacactctcgatctccttaagccacgtctgggctccat 23529155  T
Q  203 cggggtcat 211  Q
    |||||||||    
T  23529156 cggggtcat 23529164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 16257732 - 16257519
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || ||||| |||||  |||||| |||||| | |||||||||||| || || |||||||     
T  16257732 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcttgttcaagcataggtaaaagacttatccaccaatcatctgcctcttcagctaa 16257633  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  |||||||||| || ||||||    
T  16257632 catgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctccgtcagggtca 16257533  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  16257532 taccttcctttgaa 16257519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23526731 - 23526838
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | ||||||||||||||||   |||| || |||||||| ||||||||  |||||||||||||||| ||||||||||    
T  23526731 aagtatcttcttaggaactccctcctaaacacagcccaagtcagagcagcaccatcttgctctagggtaggctgaagactaacccaccagtcatcagctt 23526830  T
Q  101 cctcagct 108  Q
    ||||||||    
T  23526831 cctcagct 23526838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 28891648 - 28891425
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||||||| |||||| ||||||||| ||| |||||||| ||||| ||||| || |    ||||| |||||  |||||||||||||| ||||    
T  28891648 aagtatctattcaggaattctctcctgaacacagtccatgtcaccaccgctccgtcttgttccaacacaggtaaaagacctacccaccaatcatctgctt 28891549  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||   || || || || || ||||| || ||||||| ||| ||||| || | ||| ||||||||||  ||||| | ||| ||||| |||||    
T  28891548 cctcagccagcatgtgcgtcccgaaccgcaccttttgcacctcagagcattgcatgaccctgaagatcctctctacttccttcaaccaggtctgagctcc 28891449  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||| ||||| |||||    
T  28891448 atcggggtcataccttcccttgaa 28891425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 22591451 - 22591238
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || ||||| |||||   ||||| |||||| | |||||||||||| || || |||||||     
T  22591451 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcttgttcaagcacaggtaaaagacttatccaccaatcatctgcctcttcagctaa 22591352  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  |||||||||| || ||||||    
T  22591351 catgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctccgtcagggtca 22591252  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  22591251 taccttcctttgaa 22591238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 22595006 - 22594793
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || ||||| |||||   ||||| |||||| | |||||||||||| || || |||||||     
T  22595006 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcttgttcaagcacaggtaaaagacttatccaccaatcatctgcctcttcagctaa 22594907  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  |||||||||| || ||||||    
T  22594906 catgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctccgtcagggtca 22594807  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  22594806 taccttcctttgaa 22594793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20779575 - 20779798
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||||||| |||||| ||||||||| ||| |||||||| ||||| ||||| || |    ||||| |||||  ||||||||||| || ||||    
T  20779575 aagtatctattcaggaattctctcctgaacacagtccatgtcaccaccgctccgtcttgttccaacacaggtaaaagacctacccaccaatcgtctgctt 20779674  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||| |||   || || || ||||| ||||| || ||||||| ||| ||||| || | ||| ||||||||||  ||||| | ||| ||||| |||||    
T  20779675 cttcagccagcatgtgcgtcccgaatcgcaccttttgcacctcagagcattgcatgactctgaagatcctctctacttccttcaaccaggtctgagctcc 20779774  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||| ||||| |||||    
T  20779775 atcggggtcataccttcccttgaa 20779798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 28911494 - 28911283
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||| ||| |||||| ||||||||| ||| |||||||| ||||| ||||| || |    ||||| |||||  |||||||||||||| ||||    
T  28911494 aagtatctattcaagaattctctcctgaacacagtccatgtcaccaccgctccgtcttgttccaacacaggtaaaagacctacccaccaatcatctgctt 28911395  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||   || || || || || ||||| || ||||||| ||| ||||| || | ||| ||||||||||| ||||| | ||| ||||| |||||    
T  28911394 cctcagccagcatgtgcgtcccgaaccgcaccttttgcacctcagagcattgcatgaccctgaagatcctctctatttccttcaaccaggtctgagctcc 28911295  T
Q  201 atcggggtcata 212  Q
    ||||||||||||    
T  28911294 atcggggtcata 28911283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 28926762 - 28926551
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||| ||| |||||| ||||||||| ||| |||||||| ||||| ||||| || |    ||||| |||||  |||||||||||||| ||||    
T  28926762 aagtatctattcaagaattctctcctgaacacagtccatgtcaccaccgctccgtcttgttccaacacaggtaaaagacctacccaccaatcatctgctt 28926663  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||   || || || || || ||||| || ||||||| ||| ||||| || | ||| ||||||||||| ||||| | ||| ||||| |||||    
T  28926662 cctcagccagcatgtgcgtcccgaaccgcaccttttgcacctcagagcattgcatgaccctgaagatcctctctatttccttcaaccaggtctgagctcc 28926563  T
Q  201 atcggggtcata 212  Q
    ||||||||||||    
T  28926562 atcggggtcata 28926551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 21869974 - 21869812
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||| ||||| || ||||  |||||  | |||| |||||| |||||||| ||||||||||| |||||||     
T  21869974 tcaggaattctctcatgaacacagcccaggtcacaacagcaccatcttattcaagcatgggtaaaagactcacccaccagtcatcagcttcttcagctaa 21869875  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctc 173  Q
    |   || |||||||| || |||||||| |||||| |||| ||||| || |  |||||||||||    
T  21869874 cacgtgcgtaccaaaccgcaccttctgtacctcattgcattgcatgactctaaaaatcctctc 21869812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 21874254 - 21874092
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||| ||||| || ||||  |||||  | |||| |||||| |||||||| ||||||||||| |||||||     
T  21874254 tcaggaattctctcatgaacacagcccaggtcacaacagcaccatcttattcaagcatgggtaaaagactcacccaccagtcatcagcttcttcagctaa 21874155  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctc 173  Q
    |   || |||||||| || |||||||| |||||| |||| ||||| || |  |||||||||||    
T  21874154 cacgtgcgtaccaaaccgcaccttctgtacctcattgcattgcatgactctaaaaatcctctc 21874092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 224
Target Start/End: Original strand, 22465693 - 22465835
Alignment:
Q  82 acccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctcct 181  Q
    |||||||||||||| || |||||||| |||   || || || || || || || || ||||||| ||||||||| || | ||| ||||||||||  ||||    
T  22465693 acccaccaatcatctgcctcctcagccagcatgtgtgtcccgaaccgcactttttgcacctcagagcactgcatgactctgaagatcctctctacttcct 22465792  T
Q  182 taagccatgtctgggctccatcggggtcatatcttcctttgaa 224  Q
    | ||||||||||||||||||||||||||||| ||||| |||||    
T  22465793 tcagccatgtctgggctccatcggggtcataccttcccttgaa 22465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 23562865 - 23562652
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || || || |||||   ||| |  ||||| | |||||| |||||||||||||||||||     
T  23562865 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcctgttcaagcacaggaaacagacttagccaccagtcatcagcttcctcagctaa 23562766  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| || ||||| || ||||| |  |||||||| || | ||||||||| || |  |||||||||||  ||||||| ||||| || |||    
T  23562765 catgtgcgtcccaaaccgcaccttttgcacctctgaacactgcatgactctgaaaatcctttcaacttccttaagccacttctgggcgccatcaggatca 23562666  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  23562665 taccttcctttgaa 23562652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20770800 - 20771023
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||||||| |||||| ||||||||| ||| |||||||| ||||| ||||| || |    ||||| |||||  ||||||||||| || ||||    
T  20770800 aagtatctattcaggaattctctcctgaacacagtccatgtcaccaccgctccgtcttgttccaacacaggtaaaagacctacccaccaatcgtctgctt 20770899  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||| |||   || || || || || ||||| || ||||||| ||| ||||| || | ||| ||||||||||  ||||| | ||| ||||| |||||    
T  20770900 cttcagccagcatgtgcgtcccgaaccgcaccttttgcacctcagagcattgcatgactctgaagatcctctctacttccttcaaccaggtctgagctcc 20770999  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||| ||||| |||||    
T  20771000 atcggggtcataccttcccttgaa 20771023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20825115 - 20825338
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||| ||| || ||| ||||||||||||| |||||||| || || ||||| || |     |||| |||||  |||||||||||||| ||||    
T  20825115 aagtatctattcaagaattccctcctgaacacagcccatgtcaccaccgcaccgtcttgttccaacacgggtaaaagacctacccaccaatcatctgctt 20825214  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | ||||| |||   || || || || || ||||| || ||||||| ||| ||||| || | ||| ||||||||||  ||||| | ||| ||||| |||||    
T  20825215 cttcagccagcatgtgcgtcccgaaccgcaccttttgcacctcagagcattgcatgactctgaagatcctctctacttccttcaaccaggtctgagctcc 20825314  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||| ||||| |||||    
T  20825315 atcggggtcataccttcccttgaa 20825338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 26734032 - 26733974
Alignment:
Q  169 ctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||| ||||| || ||||| ||||| |||||||| ||||||||||||||||| |||||    
T  26734032 ctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcctttaaaagt 26733974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14568 - 14345
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||    
T  14568 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccagtcatcagctt 14469  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  14468 cctcagctagctgatgcgtaccgaatcgcactttctgaacctcagtgcactgcatcacacggaaaatcctctcgatctccttaagccacgtctaggctcc 14369  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||| ||||||||||||    
T  14368 atcagggtcatgtcttcctttgaa 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10883 - 10818
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagg 66  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||    
T  10883 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagctccatcttgctcaagg 10818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 11141 - 11367
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||| | ||||||||||||| ||||| ||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||    
T  11141 aagtatcttctcaggaactctcccctgaacacagcccaggtcacaacagctccttcttgcccaagggtaggtagaaggccaacccaccagtcatcagctt 11240  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| ||||| |||||  | |||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||    
T  11241 cctcagctagctgatgagtaccaaaccgtactttctgatcttcagtgcactgcataacacggaaaatcctctcaatctctttaagccacgtctgggctcc 11340  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||||||||||||    
T  11341 atcagggtcatatcttcctttgaaagt 11367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 296 - 74
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  296 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagcaccttcttgctctagggtaggtagaaggctaacccaccaatcatcagctt 197  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||| ||||| ||||| ||||| || |||| |||| |  |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  196 cctcagctagttgatgtgtaccgaatcgcactttct-gacccccatgcactgcatcacacggaaaatcctctcgatctccttaagccacgtctgggctcc 98  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  97 atcagggtcatatcttcctttgaa 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 144; Significance: 7e-76; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 49439 - 49662
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  49439 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcttgctcaagggtaggcagcagattaacccaccaatcatcagctt 49538  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||| ||||  || || ||  |||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  49539 cctcagctagctgatgagtaccgaatcacactttttgatcctcggtgcactgcatcacacggaagatcctctctatctctttaagccacgtctgggctcc 49638  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| |||||||||||||| |||||    
T  49639 atccgggtcatatcttcccttgaa 49662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 162523 - 162311
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || |  || || || ||||| || |||||||||||||||| |||||||||||||||||||||||| | ||    
T  162523 aggaactctctcctaaacacagcccaagtaacaatcgcgccatcctgctctagagtaggtagaagactaatccaccaatcatcagcttcctcagccaact 162424  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    |||| ||||||||||| |||||||| || ||| |||| ||||| ||||||||||  || || |||||||| ||||| ||||| |||||  |  | |||||    
T  162423 gatgtgtaccaaatcgcaccttctgaacttcaatgcattgcataacacggaaaactctttcaatctccttcagccacgtctgtgctccgcctagatcata 162324  T
Q  213 tcttcctttgaaa 225  Q
     ||||||||||||    
T  162323 ccttcctttgaaa 162311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15115 - 14891
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||  |||| || |||||||| ||| |||||||||| ||| ||||||||||||| ||||    
T  15115 aagtatcttctcaggaactctctcctgaacacatcccaagtcacagcagcaccatcttgctctaggttaggtagaaggctatcccaccaatcatcggctt 15016  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  15015 cctcagccagctgatgtgtaccaaatcgcactttctgaacctcaatgcactgcatcacacggaaaatcctctcgatctccttaagccacgtctgggctcc 14916  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    |||||||||||||||||| ||||||    
T  14915 atcggggtcatatcttcccttgaaa 14891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5775 - 5994
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||||||| |||||    
T  5775 aagtatcttctcaggaactctctcctgaacacagtccaagtcacagcagctccatcttgctcaaggttaggtagcagactaacccaccaatcattagctt 5874  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||||||||| ||||| || ||||| || |||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  5875 cctcagctagctgatgagtaccgaatcgcactttctgaacttcagtgcactgcatcacacggaaaatcctctcaatct-tttaagccacgtctgggctcc 5973  T
Q  201 atcggggtcatatcttccttt 221  Q
    || ||||||||||||||||||    
T  5974 attggggtcatatcttccttt 5994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 208 - 431
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||| | |||||||||||||||||||  |||| || |||||||||||| |||||||||| ||||||||||||||||| ||||    
T  208 aagtatcttctcaggaactctcgcctgaacacagcccaagtcacagcagcaccatcttgctcaaggttaggtagaaggctaacccaccaatcatcggctt 307  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||    
T  308 cctcagccagctgatgtgtaccaaatcgcactttctgaacctcagtgcactgcatcacacggaaaatcctctcgatctccttaagccacatatgggctcc 407  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| |||||||||||||| |||||    
T  408 atcagggtcatatcttcccttgaa 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 7e-73; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 21765424 - 21765650
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||  |||| || |||||||  ||| |||||||||| ||||||||||||||||||||||    
T  21765424 aagtatcttctcaggaacgctctcctgaacacaacccaagtcacagcagcaccatcttgctttaggttaggtagaaggctaacccaccaatcatcagctt 21765523  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| |||||||| || || ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  21765524 cctcagccagctgatgtgtaccaaaacgcactttctgaacctcagtgcactgcataacacggaaaatcctctcgatctccttaagccacgtctgggctcc 21765623  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  21765624 atcggggtcatatcttcccttgaaagt 21765650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 25756279 - 25756056
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  |||| |||||||| || ||| |||| ||||| ||||||||||||||||||||||    
T  25756279 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcagcaccttcttgttctaggttaggcagaaggctaacccaccaatcatcagctt 25756180  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||| |||||||||| ||||| ||||| || ||||| || |||||||||||||||||||||||||||||||| ||||| || |||||  ||||||||||    
T  25756179 cctcatctagctgatgcgtaccgaatcgcactttctgaacttcagtgcactgcatcacacggaaaatcctctcaatctctttgagccacatctgggctcc 25756080  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||||||||||||||||||||||||    
T  25756079 atcggggtcatatcttcctttgaa 25756056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 10 - 224
Target Start/End: Complemental strand, 27558476 - 27558262
Alignment:
Q  10 ctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||||||||||| | |||||||||||||||||   ||| || |||||||| ||| ||||| |||| |||||||||||||||||||||||||||||||    
T  27558476 ctcaggaactctctcctaaacacagcccaagtcacagtagcaccgtcttgctctaggttaggttgaaggctaacccaccaatcatcagcttcctcagcta 27558377  T
Q  110 gctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtc 209  Q
    ||||||| ||||| ||||| || ||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||    
T  27558376 gctgatgcgtaccgaatcgcactttctgaacctcagtgcactacatcacacggaaaatcctctcaatctccttaagccacgtctgggctccatcaaggtc 27558277  T
Q  210 atatcttcctttgaa 224  Q
    |||||||||||||||    
T  27558276 atatcttcctttgaa 27558262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 227
Target Start/End: Complemental strand, 24292442 - 24292227
Alignment:
Q  12 caggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagc 111  Q
    ||||||||||||| |||| |||||||||||||| |||||||| |||||| |||||||||| ||||||  ||||||||| |||||||||||||| ||||||    
T  24292442 caggaactctctcctgaaaacagcccaagtcacaacagctccctcttgcccaagggtaggcagaagagcaacccaccagtcatcagcttcctcggctagc 24292343  T
Q  112 tgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcat 211  Q
    |||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  24292342 tgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctccatcagggtcat 24292243  T
Q  212 atcttcctttgaaagt 227  Q
    | | ||||||||||||    
T  24292242 aacgtcctttgaaagt 24292227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 2871474 - 2871248
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  2871474 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 2871375  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| |||||||||||||||||||| || || |||||  ||||| |||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  2871374 cctcggctagctgatgagtaccaaaccgcactttctgatcctcaatgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 2871275  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  2871274 atcagggtcataacgtcctttgaaagt 2871248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28259869 - 28259643
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||||||||||||  ||||||||| ||||||||||    
T  28259869 aagtatcttctcaggaactccctcttgaaaacagcccaagtcacaacagctccctcctgctcaagggtaggtagaagagcaacccaccagtcatcagctt 28259770  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  | || ||||||||||| || |||||||||||||||||||| |||||||| |||||||||||    
T  28259769 cctcggccagctgatgagtaccaaaccgaactttctgatcttccgtgcactgcataacccggaaaatcctctctatctctttaagccacgtctgggctcc 28259670  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  28259669 atcagggtcataacgtcctttgaaagt 28259643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 28286047 - 28286273
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||||||||||||  ||||||||| ||||||||||    
T  28286047 aagtatcttctcaggaactccctcttgaaaacagcccaagtcacaacagctccctcctgctcaagggtaggtagaagagcaacccaccagtcatcagctt 28286146  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  | || ||||||||||| || |||||||||||||||||||| |||||||| |||||||||||    
T  28286147 cctcggccagctgatgagtaccaaaccgaactttctgatcttccgtgcactgcataacccggaaaatcctctctatctctttaagccacgtctgggctcc 28286246  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  28286247 atcagggtcataacgtcctttgaaagt 28286273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28338618 - 28338392
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||||||||||||  ||||||||| ||||||||||    
T  28338618 aagtatcttctcaggaactccctcttgaaaacagcccaagtcacaacagctccctcctgctcaagggtaggtagaagagcaacccaccagtcatcagctt 28338519  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  | || ||||||||||| || |||||||||||||||||||| |||||||| |||||||||||    
T  28338518 cctcggccagctgatgagtaccaaaccgaactttctgatcttccgtgcactgcataacccggaaaatcctctctatctctttaagccacgtctgggctcc 28338419  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  28338418 atcagggtcataacgtcctttgaaagt 28338392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 29589111 - 29588885
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||| |||| |  ||||||||| ||||||||||    
T  29589111 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccttcctgctcgagggtaggcagaatagcaacccaccagtcatcagctt 29589012  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || || ||||||||||||||||| || ||||||||  | |||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  29589011 catcggccagctgatgagtaccaaaccgcaccttctgatcttcagtgcactgcataactcggaaaatcctctcaatctccttaagccacgtctgggctcc 29588912  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||| ||||||||||||    
T  29588911 atcagggtcatatcgtcctttgaaagt 29588885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 5835900 - 5835674
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||||||| ||||||||||| |||||||||||||||| || |||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||    
T  5835900 aagtatctcctcgggaactctctcctgaacacagcccaagtaacaacagctccctcttgctcaaggttaggtagcagactaacccaccagtcatcagctt 5835801  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || |||||||| |||||||| || || |||||  | |||||||| ||||| ||||| || |||||||| |||||||| ||||| ||||| |||||    
T  5835800 cctcggccagctgatgcgtaccaaaacgcactttctgatcttcagtgcattgcataacacgaaagatcctctcaatctccttgagccaagtctgagctcc 5835701  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  5835700 atcggggtcatatcttcccttgaaagt 5835674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 28313239 - 28313465
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||| ||| |||| |||||||||||||| |||||||| || ||||||||||||||||||| |  ||||||||| ||||||||||    
T  28313239 aagtatcttctcaggaactccctcctgaaaacagcccaagtcacaacagctccctcctgctcaagggtaggtagaatagcaacccaccagtcatcagctt 28313338  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  | || ||||||||||| || |||||||||||||||||||| |||||||| |||||||||||    
T  28313339 cctcggccagctgatgagtaccaaaccgaactttctgatcttccgtgcactgcataacccggaaaatcctctctatctctttaagccacgtctgggctcc 28313438  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | ||||||||||||    
T  28313439 atcagggtcataacgtcctttgaaagt 28313465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 16575499 - 16575725
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||| | |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  16575499 aagtatcttctcaggaactctctcctgaaaacagcccaagtcgcaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 16575598  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16575599 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 16575698  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | |||| |||||||    
T  16575699 atcagggtcataacgtcctctgaaagt 16575725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 16619881 - 16619655
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||| | |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  16619881 aagtatcttctcaggaactctctcctgaaaacagcccaagtcgcaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 16619782  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||||||    
T  16619781 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataacccggaaaatcctctcaatctccttaagccacgtctgggctcc 16619682  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | |||| |||||||    
T  16619681 atcagggtcataacgtcctctgaaagt 16619655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22437481 - 22437707
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||| ||||||||||  |||| || |||||||| ||||||||||||||||||||| ||||||||||| |||    
T  22437481 aagtatcttcttaggaactccctcctaaacacatcccaagtcacagcagcaccatcttgctctagggtaggtagaagactaaccgaccaatcatcaactt 22437580  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| |||||||| || |||||||| ||||||||||||||||   | |  |||||||||||||| ||  |||||||    
T  22437581 cctcagccagctgatgtgtaccaaatcgcaccttctgaacttcagtgcattgcatcacacggaaaactattttgatctccttaagccacgttcgggctcc 22437680  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  22437681 atcggggtcatatcttcccttgaaagt 22437707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 27206231 - 27206456
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||||||||||||||    
T  27206231 aagtatcttctcaagaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccaatcatcagctt 27206330  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || || ||  |||| ||||||||||| || |||||||||||||| |||||||| ||||| |||||||||||    
T  27206331 cctctgccagctgatgagtaccaaaccgcactttatgatcctccgtgcactgcataacccggaaaatcctctcaatctccttgagccacgtctgggctcc 27206430  T
Q  201 atcggggtcatatcttcctttgaaag 226  Q
    ||| ||||||||   |||||||||||    
T  27206431 atcagggtcataatgtcctttgaaag 27206456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 27242997 - 27242772
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||||||||||||||    
T  27242997 aagtatcttctcaagaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccaatcatcagctt 27242898  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || || ||  |||| ||||||||||| || |||||||||||||| |||||||| ||||| |||||||||||    
T  27242897 cctctgccagctgatgagtaccaaaccgcactttatgatcctccgtgcactgcataacccggaaaatcctctcaatctccttgagccacgtctgggctcc 27242798  T
Q  201 atcggggtcatatcttcctttgaaag 226  Q
    ||| ||||||||   |||||||||||    
T  27242797 atcagggtcataatgtcctttgaaag 27242772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 22829058 - 22828880
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||| ||| |||||||||   ||||||||||| |||||||||||||||||||||||||||    
T  22829058 aagtatcttctcaggaactctctcctgaacacagcccaggtcacaacaactccttcttagccaagggtaggttgaagactaacccaccaatcatcagctt 22828959  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctc 179  Q
    ||||||||||||||||||||||||| || || |||||  | |||||||||||||| |||| |||||||||||| |||||    
T  22828958 cctcagctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacaccgaaaatcctctcaatctc 22828880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 18182044 - 18181836
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |  || || || |||||||| || |||||||||||||||| ||||||||||||| |||||||||||| ||    
T  18182044 aggaactctctcctaaacacagcccaagtaataactgcaccatcttgctctagagtaggtagaagactaatccaccaatcatcaacttcctcagctaact 18181945  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    |||| |||||||| || |||||||| || |||||||| ||||| |||||||||| |||||| ||||| || ||||| ||||| ||| |||| ||||| ||    
T  18181944 gatgcgtaccaaaacgcaccttctgaacttcagtgcattgcataacacggaaaaccctctcaatctctttgagccacgtctgagcttcatcagggtcgta 18181845  T
Q  213 tcttccttt 221  Q
     ||||||||    
T  18181844 ccttccttt 18181836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 23082050 - 23082261
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| | |||||| ||||||| || ||||| || || ||||| |  |||||||||||||||| ||||||||||| ||||||||||  ||||   |    
T  23082050 aactctctcctaaacacaacccaagtaacaacagcaccatcctgctccaaagtaggtagaagactaatccaccaatcattagcttcctcaaatagcatgt 23082149  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
      |||||||| || |||||||| ||||| |||||||||||||||||||| |  ||||| ||||| |||||||| ||||| |||||||| |||||||||||    
T  23082150 ccgtaccaaaacgcaccttctgaacctctgtgcactgcatcacacggaacactctctcaatctctttaagccacgtctgagctccatcagggtcatatct 23082249  T
Q  216 tcctttgaaagt 227  Q
    ||||||||||||    
T  23082250 tcctttgaaagt 23082261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 18404593 - 18404379
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |||||| | || |||||||| |  |||||||||||||| |||||||||||||||||||| |||||||||     
T  18404593 aggaactctctcctaaacacagcccaagtaaccacaacaccatcttgctctaaagtaggtagaagactcacccaccaatcatcagcttcttcagctagca 18404494  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || ||||||| |||||| |  |||| ||| |||||||| |  ||||| ||||| || ||||| |||||||||||||  ||||||||    
T  18404493 tgtgcgtaccaaaacgcaccttctagacctctgaacactacattacacggaacactctctcaatctctttgagccacgtctgggctccattagggtcata 18404394  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  18404393 tcttcccttgaaagt 18404379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 19667070 - 19667284
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||| ||||| |||||| | || |||||||| |  |||||||||||||| |||||||| ||||||||||| |||||||||     
T  19667070 aggaactctctcctaaacacagctcaagtaaccacaacaccatcttgctctaaagtaggtagaagactcacccaccagtcatcagcttcatcagctagca 19667169  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||  |||||||||||||||| || || || |  ||||| |||||||| || || ||||| |||||||| ||||||||    
T  19667170 tatgcgttccaaaacgcaccttctgaccctcagtgcactgcataactcgaaacactctctcaatctccttgaggcacgtctgagctccatcagggtcata 19667269  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  19667270 tcttcccttgaaagt 19667284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 19868230 - 19868424
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  |||||||||| ||| | |||||| ||||||| |||||||| || |||||||| |  |||||||||||||||| |||||||||| ||||||    
T  19868230 aagtatctgttcaggaactccctcctaaacacaacccaagtaaccacagcaccgtcttgctctaatgtaggtagaagactaatccaccaatcaccagctt 19868329  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgg 195  Q
     |||| | |||||||| |||||||| || |||||||| || || |||| |||||||||||||||||  ||||| ||||| |||||||| ||||||    
T  19868330 actcaaccagctgatgtgtaccaaaacgcaccttctgaacttcggtgccctgcatcacacggaaaactctctcaatctctttaagccacgtctgg 19868424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 23084482 - 23084268
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || ||  | ||| | ||||| ||| ||||||||| ||| |||||| |||| |||||||||||| |||||     
T  23084482 aggaactctctcctaaacacagcccaagtaacaactccacctccgtgctctaggataggtagaatactcacccactaatcgtcagcttcctcatctagca 23084383  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| |||||| |||| ||||| || |||||||||||||||| ||| || ||||| ||||| |||||||| || |||||    
T  23084382 tgtgcgtaccaaagcgcaccttctgaacctcattgcattgcataactcggaaaatcctctctacctctttgagccacgtctgagctccatctggatcata 23084283  T
Q  213 tcttcctttgaaagt 227  Q
     ||||||||||||||    
T  23084282 ccttcctttgaaagt 23084268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 25958422 - 25958198
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||| |||||| ||||| ||||| |||||||| || ||  | ||| | ||||| | | | ||| ||| |||||||||||||||||||||||    
T  25958422 aagtatctattcaagaactccctcttaaacacggcccaagtaacaactccacctccatgctctaagatgggttgaatactaacccaccaatcatcagctt 25958323  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||   || |||||||| || ||||||||||| ||| |||| ||||| || ||||| || ||||||| ||| || ||||| |  || |||||    
T  25958322 cctcagctagcatgtgcgtaccaaaacgcaccttctggacttcattgcattgcataactcggaagattctctctacctctttgagccacgattgagctcc 25958223  T
Q  201 atcggggtcatatcttcctttgaaa 225  Q
    ||| || ||||| ||||||||||||    
T  25958222 atctggatcataccttcctttgaaa 25958198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 25116259 - 25116380
Alignment:
Q  91 tcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatg 190  Q
    ||||||| |||||| ||||||| ||||||||| || || || |||||  |||||||||| ||||| || |||||||||||||| ||||| |||||||| |    
T  25116259 tcatcagtttcctcggctagcttatgagtaccgaaccgcactttctgatcctcagtgcattgcataacccggaaaatcctctcaatctctttaagccacg 25116358  T
Q  191 tctgggctccatcggggtcata 212  Q
    |||||||||||||  |||||||    
T  25116359 tctgggctccatcacggtcata 25116380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 8720364 - 8720151
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||| ||| ||||||||||| || ||||| |||||   ||||| |||||| |||||||||||||| || || ||||| |     
T  8720364 tcaggaattctctcctgaacacagtccaggtcaccacagcaccatcttgttcaagcacaggtaaaagacttacccaccaatcatctgcctcttcagccaa 8720265  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| ||||| |  |||||||| || |  ||||| || || |  ||||| |||||  |||||||||| || ||||||    
T  8720264 catgtgcgtaccaaaccgcaccttctgcacctctgaacactgcataactctaaaaattctttcaacttccttgagccacttctgggctccgtcagggtca 8720165  T
Q  211 tatcttcctttgaa 224  Q
    ||||||||||||||    
T  8720164 tatcttcctttgaa 8720151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20010170 - 20009947
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||||||| || ||| |||| |||| ||| || ||||| ||||| ||||| || |   |||||| ||| |  ||||||||||||||  | |    
T  20010170 aagtatctattcaggaattccctcctgaatacagtccatgttaccaccgctccgtcttgttccaacataggtaaaaggcctacccaccaatcatctacct 20010071  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||   || || || || || ||||| || ||||||| ||||||||| || | ||| ||||||||||  ||||| |||||||||||||||||    
T  20010070 cctcagccagcatgtgtgtcccgaaccgcaccttttgcacctcagagcactgcatgactctgaagatcctctctacttccttcagccatgtctgggctcc 20009971  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||| ||||| |||||    
T  20009970 atcggggtcataccttcccttgaa 20009947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 226
Target Start/End: Original strand, 18326538 - 18326694
Alignment:
Q  70 ggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcc 169  Q
    ||||||| ||| ||||||||||||||||||||||| |||| |   || |||||||| || |||||||| |||||| |||| ||||| || ||||||||||    
T  18326538 ggtagaacactcacccaccaatcatcagcttcctccgctaacatgtgcgtaccaaagcgcaccttctgaacctcattgcattgcatgacccggaaaatcc 18326637  T
Q  170 tctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaag 226  Q
    | || |  || || ||||| ||||| |||||||| || ||||  ||||| |||||||    
T  18326638 tttcaacttctttgagccacgtctgagctccatcaggatcatgccttcccttgaaag 18326694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 24515083 - 24514985
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| |||||| |||||||||||||||||||||| || || || || |||||   |||||  ||||| |||||||| |||||||| ||||||||||    
T  24515083 tcaggaattctctcctgaacacagcccaagtcaccaccgcaccgtcctgttcaagcacaggtaacagacttacccaccagtcatcagcctcctcagcta 24514985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 19882018 - 19882195
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| || ||| ||||||||||||| || ||||| || || || ||||||||   |||||  ||||| ||||||||||||||||| ||||| |||||    
T  19882018 tcaggaattccctcctgaacacagcccaggttaccactgcaccatcctgctcaagcacaggtaacagacttacccaccaatcatcagcctcctctgctag 19882117  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagcca 188  Q
    |   || || ||||| || ||||| || |  |||| ||||||||| || | ||| |||||||| | |||||| |||||    
T  19882118 catgtgcgtcccaaaccgcaccttttgaatttcagagcactgcatgaccctgaagatcctctccacctccttcagcca 19882195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18660531 - 18660639
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  |||||||||||||| | |||||||||||||| || ||  | | | | | ||| | | ||||| ||| |||||||||||||||||||||||    
T  18660531 aagtatctgttcaggaactctctcctaaacacagcccaagtaacaactccacttccgtactctaagataggttgaatactaacccaccaatcatcagctt 18660630  T
Q  101 cctcagcta 109  Q
    |||| ||||    
T  18660631 cctccgcta 18660639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 19456647 - 19456743
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||| |||||| |||||||||||||||||| ||||||||| || || || ||   ||| |  | ||| |||||||| |||||||||||||||||||    
T  19456647 aggaattctctcctgaacacagcccaagtcatcacagctccatcatgttccagcacaggcaacaaacttacccaccagtcatcagcttcctcagcta 19456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 19466792 - 19466888
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||| |||||| |||||||||||||||||| ||||||||| || || || ||   ||| |  | ||| |||||||| |||||||||||||||||||    
T  19466792 aggaattctctcctgaacacagcccaagtcatcacagctccatcatgttccagcacaggcaacaaacttacccaccagtcatcagcttcctcagcta 19466888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 34642244 - 34642144
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| || ||| ||||||||||||| |||||||| || || || ||||||||    ||||| ||||| |||||||||||||| || ||||| |||||    
T  34642244 tcaggaattccctcctgaacacagcccaggtcaccaccgcaccgtcctgctcaagtaccggtagcagacttacccaccaatcatcggcctcctccgctag 34642145  T
Q  111 c 111  Q
    |    
T  34642144 c 34642144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 16814262 - 16814360
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| |||||| ||||||||||||| ||||||||| | || ||||| |||||   ||||| ||||||   |||||||||||| || || |||||||    
T  16814262 tcaggaattctctcctgaacacagcccaggtcaccacaacaccatcttgttcaagcacaggtaaaagacttttccaccaatcatctgcctcttcagcta 16814360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 21475226 - 21475371
Alignment:
Q  82 acccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctcct 181  Q
    |||||||| |||||||| |||||||| | |   || |||||||| || || ||||| || ||| |||| ||||| || | |||||||||||| | ||| |    
T  21475226 acccaccagtcatcagcctcctcagccaacatgtgcgtaccaaagcgcactttctgtacttcattgcattgcataaccctgaaaatcctctcaacctctt 21475325  T
Q  182 taagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||  |||| |||||||| || | |||||| |||||||||||    
T  21475326 tgagccacttctgtgctccatcaggattatatctacctttgaaagt 21475371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 227
Target Start/End: Original strand, 25771537 - 25771682
Alignment:
Q  82 acccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctcct 181  Q
    |||||||| |||||||| |||||||| | |   || |||||||| || |||||||| || ||| |||| ||||| || | |||||||||||| | ||| |    
T  25771537 acccaccagtcatcagcctcctcagccaacatgtgcgtaccaaagcgcaccttctgtacttcactgcattgcatgaccctgaaaatcctctcaacctctt 25771636  T
Q  182 taagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||  |||  |||||||| || | |||||| |||||||||||    
T  25771637 tgagccacttctatgctccatcaggattatatctacctttgaaagt 25771682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 513 - 736
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||| | ||||||||||||||| |||||||||||||||||||  |||| || |||| ||| ||| |||||||||| ||||||||||||||||||||||    
T  513 aagtattttctcaggaactctctcctgaacacagcccaagtcacagcagcaccatcttactctaggttaggtagaaggctaacccaccaatcatcagctt 612  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||||||||| |||||||||||| | |||||||||||    
T  613 cctcagccagctgatgtgtaccaaatcgcactttctgaacctcagtgcactgcatcactcgaaaaatcctctcgatctccttaagcaacgtctgggctcc 712  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||||||||| |||||    
T  713 atcggggtcatatcttcccttgaa 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 345 - 568
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| | ||||||||||||||||| ||||| || |||||||| ||| |||| ||||| ||||||||||||||||||||||    
T  345 aagtatcttctcaagaactctctcctaaacacagcccaagtcacaacagcaccgtcttgctctaggttaggcagaaggctaacccaccaatcatcagctt 444  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||  ||||| || ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  445 cctcagctagctgatgcgtactgaatcgcactttctgaatctcagtgcactgcatcacacggaaaatcctctcaatctccttaagccacgtttgggctcc 544  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  545 atcagggtcatatcttcctttgaa 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 15700 - 15914
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| ||||| || ||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||     
T  15700 aggaactccctcctaaacacagcccaagtcacaacagcaccatctagctctagggtaggtagaagactcacccaccaatcatcagcttcctcagctagca 15799  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| ||||||||||  ||||| |  ||||||||||| || || |  ||||| |||||||| ||||| |||| |||||||||  ||| |||    
T  15800 tgtgcgtaccaaaacgtaccttctaaacctctgaacactgcatcacgcgaaacactctctcaatctccttgagccacgtctaggctccatcatggttata 15899  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  15900 tcttcccttaaaagt 15914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 136; Significance: 4e-71; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 32656 - 32879
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| | ||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||||||| ||||||||||||    
T  32656 aagtatcttcttaggaactctctcctaaacacagcccaagtcacaacagcaccatcttgctctagggtaggtaggagactaacccactaatcatcagctt 32755  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| |||||||| || |||||||||||||||||| ||||||  ||||| ||||||| |||||| |||||||||||    
T  32756 cctcagcaagctgatgtgtaccaaatcgcaccttctgaacttcagtgcactgcatcacatggaaaactctctcgatctcctgaagccacgtctgggctcc 32855  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||||||||| |||||    
T  32856 atcggggtcatatcttcccttgaa 32879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 55414 - 55641
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||||||||||||||  || | || |||||||| |||||||||||||||||||||||||||||||||||||    
T  55414 aagtatctgcttaggaactccctcctaaacacagcccaagtcacagcatcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 55513  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaag-ccatgtctgggctc 199  Q
    ||||||||| |||||| |||||||||||||||||||| || |||||||| ||||| ||||||||||  || || ||||| ||||| ||| ||||||||||    
T  55514 cctcagctaactgatgtgtaccaaatcgtaccttctgaacttcagtgcattgcataacacggaaaactctttcaatctctttaagtccacgtctgggctc 55613  T
Q  200 catcggggtcatatcttcctttgaaagt 227  Q
    ||||||||||||||||||| ||||||||    
T  55614 catcggggtcatatcttcccttgaaagt 55641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 30101 - 29875
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||||||||||||||  |||| || |||||||| ||||||||||||| |||||||||||||||||||||||    
T  30101 aagtatctgcttaggaactccctcctaaacacagcccaagtcacagcagcaccatcttgctctagggtaggtagaaaactaacccaccaatcatcagctt 30002  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| |||||||| || |||||||| ||||||||||||||||  ||||| |||||||||||||| |||||| ||||    
T  30001 cctcagccagctgatgtgtaccaaatcgcaccttctgaacatcagtgcaatgcatcacacggaaaactctctcgatctccttaagccacgtctggactcc 29902  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  29901 atcggggtcatatcttcccttgaaagt 29875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 42968 - 42870
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagc 111  Q
    |||||||||||| | |||||||||||||| |||||| | || | | |||| |  |||||||||||||| |||||||| ||||||||||| |||||||||    
T  42968 aggaactctctcctaaacacagcccaagtaaccacaacaccatttagctctaaagtaggtagaagactcacccaccagtcatcagcttcttcagctagc 42870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 41421 - 41312
Alignment:
Q  118 gtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttc 217  Q
    |||||||| || |||||||| || || |  |||||||||||||| || |  ||||||||||| || ||||| ||||| |||||||| |||||||||||||    
T  41421 gtaccaaaacgcaccttctgaacatctgaacactgcatcacacgaaacactctctctatctctttgagccaagtctgagctccatcagggtcatatcttc 41322  T
Q  218 ctttgaaagt 227  Q
    | ||||||||    
T  41321 ccttgaaagt 41312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 918 - 1141
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  | || || |||||||| ||| |||| ||||| ||||||||||||||||||||||    
T  918 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagccgcaccgtcttgctctaggttaggcagaaggctaacccaccaatcatcagctt 1017  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||| ||| ||||| ||||  || ||||||||||||||||||||||||||||||||||||||||| || |  |||||||| |||||||||||    
T  1018 cctcagctagctaatgcgtaccgaatcacactttctggacctcagtgcactgcatcacacggaaaatcctctcaatatatttaagccacgtctgggctcc 1117  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  1118 atcagggtcatatcttcctttgaa 1141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 23753 - 23530
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| | |||||||||||||||||  |||| || |||||||| ||| |||| |||||  |||||||||| ||||||||||    
T  23753 aagtatcttctcaggaactctctccttaacacagcccaagtcacagcagcaccatcttgctctaggttagggagaaggataacccaccagtcatcagctt 23654  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||||||  | || ||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||    
T  23653 cctcagctagctgatgtgtaccaaaatgcactttctgtacctcagtgcactgcatcacacggaaaatcctctcgatctccttaatccacgtctgggctcc 23554  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  23553 atcagggtcatatcttcctttgaa 23530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 9032 - 9197
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  9032 aagtatctcctcaggaactctctcctgaacacagcccaagtaacaacagctccttcttgctcaagggtaggtaaaagactaacccaccagtcatcagctt 9131  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaat 167  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  9132 cctcagctagctgatgagtaccaaatcgca-cttctggacctcagtgcactgcatcactcggaaaat 9197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 66057 - 65831
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| | |||||||||||||||||  |||| || |||||||| ||||||||||||||||||||||||||||||||| |||    
T  66057 aagtatcttcttaggaactctctcctaaacacagcccaagtcacagcagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcaactt 65958  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||| ||||||| || ||||| |||| ||||||||||||||| |||||||  ||||  |||||||||||||| |||||||||||    
T  65957 cctcagccagctgatgtgtatcaaatcgcactttctgaaccttagtgcactgcatcactcggaaaactctcttgatctccttaagccacgtctgggctcc 65858  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  65857 atcggggtcatatcttcccttgaaagt 65831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 128; Significance: 3e-66; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16593 - 16370
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||||||||| |||  |||||| || |||||||||  |||| || |||||||||||| |||||||||| ||||||||||| |||| |||||    
T  16593 aagtatcttctcaggaactttcttctgaacatagtccaagtcacagcagcaccatcttgctcaaggttaggtagaaggctaacccaccagtcattagctt 16494  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||| |||| ||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||    
T  16493 cctcagctagctgatgcgtaccgaatcatactttctgaacctcagtgcactgcatcactcgaaaaatcctctcgatctccttaagccacgtctgggctcc 16394  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||||||||| |||||    
T  16393 atcggggtcatatcttcccttgaa 16370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 21115 - 20892
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||||||||| |||  |||||| || |||||||||  |||| || |||||||||||| |||||||||| ||||||||||| |||| |||||    
T  21115 aagtatcttctcaggaactttcttctgaacatagtccaagtcacagcagcaccatcttgctcaaggttaggtagaaggctaacccaccagtcattagctt 21016  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||| |||| ||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||||    
T  21015 cctcagctagctgatgcgtaccgaatcatactttctgaacctcagtgcactgcatcactcgaaaaatcctctcgatctccttaagccacgtctgggctcc 20916  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||||||||||||||||| |||||    
T  20915 atcggggtcatatcttcccttgaa 20892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 194383 - 194178
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||| | || |||||| | || |||||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||     
T  194383 aggaactccctcctaaacacagcctaggtaaccacaacaccgtcttgctctagggtaggtagtagactcacccaccaatcgtcagcctcctcagctagca 194284  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || |||||  | || |||||||| ||||||||||||||||||||||| |  ||||| ||||| || |||||||||||||||||||| ||||| ||    
T  194283 tatgcgttccaaaatgcactttctggacttcagtgcactgcatcacacggaagactctctcaatctctttgagccatgtctgggctccatcagggtcgta 194184  T
Q  213 tcttcc 218  Q
    ||||||    
T  194183 tcttcc 194178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 565 - 791
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||||||||||||||||||  |||| || |||||||| ||| |||||||||| ||||||||||||||||||||||    
T  565 aagtatcttctcaagaactctctcctgaacacagcccaagtcacagcagcaccctcttgctctaggttaggtagaaggctaacccaccaatcatcagctt 664  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| |||||||| || || ||||| || |||||||||| |||||| || ||||||||||| |||||||||||||| || ||||||||    
T  665 cctcagctagctgatgtgtaccaaaacgcactttctgaacttcagtgcactacatcactcgaaaaatcctctcgatctccttaagccacgtttgggctcc 764  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| ||||| |||||||| ||||||||    
T  765 atcagggtcgtatcttcccttgaaagt 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 121703 - 121469
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagacta--------acccaccaatc 92  Q
    |||||||| ||||||||||||||| | |||||||||||||||||  |||| || |||||||| ||| ||||||||||||||        |||||||||||    
T  121703 aagtatcttctcaggaactctctcctaaacacagcccaagtcacagcagcaccatcttgctctaggttaggtagaagactagaagactaacccaccaatc 121604  T
Q  93 atcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtc 192  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||| |||    
T  121603 atcagcttcctcagccagctgatgtgtaccaaatcgcactttctgaacctcagtgcactgcttaacacggaaaatcctctcgatctccttaagccacgtc 121504  T
Q  193 tgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||||||||| |||||||||||||| ||||||||    
T  121503 tgggctccatcagggtcatatcttcccttgaaagt 121469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 1469 - 1426
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctcct 54  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  1469 tcaggaattctctcctgaatacagcccaagtcaccacagctcct 1426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 701 - 896
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| |||||| | ||||||||| ||||||||||    
T  701 aagtatcttctcaggaactctctcttgaacacagcccaggtcacaacagctccttcttgcccaagggtagttagaaggccaacccaccagtcatcagctt 800  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctggg 196  Q
    ||||||||||||||||||||||||| || || |||||  | |||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||    
T  801 cctcagctagctgatgagtaccaaaccgcactttctgatcttcagtgcactgcataacacggaaaatcctctcaatctctttaagccacgtctggg 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 820 - 1034
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| ||||| || |||||||| |  |||||||||||||||| |||||||||||||||||||||||| | ||    
T  820 aggaactccctcctaaacacagcccaagtcacaacagcaccgtcttgctccaaagtaggtagaagactaatccaccaatcatcagcttcctcagccaact 919  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    ||||||||||||| || |||||||| || || ||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||| ||||||||    
T  920 gatgagtaccaaaacgcaccttctgaacttcggtgcactgcatcacacggaaaactctctcaatctccttaagccacgtctgggctccatcagggtcata 1019  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  1020 tcttcccttgaaagt 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 9376 - 9427
Alignment:
Q  176 tctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  9376 tctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagt 9427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 36347 - 36121
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||||||||||||||  |||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  36347 aagtatctgcttaggaactccctcctaaacacagcccaagtcacagcagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 36248  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| ||||||||  | |||||||| ||||| ||| ||||||  ||||| |||||||||||||| |||| ||||||    
T  36247 cctcagccagctgatgtgtaccaaatcgcaccttctgatcttcagtgcattgcataacatggaaaactctctcgatctccttaagccacgtctcggctcc 36148  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||| ||||||||||||| ||||||||    
T  36147 atcgaggtcatatcttcccttgaaagt 36121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 107304 - 107078
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| ||||||||||||||||||| |||||||| || ||| |||||||||| ||||||  | ||||||| ||||||||||    
T  107304 aagtatcttctcaagaactctctcctgaacacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcagcccaccagtcatcagctt 107205  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||||||||||||||||||||| || || |||||  |||||||||||||||| |||| |||||||||||| ||||| |||||||| |||||||||||    
T  107204 cctcagctagctgatgagtaccaaaccgcactttctgatcctcagtgcactgcataacacagaaaatcctctcaatctctttaagccacgtctgggctcc 107105  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||  |||||||| | ||||||||||||    
T  107104 attagggtcataacgtcctttgaaagt 107078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 8991 - 9217
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||||||||||||||||  |||| || |||||||  ||||||||||||||||||||||||||||||||| |||    
T  8991 aagtatctgcttaggaactccctcctaaacacagcccaagtcacagcagcaccatcttgctttagggtaggtagaagactaacccaccaatcatcacctt 9090  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || | |||||| ||||||||||| ||||||||  | |||||| |||||||||| |||||||  ||||| |||||||||||||| |||||||||||    
T  9091 cctcggccaactgatgtgtaccaaatcgcaccttctgatcttcagtgtactgcatcacgcggaaaactctctcaatctccttaagccacgtctgggctcc 9190  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||| ||||||||    
T  9191 atcagggtcatatcttcccttgaaagt 9217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 229379 - 229153
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| ||||||||||||||||||    |||||| |||||||||||| |||| || ||||||| |||||||||||||||||    
T  229379 aagtatcttctcatgaactctctcctgaacacagcccaagtcatagtagctccatcttgctcaaggttaggaagtagactaatccaccaatcatcagctt 229280  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||   |||| ||||| ||||| || |||||||||||||||||||||||||| || |||||||| || |||||||||||||| |||||||||||    
T  229279 cctcagctaaaagatgcgtaccgaatcgcactttctggacctcagtgcactgcatcactcgaaaaatcctttcgatctccttaagccacgtctgggctcc 229180  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| ||||||||||||||| |||||||    
T  229179 atcagggtcatatcttcctgtgaaagt 229153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 619 - 396
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||||||| |||||||||||||||||||| |||| || |||||||| ||| |||||||||  ||||||||||| ||||||||||    
T  619 aagtatcttctaaggaactctctcctgaacacagcccaagtcaccgcagcaccgtcttgctctaggttaggtagaaagctaacccaccagtcatcagctt 520  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||||||||||||||| ||||||||  | || ||||| |||||||||||||||||||||||| | |||||||| |||| ||||||||| ||||| |||||    
T  519 cctcagctagctgatgcgtaccaaaatgcactttctgaacctcagtgcactgcatcacacggtagatcctctcgatcttcttaagccacgtctgagctcc 420  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    |||  ||||||||||||| |||||    
T  419 atcaaggtcatatcttcccttgaa 396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 43 - 242
Alignment:
Q  28 aacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatc 127  Q
    |||||||||||||| |||||||| || |||||||| |  |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |    
T  43 aacacagcccaagtaaccacagcaccgtcttgctctaaagtaggtagaagactaatccaccaatcatcagcttcctcagccagctgatgagtaccaaaac 142  T
Q  128 gtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||||| || || ||||||||||||||||||||||  ||||| || || |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  143 gcaccttctgaacttcggtgcactgcatcacacggaaaactctctcaatatctttaagccacgtctgggctccatcggggtcatatcttcccttgaaagt 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 11931 - 11715
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| || ||| ||||||||||||| ||||||||||| || || || |||||  ||||||  ||||| |||||||||||||||||||||||| |||     
T  11931 tcaggaattccctcctgaacacagcccaggtcaccacagcaccatcctgttcaagcataggtaacagacttacccaccaatcatcagcttcctcaactaa 11832  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| || |||||||| || ||| |||| ||||| || | |||||||||||| | |||||| |||||  |||| ||||| || ||||||    
T  11831 catgtgcgtcccaaaccgcaccttctgcacttcactgcattgcataactctgaaaatcctctcaacctccttgagccacttctgagctccgtcagggtca 11732  T
Q  211 tatcttcctttgaaagt 227  Q
    || || ||||| |||||    
T  11731 tacctccctttaaaagt 11715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 20111 - 19895
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| || ||| ||||||||||||| ||||||||||| || || || |||||  ||||||  ||||| |||||||||||||||||||||||| |||     
T  20111 tcaggaattccctcctgaacacagcccaggtcaccacagcaccatcctgttcaagcataggtaacagacttacccaccaatcatcagcttcctcaactaa 20012  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| || |||||||| || ||| |||| ||||| || | |||||||||||| | |||||| |||||  |||| ||||| || ||||||    
T  20011 catgtgcgtcccaaaccgcaccttctgcacttcactgcattgcataactctgaaaatcctctcaacctccttgagccacttctgagctccgtcagggtca 19912  T
Q  211 tatcttcctttgaaagt 227  Q
    || || ||||| |||||    
T  19911 tacctccctttaaaagt 19895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 22381 - 22608
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || ||||| || ||| | |||||||||||||||||  |||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  22381 aagtatctacttaggaaatccctcctaaacacagcccaagtcacagcagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 22480  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctc- 199  Q
    ||||||| ||||||||  |||||||||| |||||||| || |||||||| ||||| ||||||||||  ||||| |||||||||||||||| ||||||||     
T  22481 cctcagccagctgatgtataccaaatcgcaccttctgaacttcagtgcattgcataacacggaaaactctctcgatctccttaagccatgcctgggctct 22580  T
Q  200 catcggggtcatatcttcctttgaaagt 227  Q
     |||||||||||||||||| ||||||||    
T  22581 tatcggggtcatatcttcccttgaaagt 22608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 37805 - 38032
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || ||||| || ||| | |||||||||||||||||  |||| || |||||||| |||||||||||||||||||||||||||||||||||||    
T  37805 aagtatctacttaggaaatccctcctaaacacagcccaagtcacagcagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagctt 37904  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctc- 199  Q
    ||||||| ||||||||  |||||||||| |||||||| || |||||||| ||||| ||||||||||  ||||| |||||||||||||||| ||||||||     
T  37905 cctcagccagctgatgtataccaaatcgcaccttctgaacttcagtgcattgcataacacggaaaactctctcgatctccttaagccatgcctgggctct 38004  T
Q  200 catcggggtcatatcttcctttgaaagt 227  Q
     |||||||||||||||||| ||||||||    
T  38005 tatcggggtcatatcttcccttgaaagt 38032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 6517 - 6303
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||    
T  6517 aggaactccctcctaaacacagcccaagtcacaacagcaccatcttgctctagggtaggtagaagactaacccaccaatcatcagcttcctcagccaact 6418  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    |||  ||||||||||| |||||||| || |||||||| ||||| ||||||||||  || || ||||| |||||||| |||||||||||||||||||||||    
T  6417 gatatgtaccaaatcgcaccttctgaacttcagtgcattgcataacacggaaaactctttcaatctctttaagccacgtctgggctccatcggggtcata 6318  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  6317 tcttcccttaaaagt 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 31064 - 31290
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||| ||| ||| | |||||||||||||| |||||||| |  || ||||| |  |||||||||||||||| |||||||||||||||||    
T  31064 aagtatctgcttaggatctccctcctaaacacagcccaagtaaccacagcactgtcctgctctaaagtaggtagaagactaatccaccaatcatcagctt 31163  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| | |||||| |||||||| || |||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||    
T  31164 cctcagccaactgatgtgtaccaaaacgcaccttctgaacctcagtgcactgcatcacacggaaaactctctcgatctccttaagccacgtctgggctcc 31263  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||| ||||||||    
T  31264 atcagggtcatatcttcccttgaaagt 31290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 628 - 845
Alignment:
Q  10 ctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||||||| ||| | |||||||||||||| |||||| | || |||||||| |  |||||||||||||||| |||||||||||||||||||||||| |    
T  628 ctcaggaactccctcctaaacacagcccaagtaaccacaacaccgtcttgctctaaagtaggtagaagactaatccaccaatcatcagcttcctcagcca 727  T
Q  110 gctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtc 209  Q
      ||||| ||||||||||| |||||||| || |||||||||||||| ||||||||||  || ||||||||||||||||| ||||||| ||||||||||||    
T  728 attgatgtgtaccaaatcgcaccttctgaacttcagtgcactgcataacacggaaaactctttctatctccttaagccacgtctgggatccatcggggtc 827  T
Q  210 atatcttcctttgaaagt 227  Q
    ||||||||| ||||||||    
T  828 atatcttcccttgaaagt 845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 34272 - 34073
Alignment:
Q  28 aacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatc 127  Q
    |||||||||||||| |||||||| || |||||||| |  |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||| |    
T  34272 aacacagcccaagtaaccacagcaccgtcttgctccaaagtaggtagaagactaatccaccaatcatcagcttcctcagccagctgatgtgtaccaaaac 34173  T
Q  128 gtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||||| || || ||||||||||||||||||||||  ||||| | |||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  34172 gcaccttctgtacttcggtgcactgcatcacacggaaaactctctcaacctccttaagccacgtctgggctccatcagggtcatatcttcccttgaaagt 34073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 42421 - 42635
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||||||||||   |||||||||||||| || ||||| || |||||||| |    ||||||||| |||| ||||||||||||||||||||||||||||     
T  42421 aggaactctctcccaaacacagcccaagtaacaacagcaccatcttgctccaaaacaggtagaaggctaatccaccaatcatcagcttcctcagctagca 42520  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || ||||||||  | || ||||| ||||| |  |||||||| || ||||| |  ||||||||||| || ||||| ||||| |||||||| ||||||||    
T  42521 tgtgcgtaccaaaatgcactttctgaacctctgaacactgcatgacccggaacactctctctatctctttgagccaagtctgagctccatcagggtcata 42620  T
Q  213 tcttcctttgaaagt 227  Q
    |||||||||||||||    
T  42621 tcttcctttgaaagt 42635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 76141 - 76355
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||||||||||   |||||||||||||| || ||||| || |||||||| |    ||||||||| |||| ||||||||||||||||||||||||||||     
T  76141 aggaactctctcccaaacacagcccaagtaacaacagcaccatcttgctccaaaacaggtagaaggctaatccaccaatcatcagcttcctcagctagca 76240  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || ||||||||  | || ||||| ||||| |  |||||||| || ||||| |  ||||||||||| || ||||| ||||| |||||||| ||||||||    
T  76241 tgtgcgtaccaaaatgcactttctgaacctctgaacactgcatgacccggaacactctctctatctctttgagccaagtctgagctccatcagggtcata 76340  T
Q  213 tcttcctttgaaagt 227  Q
    |||||||||||||||    
T  76341 tcttcctttgaaagt 76355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 23021 - 23247
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  23021 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 23120  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||||    
T  23121 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataactcggaaaatcctctcaatctctttaagccacgtctgggctcc 23220  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | |||| |||||||    
T  23221 atcagggtcataacgtcctctgaaagt 23247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 8010 - 8236
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| |||||||| || ||| |||||||||| ||||||  ||||||||| ||||||||||    
T  8010 aagtatcttctcaggaactctctcctgaaaacagcccaagtcacaacagctccctcctgcccaagggtaggcagaagagcaacccaccagtcatcagctt 8109  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    |||| || ||||||||||||||||| || || |||||  |||| ||||||||||| || |||||||||||||| ||||| |||||||| |||||||||||    
T  8110 cctcggccagctgatgagtaccaaaccgcactttctgatcctccgtgcactgcataactcggaaaatcctctcaatctctttaagccacgtctgggctcc 8209  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||| | |||| |||||||    
T  8210 atcagggtcataacgtcctctgaaagt 8236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7184 - 6958
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | ||||||||||| |||||  |||| || |||||||| ||||||||||||  ||||||| || ||||||||||||    
T  7184 aagtatctgcttaggaactccctcctaaacacagcccatgtcacagcagcaccatcttgctctagggtaggtagattactaacctactaatcatcagctt 7085  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| |||||||| ||||||||||| |||||||| || |||||||| ||||| |||| |||||  || || |||||||||||||| |||||||||||    
T  7084 cctcagccagctgatgtgtaccaaatcgcaccttctgaacttcagtgcattgcataacacagaaaactctttcgatctccttaagccacgtctgggctcc 6985  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  6984 atcggggtcatatcttcccttgaaagt 6958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 11951 - 11725
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | ||||||||||| |||||  |||| || |||||||| ||||||||||||  ||||||| || ||||||||||||    
T  11951 aagtatctgcttaggaactccctcctaaacacagcccaggtcacagcagcaccatcttgctctagggtaggtagattactaacctactaatcatcagctt 11852  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| | |||||  ||||||||||| |||||||| || |||||||| ||||| |||| |||||  || |||||||| |||||||| |||||||||||    
T  11851 cctcagccatctgatttgtaccaaatcgcaccttctgaacttcagtgcattgcataacactgaaaactctttctatctctttaagccacgtctgggctcc 11752  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||| ||||||||    
T  11751 atcggggtcatatcttcccttgaaagt 11725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 36828 - 36724
Alignment:
Q  54 ttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgc 153  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36828 ttcttgctcaagggtaggttgaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgc 36729  T
Q  154 atcac 158  Q
    |||||    
T  36728 atcac 36724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 23048 - 22834
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| |  || || || |||||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||     
T  23048 aggaactctctcctaaacacaacccaagtaaaaactgcaccatcttgctctaggataggtagaagactcacccactaatcatcagcttcctcagctagca 22949  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || ||||| |  ||||||||||| ||||| || || || |  ||||| ||||  || ||||| ||||  |||||||  ||||||||    
T  22948 tgtgcgtaccaaaacgcaccttttcaacctcagtgcattgcataacccgaaacactctctcaatctatttgagccacgtctaagctccattagggtcata 22849  T
Q  213 tcttcctttgaaagt 227  Q
     ||||||||||||||    
T  22848 ccttcctttgaaagt 22834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 16864 - 16650
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| | ||| || |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||     
T  16864 aggaactccctcctaaacacagcccaagtcacaatagcaccatcttgctctagggtaggtagaagactcacccactaatcatcagcttcctcagctagca 16765  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||| |  ||||||||||||||||| |  ||||| |||||||| ||||| |||||||||||||| ||||||||    
T  16764 tgtgcgtaccaaaacgcaccttctgaacctctgaacactgcatcacacggaacactctctcaatctccttgagccacgtctgggctccatcagggtcata 16665  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  16664 tcttccattaaaagt 16650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 49860 - 49648
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||||||||||||| |||||| | || |||||||| |  |||||||||||||||| |||||||||||||||||||||||| | ||    
T  49860 aggaactccctcctaaacacagcccaagtaaccacatcaccgtcttgctctaaagtaggtagaagactaatccaccaatcatcagcttcctcagccaact 49761  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    |||| |||||||| || | ||| || || || ||||||||||||||||||||||  ||||| ||||| || |||||  ||||||||||||||||||||||    
T  49760 gatgtgtaccaaaacgcatcttttgaacttcggtgcactgcatcacacggaaaactctctcaatctctttgagccacatctgggctccatcggggtcata 49661  T
Q  213 tcttcctttgaaa 225  Q
    |||||| ||||||    
T  49660 tcttcccttgaaa 49648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 43486 - 43700
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||| |||||| ||||||||||||| ||||||||| | || || || |||||   |||||  ||||| |||||||| ||||||||||| ||||||| |     
T  43486 aggaattctctcctgaacacagcccaggtcaccacaacaccatcctgttcaagcacaggtaacagacttacccaccagtcatcagcttcttcagctaaca 43585  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || || ||||| || |||||||  |||||| |||| ||||| |||| |||||| || || | |||||| |||||  |||| ||||| || ||||||||    
T  43586 tgtgcgtcccaaaccgcaccttctatacctcactgcaatgcatgacactgaaaattctttcaacctccttgagccacttctgagctccgtcagggtcata 43685  T
Q  213 tcttcctttgaaagt 227  Q
     || ||||| |||||    
T  43686 cctccctttaaaagt 43700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 37275 - 37435
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| |||| |||||||||| |||||||||||||||||||  |||| || |||||||| ||| |||||||||| ||||||||||||||||| ||||    
T  37275 aagtatcttctcaagaactctctcctgaacacagcccaagtcacagcagcaccatcttgctctaggttaggtagaaggctaacccaccaatcatcggctt 37374  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacg 161  Q
    ||||||| |||||||| ||||||||||| || ||||| |||||||||||||||||||||||    
T  37375 cctcagccagctgatgtgtaccaaatcgcactttctgaacctcagtgcactgcatcacacg 37435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 880 - 1095
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| || |||||||| ||| | |||| |||||| ||||  ||| | || ||||| || |||||||||||||||||||||||||||||||||||||    
T  880 aagtatctgcttaggaactccctcctaaacaaagcccatgtcataacaacaccatcttgatctagggtaggtagaagactaacccaccaatcatcagctt 979  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    ||||||| | |||||| ||||||||| | |||||||| || || ||||||||||||||||| ||||  ||||| |||||||||||||| ||| |||||||    
T  980 cctcagccaactgatgtgtaccaaattgcaccttctgaacttcggtgcactgcatcacacgaaaaactctctcaatctccttaagccacgtccgggctcc 1079  T
Q  201 atcggggtcatatctt 216  Q
    ||| || |||||||||    
T  1080 atctggatcatatctt 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3641 - 3855
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||||||||||||||  || | || |||||||| ||  |||| ||||| |||||||||||||||||||       
T  3641 aagtatcttctcaggaactctctcctgaacacagcccaagtcacagcaacaccgtcttgctctagattaggcagaaggctaacccaccaatcatcag--- 3737  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
          |||||||||| | ||| ||||| || ||||||||||||||  ||||||||||||||||||||||||| ||||| || ||||| |||||||||||    
T  3738 ------ctagctgatgcgaaccgaatcgcactttctggacctcagtatactgcatcacacggaaaatcctctcaatctctttgagccacgtctgggctcc 3831  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| ||||||||||||||||||||    
T  3832 atcagggtcatatcttcctttgaa 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 680 - 894
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | ||||||||||| || |||||||| || ||||| || | ||||||||||||||||| ||||||||||||||||||||||||||||     
T  680 aggaactctctcctaaacacagcccaggtaaccacagcaccatcttgttctaaggtaggtagaagactaatccaccaatcatcagcttcctcagctagca 779  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||||| ||||  || |||||||| ||||| |  ||||| ||||| || ||||| |||||||||||||| ||||||||    
T  780 tatgcgttccaaaacgcaccttctggacttcagaacattgcatcacgcggaatactctctcaatctctttgagccacgtctgggctccatcagggtcata 879  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  880 tcttcccttgaaagt 894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 3652 - 3865
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| ||||| |||||||||||||| |||||  ||||  | ||||| |||||    |||| |||||| |||||||||||||| || || ||||| |     
T  3652 tcaggaattctcttttgaacacagcccaggtcacagcagcatcatcttgttcaagcacgggtaaaagacttacccaccaatcatctgcctcttcagccaa 3751  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| || |||||||| || ||| |||| ||||| || | |||||||||||| | ||| || |||||  |||| |||||||| ||||||    
T  3752 catgtgcgtaccaaaccgcaccttctgcacttcactgcattgcatgactctgaaaatcctctcaacctctttgagccaattctgagctccatcagggtca 3851  T
Q  211 tatcttcctttgaa 224  Q
    || || ||||||||    
T  3852 tacctccctttgaa 3865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 24241 - 24027
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||| |||||| |||||| | || |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||     
T  24241 aggaactccctcctaaacacagtccaagtaaccacaacaccgtcttgctctaaggtaggtagaagactcacccaccaatcatcagcttcctcagctagca 24142  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || ||||| |||||||| |  ||||||||||| ||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||    
T  24141 tgtgcgtaccaaaacgcaccttttggacctctgaacactgcatcacgcggaacaccctctcaatctccttgagccacgtctgggctccatcagggtcata 24042  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  24041 tcttcccttaaaagt 24027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 3017 - 3224
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| | ||||||||  |||| |||||| | || |||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||  ||    
T  3017 aactctctcctaaacacagcataagtaaccacaacaccgtcttgctctaaggtaggtagaagactaatccaccaatcatcagcttcctcagctagcatat 3116  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
    | ||  |||| || |||||||||||||| |  ||||||||||| ||||||| |||||| ||||| || ||||| |||||||||||||| |||||||||||    
T  3117 gcgttacaaaacgcaccttctggacctctgaacactgcatcacgcggaaaaccctctcaatctctttgagccacgtctgggctccatcagggtcatatct 3216  T
Q  216 tcctttga 223  Q
    ||| ||||    
T  3217 tcccttga 3224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 9736 - 9950
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||||||||||||| |||||||| || |||||||| | ||||||||||||||| || ||||||||||||||||||| |||||||     
T  9736 aggaactccctcctaaacacagcccaagtaaccacagcaccgtcttgctctaaggtaggtagaagactcacacaccaatcatcagcttcctaagctagca 9835  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
       | |||||||| || |||||||| ||||| |  ||||||||||| ||||| | |||||| |||||||| ||||| |||||||||||||| ||||||||    
T  9836 tgcgcgtaccaaaacgcaccttctgaacctctgaacactgcatcacgcggaacaccctctcaatctccttgagccacgtctgggctccatcagggtcata 9935  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  9936 tcttcccttaaaagt 9950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 54987 - 54773
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |||||| | || |||||||| | ||||||||||||||| |||||||| |||||||||||||||||||||     
T  54987 aggaactctctcctaaacacagcccaagtaaccacaacaccatcttgctctaaggtaggtagaagactcacccaccattcatcagcttcctcagctagca 54888  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||  ||||||| |||||||| || || || |  ||||| |||||||| ||||| ||||| |||||||| ||||||||    
T  54887 tatgtgttccaaaacgcaccttctgaccctcagtacactgcataactcgaaacactctctcaatctccttgagccacgtctgagctccatcagggtcata 54788  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  54787 tcttcccttgaaagt 54773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 48518 - 48594
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccacca 89  Q
    |||||||||||| | |||| ||||||||| |||||||| || |||||||| | ||||||||||||||| ||||||||    
T  48518 aggaactctctcctaaacagagcccaagtaaccacagcaccatcttgctctaaggtaggtagaagactcacccacca 48594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28458 - 28302
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||  |||| || |||||||| ||| |||| ||||| ||||||||||||||||||||||    
T  28458 aagtatcttctcaggaactctctcctgaacacaacccaagtcacagcagcaccgtcttgctctaggttaggcagaaggctaacccaccaatcatcagctt 28359  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatca 157  Q
    |||||||||| ||||| ||||| ||||| || ||||||||||||||||||| |||||    
T  28358 cctcagctagttgatgcgtaccgaatcgcactttctggacctcagtgcactccatca 28302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 10395 - 10181
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||||||||||||| ||||||   || |||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||     
T  10395 aggaactccctcctaaacacagcccaagtaaccacattaccatcttgctctaaggtaggtagaagactcacccaccaatcaccagcttcctcagctagca 10296  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||| |  ||||||||||| ||||| |  ||||| |||||||| ||||| |||||||||||||| ||||||||    
T  10295 tgtgcgtaccaaaacgcaccttctgaacctctgaacactgcatcacgcggaacactctctcaatctccttgagccacgtctgggctccatcagggtcata 10196  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  10195 tcttcccttaaaagt 10181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 14873 - 15087
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | ||||||||||| || |||||| | || |||||||| || ||||||||||| || ||||||||||||||||||||||||| ||||     
T  14873 aggaactctctcctaaacacagcccaggtaaccacaacaccatcttgctctagagtaggtagaaggctcacccaccaatcatcagcttcctcaggtagca 14972  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||||| ||||  |||||||| |||||||| |  ||||| ||| | ||||||||  ||||||||||||| ||||||||    
T  14973 tatgcgttccaaaacgcaccttctggacttcagaacactgcattacacggaacactctctcaatcactttaagccacatctgggctccatcagggtcata 15072  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  15073 tcttcccttgaaagt 15087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 12052 - 12266
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | | |||||||||||| |||||| | || |||||||| |  || ||||||||||| |||||||||||||||||||| |||||||||     
T  12052 aggaactctctcctaagcacagcccaagtaaccacaacaccgtcttgctctaaagtgggtagaagactcacccaccaatcatcagcttcttcagctagca 12151  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || ||||||||||| || |  |||||||| |||||||| |  ||||| ||||| || ||||| |||||||||||||| || |||||    
T  12152 tgtgcgtaccaaaacgcaccttctggacttctgaacactgcattacacggaacactctctcaatctctttgagccacgtctgggctccatcaggatcata 12251  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  12252 tcttcccttgaaagt 12266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 4340 - 4554
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| ||||||   || | |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||     
T  4340 aggaactctctcctaaacacaacccaagtaaccacaataccattttgctcaagggtaggtagaagactcacccaccagtcatcagcttcttcagctagca 4439  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||| ||| || |||||||| ||||| |  |||||||||||| | ||||  ||||||||||| || ||||| ||||| |||||||| ||||||||    
T  4440 tgtgggtactaaaacgcaccttctgaacctctgaacactgcatcacatgaaaaactctctctatctctttgagccaagtctgagctccatctgggtcata 4539  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  4540 tcttcccttgaaagt 4554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 30514 - 30300
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||||||||||||| |||||| | || |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||     
T  30514 aggaactccctcctaaacacagcccaagtaaccacaacaccgtcttgctctaaggtaggtagaagactcacccaccaatcatcagcttcctcagctagca 30415  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||  | ||||| |  ||||||||||| ||||| |  ||||| ||||| || ||||| |||| |||||||||| |||||||    
T  30414 tgtgcgtaccaaaacgcacctttcgaacctctgaacactgcatcacgcggaacactctctcaatctctttgagccacgtctaggctccatcgaggtcata 30315  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  30314 tcttcccttgaaagt 30300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 16199 - 16410
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || || || || |||||||| || |||||||||||||| |||||||||||||| |||||||||||||||     
T  16199 aggaactctctcctaaacacagcccaagtaacaactgcaccatcttgctctagagtaggtagaagactcacccaccaatcatcggcttcctcagctagca 16298  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||| ||||| ||||| ||| |||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  16299 tgtgcgtaccaaaacgcaccttctgaacctcggtgcattgcataacatggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 16398  T
Q  213 tcttcctttgaa 224  Q
     ||||| |||||    
T  16399 ccttcccttgaa 16410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 225
Target Start/End: Original strand, 9190 - 9331
Alignment:
Q  84 ccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctcctta 183  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||||||| || |||||||| ||||| ||||||||||  || || ||||||||     
T  9190 ccaccaatcatcagcttcctcagccaactgatgtgtaccaaatcgtaccttctgaacttcagtgcattgcataacacggaaaactctttcaatctccttg 9289  T
Q  184 agccatgtctgggctccatcggggtcatatcttcctttgaaa 225  Q
    ||||| ||||| ||||| || || ||||| ||||||||||||    
T  9290 agccacgtctgtgctccgtctggatcataccttcctttgaaa 9331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 9200 - 9414
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||| |||||  |||||| | || |||||||| | ||||||||||||||| | ||||||||||||||||||||||||||||     
T  9200 aggaactccctcctaaacacagtccaagcaaccacatcaccatcttgctctaaggtaggtagaagactcagccaccaatcatcagcttcctcagctagca 9299  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     |||  |||||||  | |||||||| ||||| |  |||||||||||  |||| |  ||||| |||||||| ||||| |||||||||||||||||||||||    
T  9300 tatgcataccaaaatgcaccttctgaacctctgaacactgcatcacgaggaacactctctcaatctccttgagccacgtctgggctccatcggggtcata 9399  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  9400 tcttcccttaaaagt 9414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 13780 - 13566
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| ||  | || || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||     
T  13780 aggaactctctcctaaacacagcccaagtaacagctgcgccatcttgctctagggtaggtagaagactcacccaccaatcatcagcttcctcagctagca 13681  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || ||| |||| || |||||||| | ||||||||| ||||| ||||||||    ||||| ||||| || |||||||| || |||||||  ||||||||    
T  13680 tgtgcgtaacaaaacgcaccttctgaatctcagtgcattgcataacacggaacgctctctcaatctctttgagccatgtttgagctccattagggtcata 13581  T
Q  213 tcttcctttgaaagt 227  Q
     |||||||| |||||    
T  13580 ccttcctttaaaagt 13566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 9012 - 9226
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||||||  |||| || |||||||| | ||||||||||||||| |||||||||||||||||||| |||||||||     
T  9012 aggaactctctcctaaacacagcccaagtcacagcagcaccatcttgctctaaggtaggtagaagactcacccaccaatcatcagcttcttcagctagca 9111  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||  ||||| |  ||||||||||| || || |  ||||| ||||| || ||||| |||||||||||||| ||||||||    
T  9112 tgtgcgtaccaaaacgcaccttcttaacctctgaacactgcatcacgcgaaacactctctcaatctctttgagccacgtctgggctccatcagggtcata 9211  T
Q  213 tcttcctttgaaagt 227  Q
     ||||| || |||||    
T  9212 acttcccttaaaagt 9226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 1526 - 1314
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctga 114  Q
    |||||||||| | |||||||||||||| || ||| | || || ||||| || |||||||||||||||| ||||||||||||||||| |||| |||||       
T  1526 gaactctctcctaaacacagcccaagtaacaacaacaccatcctgctctagagtaggtagaagactaatccaccaatcatcagctttctcaactagcatg 1427  T
Q  115 tgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatc 214  Q
    || |||||||| || |||||||| |||||||| |||||||| || || || |  ||||| || || || ||||| ||||| |||||||| ||||||||||    
T  1426 tgcgtaccaaaacgcaccttctgaacctcagtacactgcataacccgaaacactctctcaatttctttgagccacgtctgagctccatcagggtcatatc 1327  T
Q  215 ttcctttgaaagt 227  Q
    |||||||||||||    
T  1326 ttcctttgaaagt 1314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 4390 - 4178
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctga 114  Q
    |||||||||| | |||||||||||||| || ||| | || || ||||| || |||||||||||||||| ||||||||||||||||| |||| |||||       
T  4390 gaactctctcctaaacacagcccaagtaacaacaacaccatcctgctctagagtaggtagaagactaatccaccaatcatcagctttctcaactagcatg 4291  T
Q  115 tgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatc 214  Q
    || |||||||| || |||||||| |||||||| |||||||| || || || |  ||||| || || || ||||| ||||| |||||||| ||||||||||    
T  4290 tgcgtaccaaaacgcaccttctgaacctcagtacactgcataacccgaaacactctctcaatttctttgagccacgtctgagctccatcagggtcatatc 4191  T
Q  215 ttcctttgaaagt 227  Q
    |||||||||||||    
T  4190 ttcctttgaaagt 4178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 17492 - 17280
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |||||| | || |||||||| |  |||||||||||||| ||||| || |||||||||||||||||||||     
T  17492 aggaactctctcctaaacacagcccaagtaaccacaacaccatcttgctctaaagtaggtagaagactcacccatcagtcatcagcttcctcagctagca 17393  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||  ||||||| |||||||| || || || |  ||||| ||||| |||||||| ||||| |||||||| ||||||||    
T  17392 tatgcgttccaaaacgcaccttctgaccctcagtacactgcataactcgaaacactctctcaatctcattaagccaagtctgagctccatcagggtcata 17293  T
Q  213 tcttcctttgaaa 225  Q
    | |||| ||||||    
T  17292 ttttcccttgaaa 17280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 718 - 930
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| || |  || || || ||||| || |||||||||||||||| |||||||||||||||||||||||| | ||    
T  718 aggaactctctcataaacacaacccaagtaacaaacgcaccatcctgctctagagtaggtagaagactaatccaccaatcatcagcttcctcagccaact 817  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    |||| ||||||||||| |||||||| |  |||||||| ||||| ||||| ||||  || || |||||||| ||||| ||||| ||||| || || |||||    
T  818 gatgtgtaccaaatcgcaccttctgaatttcagtgcattgcataacacgaaaaactctttcaatctccttgagccacgtctgtgctccgtctggatcata 917  T
Q  213 tcttcctttgaaa 225  Q
     ||||||||||||    
T  918 ccttcctttgaaa 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 70895 - 71108
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| |||||  |||| || || || || ||    |||| || ||| |||||||| ||||||||||| ||||| ||    
T  70895 tcaggaattctctcctgaacacagcccaggtcacagcagcaccatcctgttctagaacgggtaaaacactcacccaccagtcatcagcttcttcagccag 70994  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   |  |||||||| || |||||||| |||||| |||| ||||| || | |||||||||||| | ||| || |||||  |||| |||||||| ||||||    
T  70995 catgtccgtaccaaaccgcaccttctgaacctcactgcattgcatgactctgaaaatcctctcaacctctttgagccacttctgagctccatcagggtca 71094  T
Q  211 tatcttcctttgaa 224  Q
    || || ||||||||    
T  71095 tacctccctttgaa 71108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 13113 - 12902
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | |||||||||||||| || || || || |||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||     
T  13113 aggaactccctcctaaacacagcccaagtaacaactgcaccatcttgctctagggtaggtagaagactcacccaccaatcatcaccttcctcatctagca 13014  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || || ||||| || || || || ||||||||||| ||||| |||||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||    
T  13013 tgtgtgttccaaaacgcacattatgaacctcagtgcattgcataacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcata 12914  T
Q  213 tcttcctttgaa 224  Q
     |||||||||||    
T  12913 ccttcctttgaa 12902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 9637 - 9426
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| || |  || || || ||||| || |||||||||||||||| |||||||||||||||||||||||| | ||    
T  9637 aggaactctctcctaaacacagcccaagtaacaatcgcgccatcctgctctagagtaggtagaagactaatccaccaatcatcagcttcctcagccaact 9538  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
    |||  ||||||||||| |||||||| || ||||| || ||||| ||||||||||  || || |||||||| ||||||| ||| ||||| || || |||||    
T  9537 gatatgtaccaaatcgcaccttctgaacttcagtccattgcataacacggaaaactctttcaatctccttgagccatg-ctgtgctccgtctggatcata 9439  T
Q  213 tcttcctttgaaa 225  Q
      |||||||||||    
T  9438 ctttcctttgaaa 9426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 227
Target Start/End: Original strand, 105027 - 105198
Alignment:
Q  56 cttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcat 155  Q
    ||||||| || |||||||||||||||| |||||||| |||||||||||||||||||   || |||||||| || || ||||| ||||| |||||||||||    
T  105027 cttgctctagagtaggtagaagactaatccaccaataatcagcttcctcagctagcatgtgcgtaccaaaacgcactttctgaacctctgtgcactgcat 105126  T
Q  156 cacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
     |||||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||||||||||||| |||||||    
T  105127 gacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcatatcttcctctgaaagt 105198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 406 - 620
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||| |||||| | ||||||||||| || || || || || |||||||| ||| ||||||||| ||| |||||||||||||||||||| |||||||||     
T  406 aggaattctctcctaaacacagcccatgtaacaactgcaccatcttgctctaggataggtagaatactcacccaccaatcatcagcttcttcagctagca 505  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| ||||||||||| ||||| || |||||||  ||||| ||||| || ||||| ||| | |||||||| || |||||    
T  506 tgtgcgtaccaaaacgcaccttctgtacctcagtgcattgcataacccggaaaactctctcaatctctttgagccacgtccgagctccatcaggatcata 605  T
Q  213 tcttcctttgaaagt 227  Q
    ||||||||| |||||    
T  606 tcttcctttaaaagt 620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 1147 - 933
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | || ||||||||||| |||||||| || |||||||| | ||||||||||||||| |||||||||||| |||||||||| ||||||     
T  1147 aggaactccctcctaaatacagcccaagtaaccacagcaccatcttgctctaaggtaggtagaagactcacccaccaatcaccagcttcctcggctagca 1048  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| || || |  |||| |||||| ||||| |  ||||| |||||||| ||||| |||||||||| ||| ||||||||    
T  1047 tgtgcgtaccaaaacgcaccttctgaacttctgaacactacatcacgcggaacactctctcaatctccttgagccacgtctgggctctatcagggtcata 948  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  947 tcttcccttaaaagt 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 40112 - 39898
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||| ||| | ||||||||||||||||| ||| | || |||||||| |  ||||| |||||||||| |||||||||||||||||||||||| |||     
T  40112 aggaactccctcctaaacacagcccaagtcacaacaacaccatcttgctctaaagtaggcagaagactaatccaccaatcatcagcttcctcagcaagca 40013  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||| |||||| |  |||| |||||| ||||||| |||||| ||||| || ||||| ||||| |||||||  ||||||||    
T  40012 tatgcgttccaaaacgcaccttctagacctctgaacactccatcacgcggaaaaccctctcaatctctttgagccacgtctgagctccataagggtcata 39913  T
Q  213 tcttcctttgaaagt 227  Q
    | |||| ||||||||    
T  39912 tattcccttgaaagt 39898  T

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Target: scaffold0077 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 57170 - 56956
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||| | ||| ||| || || || || |||||||| ||| ||||||||||||||| ||||||||||||| |||||| |||||||     
T  57170 aggaactctctcctaaacaaaaccccagtaacaactgcaccatcttgctctaggataggtagaagactaatccaccaatcatcatcttcctaagctagca 57071  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     |||  ||||||| || |||||||| ||||||||||| ||||| ||| |||| |  ||||| ||||| || ||||| ||||| |||||||| ||||| ||    
T  57070 tatgcataccaaaacgcaccttctgaacctcagtgcattgcataacatggaacactctctcaatctctttgagccacgtctgagctccatcagggtcgta 56971  T
Q  213 tcttcctttgaaagt 227  Q
    |||||||||||||||    
T  56970 tcttcctttgaaagt 56956  T

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Target: scaffold0621 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 806 - 1020
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |||||| | || | |||||| ||||| ||||||||||| |||||||| | ||||||||| |||||||||     
T  806 aggaactctctcctaaacacagcccaagtaaccacaacaccattttgctctagggtcggtagaagactcacccaccagtaatcagcttcttcagctagca 905  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| |||||    |||||||||||||| || |  ||||||||||| || ||||| ||||| |||||||  ||||||||    
T  906 tgtgcgtaccaaaacgcaccttctgaacctctaaacactgcatcacacgaaacactctctctatctctttgagccaagtctgagctccattagggtcata 1005  T
Q  213 tcttcctttgaaagt 227  Q
    | |||| ||||||||    
T  1006 tattcccttgaaagt 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 5223 - 5437
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |||||| | || | |||||| ||||| ||||||||||| |||||||| | ||||||||| |||||||||     
T  5223 aggaactctctcctaaacacagcccaagtaaccacaacaccattttgctctagggtcggtagaagactcacccaccagtaatcagcttcttcagctagca 5322  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || |||||||| || |||||||| |||||    |||||||||||||| || |  ||||||||||| || ||||| ||||| |||||||  ||||||||    
T  5323 tgtgcgtaccaaaacgcaccttctgaacctctaaacactgcatcacacgaaacactctctctatctctttgagccaagtctgagctccattagggtcata 5422  T
Q  213 tcttcctttgaaagt 227  Q
    | |||| ||||||||    
T  5423 tattcccttgaaagt 5437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 16038 - 15824
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | ||||||||||||||||| ||| | || |||||||| ||   |||||||||||| | ||||||||||||||||||||||||||||     
T  16038 aggaactctctcctaaacacagcccaagtcacaacaacaccatcttgctctagaacaggtagaagactgatccaccaatcatcagcttcctcagctagca 15939  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || ||||| || || |||||||| ||||| |  |||||||| ||  | || |  ||||||||||| || ||||| ||||| |||||||||||||||||    
T  15938 tgtgcgtaccgaaacgcaccttctgaacctctgatcactgcataacctgaaacactctctctatctctttgagccacgtctgagctccatcggggtcata 15839  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  15838 tcttcccttaaaagt 15824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 8820 - 8651
Alignment:
Q  58 tgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatca 157  Q
    ||||| ||| ||||||||| ||| |||||||| |||||||||||||||||||||   || |||||||| || |||||||| |||||| |||| ||||| |    
T  8820 tgctctaggataggtagaatactcacccaccagtcatcagcttcctcagctagcatgtgcgtaccaaagcgcaccttctgaacctcattgcattgcataa 8721  T
Q  158 cacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | |||||||||||||| ||||| || ||||| ||||| ||| |||| || ||||| ||||||||||||||    
T  8720 ctcggaaaatcctctcaatctctttgagccacgtctgagctacatctggatcataccttcctttgaaagt 8651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 4082 - 3848
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||| | |||||||||||  | |||||||||||||| |||||| | || | |||||  ||||||||||||||||| |||||||| ||||||||||    
T  4082 aagtatctctttaggaactctcttctaaacacagcccaagtaaccacaacaccattttgctatagggtaggtagaagactcacccaccagtcatcagctt 3983  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaa-aatc-------ctctctatctccttaagccatgtc 192  Q
    | |||||||||   ||  ||||||| || |||||||| ||||| |  |||||||||||||| || | ||       ||||||||||| || ||||| |||    
T  3982 cttcagctagcatgtgcataccaaaacgcaccttctgtacctctgaacactgcatcacacgaaacactctctcactctctctatctctttgagccaagtc 3883  T
Q  193 tgggctccatcggggtcatatcttcctttgaaagt 227  Q
    || ||||||||||||||||||||||| ||||||||    
T  3882 tgagctccatcggggtcatatcttcccttgaaagt 3848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 227
Target Start/End: Original strand, 6902 - 7114
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctga 114  Q
    |||||||||| | |||||||||||||| || || |  || |||||||| ||| || |||||| ||| |||||||||||||||||||||||||||| |       
T  6902 gaactctctcctaaacacagcccaagtaacaactgaaccatcttgctctaggatatgtagaacactcacccaccaatcatcagcttcctcagctaacatg 7001  T
Q  115 tgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatc 214  Q
    || ||||| || || |||||||| |||| |||||| ||||| |  || ||||||||||| ||||| || ||||| ||||| |||||||| |||||||| |    
T  7002 tgcgtaccgaaacgcaccttctgaacctaagtgcattgcataatccgaaaaatcctctcaatctctttgagccacgtctgagctccatcagggtcatacc 7101  T
Q  215 ttcctttgaaagt 227  Q
    |||| ||||||||    
T  7102 ttcccttgaaagt 7114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 4331 - 4545
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||||||||||| |||||| | || |||||||| |  |||||||||||||| |||||||| ||||||||||||||| |||||     
T  4331 aggaactctctcctaaacacagcccaagtaaccacaacaccatcttgctctaaagtaggtagaagactcacccaccagtcatcagcttcctcacctagca 4430  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
     ||| || ||||| || ||||||||  ||||||| |||||||| || || || ||  |||| ||||  || ||||| ||||| |||| ||| || |||||    
T  4431 tatgcgttccaaaacgcaccttctgtccctcagtacactgcataactcgaaacattatctcaatctatttgagccaagtctgagctctatcaggttcata 4530  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| ||||||||    
T  4531 tcttcccttgaaagt 4545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 7662 - 7798
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| || || || || |||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||||||     
T  7662 aggaactctctcctaaacacaacccaagtaacaactgcaccatcttgctctaggataggtagaagactaatccaccaatcatcaacttcctcagctagca 7761  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgca 149  Q
      || |||||||| || |||||||| |||||||||||    
T  7762 tgtgcgtaccaaaacgcaccttctgaacctcagtgca 7798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 14792 - 14928
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| || || || || |||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||||||     
T  14792 aggaactctctcctaaacacaacccaagtaacaactgcaccatcttgctctaggataggtagaagactaatccaccaatcatcaacttcctcagctagca 14891  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgca 149  Q
      || |||||||| || |||||||| |||||||||||    
T  14892 tgtgcgtaccaaaacgcaccttctgaacctcagtgca 14928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 227
Target Start/End: Original strand, 442443 - 442655
Alignment:
Q  15 gaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctga 114  Q
    |||||||||  | |||||||||||||| || ||  | ||| | ||||  ||| |||||| || ||| ||||||||||||||||||||||||||||||       
T  442443 gaactctcttctaaacacagcccaagtaacaactccacctccgtgctataggataggtaaaatactcacccaccaatcatcagcttcctcagctagcatg 442542  T
Q  115 tgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatc 214  Q
    || |||||||| || |||||||| |||||| || |  |||| || |||||||||||||| | ||| || ||||| ||||| |||||||| || ||||| |    
T  442543 tgtgtaccaaagcgcaccttctgaacctcattgtatggcataacccggaaaatcctctcaacctctttgagccacgtctgagctccatctggatcatacc 442642  T
Q  215 ttcctttgaaagt 227  Q
    |||||||||||||    
T  442643 ttcctttgaaagt 442655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 167696 - 167494
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| | || ||||||||||| || ||||| || |||||||| |||  ||||||||||||||||||||| ||||||||||||| |||||||   |    
T  167696 aactctctcctaaatacagcccaagtaacaacagcaccatcttgctctaggacaggtagaagactaacccaccagtcatcagcttccttagctagcatgt 167597  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
    | || || || || |||||| | |||||  | ||||| ||||| | ||| |||||||| ||||| || |||||  |||| |||||||| ||||| || ||    
T  167596 gcgtgccgaaccgcaccttccgcacctcgctacactgaatcactctgaagatcctctcaatctctttgagccacttctgagctccatcagggtcgtacct 167497  T
Q  216 tcc 218  Q
    |||    
T  167496 tcc 167494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 332 - 119
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| |||||||||||||||||||||| || || || || |||||   | |||  ||||| |||||||| |||||||||||||||||||     
T  332 tcaggaattctctcctgaacacagcccaagtcaccaccgcaccgtcctgttcaagcacatgtaacagacttacccaccagtcatcagcttcctcagctaa 233  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| || |||||||| || |||||||| | ||| || | |||||| || || |  |||||||||||  |||| |||||||||||||||    
T  232 catgtgcgtcccaaaccgcaccttctgcacttcagtgcattacataaccctgaaaattctttcaacttccttaagccacttctgagctccatcggggtca 133  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  132 taccttcctttgaa 119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 14515 - 14304
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgat 115  Q
    ||||||||| | |||||||||||||| || ||  | ||| | ||||| ||| ||||||||| ||| |||||||| ||||||||||||| |||||||   |    
T  14515 aactctctcctaaacacagcccaagtaacaactccacctccgtgctctaggataggtagaatactcacccaccagtcatcagcttccttagctagcatgt 14416  T
Q  116 gagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatct 215  Q
    | |||||||| |  |||||||| |||||| |||| |||||  | || ||||||||||  ||||| || |||||  |||| |||||||| || ||||| ||    
T  14415 gtgtaccaaagcacaccttctgaacctcattgcattgcatacctcgtaaaatcctcttaatctctttgagccacatctgagctccatctggatcatacct 14316  T
Q  216 tcctttgaaagt 227  Q
    ||||||||||||    
T  14315 tcctttgaaagt 14304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 30411 - 30627
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| | |||| ||||||||||||||||||||||||| || || ||||||||   |||||  ||||| |||||||| |||||||||||||||||||     
T  30411 tcaggaattttctcctgaacacagcccaagtcaccacagcaccatcctgctcaagcacaggtaacagacttacccaccagtcatcagcttcctcagctaa 30510  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || ||||| || || ||| |||| ||||| |  |||||||| || | |||||| || || | |||||| |||||  |||| ||||| ||  |||||    
T  30511 catgtgcgtaccgaaccgcaccatctgcacctccgaacactgcataactctgaaaattctttcaacctccttgagccacttctgagctccgtcatggtca 30610  T
Q  211 tatcttcctttgaaagt 227  Q
    || ||||||||||||||    
T  30611 taccttcctttgaaagt 30627  T

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Target: scaffold0040 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 18634 - 18830
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | ||||||| |||||| || || || |  |||||||| ||| ||||||||| ||| ||||||||||||||||| ||||| ||||||     
T  18634 aggaactctctcctaaacacagtccaagtaacaactgcactatcttgctctaggataggtagaatactcacccaccaatcatcagcctcctcggctagca 18733  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtc 209  Q
      || |||||||| || |||||||| |||||| |||| || || ||  ||||||  ||||| ||||| || ||||| ||||| |||||||| |||||    
T  18734 tgtgcgtaccaaaacgcaccttctgcacctcattgcattggataaccaggaaaactctctcaatctctttgagccacgtctgtgctccatcagggtc 18830  T

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Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 110416 - 110324
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagc 111  Q
    |||||| | |||||||||||||| || ||| | || |||||||| ||   |||||||||||||  ||||||||||||| |||||||| |||||    
T  110416 tctctcctaaacacagcccaagtaacaacaacaccatcttgctctagtacaggtagaagactagtccaccaatcatcaacttcctcaactagc 110324  T

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Target: scaffold0476 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 11555 - 11769
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    ||||||| |||| | ||||| ||| |||| |||||| | || |||||||| | ||||||||||||||| |||||||||||| ||||||||||| |||||     
T  11555 aggaactttctcctaaacactgcctaagtaaccacaacaccatcttgctctaaggtaggtagaagactcacccaccaatcaccagcttcctcaactagca 11654  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcata 212  Q
      || || |||||  | ||||||||  ||| |||||||||||| || |  || |  ||| ||||||| || ||||| ||||  |||||||| ||||||||    
T  11655 tgtgcgttccaaaatgcaccttctgagccttagtgcactgcataactctaaacactctccctatctctttgagccacgtctaagctccatcagggtcata 11754  T
Q  213 tcttcctttgaaagt 227  Q
    |||||| || |||||    
T  11755 tcttcccttaaaagt 11769  T

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Target: scaffold0012 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 215935 - 215837
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagc 111  Q
    |||||||||||| | |||||||||||||| ||  | || || |||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  215935 aggaactctctcctaaacacagcccaagtaacagctgcaccgtcttgctatagggtaggtagaagattcacccaccaatcatcagcttcctcagctagc 215837  T

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Target: scaffold0054 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 63048 - 62879
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| ||||||||||||| ||||||||||| || ||||| || ||    |||| |||||| |||||||||||||||||||| ||||||| |   || |    
T  63048 tctctcctgaacacagcccatgtcaccacagcaccatcttgttcgagcacgggtaaaagacttacccaccaatcatcagcttcttcagctaacatgtgcg 62949  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagcca 188  Q
    ||||||| || |||||||| || ||| |||||||||| || | |||||| ||||| | |||||| |||||    
T  62948 taccaaaccgcaccttctgcacttcactgcactgcatgactctgaaaattctctcaacctccttgagcca 62879  T

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Target: scaffold0053 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 62281 - 62076
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| ||||||||||||| ||||||||| | || || || |||||    |||| | |||| |||||||| |||||||| || ||||||| |   || |    
T  62281 tctctcctgaacacagcccaggtcaccacaacaccatcctgttcaagcacgggtaaaggacttacccaccagtcatcagcctcttcagctaacatgtgcg 62182  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcc 218  Q
    |||||||||| |||||||| |||||| |||||||||| || | |||||||||| | | |||||| |||||  |||| ||||| || |||||||| || ||    
T  62181 taccaaatcgcaccttctgcacctcactgcactgcatgactctgaaaatcctcacaacctccttgagccacttctgagctccgtcagggtcatacctccc 62082  T
Q  219 tttgaa 224  Q
    ||||||    
T  62081 tttgaa 62076  T

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Target: scaffold0161 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 36637 - 36784
Alignment:
Q  78 actaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatc 177  Q
    ||||||||||||||||| ||||||||| ||||||   || |||||||| || ||||||||||| ||| |||| ||||| || ||||| || ||||||| |    
T  36637 actaacccaccaatcataagcttcctcggctagcatgtgcgtaccaaaacgcaccttctggacttcattgcattgcataactcggaagattctctctacc 36736  T
Q  178 tccttaagccatgtctgggctccatcggggtcatatcttcctttgaaa 225  Q
    || || ||||| |  || |||||||| || ||||| ||||||||||||    
T  36737 tctttgagccacgattgagctccatctggatcataccttcctttgaaa 36784  T

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Target: scaffold0575 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 10408 - 10550
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagct 112  Q
    |||||||||||| | |||||| ||||||| |||||| | || |||||||| |  |||||||||||||  ||||| || ||||||||||||| |||||||     
T  10408 aggaactctctcctaaacacaacccaagtaaccacaacaccatcttgctctaaagtaggtagaagacacacccatcagtcatcagcttccttagctagca 10507  T
Q  113 gatgagtaccaaatcgtaccttctggacctcagtgcactgcat 155  Q
     ||| || ||||| || ||||||||  ||||||| ||||||||    
T  10508 tatgcgttccaaaacgcaccttctgaccctcagtacactgcat 10550  T

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Target: scaffold0848 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 4528 - 4315
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    |||| ||||||||| | |||||| ||||||| || ||||  || |||||||| |||   ||||||||||||| |||||| ||||||||||||||||||||    
T  4528 tcagaaactctctcctaaacacaacccaagtaacaacagtaccatcttgctctaggacgggtagaagactaatccaccagtcatcagcttcctcagctag 4429  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || || || || ||||| || |||||  | |||||||| || | ||| |||||||| ||||| || |||||  |||| |||||||| |||||     
T  4428 catgtgcgtgccgaaccgcaccttttgcacctcgctacactgcataactctgaagatcctctcaatctctttgagccacttctgagctccatcagggtcg 4329  T
Q  211 tatcttcctttgaa 224  Q
    || ||||| |||||    
T  4328 taccttcccttgaa 4315  T

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Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 320030 - 320243
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || || || |||||   |||||  ||||| |||||||| ||||| || |||||||||||    
T  320030 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcatgttcaagcacaggtaacagacttacccaccagtcatctgcctcctcagctag 320129  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || || || || ||||| || |||||||  || ||||| || | ||| |||||||| |  |||||||||||  ||||||| ||||| || |||    
T  320130 catgtgtgttccgaaccgcaccttttgcacctcagaacattgcataaccctgaagatcctctccacttccttaagccacttctgggcaccatcaggatca 320229  T
Q  211 tatcttcctttgaa 224  Q
    || |||||||||||    
T  320230 taccttcctttgaa 320243  T

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Target: scaffold0230 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 226
Target Start/End: Complemental strand, 17817 - 17661
Alignment:
Q  70 ggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcc 169  Q
    ||||||| ||| ||||||||||||||||||||||| |||| |   || |||||||| || |||||||| |||||| |||| ||||| || ||||||||||    
T  17817 ggtagaacactcacccaccaatcatcagcttcctccgctaacatgtgcgtaccaaagcgcaccttctgaacctcattgcattgcatgacccggaaaatcc 17718  T
Q  170 tctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaag 226  Q
    | || |  || || ||||| ||||| |||||||| || ||||  ||||| |||||||    
T  17717 tttcaacttctttgagccacgtctgagctccatcaggatcatgccttcccttgaaag 17661  T

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Target: scaffold0058 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 224
Target Start/End: Original strand, 16209 - 16421
Alignment:
Q  12 caggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagc 111  Q
    |||||| || ||| ||||||||||||| |||||||| || |  || | ||||||    ||||| ||||| ||||||||||||||||| ||||| ||||||    
T  16209 caggaattccctcctgaacacagcccaggtcaccaccgcactgtcctactcaagtacgggtagcagacttacccaccaatcatcagcctcctccgctagc 16308  T
Q  112 tgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcat 211  Q
       |  || ||||| || ||||| || || |||| ||||||||| || | |||||||||||| | |||||| ||||||||||| || ||||| || ||||    
T  16309 atgtacgtcccaaaccgcaccttttgtacttcagagcactgcatgactctgaaaatcctctccacctcctttagccatgtctgagcaccatctggatcat 16408  T
Q  212 atcttcctttgaa 224  Q
    | ||||| |||||    
T  16409 accttcccttgaa 16421  T

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Target: scaffold0324 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 2636 - 2715
Alignment:
Q  148 cactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||||||| || |||||    
T  2636 cactgcatcacacggaaaatcctctcaatctctttgagccacgtttgagctccatcagggtcatatcttcccttaaaagt 2715  T

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Target: scaffold1061 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 270 - 360
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    |||||| |||||||||||||||||||||||||||| || || || ||   |||||  | ||| ||||||||||||||||||||||||||||    
T  270 tctctcctgaacacagcccaagtcaccacagctccatcctgttccagcacaggtaacaaacttacccaccaatcatcagcttcctcagcta 360  T

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Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 217
Target Start/End: Complemental strand, 400 - 194
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||| | ||||||||||||| |||||||| |  || || || |||||   |||||  ||||| |||||||| |||||||||||||||||||     
T  400 tcaggaattctcacctgaacacagcccaggtcaccaccgtaccatcctgttcaagcacaggtaacagacttacccaccagtcatcagcttcctcagctaa 301  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| || |||||||| |||||| |||||||||| || | |||||| || || | |||||| |||||  |||| ||||| || ||||||    
T  300 catgtgtgtcccaaaccgcaccttctgtacctcactgcactgcataactctgaaaattctttcaacctccttgagccacttctgagctccgtcagggtca 201  T
Q  211 tatcttc 217  Q
    || ||||    
T  200 taccttc 194  T

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Target: scaffold0434 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 5419 - 5203
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    ||||||| |||||| ||||||||||||| ||||||||||| || || |  |||||   |||||  ||||| |||||||| ||||||||||| |||||||     
T  5419 tcaggaattctctcctgaacacagcccaggtcaccacagcaccatcctcttcaagcacaggtaacagacttacccaccagtcatcagcttcttcagctaa 5320  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || || ||||| || |||||||| || ||| |||| ||||| || | ||||||||| || | |||||| |||||  |||| ||||| ||  |||||    
T  5319 catgtgcgtcccaaaccgcaccttctgcacttcactgcattgcataactctgaaaatcctttcaacctccttgagccacttctgagctccgtcaaggtca 5220  T
Q  211 tatcttcctttgaaagt 227  Q
    || || ||||| |||||    
T  5219 tacctccctttaaaagt 5203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 32899 - 32676
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||| || |||||||||||| || |||||||||||||||| ||||||||||| || ||||| ||  |||| |  | ||| | ||||||||||||||| |    
T  32899 aagtacctactcaggaactctttcctgaacacagcccaagttaccacagctccatcctgctccagcataggcaacatacttatccaccaatcatcagcct 32800  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    | || |||| |   || || ||||| || ||||| || ||||| |  || ||||| || | |||||| || || | ||||||||||||  ||||||| ||    
T  32799 cttccgctaacatgtgcgtcccaaaccgcaccttttgcacctctgaacattgcatgaccctgaaaattctttcaacctccttaagccacttctgggcacc 32700  T
Q  201 atcggggtcatatcttcctttgaa 224  Q
    ||| || |||||||| ||||||||    
T  32699 atcaggatcatatctacctttgaa 32676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 52882 - 52727
Alignment:
Q  69 aggtagaagactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatc 168  Q
    |||||| | ||| |||||||| ||||| || ||||||||||||   || || ||||| |||||||| || ||||| |  |||||||| || | |||||||    
T  52882 aggtagcaaacttacccaccagtcatctgcctcctcagctagcatgtgcgttccaaaccgtaccttttgcacctctgaacactgcatgaccctgaaaatc 52783  T
Q  169 ctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaa 224  Q
    ||||| |  |||||||||||  ||||||| |||||||| ||||| ||||| |||||    
T  52782 ctctccacttccttaagccacttctgggcaccatcgggatcataccttcccttgaa 52727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 389 - 291
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| |||||| ||||||||||||| |||||||||||||| || || || ||   |||||  | ||| |||||||| |||||||||||||||||||    
T  389 tcaggaattctctcctgaacacagcccaggtcaccacagctccatcctgttccagcacaggtaacaaacttacccaccagtcatcagcttcctcagcta 291  T

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Target: scaffold1600 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 911 - 1060
Alignment:
Q  78 actaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatc 177  Q
    |||||||||||||||||||| |||||| ||||||   || |||| ||| || |||||||| || ||| |||| ||||| || || ||||| || || | |    
T  911 actaacccaccaatcatcagtttcctctgctagcatgtgcgtactaaagcgcaccttctgaacttcattgcattgcatgacccgtaaaattctttcaacc 1010  T
Q  178 tccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    || || ||||| ||||  ||||||||  ||||||| ||||||||||||||    
T  1011 tctttgagccacgtctcagctccatcatggtcataccttcctttgaaagt 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 6232 - 6437
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| |||||||||||||||||||  ||||  | || || |||||    |||| |||||| |||||||||||||| || || ||||||| |   || |    
T  6232 tctctcctgaacacagcccaagtcacagcagcagcatcctgttcaagcacgggtaaaagactcacccaccaatcatctgcctcttcagctaacatgtgtg 6331  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcc 218  Q
    ||||||| || |||||||  |||||  |||| ||||| || | |||||||||||| | ||| || |||||| |||| |||||||| ||| |||| || ||    
T  6332 taccaaaccgcaccttctccacctcgctgcattgcatgactctgaaaatcctctcaacctctttgagccatttctgagctccatcagggccatacctccc 6431  T
Q  219 tttgaa 224  Q
    ||||||    
T  6432 tttgaa 6437  T

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Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 30313 - 30526
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctag 110  Q
    |||| ||||||||| ||||||||||||| ||||| ||| | || ||||| || ||  | | || |||||| |||||||| ||||| || || | ||| ||    
T  30313 tcagaaactctctcctgaacacagcccaggtcacaacaacaccatcttgttctagaatcgataaaagactcacccaccagtcatctgcctctttagccag 30412  T
Q  111 ctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtca 210  Q
    |   || |||||||| |  |||||||| |||||| |||||||||||||   ||| |  ||||| | |||||| |||||  ||||||||||||| ||||||    
T  30413 catgtgcgtaccaaaccccaccttctgcacctcactgcactgcatcaccatgaagactctctcaacctccttgagccacttctgggctccatcagggtca 30512  T
Q  211 tatcttcctttgaa 224  Q
    || || ||||||||    
T  30513 tacctccctttgaa 30526  T

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Target: scaffold0751 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 5975 - 6179
Alignment:
Q  19 tctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagctagctgatgag 118  Q
    |||||| ||||||||||||| ||||||||||| || || || |||||    |||| |||||| |||||||||||||| || || ||||||| |   ||      
T  5975 tctctcctgaacacagcccaggtcaccacagcaccatcctgttcaagcacgggtaaaagacttacccaccaatcatctgcctcttcagctaacatgtgtc 6074  T
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcc 218  Q
    ||||||| || |||||||  |||||| | || || || || | |||||||||||| | ||| || |||||  |||| |||||||| |||||||| || ||    
T  6075 taccaaaccgcaccttctacacctcactacattggataactctgaaaatcctctcaacctctttgagccacttctgagctccatcagggtcatacctccc 6174  T
Q  219 tttga 223  Q
    |||||    
T  6175 tttga 6179  T

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Target: scaffold0671 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3726 - 3836
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  |||||||||||||| | ||||||||||| || || ||  | ||| | ||||| | |  |||| ||| |||||||||||||||||||||||    
T  3726 aagtatctgttcaggaactctctcctaaacacagcccaggtaacaactccacctccgtgctctaagacaggttgaatactaacccaccaatcatcagctt 3825  T
Q  101 cctcagctagc 111  Q
    |||| ||||||    
T  3826 cctctgctagc 3836  T

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Target: scaffold0429 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 949 - 723
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagctt 100  Q
    ||||||||  ||| |||||||||| | |||||| ||||||| || ||  | ||| | ||||| | | ||||| ||| |||||||||||||||||||||||    
T  949 aagtatctgttcaagaactctctcctaaacacaacccaagtaacaactccacctccgtgctctaagataggttgaatactaacccaccaatcatcagctt 850  T
Q  101 cctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctcc 200  Q
    || | |||| |   || |||||||| || |||||||| || ||| | || ||||| || || ||||| |  || ||||| || ||||| |  |  |||||    
T  849 ccaccgctaacatgtgcgtaccaaagcgcaccttctgaacttcattacattgcatgacccgaaaaattcgttcaatctctttgagccacgattaagctcc 750  T
Q  201 atcggggtcatatcttcctttgaaagt 227  Q
    ||| |||||||||||||| ||||||||    
T  749 atcagggtcatatcttcccttgaaagt 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 116411 - 116509
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    ||||||| |||||| ||||||||||||| |||||| |||| || || ||||||||   |||||  ||||| |||||||  ||||||||||| |||||||    
T  116411 tcaggaattctctcctgaacacagcccaggtcacctcagcaccatcctgctcaagcacaggtaacagacttacccaccggtcatcagcttcttcagcta 116509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 8451 - 8560
Alignment:
Q  118 gtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttc 217  Q
    |||||||| || |||||||| |||||| |||| ||||| || | |||||| || || | |||||| |||||  |||| |||||||| || |||||||| |    
T  8451 gtaccaaaccgcaccttctgcacctcactgcattgcatgactctgaaaattctttcaacctccttgagccacttctgagctccatcaggatcatatctac 8550  T
Q  218 ctttgaaagt 227  Q
    ||||||||||    
T  8551 ctttgaaagt 8560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 6929 - 7062
Alignment:
Q  82 acccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctcct 181  Q
    ||||||||||||||||| |||||||| | |  ||| |||||||| || ||||||||   | |||| |||||||| || || || |||||||| | ||| |    
T  6929 acccaccaatcatcagcctcctcagccaacatatgcgtaccaaagcgcaccttctgaggcacagtacactgcataacccgaaagatcctctcaacctcat 7028  T
Q  182 taagccatgtctgggctccatcggggtcatatct 215  Q
    | |||||||| || |||||||| || ||||||||    
T  7029 tgagccatgtttgagctccatcaggatcatatct 7062  T

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Target: scaffold0169 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 35592 - 35516
Alignment:
Q  151 tgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||| |||||||| |  ||||| ||||| || ||||| ||||| |||||||| ||||| |||||||||||||||||    
T  35592 tgcataacacggaacactctctcaatctctttgagccacgtctgagctccatcagggtcgtatcttcctttgaaagt 35516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 12256 - 12407
Alignment:
Q  76 agactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctcta 175  Q
    ||||||| ||||||||||||||| || |||||||||   || || ||||| || ||||| || |||||||  |||||||| || | ||| ||||| || |    
T  12256 agactaatccaccaatcatcagcctcttcagctagcatgtgcgtcccaaaccgcaccttttgaacctcagaacactgcatgaccctgaatatcctttcaa 12355  T
Q  176 tctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    ||||||| |||||| |||| || || || || ||||| || || ||||||||    
T  12356 tctccttcagccatttctgagcaccgtcaggatcatacctacccttgaaagt 12407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 7532 - 7453
Alignment:
Q  148 cactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    |||||||||||| |||| |  ||||  ||||| || ||||| ||||| |||||||| |||||||||||||| ||||||||    
T  7532 cactgcatcacatggaacactctctgaatctctttgagccacgtctgagctccatcagggtcatatcttcccttgaaagt 7453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 3816 - 3737
Alignment:
Q  16 aactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatc 95  Q
    ||||||||||||||||||||||| |||||  |||| || |||||||||||    |||| |||||| |||||||| |||||    
T  3816 aactctctcttgaacacagcccaggtcacagcagcaccatcttgctcaagaacgggtaaaagacttacccaccagtcatc 3737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 26357 - 26460
Alignment:
Q  121 ccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcctt 220  Q
    ||||| || |||||||| ||||| |  |||||||| || | |||||| || || | ||||||||||||| ||||||| ||||| || |||||||| ||||    
T  26357 ccaaaccgcaccttctgcacctctgaacactgcatgaccctgaaaattctttcaacctccttaagccatttctgggcaccatcaggatcatatctacctt 26456  T
Q  221 tgaa 224  Q
    ||||    
T  26457 tgaa 26460  T

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Target: scaffold0190 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21822 - 21773
Alignment:
Q  1 aagtatctcctcaggaactctctcttgaacacagcccaagtcaccacagc 50  Q
    ||||| || |||||||||||| || |||||| ||||||||||||||||||    
T  21822 aagtacctactcaggaactctttcctgaacatagcccaagtcaccacagc 21773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 16832 - 16937
Alignment:
Q  119 taccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatctccttaagccatgtctgggctccatcggggtcatatcttcc 218  Q
    ||||||| || |||||||| |||||| |||| ||||| || | |||||||||||| | ||| || |||||  |||| ||||||||  ||||||| || ||    
T  16832 taccaaaccgcaccttctgaacctcactgcattgcatgactctgaaaatcctctcaacctctttgagccacttctgagctccatcatggtcatacctccc 16931  T
Q  219 tttgaa 224  Q
    ||||||    
T  16932 tttgaa 16937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 2020 - 1884
Alignment:
Q  76 agactaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctcta 175  Q
    ||||| |||||||| ||||| ||||| ||||| | |  ||| |||||||| || |||||||| |||||  | ||||||||||| | ||| |  ||||| |    
T  2020 agactcacccaccagtcatctgcttcttcagccaacatatgcgtaccaaaccgcaccttctgcacctcgctacactgcatcaccctgaagactctctcaa 1921  T
Q  176 tctccttaagccatgtctgggctccatcggggtcata 212  Q
     |||||| |||||  |||| |||||||| ||||||||    
T  1920 cctccttgagccacttctgagctccatcagggtcata 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 5877 - 5973
Alignment:
Q  13 aggaactctctcttgaacacagcccaagtcaccacagctccttcttgctcaagggtaggtagaagactaacccaccaatcatcagcttcctcagcta 109  Q
    |||||||||||| | ||||||||| | || || ||  | ||| | ||||| ||| | ||| ||| ||||||||||||||||||||||||||| ||||    
T  5877 aggaactctctcctaaacacagcctaggtaacaactccacctccgtgctctaggatcggttgaatactaacccaccaatcatcagcttcctctgcta 5973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 2605 - 2753
Alignment:
Q  79 ctaacccaccaatcatcagcttcctcagctagctgatgagtaccaaatcgtaccttctggacctcagtgcactgcatcacacggaaaatcctctctatct 178  Q
    ||||||||| |||||||||||| ||| |||| |   || |||||||| || |||||||| || ||| |||| ||||| || || ||||| || || |  |    
T  2605 ctaacccacaaatcatcagctttctccgctaacatgtgtgtaccaaaacgcaccttctgaacttcactgcattgcatgacccgaaaaattctttcaactt 2704  T
Q  179 ccttaagccatgtctgggctccatcggggtcatatcttcctttgaaagt 227  Q
    | || ||||| | ||| |||||||| || ||||| ||||||||||||||    
T  2705 ctttgagccacgactgagctccatctggatcataccttcctttgaaagt 2753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 7979 - 7943
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccac 47  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  7979 tcaggaattctctcctgaacacagcccaagtcaccac 7943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 18193 - 18157
Alignment:
Q  11 tcaggaactctctcttgaacacagcccaagtcaccac 47  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  18193 tcaggaattctctcctgaacacagcccaagtcaccac 18157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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