View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8912A_low_434 (Length: 202)
Name: NF8912A_low_434
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8912A_low_434 |
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Alignment Details
Target: chr1 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 48684426 - 48684587
Alignment:
| Q |
22 |
ttagttccaaggtgttcagtggccttgacatcccatattggatgcacaacaaggacaaagaaagaaaaataaggaagaagtttaagtattggtgttttcc |
121 |
Q |
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| T |
48684426 |
ttagttccaaggtgttcagtggccttgacatcccatattggatgcacaacaaggacaaagaaagaaaaataaggaagaagttaaagtattggtgttttcc |
48684525 |
T |
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| Q |
122 |
aaccatgactattgtagtatttaggtttggagatatgtatgattttggttattgagaataat |
183 |
Q |
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| T |
48684526 |
aaccatgactattgtagtatttaggtttggagatatgtatgattttggttattgagaataat |
48684587 |
T |
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