View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_435 (Length: 202)

Name: NF8912A_low_435
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_435
NF8912A_low_435
[»] chr4 (37 HSPs)
chr4 (27-181)||(51948388-51948542)
chr4 (119-181)||(9241039-9241101)
chr4 (119-181)||(19238591-19238653)
chr4 (119-181)||(28635696-28635758)
chr4 (119-181)||(37720228-37720290)
chr4 (119-168)||(51250549-51250598)
chr4 (118-181)||(55427214-55427277)
chr4 (119-181)||(37109365-37109427)
chr4 (119-168)||(27965537-27965586)
chr4 (117-181)||(39509068-39509132)
chr4 (119-166)||(37443702-37443749)
chr4 (119-181)||(47044717-47044779)
chr4 (119-182)||(12798684-12798747)
chr4 (119-173)||(1730511-1730565)
chr4 (119-181)||(17618281-17618343)
chr4 (119-181)||(21660158-21660220)
chr4 (119-181)||(21668922-21668984)
chr4 (119-173)||(29195095-29195149)
chr4 (119-181)||(31759672-31759734)
chr4 (119-181)||(31826609-31826671)
chr4 (119-181)||(33619206-33619268)
chr4 (139-181)||(38869788-38869830)
chr4 (123-168)||(24234649-24234694)
chr4 (116-173)||(38206147-38206204)
chr4 (119-176)||(46545711-46545768)
chr4 (122-178)||(41346980-41347036)
chr4 (119-181)||(37274473-37274536)
chr4 (126-181)||(49576908-49576963)
chr4 (122-176)||(7292817-7292871)
chr4 (119-181)||(7949468-7949530)
chr4 (119-181)||(8030218-8030280)
chr4 (119-181)||(24827825-24827887)
chr4 (139-181)||(30938233-30938275)
chr4 (118-176)||(2622414-2622476)
chr4 (118-167)||(20608921-20608970)
chr4 (126-175)||(29312272-29312321)
chr4 (121-181)||(40284000-40284060)
[»] chr3 (53 HSPs)
chr3 (119-181)||(31520619-31520681)
chr3 (116-182)||(31788983-31789049)
chr3 (119-182)||(36720381-36720444)
chr3 (126-181)||(2667869-2667924)
chr3 (119-182)||(46518628-46518691)
chr3 (119-181)||(10499123-10499185)
chr3 (119-177)||(51903896-51903954)
chr3 (119-176)||(4222141-4222198)
chr3 (120-181)||(47454631-47454692)
chr3 (126-181)||(4844525-4844580)
chr3 (126-181)||(4870221-4870276)
chr3 (119-166)||(16991542-16991589)
chr3 (119-181)||(8051214-8051276)
chr3 (119-181)||(21960551-21960613)
chr3 (119-181)||(30311306-30311368)
chr3 (119-181)||(53956384-53956446)
chr3 (119-176)||(14339610-14339667)
chr3 (119-175)||(5499427-5499483)
chr3 (119-181)||(10445153-10445216)
chr3 (117-176)||(16354911-16354970)
chr3 (122-181)||(30510213-30510272)
chr3 (119-181)||(2597234-2597296)
chr3 (119-181)||(7975418-7975480)
chr3 (119-165)||(9832497-9832543)
chr3 (119-181)||(27093375-27093437)
chr3 (122-176)||(28928898-28928952)
chr3 (119-173)||(53863889-53863943)
chr3 (119-168)||(203090-203139)
chr3 (119-176)||(27923062-27923119)
chr3 (119-176)||(30232330-30232387)
chr3 (119-179)||(9557320-9557380)
chr3 (119-167)||(32638945-32638993)
chr3 (121-173)||(42799769-42799821)
chr3 (118-153)||(24459989-24460024)
chr3 (143-182)||(27259185-27259224)
chr3 (142-181)||(28531072-28531111)
chr3 (146-181)||(44743869-44743904)
chr3 (143-181)||(11090179-11090217)
chr3 (119-181)||(14186648-14186709)
chr3 (119-181)||(15048075-15048137)
chr3 (119-177)||(26988996-26989053)
chr3 (130-176)||(32651457-32651503)
chr3 (119-173)||(42430335-42430388)
chr3 (123-181)||(45308916-45308974)
chr3 (119-168)||(3054994-3055043)
chr3 (119-176)||(26481927-26481984)
chr3 (119-164)||(26871535-26871580)
chr3 (119-155)||(1360921-1360957)
chr3 (126-182)||(8075140-8075196)
chr3 (127-175)||(11612307-11612355)
chr3 (145-181)||(31608538-31608574)
chr3 (119-175)||(40063619-40063675)
chr3 (119-167)||(47079701-47079749)
[»] chr7 (48 HSPs)
chr7 (117-181)||(25590609-25590673)
chr7 (119-181)||(48771938-48772000)
chr7 (119-181)||(26459424-26459486)
chr7 (119-176)||(25021354-25021411)
chr7 (121-176)||(21854550-21854605)
chr7 (118-181)||(23301616-23301679)
chr7 (119-181)||(5579248-5579310)
chr7 (119-181)||(22760863-22760925)
chr7 (119-181)||(30579335-30579397)
chr7 (119-181)||(45709722-45709784)
chr7 (122-175)||(15905693-15905746)
chr7 (119-168)||(42836028-42836077)
chr7 (119-176)||(43590907-43590964)
chr7 (119-179)||(2446308-2446368)
chr7 (126-182)||(37085562-37085618)
chr7 (119-175)||(37233592-37233648)
chr7 (118-181)||(20335845-20335908)
chr7 (118-181)||(31835191-31835254)
chr7 (119-166)||(41487362-41487409)
chr7 (119-181)||(3280499-3280561)
chr7 (119-181)||(5273604-5273666)
chr7 (119-173)||(7801180-7801234)
chr7 (119-181)||(15137553-15137615)
chr7 (119-181)||(17041026-17041088)
chr7 (119-181)||(18363696-18363758)
chr7 (119-181)||(19553454-19553515)
chr7 (122-176)||(20952168-20952222)
chr7 (119-181)||(23552118-23552180)
chr7 (119-181)||(30442488-30442550)
chr7 (119-181)||(39631844-39631906)
chr7 (119-181)||(43215184-43215246)
chr7 (122-175)||(45976943-45976996)
chr7 (119-175)||(11720980-11721036)
chr7 (119-167)||(39499747-39499795)
chr7 (119-166)||(24513797-24513844)
chr7 (119-178)||(27776172-27776231)
chr7 (119-174)||(48125195-48125250)
chr7 (118-168)||(4161287-4161337)
chr7 (119-165)||(22932741-22932787)
chr7 (123-181)||(23595733-23595791)
chr7 (119-173)||(25956314-25956368)
chr7 (143-181)||(26703149-26703187)
chr7 (119-181)||(38374613-38374675)
chr7 (118-164)||(48039678-48039724)
chr7 (145-182)||(5934147-5934184)
chr7 (140-181)||(28236595-28236636)
chr7 (119-168)||(45559200-45559249)
chr7 (120-168)||(22927477-22927525)
[»] chr2 (36 HSPs)
chr2 (119-179)||(7799051-7799111)
chr2 (119-181)||(37480075-37480137)
chr2 (119-181)||(39714992-39715054)
chr2 (119-181)||(42327409-42327471)
chr2 (120-181)||(16918592-16918653)
chr2 (119-181)||(29503271-29503333)
chr2 (119-181)||(42602554-42602616)
chr2 (120-181)||(37755985-37756046)
chr2 (119-176)||(42922414-42922471)
chr2 (119-182)||(16381667-16381730)
chr2 (118-181)||(19016030-19016093)
chr2 (119-181)||(1729816-1729878)
chr2 (119-181)||(23052537-23052599)
chr2 (119-181)||(26545840-26545902)
chr2 (119-181)||(34041602-34041664)
chr2 (121-181)||(12086143-12086203)
chr2 (119-175)||(29197396-29197452)
chr2 (119-178)||(28846691-28846750)
chr2 (122-181)||(30359657-30359716)
chr2 (119-181)||(4438993-4439055)
chr2 (121-179)||(6760889-6760947)
chr2 (119-181)||(14500277-14500339)
chr2 (119-173)||(18825341-18825395)
chr2 (119-173)||(19322768-19322822)
chr2 (127-181)||(21213777-21213831)
chr2 (119-181)||(42860348-42860410)
chr2 (126-167)||(2144452-2144493)
chr2 (119-168)||(32106566-32106615)
chr2 (122-179)||(33962800-33962857)
chr2 (129-178)||(41504953-41505002)
chr2 (117-181)||(1435062-1435126)
chr2 (123-175)||(3001383-3001435)
chr2 (119-175)||(18259730-18259786)
chr2 (123-175)||(24191842-24191894)
chr2 (119-167)||(25931006-25931054)
chr2 (119-175)||(40416410-40416466)
[»] scaffold0258 (1 HSPs)
scaffold0258 (118-181)||(15337-15400)
[»] chr8 (43 HSPs)
chr8 (119-181)||(968362-968424)
chr8 (119-181)||(16852340-16852402)
chr8 (119-181)||(23361663-23361725)
chr8 (120-181)||(29858063-29858124)
chr8 (121-181)||(2203494-2203554)
chr8 (118-181)||(26688864-26688927)
chr8 (119-181)||(4830487-4830549)
chr8 (119-181)||(5264544-5264606)
chr8 (129-179)||(7140719-7140769)
chr8 (119-181)||(12281494-12281556)
chr8 (119-181)||(19703501-19703563)
chr8 (119-181)||(23874396-23874458)
chr8 (119-181)||(28783060-28783122)
chr8 (118-180)||(29431010-29431072)
chr8 (118-176)||(30483903-30483961)
chr8 (119-168)||(5801047-5801096)
chr8 (121-173)||(3624582-3624634)
chr8 (119-175)||(6569791-6569847)
chr8 (118-174)||(20994479-20994535)
chr8 (121-181)||(31087272-31087332)
chr8 (119-174)||(6436576-6436631)
chr8 (119-166)||(18540298-18540345)
chr8 (119-178)||(35641918-35641977)
chr8 (119-173)||(6530807-6530861)
chr8 (119-173)||(8484999-8485053)
chr8 (118-164)||(34986101-34986147)
chr8 (119-181)||(44780128-44780190)
chr8 (119-168)||(22268960-22269009)
chr8 (119-176)||(28898508-28898565)
chr8 (121-173)||(7286209-7286261)
chr8 (119-151)||(45527568-45527600)
chr8 (122-181)||(11492087-11492146)
chr8 (119-182)||(12988428-12988491)
chr8 (119-181)||(11819776-11819838)
chr8 (119-181)||(27750730-27750792)
chr8 (119-181)||(35287716-35287778)
chr8 (119-173)||(40591732-40591786)
chr8 (119-168)||(14254727-14254776)
chr8 (136-181)||(30774750-30774795)
chr8 (119-176)||(32157191-32157248)
chr8 (119-179)||(3826793-3826853)
chr8 (138-182)||(9555470-9555514)
chr8 (119-159)||(43292467-43292507)
[»] chr6 (21 HSPs)
chr6 (119-181)||(33549104-33549166)
chr6 (123-178)||(6776624-6776679)
chr6 (119-182)||(12188316-12188379)
chr6 (119-182)||(24641203-24641266)
chr6 (119-181)||(30127400-30127462)
chr6 (119-181)||(31623005-31623067)
chr6 (120-181)||(6758436-6758497)
chr6 (119-176)||(21418470-21418527)
chr6 (119-179)||(12633009-12633069)
chr6 (121-168)||(32613167-32613214)
chr6 (123-181)||(10338188-10338246)
chr6 (119-181)||(12234521-12234583)
chr6 (119-176)||(14557962-14558019)
chr6 (119-179)||(9433606-9433666)
chr6 (128-164)||(11597904-11597940)
chr6 (119-175)||(32201905-32201961)
chr6 (119-178)||(13227175-13227234)
chr6 (118-181)||(15951316-15951379)
chr6 (122-168)||(13441053-13441099)
chr6 (122-176)||(34293835-34293889)
chr6 (142-178)||(34786471-34786507)
[»] chr1 (46 HSPs)
chr1 (119-181)||(40257399-40257461)
chr1 (118-181)||(19528341-19528404)
chr1 (119-181)||(41508831-41508893)
chr1 (119-176)||(9165214-9165271)
chr1 (121-181)||(33700787-33700847)
chr1 (119-182)||(8177195-8177258)
chr1 (119-181)||(16893394-16893456)
chr1 (119-181)||(31794278-31794340)
chr1 (119-181)||(36371470-36371532)
chr1 (120-181)||(44126396-44126457)
chr1 (119-176)||(52116800-52116857)
chr1 (118-182)||(16169991-16170055)
chr1 (129-181)||(28022139-28022191)
chr1 (122-181)||(15786334-15786393)
chr1 (119-182)||(21547493-21547556)
chr1 (118-173)||(21694445-21694500)
chr1 (139-182)||(44046161-44046204)
chr1 (119-181)||(50901581-50901644)
chr1 (119-181)||(2219972-2220034)
chr1 (119-173)||(15581163-15581217)
chr1 (123-181)||(17745270-17745328)
chr1 (119-181)||(25297772-25297834)
chr1 (119-181)||(51814494-51814556)
chr1 (119-176)||(4566548-4566605)
chr1 (126-179)||(17410238-17410291)
chr1 (119-164)||(37310007-37310052)
chr1 (119-176)||(51703779-51703836)
chr1 (130-175)||(52336794-52336839)
chr1 (119-179)||(45235395-45235455)
chr1 (118-181)||(2799861-2799924)
chr1 (122-173)||(24730387-24730438)
chr1 (122-181)||(26232400-26232459)
chr1 (118-168)||(952510-952560)
chr1 (119-181)||(6122794-6122856)
chr1 (119-181)||(8904414-8904476)
chr1 (119-181)||(9117119-9117181)
chr1 (119-181)||(25494083-25494145)
chr1 (119-181)||(30689012-30689074)
chr1 (119-173)||(37046985-37047039)
chr1 (119-176)||(6650595-6650652)
chr1 (138-167)||(9643837-9643866)
chr1 (136-181)||(12587287-12587332)
chr1 (138-175)||(31383818-31383855)
chr1 (122-162)||(2379428-2379468)
chr1 (118-178)||(12259259-12259319)
chr1 (137-181)||(35562743-35562787)
[»] scaffold0299 (1 HSPs)
scaffold0299 (125-181)||(11534-11590)
[»] chr5 (24 HSPs)
chr5 (119-179)||(29075781-29075841)
chr5 (119-181)||(14495819-14495881)
chr5 (118-175)||(21549157-21549214)
chr5 (119-178)||(21589288-21589347)
chr5 (119-181)||(16457810-16457872)
chr5 (119-181)||(16773807-16773869)
chr5 (119-181)||(30109322-30109384)
chr5 (119-181)||(30883212-30883274)
chr5 (119-176)||(29692405-29692462)
chr5 (119-179)||(8278291-8278351)
chr5 (126-181)||(1410673-1410728)
chr5 (119-181)||(87437-87499)
chr5 (119-181)||(6844729-6844791)
chr5 (119-181)||(25627057-25627119)
chr5 (119-173)||(26598524-26598578)
chr5 (119-181)||(34984806-34984868)
chr5 (119-175)||(22020882-22020938)
chr5 (119-165)||(7918499-7918545)
chr5 (123-181)||(12883844-12883902)
chr5 (119-181)||(14285161-14285223)
chr5 (123-181)||(16436622-16436679)
chr5 (119-181)||(17028278-17028340)
chr5 (123-181)||(43241696-43241754)
chr5 (119-167)||(32670655-32670703)
[»] scaffold0417 (1 HSPs)
scaffold0417 (119-178)||(10219-10278)
[»] scaffold0021 (1 HSPs)
scaffold0021 (126-181)||(157001-157056)
[»] scaffold0118 (1 HSPs)
scaffold0118 (119-181)||(41647-41709)
[»] scaffold1367 (1 HSPs)
scaffold1367 (125-178)||(857-910)
[»] scaffold0032 (1 HSPs)
scaffold0032 (118-167)||(112281-112330)
[»] scaffold0194 (1 HSPs)
scaffold0194 (118-181)||(13060-13123)
[»] scaffold0172 (2 HSPs)
scaffold0172 (119-182)||(32782-32845)
scaffold0172 (119-181)||(15791-15853)
[»] scaffold0002 (1 HSPs)
scaffold0002 (122-181)||(94985-95044)
[»] scaffold0291 (1 HSPs)
scaffold0291 (119-181)||(2484-2546)
[»] scaffold0086 (1 HSPs)
scaffold0086 (118-164)||(47381-47427)
[»] scaffold0009 (1 HSPs)
scaffold0009 (119-181)||(19861-19923)
[»] scaffold0238 (1 HSPs)
scaffold0238 (119-175)||(5193-5249)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 6e-73; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 27 - 181
Target Start/End: Original strand, 51948388 - 51948542
Alignment:
Q  27 gaagggtaaacaaacgttgcctagctgaaaacatgatttaaccatgctttgttattgtttggatttccaaagtgagattaattttatggtccaacccact 126  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51948388 gaagggtaaacaaacgttgcctaactgaaaacatgatttaaccatgctttgttattgtttggatttccaaagtgagattaattttatggtccaacccact 51948487  T
Q  127 tgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  51948488 tgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggt 51948542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 9241101 - 9241039
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggt 9241039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 19238653 - 19238591
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggt 19238591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 28635696 - 28635758
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggt 28635758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 37720290 - 37720228
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  37720290 aacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggt 37720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 51250598 - 51250549
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgc 51250549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 55427277 - 55427214
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| ||| ||| ||||||||    
T  55427277 caacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggt 55427214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 37109427 - 37109365
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 37109365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 27965586 - 27965537
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  27965586 aacccacttgggttggcctagtggtattggcttgggatctgggagtgtgc 27965537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 39509068 - 39509132
Alignment:
Q  117 ccaacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||||  ||  ||||| ||||||||||||||||||||||| ||||||||||||    
T  39509068 ccaacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggt 39509132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 37443702 - 37443749
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgt 166  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  37443702 aacccacttgggttgacctagtggtattggcttgggatctgggagtgt 37443749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 47044717 - 47044779
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||| ||| ||||||||||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggt 47044779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 12798684 - 12798747
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    ||||||||||||||| ||  |||||||||| ||| |||||||||||||||  ||||||||||||    
T  12798684 aacccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcctcgaggtt 12798747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 1730565 - 1730511
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||| ||| ||||||||||||||||| ||| |||||||| ||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctc 1730511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 17618281 - 17618343
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||  | | |||||||||||||||| || |||||||||||| ||||||||||||    
T  17618281 aacccacttgggccggcttggtggtattggcttgagacctgggagtgtgctcctcctcgaggt 17618343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 21660220 - 21660158
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||| ||||||||||  |||||||||||| |||| ||||||||||||||| | ||||||||||    
T  21660220 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggt 21660158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 21668984 - 21668922
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||| ||||||||||  |||||||||||| |||| ||||||||||||||| | ||||||||||    
T  21668984 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggt 21668922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 29195095 - 29195149
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||| ||||||||| ||||||||||| || ||||||||| ||||    
T  29195095 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 29195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 31759734 - 31759672
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  || |||||||||||||||||  ||||||||||| ||||||| ||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggt 31759672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 31826609 - 31826671
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||| |||||||||| || |||||||| ||||||| ||||    
T  31826609 aacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggt 31826671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 33619206 - 33619268
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||| |||  |||||| |||||    
T  33619206 aacccacttgggttgccttggtggtattggcttaggatctgggagcgtggtcctccttgaggt 33619268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 38869788 - 38869830
Alignment:
Q  139 gtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  38869788 gtggtattggcttgggatctgggagtgtgctcctcctcaaggt 38869830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 24234649 - 24234694
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||    
T  24234649 cacttgggttgtccaggtggtattggcttgggacttgggagtgtgc 24234694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 173
Target Start/End: Complemental strand, 38206204 - 38206147
Alignment:
Q  116 tccaacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    |||||||||||||||||| |||||||||  |||||||||| || ||||||||| ||||    
T  38206204 tccaacccacttgggttgacctggtggtgctggcttgggaccttggagtgtgctcctc 38206147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 46545711 - 46545768
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||| ||| |||||||||||||| || ||| |||||||| |||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctc 46545768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 41347036 - 41346980
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    |||||||||||| |||| ||||||||| ||| ||||||||||| ||| |||||||||    
T  41347036 ccacttgggttggcctgatggtattggtttgagatctgggagtatgctcctcctcga 41346980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 37274536 - 37274473
Alignment:
Q  119 aacccacttgggttgtcctggtggta-ttggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| || ||| ||||||||||| |||||||||||| ||||||| ||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggt 37274473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 49576963 - 49576908
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||| ||||||||||||||||| |||  ||||||||||| ||||||| ||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggt 49576908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 7292871 - 7292817
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||  || ||||||||||||||| | |||||||||||| |||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctc 7292817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 7949530 - 7949468
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||| || ||| | ||||||||||||||| || ||||||||| ||||||| ||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggt 7949468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 8030280 - 8030218
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||| ||| ||| ||||||| |||||||||  ||||||||||| ||||||| ||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggt 8030218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 24827825 - 24827887
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||| |||||  | |||||||||| ||||||| ||||||||| || ||||||||||||    
T  24827825 aacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggt 24827887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 30938275 - 30938233
Alignment:
Q  139 gtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||    
T  30938275 gtggtattggtttgggatcttggagtgtgctcctcctcgaggt 30938233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 2622476 - 2622414
Alignment:
Q  118 caacccacttgggttgtcctggtggtatt----ggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||||||||||||| ||| ||||||||    ||||||||| |||||||||||| |||||||    
T  2622476 caacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctc 2622414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 20608921 - 20608970
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    ||||||||||||||||  ||| ||||||||||||| |||| |||||||||    
T  20608921 caacccacttgggttgatctgatggtattggcttgagatccgggagtgtg 20608970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 29312321 - 29312272
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||||| ||| |||||||||||||||||| ||||||||| | ||||||    
T  29312321 ttgggttggcctagtggtattggcttgggatgtgggagtgttctcctcct 29312272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 40284060 - 40284000
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||| | || ||||||||||||||||  |||||||||||  |||||| ||||    
T  40284060 cccacttgggttggcatgatggtattggcttgggacttgggagtgtgcatctcctcaaggt 40284000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 31520681 - 31520619
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggt 31520619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 31789049 - 31788983
Alignment:
Q  116 tccaacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  31789049 tccaacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggtt 31788983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 36720381 - 36720444
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  36720381 aacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtt 36720444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 2667869 - 2667924
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggt 2667924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 46518628 - 46518691
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    ||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||| |||||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtt 46518691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 10499185 - 10499123
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| | |||| |||||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggt 10499123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 51903954 - 51903896
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcg 177  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  51903954 aacccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcg 51903896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 4222141 - 4222198
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||| | | |||||||||||||||||||||||||||||| |||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctc 4222198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 47454692 - 47454631
Alignment:
Q  120 acccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| || |||||||||||||| ||||| ||||||||| ||||||||||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggt 47454631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 4844580 - 4844525
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggt 4844525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 4870276 - 4870221
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggt 4870221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 16991542 - 16991589
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgt 166  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  16991542 aacccatttgggttggcctggtggtattggcttgggatctgggagtgt 16991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 8051214 - 8051276
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||| |||  |||||||||||    
T  8051214 aacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggt 8051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 21960551 - 21960613
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| ||||||||  |||||||||||||||||||| ||| |||||||| ||||||||||||    
T  21960551 aacccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggt 21960613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 30311306 - 30311368
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||| ||||||| ||| ||||||| |||||||||||||||||||||| ||||||| ||||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggt 30311368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 53956384 - 53956446
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||||||| ||| |||||||||||| | |||||||||||||| || |||||    
T  53956384 aacccacttgggttgtcctgatggcattggcttgggacccgggagtgtgccccttcttgaggt 53956446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 14339610 - 14339667
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctc 14339667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 5499483 - 5499427
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||||||||||| ||||||||||||| |||| |||||| |||||||| ||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctcct 5499427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 10445216 - 10445153
Alignment:
Q  119 aacccacttgggttgtcctggtggta-ttggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| |||| | ||||||||||| |||||||||||| ||||||||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggt 10445153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 16354970 - 16354911
Alignment:
Q  117 ccaacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||||| ||| ||||||||||||||| | ||| |||||||| |||||||    
T  16354970 ccaacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctc 16354911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 30510272 - 30510213
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||||||||| |||||||||| || ||||| ||| ||| ||||||||    
T  30510272 ccacttgggttgtcctggtggtactggcttgggacctaggagtatgctccttctcgaggt 30510213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 2597296 - 2597234
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  |||||||||||||||| |||| | ||||||||| |||||| |||||    
T  2597296 aacccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggt 2597234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 7975418 - 7975480
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| || ||||| ||| ||||||| |||||||||||||||||||||| ||||||| ||||    
T  7975418 aacccatttaggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggt 7975480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 9832497 - 9832543
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtg 165  Q
    ||||||||||||||| || |||||||||||||||||| |||||||||    
T  9832497 aacccacttgggttggcccggtggtattggcttgggacctgggagtg 9832543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 27093437 - 27093375
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||| |  ||||||||||| ||||||| ||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggt 27093375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 28928952 - 28928898
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||||| ||| ||| ||||||||||||||||||||| |||||||| |||||||    
T  28928952 ccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctcctc 28928898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 53863943 - 53863889
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||||||||||| | ||||||||||| || ||||||||| ||||    
T  53863943 aacccacttgggttgtcctggtgatgttggcttgggaccttggagtgtgctcctc 53863889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 203090 - 203139
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatcagggagtgtgc 203139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 27923119 - 27923062
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||| ||||| |||||||||||||||||||||  ||| ||||||| |||||||    
T  27923119 aacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctc 27923062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 30232330 - 30232387
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||| |||||||||||||| ||| ||||||| | ||||| |||||||    
T  30232330 aacccacttgggttgccctggtggtattggtttgcgatctggaactgtgctcctcctc 30232387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 9557320 - 9557380
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||| | || |||| | |||||||||||||||||| |||||||| ||||||||||    
T  9557320 aacccacttgagctggcctgatagtattggcttgggatctgagagtgtgctcctcctcgag 9557380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 32638945 - 32638993
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    |||||| ||||||||| |||||||||||||||||| | |||||||||||    
T  32638945 aacccatttgggttgttctggtggtattggcttggaaactgggagtgtg 32638993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 42799821 - 42799769
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||| ||||||||| ||||||||||| || ||||||||| ||||    
T  42799821 cccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 42799769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 24459989 - 24460024
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgg 153  Q
    |||||||||||||||| |||||||||||||||||||    
T  24459989 caacccacttgggttggcctggtggtattggcttgg 24460024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 27259185 - 27259224
Alignment:
Q  143 tattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtt 27259224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 28531111 - 28531072
Alignment:
Q  142 gtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggt 28531072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 181
Target Start/End: Complemental strand, 44743904 - 44743869
Alignment:
Q  146 tggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||||||||| ||||||||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggt 44743869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Complemental strand, 11090217 - 11090179
Alignment:
Q  143 tattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggt 11090179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 14186648 - 14186709
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||| ||||||| || ||||||||| ||||||| ||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacct-ggagtgtgctcctcctcaaggt 14186709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 15048137 - 15048075
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | |  |||||| |||||||||||||||| ||||| ||||||| ||||    
T  15048137 aacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggt 15048075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 26988996 - 26989053
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcg 177  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| |||| ||| ||||||||    
T  26988996 aacccacttgggttggcctagtggtattggctt-ggatctgagagtttgctcctcctcg 26989053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 32651503 - 32651457
Alignment:
Q  130 gttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||| ||| ||||||||||||||||| |||||||||||| |||||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcctc 32651457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 42430335 - 42430388
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||| | ||||||||||| |||||||||| ||||||||| ||||    
T  42430335 aacccacttgggttggc-tggtggtattgacttgggatcttggagtgtgctcctc 42430388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 45308974 - 45308916
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||| ||||||||||||| ||||||  || |||| ||| ||||||||||||    
T  45308974 cacttgggttgttctggtggtattggtttgggacttgtgagtatgctcctcctcgaggt 45308916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 3054994 - 3055043
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||||||||| ||||||||||| || |||| ||||    
T  3054994 aacccacttgggttggcctggtggtgttggcttgggaccttggagcgtgc 3055043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 26481927 - 26481984
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||  | |||||||| |||||||||| ||| |||||||| |||||||    
T  26481927 aacccacttgggttagcttggtggtaatggcttgggacctgagagtgtgctcctcctc 26481984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 26871580 - 26871535
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagt 164  Q
    ||||||||||||||| ||||||||| ||||||||||| || |||||    
T  26871580 aacccacttgggttggcctggtggtgttggcttgggaccttggagt 26871535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 1360921 - 1360957
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttggga 155  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  1360921 aacccacttgggttggcctggtgttattggcttggga 1360957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 8075196 - 8075140
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||||| ||| ||||||| |||||||||  ||||||||||| ||||||| |||||    
T  8075196 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtt 8075140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 11612307 - 11612355
Alignment:
Q  127 tgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||| ||||||||||||  ||||||| |||||||||||| ||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctcct 11612355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 31608574 - 31608538
Alignment:
Q  145 ttggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  31608574 ttggcttgagatctgggagtgtgctcctcctcgaggt 31608538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 40063619 - 40063675
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||||||||||| | | || |||||||||||||||||| |||| ||| ||||||    
T  40063619 aacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctcct 40063675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 47079701 - 47079749
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    |||||||||||||||  |||||||| |||||||||||||| ||| ||||    
T  47079701 aacccacttgggttggtctggtggtgttggcttgggatcttggaatgtg 47079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 25590609 - 25590673
Alignment:
Q  117 ccaacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  25590609 ccaacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggt 25590673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 48771938 - 48772000
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggt 48772000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 26459486 - 26459424
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 26459424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 25021411 - 25021354
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctc 25021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 21854550 - 21854605
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctc 21854605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 23301679 - 23301616
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||| ||||||||||||| |||||||  ||||||||||| |||||| |||||    
T  23301679 caacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggt 23301616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 5579310 - 5579248
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||||||||| ||||||||||| || ||||||||| ||||||| ||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggt 5579248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 22760863 - 22760925
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||||| ||||||| ||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggt 22760925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 30579335 - 30579397
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||| | ||||||| ||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggt 30579397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 45709784 - 45709722
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| |||||||| ||| |||||||| |||||||||||| |||||||| ||||||||||||    
T  45709784 aacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggt 45709722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 15905746 - 15905693
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcct 15905693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 42836077 - 42836028
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgc 42836028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 43590907 - 43590964
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| |||||||| |||||||||||||||||||||  ||||||||||| |||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctc 43590964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 2446308 - 2446368
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||||||||  ||| ||||||||||||||||  ||||||||||| ||||||||||    
T  2446308 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgag 2446368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 37085618 - 37085562
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||||| | |||||||||||||||||||| ||||||||||| | |||||||||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctcatcctcgaggtt 37085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 37233648 - 37233592
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||||||||||| | ||||| |||||||||||||| ||||||||||| ||||||    
T  37233648 aacccacttgggttgacttggtgatattggcttgggatgtgggagtgtgctcctcct 37233592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 20335908 - 20335845
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||  || | |||||||||||||||  ||||||||||| ||||||||||||    
T  20335908 caacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggt 20335845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 31835191 - 31835254
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||| ||||||||| ||||||||||  || ||||||||| ||||||| ||||    
T  31835191 caacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggt 31835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 41487362 - 41487409
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgt 166  Q
    ||||||||||||||| |||||||||||||||||||||  |||||||||    
T  41487362 aacccacttgggttggcctggtggtattggcttgggacttgggagtgt 41487409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 3280561 - 3280499
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | ||||||||||||||||||| | | |||||||| ||||||| ||||    
T  3280561 aacccacttgggttgacatggtggtattggcttgggacccgagagtgtgctcctcctcaaggt 3280499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 5273666 - 5273604
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||||||||| ||||||||||| ||  |||||||| ||||||| ||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggt 5273604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 7801180 - 7801234
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||| ||| ||||||||||||| ||||||| |||||||||||| ||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctc 7801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 15137553 - 15137615
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||| || |||||||| | ||||||||| ||||||| ||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggt 15137615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 17041088 - 17041026
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  || |||| ||||||||||||||||| ||||||| ||||||| ||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggt 17041026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 18363696 - 18363758
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||| |||||| ||| ||||||||||| ||||||| ||||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggt 18363758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 19553454 - 19553515
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||| ||||||||| ||||||||||||||||| ||| |||||||||||| ||||||| ||||    
T  19553454 aacccgcttgggttggcctggtggtattggctt-ggacctgggagtgtgctcctcctcaaggt 19553515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 20952222 - 20952168
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||||||||| |||| ||||||||| |||||| |||||||||||| |||||||    
T  20952222 ccacttgggttgacctgatggtattggtttgggacctgggagtgtgctcctcctc 20952168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 23552118 - 23552180
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||||||||| ||||||| ||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggt 23552180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 30442488 - 30442550
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||  ||||||||||||||||| |||||||| ||| ||||||| ||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggt 30442550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 39631844 - 39631906
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||  || ||||||| ||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggt 39631906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 43215184 - 43215246
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  || ||||||||||||||||| || ||||||||| ||||||| ||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggt 43215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 45976996 - 45976943
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||||||||| ||| |||||||||||||| || |||||||||||| ||||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctcct 45976943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 11721036 - 11720980
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||| |||| ||||| ||||||||||||||||||||| |||||| ||||| ||||||    
T  11721036 aaccaacttcggttggcctggtggtattggcttgggacctgggaatgtgctcctcct 11720980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 39499795 - 39499747
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    ||||||||||||||| ||| ||||||||||||||||| ||| |||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtg 39499747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 24513797 - 24513844
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgt 166  Q
    ||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  24513797 aacccacttgggttggcctagtggtattggcttgagatttgggagtgt 24513844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 27776172 - 27776231
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    ||||||||||||||| |||||||||||  ||||||||  || |||||||| |||||||||    
T  27776172 aacccacttgggttggcctggtggtatacgcttgggacttgagagtgtgctcctcctcga 27776231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 48125250 - 48125195
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcc 174  Q
    |||||||||||||||  |||||||| ||||||||||| || ||||||||| |||||    
T  48125250 aacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctcc 48125195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 4161287 - 4161337
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||| ||||||||  ||||||||||||||||||||||| | |||||||    
T  4161287 caacccatttgggttggtctggtggtattggcttgggatcttgaagtgtgc 4161337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 22932787 - 22932741
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtg 165  Q
    |||||||||||||||   ||||||||||||||||||| |||||||||    
T  22932787 aacccacttgggttggtatggtggtattggcttgggacctgggagtg 22932741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 23595733 - 23595791
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||  |||||||||||| |||| ||||| ||||||||| ||||||| ||||    
T  23595733 cacttgggttggtctggtggtattgacttgagatctcggagtgtgctcctcctcaaggt 23595791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 25956368 - 25956314
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    |||||| |||||||| ||| ||||||||||||||||| || ||||||||| ||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcctc 25956314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 26703149 - 26703187
Alignment:
Q  143 tattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggt 26703187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 38374675 - 38374613
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | ||||||| ||||||||||| ||  |||||||| ||||||| ||||    
T  38374675 aacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggt 38374613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 48039724 - 48039678
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagt 164  Q
    |||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  48039724 caacccacttgggttggcctggtggtgttggcttgcgatcttggagt 48039678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 5934147 - 5934184
Alignment:
Q  145 ttggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggtt 5934184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 28236636 - 28236595
Alignment:
Q  140 tggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||| ||||||||| || ||||||||||||    
T  28236636 tggtattggcttgggacctgggagtgcgctcctcctcgaggt 28236595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 45559200 - 45559249
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||| ||||||||||||||| | || |||||||||    
T  45559200 aacccacttgggttggcctagtggtattggcttggaaccttggagtgtgc 45559249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 22927477 - 22927525
Alignment:
Q  120 acccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    |||||||||||||| ||| ||||||||  |||||||||| |||||||||    
T  22927477 acccacttgggttggcctagtggtattaacttgggatctaggagtgtgc 22927525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 3e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 7799111 - 7799051
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  7799111 aacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgag 7799051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 37480075 - 37480137
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||| ||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggt 37480137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 39714992 - 39715054
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | ||||||||||| ||||||| |||||||||||| ||||||||||||    
T  39714992 aacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggt 39715054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 42327471 - 42327409
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 42327409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 16918653 - 16918592
Alignment:
Q  120 acccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||| ||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggt 16918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 29503271 - 29503333
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| |||||||||| |||||| |||||||||||| ||||||| ||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggt 29503333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 42602554 - 42602616
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||| ||| ||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggt 42602616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 37756046 - 37755985
Alignment:
Q  120 acccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||| | ||||||||||||||||||| |||||| ||||| ||| ||||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggt 37755985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 42922414 - 42922471
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||||||||| |||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctc 42922471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 16381730 - 16381667
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    ||||||||||||||| ||| ||||||| ||||||||||||| |||||| | ||||||| |||||    
T  16381730 aacccacttgggttggcctagtggtataggcttgggatctgagagtgttctcctcctcaaggtt 16381667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 19016030 - 19016093
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||  ||| ||||||||||||| ||  ||||||||||| ||||||||||||    
T  19016030 caacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggt 19016093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 1729816 - 1729878
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  || |||||||||||||||||  ||||||||||| ||||||| ||||    
T  1729816 aacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggt 1729878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 23052599 - 23052537
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||| ||||| |||||||||||||||||||||  |||||||||||  |||||| ||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggt 23052537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 26545840 - 26545902
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||   |||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  26545840 aacccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggt 26545902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 34041664 - 34041602
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||| ||| ||||||| |||||||| ||||||| ||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggt 34041602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 12086203 - 12086143
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||  |||| ||||||||||||||||||||| |||| ||||||| ||||||| ||||    
T  12086203 cccacttaagttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggt 12086143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 29197452 - 29197396
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||||||||||| | ||||||||||| |||||||  ||||||||||| ||||||    
T  29197452 aacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctcct 29197396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 28846691 - 28846750
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    ||||||||| |||||  || ||||||||| ||||||| |||||||||||| |||||||||    
T  28846691 aacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcga 28846750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 30359657 - 30359716
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||| | ||||||| ||||||||||| || ||||||||| ||||||| ||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcctcctcaaggt 30359716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 4439055 - 4438993
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||  |||||||  ||||||||||| |||||||| ||||||| ||||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggt 4438993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 6760889 - 6760947
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||| ||| |||| |||||    
T  6760889 cccacttgggttggtctggtagtattggtttgggatctgggagtatgctcctcatcgag 6760947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 14500277 - 14500339
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||| ||| ||| |||||||  ||||| ||||||||||||||| ||||||| ||||    
T  14500277 aacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggt 14500339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 18825341 - 18825395
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||  ||||||||| ||||||||||| || ||||||||| ||||    
T  18825341 aacccacttgggtttacctggtggtgttggcttgggacctaggagtgtgctcctc 18825395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 19322768 - 19322822
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    |||||||||||||||  || |||||||||| |||||| |||||||||||| ||||    
T  19322768 aacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctc 19322822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 21213777 - 21213831
Alignment:
Q  127 tgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||  |||||||||||||||||||| |||||||||||  |||||| |||||    
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggt 21213831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 42860348 - 42860410
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||| ||||| |||| ||||||| ||||| |||| || |||||||||||| ||||||||||||    
T  42860348 aacctacttgagttggcctggtgatattgacttgagacctgggagtgtgctcctcctcgaggt 42860410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 2144452 - 2144493
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    ||||||||  ||||||||||||||||||||| ||||||||||    
T  2144452 ttgggttgatctggtggtattggcttgggatatgggagtgtg 2144493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 32106566 - 32106615
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||||||||| ||| ||||||| || |||||||||    
T  32106566 aacccacttgggttggcctggtggtgttgacttgggaccttggagtgtgc 32106615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 33962857 - 33962800
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||||| |||  || |||||| |||||| |||||||||||| ||||||||||    
T  33962857 ccacttgggttggcctaatgatattggtttgggaactgggagtgtgctcctcctcgag 33962800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 41505002 - 41504953
Alignment:
Q  129 ggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    |||||| | |||||||||||||||||| |||||||| ||| |||||||||    
T  41505002 ggttgttcgggtggtattggcttgggacctgggagtatgctcctcctcga 41504953  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 1435062 - 1435126
Alignment:
Q  117 ccaacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||| | | |||||| ||||||||||| | |||||||||  |||||| ||||    
T  1435062 ccaacccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggt 1435126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 3001383 - 3001435
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||||||| ||| ||||||||| |||| ||||| ||||||||| ||||||    
T  3001383 cacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctcct 3001435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 18259730 - 18259786
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||| ||| |||| |||||||||||||||||| ||| || |||||||| ||||||    
T  18259730 aacccatttgagttggcctggtggtattggcttgagatttgagagtgtgctcctcct 18259786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 24191842 - 24191894
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||| |||| |||| |||||||||||||||| ||| |||||||| ||||||    
T  24191842 cacttgagttggcctgatggtattggcttgggacctgagagtgtgctcctcct 24191894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 25931006 - 25931054
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    |||||| |||||||| |||||||||||||| |||||| ||| |||||||    
T  25931006 aacccatttgggttggcctggtggtattggtttgggacctgagagtgtg 25931054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 40416466 - 40416410
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||||||||||| ||| ||||||||| ||||| | |||||||| ||| ||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctcct 40416410  T

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Target: scaffold0258 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 15400 - 15337
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||||||    
T  15400 caacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggt 15337  T

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Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 968362 - 968424
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggt 968424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 16852340 - 16852402
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggt 16852402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 23361725 - 23361663
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggt 23361663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 29858124 - 29858063
Alignment:
Q  120 acccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||| ||| ||||||||||||||||||||| | |||||||||| ||||||||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggt 29858063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 2203494 - 2203554
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||| ||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 2203554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 26688864 - 26688927
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||| ||||||||| ||||||||||| || ||||||||| ||||||| ||||    
T  26688864 caacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggt 26688927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 4830487 - 4830549
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||||| | |||||||||| |||||||  ||||||||||||    
T  4830487 aacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggt 4830549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 5264544 - 5264606
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||| ||||| ||||||||||||    
T  5264544 aacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggt 5264606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 7140719 - 7140769
Alignment:
Q  129 ggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  7140719 ggttatcctggtggtattggcttgggatctgggtgtgtgctcctcctcgag 7140769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 12281494 - 12281556
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| | ||||||| || ||||||||||||||||| ||| |||||||||||||||||||||    
T  12281494 aacccattagggttgttcttgtggtattggcttgggacctgagagtgtgcccctcctcgaggt 12281556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 19703563 - 19703501
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| ||| |||||||| ||||||| ||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggt 19703501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 23874458 - 23874396
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||| | ||| ||||||||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggt 23874396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 28783060 - 28783122
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | |||||||||||||||| || |||||||||||| ||||||| ||||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggt 28783122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 29431010 - 29431072
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgagg 180  Q
    |||||||||||||||| ||||| |||||||||||||||  ||||||||||| |||||| ||||    
T  29431010 caacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgagg 29431072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 30483961 - 30483903
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||||||||||||| ||  |||||||||||||||||| ||||||||||| |||||||    
T  30483961 caacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctc 30483903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 5801047 - 5801096
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  5801047 aacccacttgggttgacctggtggtattagcttgggatctaggagtgtgc 5801096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 3624582 - 3624634
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctc 3624634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 6569847 - 6569791
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||||||| ||||| ||| ||| |||||||||||||||||||||||||| ||||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcct 6569791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 20994535 - 20994479
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcc 174  Q
    |||||||||||||||| ||| ||||||||| ||||||| |||||||||||| |||||    
T  20994535 caacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctcc 20994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 31087332 - 31087272
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||   |||| |||||||||||||||||||||| | ||||||||||||||    
T  31087332 cccacttgggttgtttcggtgatattggcttgggatctgggagtatccccctcctcgaggt 31087272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 6436631 - 6436576
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcc 174  Q
    ||||||||||||||| |||||||||||||||||||||  | ||||||||| |||||    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctcc 6436576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 18540298 - 18540345
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgt 166  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgt 18540345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 35641977 - 35641918
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    |||||||||||||||  |||||||||| |||||| ||| ||||||||||| |||||||||    
T  35641977 aacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcga 35641918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 6530807 - 6530861
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||| ||||||||| ||||||||||| || ||||||||| ||||    
T  6530807 aacccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcctc 6530861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 8484999 - 8485053
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |||||||| ||||    
T  8484999 aacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctc 8485053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 34986101 - 34986147
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagt 164  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  34986101 caacccacttgggttgttctggtggtattggtttgggacctgggagt 34986147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 44780190 - 44780128
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| |||| ||||||||||||  ||||||||||| ||||||| ||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggt 44780128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 22269009 - 22268960
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||||||||| ||||||||||| || |||||||||    
T  22269009 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgc 22268960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 28898565 - 28898508
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||| ||||| ||| ||| ||||||||||| ||||| ||||||||||||||||    
T  28898565 aacccacttaggttgacctagtgatattggcttggaatctgagagtgtgcccctcctc 28898508  T

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Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 7286209 - 7286261
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||| ||||| ||| |||||||||| ||||||||||||||||||| ||||    
T  7286209 cccacttaggttgacctagtggtattggtttgggatctgggagtgtgctcctc 7286261  T

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Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 151
Target Start/End: Original strand, 45527568 - 45527600
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggctt 151  Q
    |||||||||||||||||||||||||||||||||    
T  45527568 aacccacttgggttgtcctggtggtattggctt 45527600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 11492146 - 11492087
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||| | ||  |||||||||||| ||||||||||||||| ||| ||||||||    
T  11492146 ccacttgggttggcatgtcggtattggcttgagatctgggagtgtgctccttctcgaggt 11492087  T

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Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 12988428 - 12988491
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    ||||||||||| ||| ||| ||||||||||||||| | |||| ||||||| ||||||| |||||    
T  12988428 aacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtt 12988491  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 11819776 - 11819838
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| |||||||| ||| ||||||| |||||||||  ||||||||||| ||||||| ||||    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggt 11819838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 27750730 - 27750792
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| |||||||| ||| ||||||| |||||||||  ||||||||||| ||||||| ||||    
T  27750730 aacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggt 27750792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 35287716 - 35287778
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||| | ||||||||| |||||||| ||| | ||||||||| ||||||| ||||    
T  35287716 aacccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcctcctcaaggt 35287778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 40591732 - 40591786
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    |||||||||| |||| ||||||||||||||||| |||  ||||||||||| ||||    
T  40591732 aacccacttgtgttggcctggtggtattggcttcggacttgggagtgtgctcctc 40591786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 14254727 - 14254776
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||||| ||| || ||||||| ||| |||||||||||||||    
T  14254727 aacccacttgggttgacctagttgtattggtttgagatctgggagtgtgc 14254776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 30774795 - 30774750
Alignment:
Q  136 ctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||| ||||||||||| ||||||  ||||||||||||    
T  30774795 ctggtggtattggtttgggatctggaagtgtgttcctcctcgaggt 30774750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 32157191 - 32157248
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| |||||||| ||||||||||||| ||||||| || ||||| ||| |||||||    
T  32157191 aacccatttgggttggcctggtggtattgacttgggaccttggagtatgctcctcctc 32157248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 3826853 - 3826793
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    ||||||||||||||| ||| ||||||||||||||  || || |||||||| ||||| ||||    
T  3826853 aacccacttgggttggcctagtggtattggcttgccatttgagagtgtgctcctccacgag 3826793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 9555514 - 9555470
Alignment:
Q  138 ggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||    
T  9555514 ggtggtcttggtttgggatctaggagtgtgctcctcctcgaggtt 9555470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 43292507 - 43292467
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctg 159  Q
    |||||| |||||||||| | |||||||||||||||||||||    
T  43292507 aacccatttgggttgtcttagtggtattggcttgggatctg 43292467  T

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Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 33549104 - 33549166
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||||||    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggt 33549166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 6776679 - 6776624
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcga 6776624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 12188379 - 12188316
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||| |||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtt 12188316  T

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Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 24641266 - 24641203
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||| |||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||    
T  24641266 aacccatttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcctcgaggtt 24641203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 30127400 - 30127462
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||||||| |||| |||||||    
T  30127400 aacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggt 30127462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 31623067 - 31623005
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  | |||||||||||||||||| |||||||||||| ||||||||||||    
T  31623067 aacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggt 31623005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 6758497 - 6758436
Alignment:
Q  120 acccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||| |||| ||||||||||||||||| |||| ||||||||||| || |||||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggt 6758436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 21418470 - 21418527
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| |||||||| |||||||||||||||||||||  ||||||||||| |||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctc 21418527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 12633009 - 12633069
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||||||||||| |||| ||||| |||||||| ||||||||||| |||| |||||    
T  12633009 aacccacttgggttgtcccggtgatattgacttgggatttgggagtgtgctcctcttcgag 12633069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Complemental strand, 32613214 - 32613167
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgc 32613167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 10338246 - 10338188
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||| | ||||||||||||||||||| || ||||||||| ||||||| ||||    
T  10338246 cacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggt 10338188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 12234583 - 12234521
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||| ||||| ||||||||||||| ||||||| |||||||||||| ||  ||||||||    
T  12234583 aacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggt 12234521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 14557962 - 14558019
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||||||||||||  |||||||| ||||||||||| |||| ||||||| |||||||    
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctc 14558019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 9433666 - 9433606
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    ||||||||||| ||| ||  ||||||||| |||||||||||||||||||| | ||||||||    
T  9433666 aacccacttggattgaccctgtggtattgacttgggatctgggagtgtgctcttcctcgag 9433606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 11597904 - 11597940
Alignment:
Q  128 gggttgtcctggtggtattggcttgggatctgggagt 164  Q
    |||||| ||||||||||||||||||||||||||||||    
T  11597904 gggttgacctggtggtattggcttgggatctgggagt 11597940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 32201961 - 32201905
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||| |||||||| | ||||||||||||||||||||||  |||||||| ||||||    
T  32201961 aacccatttgggttgacttggtggtattggcttgggatctcagagtgtgctcctcct 32201905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 13227234 - 13227175
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    ||||||||||||||| ||  ||||||||||  || ||||||||||||||| |||||||||    
T  13227234 aacccacttgggttggccatgtggtattggtatgagatctgggagtgtgctcctcctcga 13227175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 15951379 - 15951316
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||| |||||||||||| |||||||  ||||| ||| ||||||||||| ||||||| ||||    
T  15951379 caacccagttgggttgtccttgtggtataagcttgagatttgggagtgtgctcctcctcaaggt 15951316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 13441053 - 13441099
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||||  | |||||||||||||||||| ||||||||||||    
T  13441053 ccacttgggttggtcgggtggtattggcttgggacctgggagtgtgc 13441099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 34293889 - 34293835
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||||||||| ||| |||||||||| |||| || ||||||||||| |||||||    
T  34293889 ccacttgggttgacctagtggtattggtttggaatttgggagtgtgctcctcctc 34293835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 34786507 - 34786471
Alignment:
Q  142 gtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  34786507 gtattggcttgggatctgggagtgtgctccttctcga 34786471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 40257399 - 40257461
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||||| ||||||||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggt 40257461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 19528404 - 19528341
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||| ||||||| ||||    
T  19528404 caacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggt 19528341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 41508831 - 41508893
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  41508831 aacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggt 41508893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 9165271 - 9165214
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctc 9165214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 33700847 - 33700787
Alignment:
Q  121 cccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||| ||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggt 33700787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 8177258 - 8177195
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||| ||| |||| ||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  8177258 aacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtt 8177195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 16893394 - 16893456
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||| ||||||||||||| ||| ||||||||| | ||||||||||||    
T  16893394 aacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggt 16893456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 31794340 - 31794278
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| |||||||||||||||||  ||||||||||| ||||||| ||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggt 31794278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 36371470 - 36371532
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||||||||| ||||||| ||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggt 36371532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 44126396 - 44126457
Alignment:
Q  120 acccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||| ||||||||||||| | ||||| |||||||||||| ||||| ||||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggt 44126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 52116857 - 52116800
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| |||||||| |||||||||||||||||||||  ||||||||||| |||||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctc 52116800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 16170055 - 16169991
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||||||||||||  ||||||||||||| ||||||| |||||||||||  ||||||| |||||    
T  16170055 caacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtt 16169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 28022191 - 28022139
Alignment:
Q  129 ggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||||||||||||| |||||| |||||  |||||||||||    
T  28022191 ggttgtcctggtggtattggcttgggacctgggattgtgcttctcctcgaggt 28022139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 15786393 - 15786334
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||  || || ||||||||||||||||||||||||||| ||||||| ||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggt 15786334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 21547556 - 21547493
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||| |||||||||| ||| |||||||||||||||||  |||||| |||| |||||||||||||    
T  21547556 aaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtt 21547493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 21694445 - 21694500
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    |||||||||||||||| |||||||||||||||||| ||  ||||||||||| ||||    
T  21694445 caacccacttgggttgacctggtggtattggcttgagacttgggagtgtgctcctc 21694500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 44046204 - 44046161
Alignment:
Q  139 gtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  44046204 gtggtattggcttgggatctgggagtgtgctcctcctcaaggtt 44046161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 50901581 - 50901644
Alignment:
Q  119 aacccacttgggttgtcctggtggta-ttggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| |||||| ||||||||||| |||| ||||||| ||||||||||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggt 50901644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 2219972 - 2220034
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||| |||||||||||||||||| | |||  |||||||  |||||||||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggt 2220034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 15581217 - 15581163
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||||||| ||||||||| ||||||||||| || ||||||||| ||||    
T  15581217 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctc 15581163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 17745328 - 17745270
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||| ||| ||||||||||||||||| ||| | |||||| ||||||||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggt 17745270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 25297772 - 25297834
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  || ||||||||| ||| ||||||| |||||||| ||||||||||||    
T  25297772 aacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggt 25297834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 51814494 - 51814556
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| |||| |||||||| |||| |||||| |||||||| ||||||| ||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggt 51814556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 4566548 - 4566605
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    ||||||||||||||| ||| ||| ||||||||||| | |||||||||||| |||||||    
T  4566548 aacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctc 4566605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 17410238 - 17410291
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||| ||| |||||||||| ||||||||||||||||||  ||||||||||    
T  17410238 ttgggttggcctagtggtattggtttgggatctgggagtgtggtcctcctcgag 17410291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 37310052 - 37310007
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagt 164  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||    
T  37310052 aacccacttgggttggcctggtggtattagcttcggatctgggagt 37310007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 51703779 - 51703836
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| ||||||||  || ||||||||||||||| |||||||||||||| |||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctc 51703836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 52336839 - 52336794
Alignment:
Q  130 gttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctcct 52336794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 45235455 - 45235395
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||||||||  ||| ||||||||| ||||||  ||||||||||| ||||||||||    
T  45235455 aacccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcctcgag 45235395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 2799861 - 2799924
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||| | ||| ||| ||||||| |||||| ||||||||||||||| ||||||| ||||    
T  2799861 caacccacttcgcttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggt 2799924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 24730387 - 24730438
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    |||||||||||| ||| ||||||||| |||| ||||||||||||||| ||||    
T  24730387 ccacttgggttggcctagtggtattgtcttgagatctgggagtgtgctcctc 24730438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 26232459 - 26232400
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||  || |||||||||||||| ||||||||||||||| ||| || |||||    
T  26232459 ccacttgggttggtctagtggtattggcttgagatctgggagtgtgctcctgcttgaggt 26232400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 952510 - 952560
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgc 168  Q
    ||||||||||| ||||  |||||||| ||||||||||| ||||||||||||    
T  952510 caacccacttgagttggtctggtggtgttggcttgggacctgggagtgtgc 952560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 6122794 - 6122856
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| |||||||| ||| ||||||| |||||||||  ||||||||||| ||||||| ||||    
T  6122794 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggt 6122856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 8904414 - 8904476
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| || |||||| |||||||| || |||||||| ||||||| ||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggt 8904476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 9117119 - 9117181
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| |||||||| || | |||||| |||||||||||||| ||||||| |||||| |||||    
T  9117119 aacccatttgggttggccggttggtatgggcttgggatctggaagtgtgctcctccttgaggt 9117181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 25494145 - 25494083
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||  ||| ||| |||||||||||||||||||| ||||| |||  |||||||||||    
T  25494145 aacccacttgaattgacctagtggtattggcttgggatctaggagtttgcttctcctcgaggt 25494083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 30689012 - 30689074
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||| ||||| |||| |||||||||||| ||| |||||||| ||| |||||| |||||    
T  30689012 aacccacttaggttgccctgatggtattggcttaggacctgggagtttgctcctccttgaggt 30689074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 37046985 - 37047039
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    |||||||||||||||  |||||||| ||||||||||| || ||||||||| ||||    
T  37046985 aacccacttgggttggtctggtggtgttggcttgggaccttggagtgtgctcctc 37047039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 6650595 - 6650652
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| || ||||| ||| ||||||||||||||||||| |||||| ||| |||||||    
T  6650595 aacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctc 6650652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 9643866 - 9643837
Alignment:
Q  138 ggtggtattggcttgggatctgggagtgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  9643866 ggtggtattggcttgggatctgggagtgtg 9643837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 12587287 - 12587332
Alignment:
Q  136 ctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| ||||| ||||||||||| |||||||| ||||||||||||    
T  12587287 ctggtgatattgacttgggatctgtgagtgtgctcctcctcgaggt 12587332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 31383855 - 31383818
Alignment:
Q  138 ggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  31383855 ggtggtattggcttgggacctgggagtgtgctcctcct 31383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 2379428 - 2379468
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctggga 162  Q
    |||||||||||| ||| |||||||||| |||||||||||||    
T  2379428 ccacttgggttgacctagtggtattggtttgggatctggga 2379468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 12259259 - 12259319
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    |||||||||||||||| | | ||| ||||  |||||||| ||||||||||| |||||||||    
T  12259259 caacccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcga 12259319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 35562743 - 35562787
Alignment:
Q  137 tggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||||||| ||| || ||||| ||||||||||||    
T  35562743 tggtggtattggcttgggacctgagaatgtgctcctcctcgaggt 35562787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 11534 - 11590
Alignment:
Q  125 cttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggt 11590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 29075781 - 29075841
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgag 29075841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 14495881 - 14495819
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| ||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||    
T  14495881 aacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggt 14495819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 21549214 - 21549157
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||    
T  21549214 caacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 21549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 21589288 - 21589347
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||  ||||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcga 21589347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 16457810 - 16457872
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||| ||||| ||||||||||||||||||||| || ||||||||| ||||||| ||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggt 16457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 16773807 - 16773869
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||| ||||  |||||||||||| ||||||| |||||||||||| ||||||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggt 16773869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 30109384 - 30109322
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| | |||||||||||||||| || |||||||||||| |||||| |||||    
T  30109384 aacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggt 30109322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 30883274 - 30883212
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  || ||||||||||||||||| |||||||||||| ||||||| ||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 30883212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 29692462 - 29692405
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctc 176  Q
    |||||| ||||||||  ||||||||||||| ||||||||||||||||||| |||||||    
T  29692462 aacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctc 29692405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 8278351 - 8278291
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgag 179  Q
    |||||||||||||||  ||| ||||||||||||||||  ||||||||||| ||||||||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgag 8278291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 1410728 - 1410673
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||  |||||||||||| |||||||| ||||||||||| ||||||||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggt 1410673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 87499 - 87437
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||| ||||| ||| ||||||||| ||||| |||||||||||||| ||||||| ||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggt 87437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 6844729 - 6844791
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| || |||||||||| ||||| || ||||||||||  ||||||||||||    
T  6844729 aacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggt 6844791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 25627057 - 25627119
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| ||||||||||||||| |  ||||||||||| ||||||| ||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggt 25627119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 26598524 - 26598578
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctc 173  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| |||||||| ||||    
T  26598524 aacccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctc 26598578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 34984806 - 34984868
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||||||  || ||||||||||||||| | |||||||||||| ||||||| ||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggt 34984868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 22020938 - 22020882
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    ||||| ||||||||| | | |||||||| ||||||||||||||||||||| ||||||    
T  22020938 aaccctcttgggttggcatagtggtattagcttgggatctgggagtgtgctcctcct 22020882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 7918545 - 7918499
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtg 165  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtg 7918499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 12883844 - 12883902
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||| ||| |||| ||||||| | ||||||||||||||||||| |||||| |||||    
T  12883844 cacttggattgacctgatggtattaggttgggatctgggagtgtgctcctccttgaggt 12883902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 14285161 - 14285223
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||  |||| |||||||||| | |||||||||||| ||||||| ||||    
T  14285161 aacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggt 14285223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 16436622 - 16436679
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||| ||| ||||||||||||||||| || ||||||||| ||||||| ||||    
T  16436622 cacttgggttggcctagtggtattggcttggga-cttggagtgtgctcctcctcaaggt 16436679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 17028340 - 17028278
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| || ||||||| ||||||  ||||||||||| ||||||| ||||    
T  17028340 aacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggt 17028278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 43241754 - 43241696
Alignment:
Q  123 cacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||  || ||||||||| |||||||||| ||||||||||| |||| |||||    
T  43241754 cacttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggt 43241696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 32670703 - 32670655
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    ||||||| ||||||| ||||||||||||||||| |||| | ||||||||    
T  32670703 aacccacctgggttggcctggtggtattggcttaggattttggagtgtg 32670655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 10219 - 10278
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||| ||| ||||||||    
T  10219 aacccacttgggttggcctgatgatattggcttgggatctgggagtgcgcctctcctcga 10278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 157056 - 157001
Alignment:
Q  126 ttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||| |||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  157056 ttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggt 157001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 41709 - 41647
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||||||| ||| |||||||||||||| |||||| |||| ||| ||||||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggt 41647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 910 - 857
Alignment:
Q  125 cttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcga 178  Q
    |||||| || |||||||||||||||||||||||||||| ||||| |||||||||    
T  910 cttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcga 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 112281 - 112330
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtg 167  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  112281 caacccacttgggttggcctggttgtattggcttggaatctgggagtgtg 112330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 13123 - 13060
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||| ||||| ||||| | |||||||||||||||| ||||||||||||||| ||||||| ||||    
T  13123 caactcacttcggttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggt 13060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 32845 - 32782
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggtt 182  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| ||| || ||||||| |||||    
T  32845 aacccacttgggttggcctggtggtattggctgaggatctgggggtgcgctcctcctcaaggtt 32782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 15853 - 15791
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||  |||| |||||||||||||||||||||| | ||||| ||| ||||||| ||||    
T  15853 aacccacttaagttggcctggtggtattggcttgggattttggagtatgctcctcctcaaggt 15791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 95044 - 94985
Alignment:
Q  122 ccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||||||||| ||| ||||||||||||||| | |||||||||||| ||||||| ||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggt 94985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 2546 - 2484
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    |||||| ||||||||  | ||||||||||| || |||||||||||||||| ||||||| ||||    
T  2546 aacccatttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggt 2484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 47381 - 47427
Alignment:
Q  118 caacccacttgggttgtcctggtggtattggcttgggatctgggagt 164  Q
    |||||||||||||||  ||| ||||||||||||| ||||||||||||    
T  47381 caacccacttgggtttgccttgtggtattggcttaggatctgggagt 47427  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 19923 - 19861
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcctcgaggt 181  Q
    ||||||||||  ||| | || ||||||||||||||||||||||||| ||| |||||| |||||    
T  19923 aacccacttgaattggcatgatggtattggcttgggatctgggagtctgctcctccttgaggt 19861  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 5193 - 5249
Alignment:
Q  119 aacccacttgggttgtcctggtggtattggcttgggatctgggagtgtgcccctcct 175  Q
    |||||||||| |||||||| |||  ||||||||||||  ||||||||||| ||||||    
T  5193 aacccacttgagttgtcctagtgtaattggcttgggacttgggagtgtgctcctcct 5249  T

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