View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8912A_low_438 (Length: 201)

Name: NF8912A_low_438
Description: NF8912A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8912A_low_438
NF8912A_low_438
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-193)||(18068-18261)
[»] chr5 (14 HSPs)
chr5 (14-193)||(38144500-38144679)
chr5 (14-156)||(19512298-19512441)
chr5 (11-156)||(28370055-28370200)
chr5 (14-161)||(22751053-22751201)
chr5 (73-161)||(23528604-23528690)
chr5 (92-156)||(18407944-18408008)
chr5 (101-167)||(22438736-22438803)
chr5 (92-156)||(23111200-23111264)
chr5 (101-193)||(42961566-42961658)
chr5 (141-193)||(1856445-1856497)
chr5 (141-193)||(21674415-21674467)
chr5 (102-157)||(19236900-19236955)
chr5 (104-157)||(22461158-22461211)
chr5 (104-157)||(22467782-22467835)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-199)||(11241-11439)
[»] scaffold0924 (1 HSPs)
scaffold0924 (33-167)||(740-875)
[»] scaffold0026 (2 HSPs)
scaffold0026 (14-201)||(11805-11994)
scaffold0026 (11-157)||(111595-111741)
[»] chr7 (27 HSPs)
chr7 (11-160)||(14422893-14423043)
chr7 (14-161)||(18873272-18873420)
chr7 (5-167)||(12709833-12709995)
chr7 (5-167)||(13122904-13123066)
chr7 (14-156)||(15168087-15168230)
chr7 (14-152)||(10895795-10895934)
chr7 (11-156)||(16009486-16009631)
chr7 (16-167)||(13743623-13743774)
chr7 (59-154)||(16677252-16677348)
chr7 (59-154)||(17651488-17651584)
chr7 (73-167)||(12590633-12590725)
chr7 (73-167)||(13007405-13007497)
chr7 (101-199)||(21230917-21231015)
chr7 (101-156)||(11382871-11382926)
chr7 (101-156)||(11389348-11389403)
chr7 (101-167)||(20311039-20311107)
chr7 (93-156)||(13679485-13679548)
chr7 (142-199)||(14945066-14945123)
chr7 (142-199)||(15372659-15372716)
chr7 (102-157)||(2971254-2971309)
chr7 (102-157)||(20906461-20906516)
chr7 (102-156)||(11311059-11311113)
chr7 (121-162)||(831628-831669)
chr7 (121-162)||(1196808-1196849)
chr7 (121-162)||(34958578-34958619)
chr7 (101-185)||(148619-148703)
chr7 (100-156)||(46625961-46626017)
[»] chr6 (23 HSPs)
chr6 (1-201)||(18800337-18800537)
chr6 (11-167)||(10986170-10986327)
chr6 (14-180)||(29614124-29614291)
chr6 (11-156)||(4477766-4477912)
chr6 (11-156)||(23839107-23839253)
chr6 (59-167)||(930085-930192)
chr6 (14-156)||(23057850-23057993)
chr6 (73-180)||(12168336-12168440)
chr6 (73-180)||(19878429-19878533)
chr6 (73-167)||(19287245-19287337)
chr6 (43-180)||(19785847-19785982)
chr6 (73-180)||(19884205-19884309)
chr6 (73-157)||(34639986-34640069)
chr6 (73-157)||(34646660-34646743)
chr6 (101-199)||(24512801-24512899)
chr6 (73-157)||(25469704-25469785)
chr6 (85-157)||(31252406-31252478)
chr6 (104-156)||(9187498-9187550)
chr6 (100-156)||(25348486-25348542)
chr6 (100-154)||(25598643-25598697)
chr6 (91-154)||(21565214-21565278)
chr6 (100-156)||(25397172-25397228)
chr6 (100-156)||(19471335-19471391)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-154)||(14398-14552)
[»] chr3 (26 HSPs)
chr3 (1-154)||(24192855-24193009)
chr3 (11-157)||(23370505-23370652)
chr3 (11-156)||(9534237-9534382)
chr3 (14-156)||(14762758-14762901)
chr3 (16-154)||(20247791-20247930)
chr3 (14-154)||(38310802-38310943)
chr3 (47-180)||(16801444-16801576)
chr3 (74-167)||(41455087-41455178)
chr3 (73-157)||(24933828-24933910)
chr3 (95-156)||(18929239-18929300)
chr3 (92-156)||(17240513-17240577)
chr3 (141-193)||(24122221-24122273)
chr3 (102-157)||(13302240-13302295)
chr3 (102-157)||(13323787-13323842)
chr3 (141-193)||(13967762-13967814)
chr3 (141-193)||(13973237-13973289)
chr3 (82-157)||(10389443-10389518)
chr3 (82-157)||(10414532-10414607)
chr3 (82-157)||(10421202-10421277)
chr3 (102-157)||(12033444-12033499)
chr3 (102-157)||(13312896-13312951)
chr3 (102-157)||(17131732-17131787)
chr3 (102-157)||(51301589-51301644)
chr3 (142-170)||(14543478-14543506)
chr3 (142-170)||(16829104-16829132)
chr3 (142-170)||(16837626-16837654)
[»] chr2 (17 HSPs)
chr2 (18-180)||(26583744-26583904)
chr2 (11-156)||(6483627-6483772)
chr2 (11-156)||(6487094-6487239)
chr2 (11-156)||(19661454-19661599)
chr2 (73-157)||(5706023-5706106)
chr2 (92-156)||(23265133-23265197)
chr2 (92-156)||(23280201-23280265)
chr2 (95-156)||(21908353-21908414)
chr2 (142-193)||(6260135-6260186)
chr2 (91-154)||(23878997-23879060)
chr2 (67-166)||(26885148-26885246)
chr2 (92-156)||(23101463-23101528)
chr2 (91-154)||(23089057-23089121)
chr2 (100-156)||(24661576-24661632)
chr2 (102-157)||(10577-10632)
chr2 (102-157)||(25180929-25180984)
chr2 (149-193)||(19665037-19665081)
[»] scaffold0154 (1 HSPs)
scaffold0154 (83-201)||(30839-30957)
[»] chr1 (12 HSPs)
chr1 (11-156)||(20437024-20437170)
chr1 (83-180)||(41112017-41112112)
chr1 (92-156)||(32651563-32651627)
chr1 (92-156)||(18712790-18712854)
chr1 (101-156)||(19663517-19663572)
chr1 (100-156)||(20805320-20805376)
chr1 (101-156)||(11158093-11158148)
chr1 (100-154)||(10811785-10811839)
chr1 (102-157)||(20851132-20851187)
chr1 (102-157)||(20857759-20857814)
chr1 (102-157)||(21706276-21706331)
chr1 (102-157)||(21710818-21710873)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-180)||(111793-111960)
[»] scaffold0553 (1 HSPs)
scaffold0553 (11-157)||(10195-10342)
[»] scaffold0544 (1 HSPs)
scaffold0544 (11-157)||(1525-1672)
[»] chr8 (15 HSPs)
chr8 (11-157)||(44477532-44477678)
chr8 (11-157)||(44492690-44492836)
chr8 (5-167)||(23866518-23866680)
chr8 (11-154)||(8727735-8727879)
chr8 (73-167)||(17054564-17054656)
chr8 (92-156)||(23482053-23482117)
chr8 (100-156)||(18614271-18614327)
chr8 (101-199)||(14056521-14056619)
chr8 (101-193)||(27940815-27940907)
chr8 (100-156)||(39364919-39364975)
chr8 (101-167)||(25111976-25112042)
chr8 (102-156)||(29643386-29643440)
chr8 (141-193)||(30765873-30765925)
chr8 (102-157)||(24320670-24320725)
chr8 (100-156)||(21931696-21931752)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-180)||(206-368)
[»] scaffold1773 (1 HSPs)
scaffold1773 (14-164)||(1090-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (14-164)||(50091-50241)
[»] chr4 (11 HSPs)
chr4 (59-167)||(8045822-8045928)
chr4 (83-180)||(11848095-11848191)
chr4 (73-157)||(53483677-53483760)
chr4 (101-199)||(15408139-15408237)
chr4 (100-156)||(8834895-8834951)
chr4 (100-156)||(13888641-13888697)
chr4 (102-154)||(14486661-14486713)
chr4 (100-156)||(15245215-15245271)
chr4 (100-151)||(22724691-22724742)
chr4 (121-162)||(15747551-15747592)
chr4 (100-156)||(15308120-15308176)
[»] scaffold0117 (2 HSPs)
scaffold0117 (59-167)||(1887-1995)
scaffold0117 (59-167)||(8564-8672)
[»] scaffold0456 (2 HSPs)
scaffold0456 (86-161)||(916-991)
scaffold0456 (86-161)||(8061-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (73-163)||(45268-45357)
[»] scaffold0796 (2 HSPs)
scaffold0796 (73-162)||(1727-1814)
scaffold0796 (73-162)||(5750-5837)
[»] scaffold0107 (1 HSPs)
scaffold0107 (101-199)||(40489-40587)
[»] scaffold0235 (1 HSPs)
scaffold0235 (103-199)||(22550-22646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (101-199)||(135473-135571)
[»] scaffold0222 (1 HSPs)
scaffold0222 (92-156)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (92-156)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (101-167)||(17643-17710)
[»] scaffold0461 (1 HSPs)
scaffold0461 (92-156)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (92-156)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (92-156)||(101928-101992)
[»] scaffold0124 (1 HSPs)
scaffold0124 (101-156)||(34276-34331)
[»] scaffold0815 (1 HSPs)
scaffold0815 (105-167)||(1453-1515)
[»] scaffold2054 (1 HSPs)
scaffold2054 (67-167)||(680-780)
[»] scaffold0138 (1 HSPs)
scaffold0138 (100-156)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (93-156)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (101-156)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (79-166)||(493019-493105)
[»] scaffold0261 (1 HSPs)
scaffold0261 (102-167)||(23559-23624)
[»] scaffold0790 (1 HSPs)
scaffold0790 (135-167)||(5487-5519)
[»] scaffold0609 (1 HSPs)
scaffold0609 (85-157)||(5857-5929)
[»] scaffold0476 (1 HSPs)
scaffold0476 (91-154)||(3295-3359)
[»] scaffold0096 (1 HSPs)
scaffold0096 (100-160)||(39503-39563)
[»] scaffold0077 (1 HSPs)
scaffold0077 (91-154)||(3624-3688)
[»] scaffold0348 (1 HSPs)
scaffold0348 (102-157)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (102-157)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (102-157)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (102-156)||(1913-1967)
[»] scaffold0335 (1 HSPs)
scaffold0335 (100-156)||(2628-2684)
[»] scaffold0249 (2 HSPs)
scaffold0249 (149-193)||(2212-2256)
scaffold0249 (82-157)||(13894-13970)
[»] scaffold0067 (3 HSPs)
scaffold0067 (142-170)||(46718-46746)
scaffold0067 (142-170)||(55733-55761)
scaffold0067 (142-170)||(62119-62147)
[»] scaffold0005 (1 HSPs)
scaffold0005 (142-170)||(266108-266136)


Alignment Details
Target: scaffold0090 (Bit Score: 122; Significance: 8e-63; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 18068 - 18261
Alignment:
Q  1 tcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcagccct-aaccctcaatttattttccaaaaactatgcaattagg 99  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| |  ||| ||||||||||||||||||| ||| ||| |||||||||    
T  18068 tcacattacaaacagaattaacatgaccattaccatttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattagg 18167  T
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| ||| |||||||| ||||||    
T  18168 tcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaacacaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 38144679 - 38144500
Alignment:
Q  14 agaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaa 112  Q
    ||||||||||||| || ||||  ||||| |||||||| ||||||  |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  38144679 agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaat-tatgcaattaggtcaattttcagaa 38144581  T
Q  113 attatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  38144580 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 19512298 - 19512441
Alignment:
Q  14 agaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaa 112  Q
    ||||||||||||| || ||||  ||||| ||| |||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19512298 agaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaa 19512397  T
Q  113 attatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  19512398 attatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 28370200 - 28370055
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28370200 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 28370102  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  28370101 gaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 22751053 - 22751201
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  22751053 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 22751151  T
Q  112 aattatagattatgattattaagagatagtctcacccttaccttagtttt 161  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  22751152 aattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 23528604 - 23528690
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagtttt 161  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23528604 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 22438803 - 22438736
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttag-ttttgcagaa 167  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaa 22438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||| ||| ||||| || ||| |  | ||| ||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  141 tctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  141 tctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  104 ttttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  104 ttttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 11241 - 11439
Alignment:
Q  1 tcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatt-tattttccaaaaactatgcaattag 98  Q
    ||||||||||| |||||||||||||| || |||   |||||  ||||||| ||||||  ||||||||||||||| |||||||| ||||||| ||||||||    
T  11241 tcacattacaa-cagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttcc-aaaactaagcaattag 11338  T
Q  99 gtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctc 198  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||||    
T  11339 gtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctaggctc 11438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 33 - 167
Target Start/End: Complemental strand, 875 - 740
Alignment:
Q  33 ccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattatt 131  Q
    ||||||||| ||| |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  875 ccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattatt 776  T
Q  132 aagagatagtctcacccttaccttagttttgcagaa 167  Q
     |||||||||||||||||||||||||||||||||||    
T  775 gagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 107; Significance: 8e-54; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 11994 - 11805
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  ||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  11994 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaa-ctatgcaattaggtcaattttcaga 11896  T
Q  112 aattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagca-caatcgtttcctaggctctcc 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| |||  ||||| || |||||||||||    
T  11895 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagattatactgcatgaatcggtttctaggctctcc 11805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 111595 - 111741
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  111595 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 111693  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  111694 gaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 8e-54; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 14422893 - 14423043
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14422893 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttca 14422992  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttagttt 160  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14422993 gaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 18873272 - 18873420
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  18873272 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 18873370  T
Q  112 aattatagattatgattattaagagatagtctcacccttaccttagtttt 161  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  18873371 aattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 12709995 - 12709833
Alignment:
Q  5 attacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtca 102  Q
    |||||||| ||||||||||||| || |||| ||||| | ||| |||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  12709995 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtca 12709897  T
Q  103 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  12709896 attt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 13123066 - 13122904
Alignment:
Q  5 attacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtca 102  Q
    |||||||| ||||||||||||| || |||| ||||| | ||| |||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  13123066 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtca 13122968  T
Q  103 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13122967 attt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 15168087 - 15168230
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  15168087 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 15168185  T
Q  112 aattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  15168186 aattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 10895934 - 10895795
Alignment:
Q  14 agaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaa 112  Q
    ||||||||||||| || ||||  ||||| |||||||| ||||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||    
T  10895934 agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcaaaa 10895835  T
Q  113 attatagattatgattattaagagatagtctcacccttac 152  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  10895834 attatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 16009486 - 16009631
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcagccct-aaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  ||| ||||| |||||||| |||||||| | |||||||||||||||||||||    
T  16009486 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaacccacaatttatcttccaaaacc-atgcaattaggtcaattttca 16009584  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  16009585 gaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 13743623 - 13743774
Alignment:
Q  16 aattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaa 113  Q
    ||||||||||| || |||| ||||| | ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||    
T  13743623 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-caggaa 13743720  T
Q  114 ttatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  13743721 ttataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 16677252 - 16677348
Alignment:
Q  59 ccctaaccctcaattt-attttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 17651488 - 17651584
Alignment:
Q  59 ccctaaccctcaattt-attttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 12590725 - 12590633
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12590725 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 13007405 - 13007497
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13007405 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 21231015 - 21230917
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||  |||  |||||| ||||| ||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctct 21230917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 20311107 - 20311039
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttag--ttttgcagaa 167  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaa 20311039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  93 aattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||| |||||||||| |||||||| || ||||| ||| | ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 14945123 - 14945066
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||| |||||||||||| |  |||||| ||||| ||||||||||||    
T  14945123 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctaggctct 14945066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 15372716 - 15372659
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||| |||||||||||| |  |||||| ||||| ||||||||||||    
T  15372716 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctaggctct 15372659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||| ||||||| || | ||| |||||| ||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  121 ttatgattattaagagatagtctcacccttaccttagttttg 162  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  121 ttatgattattaagagatagtctcacccttaccttagttttg 162  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  121 ttatgattattaagagatagtctcacccttaccttagttttg 162  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 148619 - 148703
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatc 185  Q
    |||||||||||||  ||| ||||| || ||| |  | ||| ||||||||||||||||||||||||||  |||| ||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatc 148703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||| ||||||||| ||||| || ||| |||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 8e-54; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 18800337 - 18800537
Alignment:
Q  1 tcacattacaaacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatt-tattttccaaaaactatgcaattag 98  Q
    ||||||||||| |||||||||||||| || |||   |||||  ||||||| ||||||  ||||||||||||||| |||||||| ||||||| ||||||||    
T  18800337 tcacattacaa-cagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttcc-aaaactaagcaattag 18800434  T
Q  99 gtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctc 198  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| |||||| ||||| |||||||||||    
T  18800435 gtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttcctaggctc 18800534  T
Q  199 tcc 201  Q
    |||    
T  18800535 tcc 18800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10986327 - 10986170
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  10986327 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttta 10986228  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||  ||||||||    
T  10986227 gaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 29614291 - 29614124
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| ||| |||| ||||||  ||||||||||||||||||||| | |||| ||||||| ||||||||||||||||    
T  29614291 agaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcaga 29614192  T
Q  112 aattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagca 180  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  29614191 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 29614124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 4477766 - 4477912
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||| ||||| || ||||  ||||| |||||||| ||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  4477766 aacagaattagcatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttca 4477865  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  4477866 gaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 23839107 - 23839253
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| | |||||| ||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  23839107 aacagaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttca 23839206  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  23839207 gaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 930192 - 930085
Alignment:
Q  59 ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagt 158  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  930192 ccctaaccctcaatttatttttcaaaa-ctatacaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagt 930094  T
Q  159 tttgcagaa 167  Q
    |||||||||    
T  930093 tttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 23057850 - 23057993
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||||||     
T  23057850 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagg 23057948  T
Q  112 aattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  23057949 aattatagattatgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 12168336 - 12168440
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaatt 172  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  12168336 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aatt 12168432  T
Q  173 atacagca 180  Q
    | ||||||    
T  12168433 agacagca 12168440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 19878429 - 19878533
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaatt 172  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  19878429 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aatt 19878525  T
Q  173 atacagca 180  Q
    | ||||||    
T  19878526 agacagca 19878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 19287245 - 19287337
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19287245 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 19785982 - 19785847
Alignment:
Q  43 tcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagt 141  Q
    |||||||| ||||||  |||||||  ||| |||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  19785982 tcagaatcatcatcaaaccctaactttcattttattttccaaaa-ctattcaactaggtcaattt-cagaaattatagattatgattattgagagatagt 19785885  T
Q  142 ctcacccttaccttagttttgcagaagaattatacagca 180  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  19785884 ctcacccttaccttagttttgcagaa-aattagacagca 19785847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 73 - 180
Target Start/End: Original strand, 19884205 - 19884309
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaatt 172  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  19884205 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcaccctaaccttagttttgcagaa-aatt 19884301  T
Q  173 atacagca 180  Q
    | ||||||    
T  19884302 agacagca 19884309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 34640069 - 34639986
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34640069 ttattttccaaaa-ctattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 34646743 - 34646660
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34646743 ttattttccaaaat-tattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 24512899 - 24512801
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||| |||||||||  |||  |||||| ||||| ||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctct 24512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 25469785 - 25469704
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||| | || ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  25469785 ttattttccaaaacc-attcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 31252406 - 31252478
Alignment:
Q  85 aactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||||||    
T  31252406 aactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  104 ttttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||| || | ||| |||||| ||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||||||| |||| |||||||| ||| |||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 21565278 - 21565214
Alignment:
Q  91 gcaattaggtcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  21565278 gcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||||||| ||  |||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||| |||||||| ||  |||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 14552 - 14398
Alignment:
Q  1 tcacattacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattag 98  Q
    ||||||||||| |||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||    
T  14552 tcacattacaa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattag 14454  T
Q  99 gtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14453 gtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 5e-52; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 24192855 - 24193009
Alignment:
Q  1 tcacattacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattag 98  Q
    ||||||||||| |||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||    
T  24192855 tcacattacaa-cagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattag 24192953  T
Q  99 gtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24192954 gtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 23370652 - 23370505
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  23370652 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttca 23370553  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  23370552 gaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 9534237 - 9534382
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||  |||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9534237 aacagaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 9534335  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  9534336 gaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 14762901 - 14762758
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  14762901 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcaga 14762803  T
Q  112 aattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  14762802 aattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 20247930 - 20247791
Alignment:
Q  16 aattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaa 113  Q
    ||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  20247930 aattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaa 20247832  T
Q  114 ttatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  20247831 ttatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 38310943 - 38310802
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  38310943 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaatattcaga 38310845  T
Q  112 aattatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  38310844 aattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 47 - 180
Target Start/End: Complemental strand, 16801576 - 16801444
Alignment:
Q  47 aatcgtcatcagccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcac 146  Q
    |||| |||||| |||||||| |||||||  | | ||||| ||| ||||| |||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  16801576 aatcatcatcaaccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcac 16801478  T
Q  147 ccttaccttagttttgcagaagaattatacagca 180  Q
    |||||||||||||||||||||| |||| ||||||    
T  16801477 ccttaccttagttttgcagaaggattacacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 41455178 - 41455087
Alignment:
Q  74 tattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41455178 tattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 24933910 - 24933828
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24933910 ttattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  95 ttaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  141 tctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  141 tctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||||||||||  || | |||||||||||| ||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  141 tctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||||||||||  || | |||||||||||| ||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 10389518 - 10389443
Alignment:
Q  82 aaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||| ||||||| | | ||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  10389518 aaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 10414607 - 10414532
Alignment:
Q  82 aaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||| ||||||| | | ||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  10414607 aaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 10421277 - 10421202
Alignment:
Q  82 aaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||| ||||||| | | ||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  10421277 aaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||| |||||| | |||||||||||| | ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||| | ||||||||||||   ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 14543506 - 14543478
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaa 170  Q
    |||||||||||||||||||||||||||||    
T  14543506 ctcacccttaccttagttttgcagaagaa 14543478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 16829132 - 16829104
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaa 170  Q
    |||||||||||||||||||||||||||||    
T  16829132 ctcacccttaccttagttttgcagaagaa 16829104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 16837654 - 16837626
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaa 170  Q
    |||||||||||||||||||||||||||||    
T  16837654 ctcacccttaccttagttttgcagaagaa 16837626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 5e-52; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 26583744 - 26583904
Alignment:
Q  18 ttaacatgaccagtaccatttcccgtcagaatcgtcatca-gccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaatta 116  Q
    ||||||||| || |||| |||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  26583744 ttaacatgatcattaccctttcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagaaatta 26583841  T
Q  117 tagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagca 180  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26583842 tagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 26583904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 6483627 - 6483772
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6483627 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 6483725  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6483726 gaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 6487094 - 6487239
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6487094 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 6487192  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6487193 gaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 19661599 - 19661454
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  19661599 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttca 19661501  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||    
T  19661500 gaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 5706106 - 5706023
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||    
T  5706106 ttatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  95 ttaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 6260186 - 6260135
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    ||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  6260186 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 23878997 - 23879060
Alignment:
Q  91 gcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||  ||||||||| || || |||| | ||||||||||||||||||||||    
T  23878997 gcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 26885148 - 26885246
Alignment:
Q  67 ctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcaga 166  Q
    |||||||| || ||||| |||||| | ||||| | ||||||||||||||||| |||| ||||||| | ||||| || ||||||||||||||  |||||||    
T  26885148 ctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 23101528 - 23101463
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatg-attattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||||    
T  23101528 caattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 23089121 - 23089057
Alignment:
Q  91 gcaattaggtcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  23089121 gcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||||||| ||  |||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  149 ttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||  |||| |||||||||||| ||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 99; Significance: 4e-49; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 83 - 201
Target Start/End: Original strand, 30839 - 30957
Alignment:
Q  83 aaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcaca 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |    
T  30839 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaa 30938  T
Q  183 atcgtttcctaggctctcc 201  Q
    |||| ||||||||||||||    
T  30939 atcgattcctaggctctcc 30957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 4e-49; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 20437170 - 20437024
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||| ||||||||||| || ||||  ||||| |||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20437170 aacataattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttca 20437071  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  20437070 gaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 41112017 - 41112112
Alignment:
Q  83 aaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagca 180  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  41112017 aaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 41112112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||| | |||||||||  ||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||||||||| || | ||| |||||| ||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 111793 - 111960
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt-cag 110  Q
    ||||||||||||| || |||| ||||||| |||||||| ||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||| |||    
T  111793 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaatttttcag 111891  T
Q  111 aaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagca 180  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  111892 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 10342 - 10195
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10342 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttca 10243  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10242 gaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 1672 - 1525
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| |||||||| ||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  1672 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttca 1573  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1572 gaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 44477532 - 44477678
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44477532 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 44477630  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  44477631 gaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 44492690 - 44492836
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  ||||| ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44492690 aacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttca 44492788  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  44492789 gaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 167
Target Start/End: Original strand, 23866518 - 23866680
Alignment:
Q  5 attacaaacagaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtca 102  Q
    |||||||| ||||||||||||| || |||| ||||| | ||| |||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  23866518 attacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtca 23866616  T
Q  103 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  23866617 attt-caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 8727879 - 8727735
Alignment:
Q  11 aacagaattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 109  Q
    |||||||||||||||| || ||||  | ||| |||||||| || |||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8727879 aacagaattaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttca 8727780  T
Q  110 gaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||||||| || |||| ||||||||||||||    
T  8727779 gaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 17054564 - 17054656
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17054564 ttattttccaaaa-ctattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 18614271 - 18614327
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 14056619 - 14056521
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||| ||| | | ||| |||||| ||||||||||||||||||||||||| |||||||||  |||  ||| || ||||| ||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttcctaggctct 14056521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 27940907 - 27940815
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||| ||| ||||| || ||| |  | ||| ||||||||||||||||||||||||||  |||| |||||||||||| ||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||| || | ||| |||||| ||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 25111976 - 25112042
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    |||||||||||| ||| | | ||| |||||| ||||||||||||||||||||||||| |||| ||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaa 25112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||| | |||||||||||| | ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  141 tctcacccttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||||||||||  || | |||||||||||| ||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||| ||||| ||||| || ||| |||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 206 - 368
Alignment:
Q  16 aattaacatgaccagtaccatttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaat 114  Q
    ||||||||||| || ||||  ||||| |||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  206 aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagaaat 303  T
Q  115 tatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagca 180  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  304 tatagattatggttattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 1090 - 1240
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  1090 agaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagg 1187  T
Q  112 aattatagattatgattattaagagatagtctcacccttaccttagttttgca 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1188 aattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 50091 - 50241
Alignment:
Q  14 agaattaacatgaccagtacc-atttcccgtcagaatcgtcatcag-ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcaga 111  Q
    ||||||||||||| || |||| ||||||| ||| |||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||     
T  50091 agaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagg 50188  T
Q  112 aattatagattatgattattaagagatagtctcacccttaccttagttttgca 164  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50189 aattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 8045928 - 8045822
Alignment:
Q  59 ccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagt 158  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  8045928 ccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagt 8045831  T
Q  159 tttgcagaa 167  Q
    |||||||||    
T  8045830 tttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 11848095 - 11848191
Alignment:
Q  83 aaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagca 180  Q
    |||||||||| | ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  11848095 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 11848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 53483677 - 53483760
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  53483677 ttatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 15408139 - 15408237
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| | |||||||  |||  |||| | ||||| ||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttcctaggctct 15408237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttacct 154  Q
    ||||||||||||||||| |||||||| ||| |  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||| ||| ||| |||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcaccctta 151  Q
    |||||||||||||||| || | ||| |||||| |||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  121 ttatgattattaagagatagtctcacccttaccttagttttg 162  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||| ||| ||| |||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 1995 - 1887
Alignment:
Q  59 ccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  1995 ccctaaccctcaaattattttccaaaa-ctatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T
Q  158 ttttgcagaa 167  Q
    ||||||||||    
T  1896 ttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 167
Target Start/End: Complemental strand, 8672 - 8564
Alignment:
Q  59 ccctaaccctcaatttattttccaaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  8672 ccctaaccctcaaattattttccaaaa-ctatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T
Q  158 ttttgcagaa 167  Q
    ||||||||||    
T  8573 ttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 916 - 991
Alignment:
Q  86 actatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagtttt 161  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  916 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 8061 - 8136
Alignment:
Q  86 actatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagtttt 161  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8061 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 45357 - 45268
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgc 163  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  45357 ttatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 62; Significance: 5e-27; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 1814 - 1727
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttg 162  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1814 ttattttccaaaa-ctattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 5837 - 5750
Alignment:
Q  73 ttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttg 162  Q
    ||||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5837 ttattttccaaaa-ctattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 40587 - 40489
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||  |||  |||||| ||||| ||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctct 40489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 22646 - 22550
Alignment:
Q  103 attttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||| | |||||||||  |||  |||||| ||||| ||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttcctaggctct 22550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 135473 - 135571
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaagaattatacagcacaatcgtttcctaggctct 199  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||| |||||  |||  |||||| ||||| ||| ||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttcttaggctct 135571  T

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Target: scaffold0222 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0004 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

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Target: scaffold0310 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 17643 - 17710
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttaccttag-ttttgcagaa 167  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaa 17710  T

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Target: scaffold0461 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0146 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0020 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  92 caattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||| ||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||| | |||||||||  ||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  105 tttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    |||||||||||||| |||| ||| ||| |||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

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Target: scaffold2054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 680 - 780
Alignment:
Q  67 ctcaatttattttccaaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcag 165  Q
    |||||||||||||| || |||||| |  |||||| |||||| ||||||||||| |||| ||| ||| | ||||| || ||||||||||||||||||||||    
T  680 ctcaatttattttc-aagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcag 778  T
Q  166 aa 167  Q
    ||    
T  779 aa 780  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  93 aattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||| |||||||||| |||||||| || ||||| ||| | ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  101 caattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    |||||||||||||||||| |||| ||| ||| |||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 493105 - 493019
Alignment:
Q  79 tccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcaga 166  Q
    ||||| |||||| | ||||| | ||||||||||||||||| |||| ||||||| | ||||| |||||||||||||||||  |||||||    
T  493105 tccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 23624 - 23559
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttttgcagaa 167  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  ||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 5487 - 5519
Alignment:
Q  135 agatagtctcacccttaccttagttttgcagaa 167  Q
    |||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaa 5519  T

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Target: scaffold0609 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 5929 - 5857
Alignment:
Q  85 aactatgcaattaggtcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  5929 aactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 3359 - 3295
Alignment:
Q  91 gcaattaggtcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  3359 gcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttaccttagttt 160  Q
    ||||||||| ||||||||| |||||||| ||| |||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 3688 - 3624
Alignment:
Q  91 gcaattaggtcaattttcagaaattatagattatg-attattaagagatagtctcacccttacct 154  Q
    |||||||||||||||||| ||||||| | |||||  |||| | ||||||||||||||||||||||    
T  3688 gcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||| | ||||||||||||   ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||||||||||| ||||||| |||| | ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  102 aattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||||||| ||||||| |||| | ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  100 tcaattttcagaaattatagattatgattattaagagatagtctcacccttacctta 156  Q
    ||||||||||||| ||||| ||||| || ||| |||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  149 ttaccttagttttgcagaagaattatacagcacaatcgtttccta 193  Q
    |||||||||||||||||||  |||| |||||||||||| ||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 13970 - 13894
Alignment:
Q  82 aaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattaagagatagtctcacccttaccttag 157  Q
    ||||||||| ||||||| | |||||| ||||||||||| ||||| || ||| | ||||| || ||||||||||||||    
T  13970 aaaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 29; Significance: 0.0000003; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 46746 - 46718
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaa 170  Q
    |||||||||||||||||||||||||||||    
T  46746 ctcacccttaccttagttttgcagaagaa 46718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 55761 - 55733
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaa 170  Q
    |||||||||||||||||||||||||||||    
T  55761 ctcacccttaccttagttttgcagaagaa 55733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Complemental strand, 62147 - 62119
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaa 170  Q
    |||||||||||||||||||||||||||||    
T  62147 ctcacccttaccttagttttgcagaagaa 62119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 170
Target Start/End: Original strand, 266108 - 266136
Alignment:
Q  142 ctcacccttaccttagttttgcagaagaa 170  Q
    |||||||||||||||||||||||||||||    
T  266108 ctcacccttaccttagttttgcagaagaa 266136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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