View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8913_high_15 (Length: 249)
Name: NF8913_high_15
Description: NF8913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8913_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 3761013 - 3761255
Alignment:
| Q |
1 |
cgtcaccaaaaggaacaccaacttcagttaagctaagctttccccaaatatcatcgagtatcacaagaatcttgatctcctgcctaatcctttggcgtaa |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3761013 |
cgtcaccaaaaggaataccaacttcagttaagctaagctttccccaaatatcatcgagtatcacaagaatcttgatctcctgcctaatcctttggcgtaa |
3761112 |
T |
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| Q |
101 |
ccgactcgcccgtcccacctcagtcagctcatcaaactttagccctaacccatcagctatttcggatcgaatcgttctcacatcaggagaatttgtcact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3761113 |
ccgactcgcccgtcccacctcagtcagctcatcaaactttagccctaacccatcagctatttcggatcgaatcgttctcacatcaggagaatttgtcact |
3761212 |
T |
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| Q |
201 |
gtagccatcactaccacatcgaataaaccatctttctctgctt |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
3761213 |
gtagccatcactaccacatcgaataaaccatctttctcggctt |
3761255 |
T |
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