View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8913_low_14 (Length: 391)

Name: NF8913_low_14
Description: NF8913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8913_low_14
NF8913_low_14
[»] chr8 (15 HSPs)
chr8 (21-371)||(1171388-1171745)
chr8 (47-129)||(9935370-9935453)
chr8 (47-129)||(32890980-32891063)
chr8 (47-129)||(32897104-32897187)
chr8 (47-128)||(42992989-42993072)
chr8 (47-129)||(5542145-5542228)
chr8 (47-129)||(7771323-7771406)
chr8 (47-129)||(14799401-14799484)
chr8 (47-129)||(1882736-1882820)
chr8 (47-129)||(39727302-39727388)
chr8 (47-129)||(36819062-36819145)
chr8 (47-129)||(14418032-14418112)
chr8 (76-121)||(39689782-39689828)
chr8 (51-109)||(39735558-39735616)
chr8 (47-129)||(10705934-10706018)
[»] chr7 (13 HSPs)
chr7 (47-134)||(351877-351965)
chr7 (47-129)||(3817296-3817379)
chr7 (47-129)||(339462-339545)
chr7 (47-129)||(3811154-3811237)
chr7 (47-129)||(12804091-12804174)
chr7 (51-129)||(42767279-42767359)
chr7 (47-129)||(28420944-28421027)
chr7 (47-129)||(20239042-20239125)
chr7 (47-109)||(35148010-35148072)
chr7 (69-126)||(26381182-26381239)
chr7 (74-129)||(22741903-22741959)
chr7 (51-104)||(26383721-26383774)
chr7 (61-109)||(43540090-43540138)
[»] chr6 (11 HSPs)
chr6 (47-129)||(32035271-32035354)
chr6 (47-129)||(4580306-4580389)
chr6 (47-125)||(8650792-8650871)
chr6 (47-125)||(8662770-8662849)
chr6 (47-129)||(21190851-21190934)
chr6 (47-129)||(31756198-31756283)
chr6 (47-126)||(21782741-21782821)
chr6 (47-129)||(21197006-21197089)
chr6 (50-129)||(18778677-18778758)
chr6 (47-109)||(17581717-17581779)
chr6 (47-129)||(25354302-25354386)
[»] chr5 (17 HSPs)
chr5 (47-129)||(30384361-30384446)
chr5 (47-129)||(28525371-28525454)
chr5 (47-129)||(28531467-28531550)
chr5 (47-129)||(7389533-7389616)
chr5 (47-129)||(12686164-12686247)
chr5 (47-129)||(12692266-12692349)
chr5 (47-126)||(16215162-16215242)
chr5 (47-122)||(24054426-24054502)
chr5 (47-129)||(41297368-41297451)
chr5 (47-129)||(32096945-32097029)
chr5 (47-109)||(14610240-14610302)
chr5 (47-129)||(32094144-32094228)
chr5 (46-129)||(19066092-19066176)
chr5 (51-129)||(30772379-30772458)
chr5 (74-125)||(8706454-8706506)
chr5 (46-129)||(19059749-19059833)
chr5 (47-109)||(26509941-26510000)
[»] chr4 (16 HSPs)
chr4 (47-129)||(4632878-4632961)
chr4 (47-129)||(24288078-24288159)
chr4 (47-129)||(26956814-26956897)
chr4 (47-129)||(26963326-26963409)
chr4 (47-129)||(50168684-50168767)
chr4 (47-129)||(6257190-6257273)
chr4 (47-108)||(10733253-10733314)
chr4 (47-108)||(10739346-10739407)
chr4 (47-108)||(10947022-10947083)
chr4 (47-108)||(10953115-10953176)
chr4 (51-126)||(34308060-34308135)
chr4 (47-126)||(49976678-49976758)
chr4 (47-126)||(48161050-48161127)
chr4 (47-126)||(48167269-48167346)
chr4 (51-129)||(33458251-33458331)
chr4 (54-114)||(50156043-50156104)
[»] chr3 (23 HSPs)
chr3 (47-129)||(11839710-11839793)
chr3 (47-129)||(10238197-10238280)
chr3 (47-129)||(10244319-10244402)
chr3 (47-129)||(48128032-48128115)
chr3 (47-129)||(49151703-49151786)
chr3 (47-129)||(49157770-49157853)
chr3 (51-125)||(30051091-30051166)
chr3 (47-128)||(55003398-55003480)
chr3 (47-129)||(10766856-10766939)
chr3 (47-129)||(11846048-11846131)
chr3 (47-126)||(17055780-17055861)
chr3 (230-327)||(28706764-28706861)
chr3 (47-129)||(8331878-8331961)
chr3 (47-129)||(10760635-10760718)
chr3 (47-129)||(28964959-28965040)
chr3 (47-129)||(42191205-42191288)
chr3 (47-129)||(42197147-42197230)
chr3 (47-125)||(53069043-53069122)
chr3 (47-129)||(38449050-38449131)
chr3 (47-129)||(38455537-38455618)
chr3 (47-129)||(24643536-24643620)
chr3 (46-126)||(13445141-13445222)
chr3 (132-174)||(28706952-28706994)
[»] chr2 (14 HSPs)
chr2 (47-129)||(28682930-28683013)
chr2 (47-126)||(35090637-35090717)
chr2 (47-125)||(35084665-35084744)
chr2 (47-129)||(36750506-36750589)
chr2 (47-129)||(35438695-35438777)
chr2 (47-129)||(13456191-13456274)
chr2 (47-129)||(13462132-13462215)
chr2 (47-131)||(13149669-13149754)
chr2 (47-104)||(23343652-23343709)
chr2 (47-129)||(11048538-11048621)
chr2 (51-126)||(30965423-30965500)
chr2 (51-129)||(31002472-31002552)
chr2 (51-129)||(31008450-31008530)
chr2 (56-126)||(44716792-44716863)
[»] chr1 (11 HSPs)
chr1 (47-129)||(50306280-50306363)
chr1 (47-127)||(34740077-34740158)
chr1 (47-129)||(1078315-1078398)
chr1 (47-129)||(44410101-44410184)
chr1 (47-129)||(25381520-25381603)
chr1 (47-129)||(25387489-25387572)
chr1 (51-114)||(38151976-38152039)
chr1 (47-125)||(24963691-24963770)
chr1 (47-126)||(31058135-31058215)
chr1 (47-125)||(24926744-24926822)
chr1 (47-126)||(27955252-27955331)
[»] scaffold0440 (1 HSPs)
scaffold0440 (47-129)||(1178-1262)
[»] scaffold0236 (1 HSPs)
scaffold0236 (47-129)||(5626-5709)
[»] scaffold0012 (1 HSPs)
scaffold0012 (47-125)||(172879-172958)
[»] scaffold0363 (1 HSPs)
scaffold0363 (47-129)||(607-687)
[»] scaffold0208 (2 HSPs)
scaffold0208 (47-129)||(6614-6697)
scaffold0208 (47-129)||(12487-12570)
[»] scaffold1114 (1 HSPs)
scaffold1114 (53-129)||(1182-1259)
[»] scaffold0085 (1 HSPs)
scaffold0085 (47-127)||(38519-38600)


Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 21 - 371
Target Start/End: Original strand, 1171388 - 1171745
Alignment:
Q  21 ttatcttgataaatcaaacatgtcgtaatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttttattaaaaccta 120  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  1171388 ttatcttgataaatcaaatatgtcgtaatgttttgtttgcttccgcggttgaatcataattgttgaatatgtttcatgaaatctgttttattaagaccta 1171487  T
Q  121 aatttccaaaaatggaagcttaaaacaattatgcgtcatatgcaacttatgtggcgcattctccatttacaggaggagttaattgttccccat------- 213  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
T  1171488 aatttcaaaaaatggaagcttaaaacaattctgcgtcatatgcaacttatgtggcgcattctccatttacaggaggagttaattgttccccattgtgctg 1171587  T
Q  214 tgtttgtgatcatcacaatgagtcaattaaccatgtatttatgggttgtgattgggctaaaacagtttggtttgcatcacccttaggattaaattttact 313  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  1171588 tgtttgtgatcatcacaatgagtcaattaaccatgtatttatggattgtgattgggctaaagcagtttggtttgcatcacccttaggaataaattttact 1171687  T
Q  314 accaatggtgaagaaactttaaattttaatgaatggctaaccaaaattattattcatg 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1171688 accaatggtgaagaaactttaaattttaatgaatggctaaccaaaattattattcatg 1171745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 9935370 - 9935453
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  9935370 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttattaagacctaaatttccaa 9935453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 32890980 - 32891063
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  32890980 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 32891063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 32897104 - 32897187
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  32897104 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 32897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 42993072 - 42992989
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttcca 128  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||  ||||| |||||||||||||    
T  42993072 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttcca 42992989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 5542228 - 5542145
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | || |||||| ||| |||||||||||||||||||||    
T  5542228 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattataaaatctatttatattaaaacctaaatttccaa 5542145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 7771323 - 7771406
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  7771323 aatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 7771406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 14799484 - 14799401
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||| ||||| |||||| ||||||||||||||    
T  14799484 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttatattaagacctaaatttccaa 14799401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 1882820 - 1882736
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt--tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||  |||||||||||||  |||||| ||||||||||||||    
T  1882820 aatgttttgtttgcttccgctattgattcttaattgttgaacatgttctatgaaatctgttttatattaagacctaaatttccaa 1882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 39727388 - 39727302
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtt----ttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||| ||    ||||||| ||||||||||||||    
T  39727388 aatgttttgtttgcttccgttattgattcataattgttgaacatgttttatgaaatctatttttattattaagacctaaatttccaa 39727302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 36819062 - 36819145
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    |||||||||||||||||| || |||| ||||||||||||||||||| | |||| || ||||| |||||| ||||||||||||||    
T  36819062 aatgttttgtttgcttccactattgattcataattgttgaacatgtattatgagatttgtttatattaagacctaaatttccaa 36819145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 14418032 - 14418112
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| |||||   ||| ||||||||| |||||||||| ||||||||| ||||||||||||||    
T  14418032 aatgttttgtttgcttccgctattgattcata---gttaaacatgttttatgaaatctgtttttattaagacctaaatttccaa 14418112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 39689782 - 39689828
Alignment:
Q  76 ataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaa 121  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  39689782 ataattgttgaacatgttttatgaaatctgtttttattaaaacctaa 39689828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 39735616 - 39735558
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt 109  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||| ||||||||| ||||    
T  39735616 ttttatttacttccgctattgattcataattgttgaacatgttttatgaaatctatttt 39735558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 10705934 - 10706018
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    |||||||||||||||| |||| |||| | |  |||||| ||||||| | ||||||||||||||  ||||| ||||||||||||||    
T  10705934 aatgttttgtttgcttacgctattgatttacgattgttaaacatgtattatgaaatctgtttttaattaagacctaaatttccaa 10706018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 351877 - 351965
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaaaaatg 134  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| | |||||||||||| ||||    
T  351877 aatgttttgtttgcttccgctgttgattcataattgttgaacatgttttatgaaatctgtttatattaagagctaaatttccaacaatg 351965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 3817379 - 3817296
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  3817379 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 3817296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 339462 - 339545
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||| |||||| | ||||||||||||    
T  339462 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctctttatattaagagctaaatttccaa 339545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 3811237 - 3811154
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||| ||||||||    
T  3811237 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctacatttccaa 3811154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 12804091 - 12804174
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||| ||||||||||| |||| ||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  12804091 aatgttttgcttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttattaagacctaaatttccaa 12804174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 42767359 - 42767279
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||  ||||| ||||||||||||||    
T  42767359 ttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaa 42767279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 28421027 - 28420944
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||| ||| || | ||||||||||||    
T  28421027 aatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttatatcaagagctaaatttccaa 28420944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 20239042 - 20239125
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| ||||   || |||||||||||||||| ||||||| ||||| |||||| ||||||||||||||    
T  20239042 aatgttttgtttgcttccgctattgatgtatgattgttgaacatgttttatgaaatttgtttatattaagacctaaatttccaa 20239125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 35148072 - 35148010
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt 109  Q
    ||||||||||||||||||||| | || | ||||||||||||||||||| ||||||||||||||    
T  35148072 aatgttttgtttgcttccgctatcgatttataattgttgaacatgttttatgaaatctgtttt 35148010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 26381182 - 26381239
Alignment:
Q  69 ttgaatcataattgttgaacatgtttcatgaaatctgttttattaaaacctaaatttc 126  Q
    |||| ||||||||||||||||||| | ||||||||| ||||||| | |||||||||||    
T  26381182 ttgattcataattgttgaacatgtcttatgaaatctattttatttagacctaaatttc 26381239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 22741959 - 22741903
Alignment:
Q  74 tcataattgttgaacatgtttcatgaaatctgtt-ttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||||| ||||| ||||| | ||||||||||||||    
T  22741959 tcataattgttgaacatgttttatgaaacctgttcttattgagacctaaatttccaa 22741903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 26383721 - 26383774
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct 104  Q
    ||||||||| ||| | |||||| ||||||||||||||||||| | |||||||||    
T  26383721 ttttgtttgtttctgttgttgattcataattgttgaacatgtcttatgaaatct 26383774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 43540090 - 43540138
Alignment:
Q  61 ttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt 109  Q
    ||||||| |||| |||||||| |||||||||||  ||||||||||||||    
T  43540090 ttccgctattgattcataattattgaacatgttctatgaaatctgtttt 43540138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 32035354 - 32035271
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  32035354 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagacctaaatttccaa 32035271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 4580389 - 4580306
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  4580389 aatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 4580306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 8650871 - 8650792
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaattt 125  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| | ||||||||    
T  8650871 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagagctaaattt 8650792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 8662849 - 8662770
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaattt 125  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| | ||||||||    
T  8662849 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagagctaaattt 8662770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 21190934 - 21190851
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||| || ||| ||||||||||||||    
T  21190934 aatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaatctgtttataataagacctaaatttccaa 21190851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 31756283 - 31756198
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg---ttttattaaaacctaaatttccaa 129  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||   ||||||||| ||||||||||||||    
T  31756283 aatgttttatttgcttccgttgttgattcataattgttgaacatgttttatgaaatctgtttttttattaagacctaaatttccaa 31756198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 21782821 - 21782741
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||| | ||||||||||||| |||||| |||||||||||    
T  21782821 aatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttc 21782741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 21197089 - 21197006
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||| ||||| ||  ||||||||||||||    
T  21197089 aatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttactatgacctaaatttccaa 21197006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 18778677 - 18778758
Alignment:
Q  50 gttttgtttgcttccgctgttgaatcataattgttgaacatg-tttcatgaaatctgtttt-attaaaacctaaatttccaa 129  Q
    |||||||||||||||||| |||| |||||||| ||||||||| ||| ||||||| |||||| ||||| ||||||||||||||    
T  18778677 gttttgtttgcttccgctattgattcataattattgaacatgtttttatgaaatttgttttaattaagacctaaatttccaa 18778758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 17581717 - 17581779
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt 109  Q
    ||||||||||||||||||||| | || ||||||| ||||||||||||| ||||| | ||||||    
T  17581717 aatgttttgtttgcttccgctatcgattcataatagttgaacatgttttatgaattatgtttt 17581779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 25354302 - 25354386
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    |||| |||||||||||||||| |||| | |  |||||||||||||| | ||||||||||||||  ||||| | ||||||||||||    
T  25354302 aatgctttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagatctaaatttccaa 25354386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 30384446 - 30384361
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg---ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||||    
T  30384446 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttttattaaaacctaaatttccaa 30384361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 28525454 - 28525371
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  28525454 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 28525371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 28531550 - 28531467
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  28531550 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 28531467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 7389616 - 7389533
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||| ||||| |||||| ||||||||||||||    
T  7389616 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatttgtttatattaagacctaaatttccaa 7389533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 12686247 - 12686164
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||| ||| || | ||||||||||||    
T  12686247 aatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttatatcaagagctaaatttccaa 12686164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 12692349 - 12692266
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||| ||||||||||||| ||| || | ||||||||||||    
T  12692349 aatgttttgtttgcttccgctattgatttataattgttgaacatgttttatgaaatctgtttatatcaagagctaaatttccaa 12692266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 16215242 - 16215162
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||| | |||||||||| |||||| || |||||||||||    
T  16215242 aatgttttgtttgcttccgctattgattcataattgttgaatatgtgttatgaaatctgtttttataaagacctaaatttc 16215162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 24054426 - 24054502
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaa 122  Q
    ||||||||||||||||||||| | || | ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  24054426 aatgttttgtttgcttccgctatagatttataattgttgaacatgttttatgaaatctgtttttattaagacctaaa 24054502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 41297368 - 41297451
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||| | ||||||||| ||| |||||| ||| ||||||||||    
T  41297368 aatgttttgtttgcttctgctattgattcataattgttgaacatgtattatgaaatctctttatattaagacccaaatttccaa 41297451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 32097029 - 32096945
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | |  |||||||||||||| | ||||||||||||||  ||||| ||||||||||||||    
T  32097029 aatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaa 32096945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 14610240 - 14610302
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt 109  Q
    |||| ||| |||||||||||| || | ||||||||||||||||||||| ||||||||||||||    
T  14610240 aatggtttatttgcttccgctattaattcataattgttgaacatgttttatgaaatctgtttt 14610302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 32094228 - 32094144
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | |  |||||||||||||| | || |||||||||||  ||||| ||||||||||||||    
T  32094228 aatgttttgtttgcttccgctattgatttacgattgttgaacatgtattataaaatctgtttttaattaagacctaaatttccaa 32094144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 19066176 - 19066092
Alignment:
Q  46 taatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||||  ||| | ||||| |||||||||| || ||||||| || ||||||||| || |||||||||||    
T  19066176 taatgttttgtttgcttccgctaatgatttataatcgttgaacatggtttatgaaatatgtttttattaagacttaaatttccaa 19066092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 30772379 - 30772458
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaatttccaa 129  Q
    |||||||||||||| ||||| | |||||||| |||||||||||| ||||||| |  ||||||||| | ||||||||||||    
T  30772379 ttttgtttgcttccactgtttattcataattattgaacatgttttatgaaatttatttttattaagaactaaatttccaa 30772458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 8706506 - 8706454
Alignment:
Q  74 tcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaattt 125  Q
    ||||||||||||||||| ||| |||||||||  ||||||||| ||||||||||    
T  8706506 tcataattgttgaacatattttatgaaatctatttttattaagacctaaattt 8706454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 19059833 - 19059749
Alignment:
Q  46 taatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt-attaaaacctaaatttccaa 129  Q
    |||| |||||||||||||| ||  ||| | ||||| |||||| | |||| ||||||| |||||| ||||| ||||||||||||||    
T  19059833 taatattttgtttgcttcccctaatgatttataatcgttgaatacgttttatgaaatatgtttttattaagacctaaatttccaa 19059749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 26509941 - 26510000
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt 109  Q
    |||||||||||||||||| || ||   |||||||  |||||||||||| ||||||||||||||    
T  26509941 aatgttttgtttgcttccactatt---tcataatgattgaacatgttttatgaaatctgtttt 26510000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 4632878 - 4632961
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  4632878 aatgttttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctgtttttattaagacctaaatttccaa 4632961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 24288078 - 24288159
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||    
T  24288078 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatct-atttattaagacctaaatttccaa 24288159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 26956897 - 26956814
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    |||||||| |||||||||||| |||| ||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  26956897 aatgttttatttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttattaagacctaaatttccaa 26956814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 26963409 - 26963326
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||||||    
T  26963409 aatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatttgtttttattaagacctaaatttccaa 26963326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 50168684 - 50168767
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||| ||||| ||| ||||| |||||||||| ||||||||||||||    
T  50168684 aatgttttgtttgcttccgctattgattcataattgttgaacgtgttttatgtaatctggttttattaagacctaaatttccaa 50168767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 6257273 - 6257190
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    |||||||||||||||||||||||||| | || |||||||||||||| | ||||||||| ||| |||||| ||||||||||||||    
T  6257273 aatgttttgtttgcttccgctgttgatttatgattgttgaacatgtattatgaaatctatttatattaagacctaaatttccaa 6257190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 10733314 - 10733253
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt 108  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  10733314 aatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt 10733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 10739407 - 10739346
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt 108  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||||    
T  10739407 aatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttt 10739346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 10947083 - 10947022
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt 108  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  10947083 aatgttttatttgcttccgctattgattcataattgttgaacatgttttatgaaatctgttt 10947022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 10953176 - 10953115
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt 108  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||||    
T  10953176 aatgttttgtttgcttctgctattgattcataattgttgaacatgttttatgaaatctgttt 10953115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 34308135 - 34308060
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttttattaaaacctaaatttc 126  Q
    |||||| |||||||||| |||| |||||||| |||||||||||| || |||||||||||||||| || ||||||||    
T  34308135 ttttgtatgcttccgctattgattcataattattgaacatgttttataaaatctgttttattaagacgtaaatttc 34308060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 49976678 - 49976758
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttc 126  Q
    |||||||||||||||| |||| | || |||||||||||||| |||||| ||||||| || ||||||||||| |||||||||    
T  49976678 aatgttttgtttgctttcgctatcgattcataattgttgaatatgttttatgaaatttgtttttattaaaatctaaatttc 49976758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 48161050 - 48161127
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| |||| |||||   ||||||||| ||| |||||||||  ||||||||| |||||||||||    
T  48161050 aatgttttgtttgcttccgctattgattcata---gttgaacatattttatgaaatctatttttattaagacctaaatttc 48161127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 48167269 - 48167346
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| |||| |||||   ||||||||| ||| |||||||||  ||||||||| |||||||||||    
T  48167269 aatgttttgtttgcttccgctattgattcata---gttgaacatattttatgaaatctatttttattaagacctaaatttc 48167346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 33458331 - 33458251
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||| |||| | |  |||||||||||| | | ||||||||||||||  ||||| ||||||||||||||    
T  33458331 ttttgtttgcttccgctattgatttacgattgttgaacatatattatgaaatctgtttttaattaagacctaaatttccaa 33458251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 50156043 - 50156104
Alignment:
Q  54 tgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaa 114  Q
    ||||| |||||||| |||| ||||||||||||||||||||| ||  ||||| ||||||||||    
T  50156043 tgtttacttccgctattgattcataattgttgaacatgttttatataatctggttttattaa 50156104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 11839793 - 11839710
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  11839793 aatgttttgtttgcttccgctattgattcataattgttgaacatgtatcatgaaatctgtttatattaagacctaaatttccaa 11839710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 10238280 - 10238197
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||    
T  10238280 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagagctaaatttccaa 10238197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 10244402 - 10244319
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| | ||||||||||||    
T  10244402 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagagctaaatttccaa 10244319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 48128115 - 48128032
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  48128115 aatgttttgtttgtttccgctattgattcataattgttgaacatgtttcatgaaatctgtttttattgagacctaaatttccaa 48128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 49151703 - 49151786
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  49151703 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 49151786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 49157770 - 49157853
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  49157770 aatgttttgtttgcttccgctattgattcataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 49157853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 30051166 - 30051091
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaattt 125  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  30051166 ttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttattaagacctaaattt 30051091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 55003480 - 55003398
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttcca 128  Q
    |||||||| |||||||| ||| |||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  55003480 aatgttttatttgcttctgctattgattcataattgttgaacatgttttatgaaatctgtttttattaagacctaaatttcca 55003398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 10766939 - 10766856
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| | ||||||| || ||||| ||| ||||||||||||||    
T  10766939 aatgttttgtttgcttccgctgttgatttataattgttgaacatgtattatgaaatttgtttttaataagacctaaatttccaa 10766856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 11846131 - 11846048
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt-attaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||| | || ||||||||||| ||||| ||||||||||||||    
T  11846131 aatgttttgtttgcttccgctattgatttataattgttgaacatgtattataaaatctgttttaattaagacctaaatttccaa 11846048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 17055861 - 17055780
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg--ttttattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||| |||||| |||  ||||||||| |||||||||||    
T  17055861 aatgttttgtttgcttccgctattgattcataattgttgaacatattttatgaaaactgttttttattaagacctaaatttc 17055780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 327
Target Start/End: Complemental strand, 28706861 - 28706764
Alignment:
Q  230 aatgagtcaattaaccatgtatttatgggttgtgattgggctaaaacagtttggtttgcatcacccttaggattaaattttactaccaatggtgaaga 327  Q
    |||||||||||||| ||| |||||||||  |||||||||  ||||| |||||||||||||| ||||||| || | ||||||| |||||||| ||||||    
T  28706861 aatgagtcaattaatcatttatttatggactgtgattggattaaaatagtttggtttgcataacccttaagagttaattttaataccaatgatgaaga 28706764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 8331878 - 8331961
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||| || |||||| ||| |||||| | ||||||||||||    
T  8331878 aatgttttgtttgcttccgctattgatttataattgttgaacatgttttataaaatctatttatattaagagctaaatttccaa 8331961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 10760718 - 10760635
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    |||||||| |||||||||||| |||| | ||||||||||||||||| | |||||||||| ||||| ||| ||||||||||||||    
T  10760718 aatgttttatttgcttccgctattgatttataattgttgaacatgtattatgaaatctgtttttaataagacctaaatttccaa 10760635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 28964959 - 28965040
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||   |||||||||||||| ||||||||||||||  ||||| ||||||||||||||    
T  28964959 aatgttttgtttgcttccgctattgattcat---tgttgaacatgttttatgaaatctgtttttaattaagacctaaatttccaa 28965040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 42191288 - 42191205
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||| | ||||||||| ||| |||||| ||||| ||||||||    
T  42191288 aatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatattaagacctatatttccaa 42191205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 42197230 - 42197147
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||| | ||||||||| ||| |||||| ||||| ||||||||    
T  42197230 aatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatattaagacctatatttccaa 42197147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 53069122 - 53069043
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaattt 125  Q
    ||||||||||||||||||||| | || | ||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  53069122 aatgttttgtttgcttccgctatcgatttataattgttgaacatgttttataaaatctgtttttattaagacctaaattt 53069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 38449131 - 38449050
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||| | ||||||||| || |||||| ||| ||||||||||    
T  38449131 aatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatct-ttatattaagaccgaaatttccaa 38449050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 38455618 - 38455537
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||| | ||||||||| || |||||| ||| ||||||||||    
T  38455618 aatgttttgtttgcttccgctattgatttataattgttgaacatgtattatgaaatct-ttatattaagaccgaaatttccaa 38455537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 24643620 - 24643536
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgttt--catgaaatctgttttattaaaacctaaatttccaa 129  Q
    |||||||| ||| |||||||| |||| |||||| ||||||||||||||   ||||| | ||||||||||| ||||||||||||||    
T  24643620 aatgttttatttacttccgctattgattcataaatgttgaacatgttttatatgaagtttgttttattaagacctaaatttccaa 24643536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 13445141 - 13445222
Alignment:
Q  46 taatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaatttc 126  Q
    ||||||||| |||||||||||| |||| | ||||||||||||||||||  || ||||||  ||||||| | |||||||||||    
T  13445141 taatgttttatttgcttccgctattgatttataattgttgaacatgttctatcaaatctatttttatttagacctaaatttc 13445222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 28706994 - 28706952
Alignment:
Q  132 atggaagcttaaaacaattatgcgtcatatgcaacttatgtgg 174  Q
    ||||||||||||||| |||||| |||| |||||||||||||||    
T  28706994 atggaagcttaaaactattatgtgtcaaatgcaacttatgtgg 28706952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 28683013 - 28682930
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  28683013 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagacctaaatttccaa 28682930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 35090717 - 35090637
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  35090717 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagacctaaatttc 35090637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 35084744 - 35084665
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaattt 125  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  35084744 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagacctaaattt 35084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 36750506 - 36750589
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||| || |||||||||||    
T  36750506 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttttattaagacttaaatttccaa 36750589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 35438777 - 35438695
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttttattaaaacctaaatttccaa 129  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  35438777 aatgttttatttgcttccgctattgattcataactgttgaacatgttttatgaaatttgttttattaaggcctaaatttccaa 35438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 13456191 - 13456274
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||| | ||||||||| ||| |||||| ||||| ||||||||    
T  13456191 aatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatattaagacctatatttccaa 13456274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 13462132 - 13462215
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||| | ||||||||| ||| |||||| ||||| ||||||||    
T  13462132 aatgttttgtttgcttccgctattgattcacaattgttgaacatgtattatgaaatctatttatattaagacctatatttccaa 13462215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 13149754 - 13149669
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaaaa 131  Q
    ||||||||||||||||||||| |||| | |  |||||||||||||| | ||||||||||||| |||||| ||||||||||| ||||    
T  13149754 aatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttatattaagacctaaatttctaaaa 13149669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 23343652 - 23343709
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct 104  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||    
T  23343652 aatgttttgtttgcttccgctgttgattcgtaatcgttgaacatgttttatgaaatct 23343709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 11048621 - 11048538
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||| ||| |||| |||||||||||| |||||||| ||||||| |  ||||| ||| ||||||||||||||    
T  11048621 aatgttttgtttgcttcagctattgattcataattgttggacatgttttatgaaatttatttttaataagacctaaatttccaa 11048538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 30965423 - 30965500
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttc 126  Q
    ||||||||||||||||| |||| | || |||||||||||||| | ||||||||||||||  ||||| |||||||||||    
T  30965423 ttttgtttgcttccgctattgatttatgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttc 30965500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 31002472 - 31002552
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||| |||| | |  |||||||||||||| | ||||||||||||||  ||||| ||||||||||||||    
T  31002472 ttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaa 31002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 31008450 - 31008530
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||| |||| | |  |||||||||||||| | ||||||||||||||  ||||| ||||||||||||||    
T  31008450 ttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttttaattaagacctaaatttccaa 31008530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 44716863 - 44716792
Alignment:
Q  56 tttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttc 126  Q
    |||||||||||| |||| | ||||  ||||||||||||| |||| ||||| ||||||||| |||||||||||    
T  44716863 tttgcttccgctattgattgataaccgttgaacatgttttatgatatctgtttttattaagacctaaatttc 44716792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 50306280 - 50306363
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  50306280 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatattaagacctaaatttccaa 50306363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 34740077 - 34740158
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttcc 127  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||||    
T  34740077 aatgttttgtttgcttccgctattgattcataattgatgaacatgttttatgaaatctgtttatattaagacctaaatttcc 34740158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 1078315 - 1078398
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  1078315 aatgttttgtttgcttccgctattgattaataattgttgaacatgtattatgaaatctgtttatattaagacctaaatttccaa 1078398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 44410101 - 44410184
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||| ||||| ||| ||||||||||||||    
T  44410101 aatgttttgtttgcttccgctattgattcataatcgttgaacatgttttatgaaatctgtttttagtaagacctaaatttccaa 44410184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 25381603 - 25381520
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||| | ||||||||||||| |||||| ||||| ||||||||    
T  25381603 aatgttttgtttgcttccgctattgattcatagttgttgaacatgtattatgaaatctgtttatattaagacctatatttccaa 25381520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 25387572 - 25387489
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||||| |||||| | ||| ||||||||    
T  25387572 aatgttttgtttgcttccgctattgattcatatttgttgaacatgttttatgaaatctgtttatattaagatctatatttccaa 25387489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 38152039 - 38151976
Alignment:
Q  51 ttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttttattaa 114  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||||| |||||||||    
T  38152039 ttttgtttgcttccgctgttgattaataattgttgaacatgttttatgaaatctattttattaa 38151976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 24963770 - 24963691
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaattt 125  Q
    ||||||||||||||||||||| |||| ||||| | ||||||||||||| |||||||||| ||||||||| | ||||||||    
T  24963770 aatgttttgtttgcttccgctattgattcatattcgttgaacatgttttatgaaatctgtttttattaagatctaaattt 24963691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 31058135 - 31058215
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| |||| | |  |||||||||||||| | ||||||||||||| |||||| |||||||||||    
T  31058135 aatgttttgtttgcttccgctattgatttacgattgttgaacatgtattatgaaatctgtttatattaagacctaaatttc 31058215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 24926822 - 24926744
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaattt 125  Q
    ||||||||| ||||||||||| |||| ||||||| ||||||||||||| ||| |||||| ||||||||| ||||||||||    
T  24926822 aatgttttggttgcttccgctattgattcataatcgttgaacatgttttatg-aatctgtttttattaagacctaaattt 24926744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 27955252 - 27955331
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttc 126  Q
    ||||||||||||||||||||| ||| || || ||| || ||||||||| |||||||||| ||||||||| |||||||||||    
T  27955252 aatgttttgtttgcttccgctattg-attatgattattaaacatgttttatgaaatctgtttttattaagacctaaatttc 27955331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 1262 - 1178
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgtttt--attaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||    
T  1262 aatgttttgtttgcttccgcctttgattcataattgttgaacatgttttatgaaatctgtttttaattaagacctaaatttccaa 1178  T

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Target: scaffold0236 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 5626 - 5709
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||| || | ||||||||||||    
T  5626 aatgttttgtttgcttccgctattgattcataattgttgaacatgttttatgaaatctgtttatatcaagagctaaatttccaa 5709  T

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Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 172958 - 172879
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaattt 125  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||| |||||| |||||| |||||| ||||||||||    
T  172958 aatgttttgtttgcttccgctattgattcataattgtagaacatgttttatgaaacctgtttatattaagacctaaattt 172879  T

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Target: scaffold0363 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 687 - 607
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| |||||   ||| ||||||||| |||||||||| ||||||||| ||||||||||||||    
T  687 aatgttttgtttgcttccgctattgattcata---gttaaacatgttttatgaaatctgtttttattaagacctaaatttccaa 607  T

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Target: scaffold0208 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 6614 - 6697
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcat-aattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||| || ||||||| ||||| |||||| | ||||||||||||    
T  6614 aatgttttgtttgcttccgctattgattcataaattgttgaacatggtttatgaaat-tgtttatattaagagctaaatttccaa 6697  T

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Target: scaffold0208; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 12487 - 12570
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcat-aattgttgaacatgtttcatgaaatctgttt-tattaaaacctaaatttccaa 129  Q
    |||||||| |||||||||||| |||| |||| |||||||||| ||| || ||||||| ||||| |||||| | ||||||||||||    
T  12487 aatgttttatttgcttccgctattgattcataaattgttgaatatggtttatgaaat-tgtttatattaagagctaaatttccaa 12570  T

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Target: scaffold1114 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 1182 - 1259
Alignment:
Q  53 ttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatctg-ttttattaaaacctaaatttccaa 129  Q
    |||||||||| || | |||| ||||||| ||||||||||||| |||||||||| ||||||||| | || |||||||||    
T  1182 ttgtttgctttcgatattgattcataatggttgaacatgttttatgaaatctgtttttattaagatctgaatttccaa 1259  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 38519 - 38600
Alignment:
Q  47 aatgttttgtttgcttccgctgttgaatcataattgttgaacatgtttcatgaaatct-gttttattaaaacctaaatttcc 127  Q
    |||||||||||||||||| ||||||| |  ||||  |||||||||| | ||||||||| |||||||| || |||||||||||    
T  38519 aatgttttgtttgcttccactgttgatttctaatgattgaacatgtcttatgaaatctggttttatttaatcctaaatttcc 38600  T

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