View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8913_low_44 (Length: 243)
Name: NF8913_low_44
Description: NF8913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8913_low_44 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 45549548 - 45549783
Alignment:
| Q |
1 |
cctactcagtcagtgcttaccaaatcattggccgattcttgtaaatcttcactcttgccagcattgtacaacgtagaagtaggaagcagttcatgttctg |
100 |
Q |
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| T |
45549548 |
cctactcagtcagtgcttaccaaatcattggccgattcttgtaaatcttcactcttgccagaattgtacaacgtagaagtaggaagcagttcatgttctg |
45549647 |
T |
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| Q |
101 |
tgaatatgctaaaccttttttggtctgctccatttaagacattcaattttccagatgctctaccactagcttcttgttcatttcttctactcaacatttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45549648 |
tgaatatgctaaaccttttttggtctgctccatttaagacattcaattttccagatgctctaccactagcttcttgttcatttcttctactcaacatttg |
45549747 |
T |
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| Q |
201 |
ttcaatcttttcaggctttattttcttgatgtccat |
236 |
Q |
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|||||||||||||||||||||||||||| ||||||| |
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| T |
45549748 |
ttcaatcttttcaggctttattttcttgctgtccat |
45549783 |
T |
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