View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8917_low_10 (Length: 325)
Name: NF8917_low_10
Description: NF8917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8917_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 19 - 304
Target Start/End: Complemental strand, 3980140 - 3979855
Alignment:
| Q |
19 |
atgacaaattaaatatataatttactacaacataatgcctataaaatgagaatttggtttcattttgatacacacacaaatactcatacacaagtcatat |
118 |
Q |
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| T |
3980140 |
atgacaaattaaatatataatttactacaacataatgcctataaaatgagaatttagtttcattttgatacacacacaaatactcatacacaagtcatat |
3980041 |
T |
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| Q |
119 |
attataagtaataaagagaaagaagataaggagatgagcagcaataaagttatttgggttctcatgcttaccttggtggttttggctaccatatctcagg |
218 |
Q |
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| T |
3980040 |
attataagtaataaagagaaagaagataaggagatgagcagcaataaagttatttgggttctcatgcttaccttggtggttttggctaccatatctcagg |
3979941 |
T |
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| Q |
219 |
ccatttgtccagatggtaactatggtcaaccttgcaatggttttgataaaacatgttgtgataaatcgttagtttgtaatggggga |
304 |
Q |
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| T |
3979940 |
ccatttgtccagatggtaactatggtcaaccttgcaatggttttgataaaacatgttgtgataaatcgttagtttgtaatggggga |
3979855 |
T |
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