View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8917_low_6 (Length: 460)

Name: NF8917_low_6
Description: NF8917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8917_low_6
NF8917_low_6
[»] chr6 (22 HSPs)
chr6 (39-278)||(14085727-14085966)
chr6 (39-296)||(14048335-14048592)
chr6 (39-251)||(13861596-13861808)
chr6 (39-296)||(14016122-14016379)
chr6 (47-284)||(14111530-14111767)
chr6 (39-293)||(14026239-14026493)
chr6 (39-296)||(13891770-13892027)
chr6 (39-251)||(13471763-13471975)
chr6 (310-457)||(14025595-14025742)
chr6 (310-449)||(13892608-13892747)
chr6 (310-446)||(13932673-13932809)
chr6 (310-457)||(13472601-13472748)
chr6 (310-457)||(13912137-13912284)
chr6 (310-450)||(13874904-13875044)
chr6 (310-457)||(14015464-14015613)
chr6 (21-127)||(13942275-13942381)
chr6 (310-416)||(14110831-14110937)
chr6 (310-417)||(14047684-14047791)
chr6 (310-417)||(13862434-13862541)
chr6 (154-293)||(13933393-13933532)
chr6 (39-281)||(13874066-13874308)
chr6 (314-407)||(14085031-14085124)


Alignment Details
Target: chr6 (Bit Score: 160; Significance: 4e-85; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 14085966 - 14085727
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||||||  |||| ||||    
T  14085966 aaacaatttcatagaagaccttcaaacaattcttcaaaatttgtctagtggttgtgtcagaaactcacttcaagtgttagacctcagttataatggaatc 14085867  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
    ||||||||  || ||||||||||  ||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||| |||||||||||||||||    
T  14085866 actggaactttacccgacctttccgcattcacatcattgaaaacattggacctttctgaaaataagctgagtggaaagattcctgaaggtagtagcttgc 14085767  T
Q  239 catttcagttggagagtttatccattgcatcaaacacttt 278  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  14085766 catttcagttggagagtttatccattgcatcaaactcttt 14085727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 39 - 296
Target Start/End: Complemental strand, 14048592 - 14048335
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    |||||||||| ||||||||||| || ||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  14048592 aaacaatttccctgaagacctttaatcaattattcacaatttgtctagtggttgtgttagaaactcgtttcaagtgttagatctcagttttaatgaaatc 14048493  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
    |||||||   || ||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||| |||  ||||||| |||||||||    
T  14048492 actggaaatttagccgacttttctacatttacatcattaaaaacattagatctttcttataataagctgagtggaaaaattactgaaggtggtagcttgc 14048393  T
Q  239 catttcagttggagagtttatccattgcatcaaacactttagaagggttaattccaaa 296  Q
    |||||  ||| ||    |||||||||||||||||| ||||||||||| ||||||||||    
T  14048392 catttttgtttgaacagttatccattgcatcaaactctttagaaggggtaattccaaa 14048335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 39 - 251
Target Start/End: Original strand, 13861596 - 13861808
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||  |||||||||    
T  13861596 aaacaatttaacagaagaccttcaaataattcttcaaaatttgtctagtggttgtgttagaaactcactccaagtgttagatatcagttataatgaaatc 13861695  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
     |||||||  |  |||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||||||| |||||||||||||||||    
T  13861696 gctggaactttgcccgacctttctatattcacatcattgaaaacattggatctttcttctaatcaactaagtggaaagattcctgaaggtagtagcttgc 13861795  T
Q  239 catttcagttgga 251  Q
    |||||||||||||    
T  13861796 catttcagttgga 13861808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 39 - 296
Target Start/End: Complemental strand, 14016379 - 14016122
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    |||||||||||| ||||||||||||  |||| ||||| |||||||||||  |||||||||||||| ||||||||||||||| ||| |||  |||| ||||    
T  14016379 aaacaatttcacagaagaccttcaattaatttttcactatttgtctagtacttgtgttagaaactcacttcaagtgttagacctccgttctaatggaatc 14016280  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
    ||||||||  || |||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||||| ||||    
T  14016279 actggaactatacccgacctttctatattcacatcattgcaaacattggatctttcttataataagttgagtggaaagattcctgaaggtagtagattgc 14016180  T
Q  239 catttcagttggagagtttatccattgcatcaaacactttagaagggttaattccaaa 296  Q
    |||||||||||||   ||||||| |   |||||||||||||||||||  |||||||||    
T  14016179 catttcagttggaatatttatccgtccaatcaaacactttagaaggggaaattccaaa 14016122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 47 - 284
Target Start/End: Complemental strand, 14111767 - 14111530
Alignment:
Q  47 tcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatcactggaac 146  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||||    
T  14111767 tcactgaagaccttcaatcaattattcacaatttgtctagtggttgtgttagaaactcacttcaagtgttagaccttagtttcaatggaatcactggaac 14111668  T
Q  147 actatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgccatttcag 246  Q
    |||| | |||||||||| |||||||||||||||||||||| |||||||||  ||| |  | ||||||||||||| ||||| || || |||||||||||||    
T  14111667 actacctgacctttctatattcacatcattgaaaacattgcatctttcttccaatcaattgagtggaaagattcctgaagttactaccttgccatttcag 14111568  T
Q  247 ttggagagtttatccattgcatcaaacactttagaagg 284  Q
    ||||||| ||| ||||| | |  |||| ||||||||||    
T  14111567 ttggagactttctccatcgaaagaaactctttagaagg 14111530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 39 - 293
Target Start/End: Complemental strand, 14026493 - 14026239
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    |||||||||||  ||||| ||||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||||| ||||||   ||   ||||    
T  14026493 aaacaatttcaaagaagaacttcaaacagttcttcacaatttgtctggaggttgtgttagaaactcacttcaagtgttagacctcagtgataacagaatc 14026394  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||  ||| | ||||||||| |||| | ||  ||||||||| |||    
T  14026393 actggaacactacctgacctttctgcattcacatcattgaaaacattggatctttcttccaatcaactaagtggagagatccctgggggtagtagcctgc 14026294  T
Q  239 catttcagttggagagtttatccattgcatcaaacactttagaagggttaattcc 293  Q
    ||| |||||||||   ||||||||||||||||||||||||||||||| |||||||    
T  14026293 catatcagttggaacatttatccattgcatcaaacactttagaaggggtaattcc 14026239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 39 - 296
Target Start/End: Original strand, 13891770 - 13892027
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    ||||||||| || |||||||||||| ||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||| ||  |||  |||| ||||    
T  13891770 aaacaatttaacagaagaccttcaatcaattattcacaatttgtctggtggatgtgttagaaactcacttcaagtgttagaccttggttggaatggaatc 13891869  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
    ||||||  |||| ||||||||||| ||||||||||||||||||||||||||||| |||  ||| |  | |||||||| |||| |||||| ||||||||||    
T  13891870 actggaggactacccgacctttctgcattcacatcattgaaaacattggatcttactttaaatcaattgagtggaaaaattcttgaaggaagtagcttgc 13891969  T
Q  239 catttcagttggagagtttatccattgcatcaaacactttagaagggttaattccaaa 296  Q
    ||||||||||||||| |||||||||   ||||||| |||||||||||  |||||||||    
T  13891970 catttcagttggagaatttatccatcaaatcaaactctttagaagggggaattccaaa 13892027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 39 - 251
Target Start/End: Original strand, 13471763 - 13471975
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    ||||||||| ||||||||||| |||  |||| ||||||||||||||||||||||||||||||| | |||| ||||| || | ||| |||  |||| ||||    
T  13471763 aaacaatttaactgaagacctgcaattaattattcacaatttgtctagtggttgtgttagaaattcacttgaagtgctaaacctcggttggaatggaatc 13471862  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
    ||||||||  || |||  ||||||  |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  13471863 actggaactttacccggtctttctctattcacatcaatgaaaacattggatctttcttataataagctgagtggaaagattcctgaaggtagtagcttgc 13471962  T
Q  239 catttcagttgga 251  Q
    |||||||||||||    
T  13471963 catttcagttgga 13471975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 310 - 457
Target Start/End: Complemental strand, 14025742 - 14025595
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||     
T  14025742 aatctcaaaggattaattccaaatcttcaagtcaaaaatcgttgttctgttttatctctttcatcaaatgaatttgaagggcctattccaccatttctaa 14025643  T
Q  410 aaggttctatacttagtgatttgtccataaacaaattctctgcttctc 457  Q
    ||||||||| | ||| ||||||||||| |||||||||||||| |||||    
T  14025642 aaggttctacagttactgatttgtccaaaaacaaattctctgattctc 14025595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 310 - 449
Target Start/End: Original strand, 13892608 - 13892747
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||     
T  13892608 aatctcaaaggattaattccaaatcttcaagtcaaaaattattgttctattttatctctttcatcaaatgaatttgaagggcctattccaccatttctaa 13892707  T
Q  410 aaggttctatacttagtgatttgtccataaacaaattctc 449  Q
    ||||||||| ||||| ||| ||||||| ||||||||||||    
T  13892708 aaggttctacacttattgacttgtccaaaaacaaattctc 13892747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 310 - 446
Target Start/End: Complemental strand, 13932809 - 13932673
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||    
T  13932809 aatctcaaaggttcaattccaaatcttcaagtcaaaaatcactgttctcttttatctctttcatcaaatgaatttgaagggcctattccagcatttttac 13932710  T
Q  410 aaggttctatacttagtgatttgtccataaacaaatt 446  Q
    ||||||||  ||||| ||||||||||| |||||||||    
T  13932709 aaggttctgcacttattgatttgtccaaaaacaaatt 13932673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 310 - 457
Target Start/End: Original strand, 13472601 - 13472748
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||     
T  13472601 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttcttttttatatctttcatcaaatgaatttgaagggtccattccaccatttctaa 13472700  T
Q  410 aaggttctatacttagtgatttgtccataaacaaattctctgcttctc 457  Q
     |||||||  | ||| |||| |||||| ||| || ||||||| |||||    
T  13472701 gaggttcttcatttattgatctgtccaaaaataagttctctgattctc 13472748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 310 - 457
Target Start/End: Complemental strand, 13912284 - 13912137
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| |||||||| |||||||      
T  13912284 aatctcaaaggcttaattccaaatcttcaagtaaaaaatctttgttctgttttatcactttcatcaaatgaatttgaagggcccattccaccatttctca 13912185  T
Q  410 aaggttctatacttagtgatttgtccataaacaaattctctgcttctc 457  Q
    ||||||||| | ||| ||||||||||| |||||| ||||||| |||||    
T  13912184 aaggttctacagttattgatttgtccaaaaacaagttctctgattctc 13912137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 450
Target Start/End: Original strand, 13874904 - 13875044
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||||| |||||||      
T  13874904 aatctcaaaggattaattccgaatcttcatgtaaaaaatcattgttcttttttatctcttgcatcaaatcaatttgaaggctccattccaccatttctca 13875003  T
Q  410 aaggttctatacttagtgatttgtccataaacaaattctct 450  Q
     ||||||| ||  || ||||||||||| |||||||||||||    
T  13875004 gaggttctgtatctattgatttgtccaaaaacaaattctct 13875044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 310 - 457
Target Start/End: Complemental strand, 14015613 - 14015464
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttat--ctctttcatcaaatgaatttgaagggtccattccagcatttct 407  Q
    ||||||||||| | |||||||||||||||||| |||| | ||| || | ||||||  |||||||||||||||||||||||||| | ||||||||||||||    
T  14015613 aatctcaaaggttcaattccaaatcttcaagtcaaaattaattttttttttttatatctctttcatcaaatgaatttgaagggcctattccagcatttct 14015514  T
Q  408 acaaggttctatacttagtgatttgtccataaacaaattctctgcttctc 457  Q
    ||||||||||  ||||| ||||||||||| |||||||||||||| |||||    
T  14015513 acaaggttctgaacttattgatttgtccaaaaacaaattctctgattctc 14015464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 13942381 - 13942275
Alignment:
Q  21 ttctttaattctgtttcgaaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagat 120  Q
    |||||||| |||| ||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||     
T  13942381 ttctttaaatctgattcaaaacaatttcacagaagaccttcaaacaattcttcgcaatttgtctagcggttgtgttagaaactcacttcaagtgttagac 13942282  T
Q  121 ctcagtt 127  Q
    |||||||    
T  13942281 ctcagtt 13942275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 416
Target Start/End: Complemental strand, 14110937 - 14110831
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    |||||||||||| |||||||||||||||||||||||||| |||| |||  |||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  14110937 aatctcaaaggaataattccaaatcttcaagtaaaaaattattgctctagtttatctctttcattaaatgaatttgaagggcccattccaccatttctac 14110838  T
Q  410 aaggttc 416  Q
    |||||||    
T  14110837 aaggttc 14110831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 310 - 417
Target Start/End: Complemental strand, 14047791 - 14047684
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    |||||||||||||||||||||||||||||||  |||| ||| |||||| |||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  14047791 aatctcaaaggattaattccaaatcttcaagccaaaagtcaatgttcttttttatctctttcatcaaatgaatttgaagggtccactccaccttttctac 14047692  T
Q  410 aaggttct 417  Q
     |||||||    
T  14047691 taggttct 14047684  T

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Target: chr6; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 310 - 417
Target Start/End: Original strand, 13862434 - 13862541
Alignment:
Q  310 aatctcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttctac 409  Q
    ||||| ||||||| |||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  13862434 aatcttaaaggatcaattccaaatttaaaagtaaaaaatcactgttctcttttatctctttcatcaaatgattttgaagggcccattccaccatttctac 13862533  T
Q  410 aaggttct 417  Q
     |||||||    
T  13862534 gaggttct 13862541  T

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Target: chr6; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 13933532 - 13933393
Alignment:
Q  154 gacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgccatttcagttggaga 253  Q
    ||||||||| |||||||||||||||||||||||||||||||||  ||| | ||||||||| |||| | ||  ||||||||| |||||| |||||||||      
T  13933532 gacctttctgcattcacatcattgaaaacattggatctttcttccaatcaactaagtggagagatccctgggggtagtagcctgccatatcagttggaac 13933433  T
Q  254 gtttatccattgcatcaaacactttagaagggttaattcc 293  Q
     |||||||||  |||||||||||||||||||| |||||||    
T  13933432 atttatccatcacatcaaacactttagaaggggtaattcc 13933393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 281
Target Start/End: Original strand, 13874066 - 13874308
Alignment:
Q  39 aaacaatttcactgaagaccttcaaacaattcttcacaatttgtctagtggttgtgttagaaacttacttcaagtgttagatctcagtttcaatgaaatc 138  Q
    ||||||||||||  ||| ||||||| ||||| ||||  ||||||||||||||||||||||||||| |||||||  |||| ||||   ||  | | |||||    
T  13874066 aaacaatttcacccaaggccttcaatcaattattcatgatttgtctagtggttgtgttagaaactcacttcaatggttaaatctttattctagtaaaatc 13874165  T
Q  139 actggaacactatccgacctttctacattcacatcattgaaaacattggatctttcttataataagctaagtggaaagattcatgaaggtagtagcttgc 238  Q
    ||||||||  || | || |||||||  ||||||||||| |||   |||||||||||| |||||   || ||||||||||||| |||||||||||||||||    
T  13874166 actggaactgtacctgatctttctatgttcacatcattaaaatttttggatctttctaataatctactgagtggaaagattcctgaaggtagtagcttgc 13874265  T
Q  239 catttcagttggagagtttatccattgcatcaaacactttaga 281  Q
    ||| |||  ||||   ||| ||||||||| ||||| |||||||    
T  13874266 catgtcaaatggaagatttttccattgcagcaaactctttaga 13874308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 407
Target Start/End: Complemental strand, 14085124 - 14085031
Alignment:
Q  314 tcaaaggattaattccaaatcttcaagtaaaaaatcattgttctcttttatctctttcatcaaatgaatttgaagggtccattccagcatttct 407  Q
    ||||||||| |||||| ||||| ||  ||| |||| |||||||| |||||| ||| ||||||||||||||||||||  |||||||| |||||||    
T  14085124 tcaaaggatcaattccgaatctccacataagaaattattgttcttttttatttctgtcatcaaatgaatttgaaggtcccattccaccatttct 14085031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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