View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8919_low_48 (Length: 276)

Name: NF8919_low_48
Description: NF8919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8919_low_48
NF8919_low_48
[»] chr6 (26 HSPs)
chr6 (14-258)||(16838758-16839002)
chr6 (18-258)||(33330276-33330516)
chr6 (18-258)||(6005431-6005671)
chr6 (18-258)||(33335773-33336013)
chr6 (18-258)||(28155404-28155640)
chr6 (18-258)||(6438515-6438751)
chr6 (39-258)||(14737431-14737647)
chr6 (39-258)||(28184519-28184738)
chr6 (39-258)||(22010551-22010768)
chr6 (39-258)||(14742291-14742507)
chr6 (39-258)||(11856988-11857205)
chr6 (14-121)||(5343628-5343735)
chr6 (93-258)||(5674686-5674853)
chr6 (175-250)||(5572240-5572316)
chr6 (175-250)||(5757478-5757553)
chr6 (175-250)||(10077164-10077240)
chr6 (175-258)||(21801343-21801428)
chr6 (175-250)||(18232867-18232943)
chr6 (175-258)||(4629967-4630052)
chr6 (175-258)||(31086472-31086557)
chr6 (175-250)||(21356058-21356133)
chr6 (175-250)||(31979535-31979611)
chr6 (175-249)||(22963723-22963797)
chr6 (175-249)||(23824596-23824670)
chr6 (189-249)||(22709041-22709102)
chr6 (208-250)||(31936609-31936651)
[»] chr3 (49 HSPs)
chr3 (18-258)||(2676918-2677158)
chr3 (18-258)||(2672762-2673002)
chr3 (18-258)||(24968121-24968361)
chr3 (18-258)||(8512231-8512471)
chr3 (18-258)||(8517111-8517351)
chr3 (18-258)||(18656449-18656685)
chr3 (14-258)||(32475499-32475742)
chr3 (14-258)||(32480357-32480600)
chr3 (39-258)||(22173049-22173266)
chr3 (93-258)||(28503781-28503947)
chr3 (93-258)||(7167258-7167424)
chr3 (95-258)||(8738982-8739146)
chr3 (95-258)||(9091220-9091384)
chr3 (93-228)||(28501614-28501750)
chr3 (175-258)||(2671586-2671669)
chr3 (175-258)||(8477376-8477459)
chr3 (175-258)||(40372795-40372878)
chr3 (175-250)||(1736294-1736370)
chr3 (175-250)||(18552872-18552948)
chr3 (175-250)||(36029115-36029191)
chr3 (175-250)||(48438236-48438312)
chr3 (175-250)||(8370476-8370551)
chr3 (175-250)||(16264372-16264447)
chr3 (175-258)||(26928591-26928674)
chr3 (175-250)||(27974942-27975017)
chr3 (175-250)||(30709779-30709855)
chr3 (175-258)||(1305962-1306045)
chr3 (175-250)||(3715991-3716067)
chr3 (175-250)||(6794703-6794778)
chr3 (175-250)||(21711245-21711320)
chr3 (175-250)||(25795803-25795879)
chr3 (175-250)||(32143343-32143418)
chr3 (175-250)||(40592771-40592847)
chr3 (175-249)||(26299011-26299086)
chr3 (189-250)||(27986449-27986511)
chr3 (189-250)||(33386669-33386731)
chr3 (175-250)||(27452980-27453055)
chr3 (175-250)||(40844674-40844749)
chr3 (175-250)||(47923895-47923971)
chr3 (205-246)||(4386947-4386988)
chr3 (39-91)||(7167479-7167530)
chr3 (175-250)||(24695153-24695229)
chr3 (175-250)||(37466313-37466388)
chr3 (223-258)||(10207948-10207983)
chr3 (208-250)||(1417513-1417555)
chr3 (189-250)||(39039995-39040057)
chr3 (39-91)||(28501509-28501559)
chr3 (204-241)||(53894082-53894119)
chr3 (175-250)||(3323680-3323755)
[»] chr8 (33 HSPs)
chr8 (18-258)||(35745405-35745645)
chr8 (18-258)||(10684095-10684335)
chr8 (18-258)||(39784657-39784893)
chr8 (18-258)||(25328112-25328349)
chr8 (39-258)||(7289780-7289997)
chr8 (93-258)||(18853084-18853251)
chr8 (93-258)||(18870478-18870645)
chr8 (93-258)||(6311311-6311476)
chr8 (93-258)||(36979391-36979557)
chr8 (93-258)||(30655660-30655826)
chr8 (93-258)||(33037724-33037889)
chr8 (93-258)||(4759992-4760158)
chr8 (190-258)||(10689157-10689226)
chr8 (189-258)||(26287915-26287985)
chr8 (189-258)||(26301172-26301242)
chr8 (189-258)||(26313166-26313236)
chr8 (175-250)||(4456050-4456125)
chr8 (181-250)||(26403235-26403305)
chr8 (175-258)||(1261954-1262037)
chr8 (175-250)||(6127243-6127319)
chr8 (18-104)||(25327986-25328070)
chr8 (175-250)||(7412363-7412438)
chr8 (175-250)||(19175754-19175829)
chr8 (175-250)||(23799576-23799652)
chr8 (175-250)||(31071229-31071304)
chr8 (175-250)||(5702482-5702558)
chr8 (208-250)||(9765852-9765894)
chr8 (203-250)||(4696624-4696671)
chr8 (175-250)||(19752394-19752469)
chr8 (39-91)||(6311533-6311583)
chr8 (208-241)||(18810982-18811015)
chr8 (39-91)||(18870373-18870423)
chr8 (39-91)||(30655881-30655931)
[»] chr5 (37 HSPs)
chr5 (18-258)||(2785389-2785629)
chr5 (18-258)||(33791330-33791570)
chr5 (14-258)||(31396818-31397064)
chr5 (14-258)||(31401675-31401921)
chr5 (18-258)||(28807408-28807643)
chr5 (18-258)||(33768193-33768438)
chr5 (18-258)||(37556457-37556693)
chr5 (18-258)||(37561279-37561515)
chr5 (39-258)||(15044700-15044917)
chr5 (39-258)||(1457016-1457233)
chr5 (39-258)||(43592293-43592510)
chr5 (39-258)||(43598738-43598955)
chr5 (39-258)||(43604230-43604447)
chr5 (39-258)||(43609722-43609939)
chr5 (39-258)||(27449828-27450045)
chr5 (39-258)||(27444984-27445201)
chr5 (93-258)||(30631420-30631586)
chr5 (93-258)||(31180228-31180393)
chr5 (175-258)||(38192187-38192270)
chr5 (175-258)||(38219412-38219495)
chr5 (175-250)||(10281773-10281849)
chr5 (175-255)||(35387679-35387759)
chr5 (175-250)||(3880321-3880397)
chr5 (175-250)||(9353332-9353407)
chr5 (175-250)||(11916971-11917047)
chr5 (93-258)||(24135862-24136027)
chr5 (175-250)||(36932350-36932425)
chr5 (175-250)||(15464554-15464629)
chr5 (178-250)||(17003962-17004035)
chr5 (175-250)||(19588768-19588844)
chr5 (175-246)||(12084175-12084246)
chr5 (175-250)||(14520252-14520327)
chr5 (175-250)||(28832281-28832356)
chr5 (208-250)||(4410241-4410283)
chr5 (175-248)||(42127410-42127483)
chr5 (39-91)||(30631641-30631691)
chr5 (39-91)||(31180448-31180498)
[»] chr2 (37 HSPs)
chr2 (18-258)||(19344435-19344676)
chr2 (18-258)||(19349293-19349534)
chr2 (22-256)||(32246804-32247035)
chr2 (39-258)||(39811843-39812059)
chr2 (126-258)||(44312563-44312695)
chr2 (93-258)||(11098844-11099010)
chr2 (93-258)||(14291502-14291668)
chr2 (175-258)||(3491764-3491847)
chr2 (175-258)||(9296401-9296484)
chr2 (175-250)||(13569350-13569426)
chr2 (175-250)||(10445443-10445519)
chr2 (175-258)||(25398509-25398592)
chr2 (175-258)||(25403647-25403730)
chr2 (175-250)||(34388880-34388956)
chr2 (175-258)||(21629957-21630041)
chr2 (184-258)||(8040073-8040149)
chr2 (175-250)||(34682333-34682409)
chr2 (175-248)||(17865227-17865301)
chr2 (175-250)||(8390149-8390225)
chr2 (175-250)||(10707251-10707327)
chr2 (175-250)||(14699007-14699082)
chr2 (175-250)||(20522242-20522318)
chr2 (175-250)||(28259177-28259252)
chr2 (178-249)||(31056067-31056139)
chr2 (189-258)||(40738857-40738926)
chr2 (175-250)||(33118158-33118234)
chr2 (175-250)||(39482953-39483029)
chr2 (175-241)||(25407653-25407719)
chr2 (175-250)||(16940208-16940284)
chr2 (175-250)||(17010873-17010949)
chr2 (175-250)||(33528620-33528696)
chr2 (175-250)||(42039669-42039744)
chr2 (175-250)||(2869692-2869768)
chr2 (175-250)||(23078470-23078545)
chr2 (208-250)||(27149327-27149369)
chr2 (175-250)||(2838029-2838105)
chr2 (175-250)||(36757762-36757837)
[»] scaffold0197 (2 HSPs)
scaffold0197 (18-258)||(14140-14380)
scaffold0197 (14-258)||(18992-19236)
[»] chr7 (35 HSPs)
chr7 (18-258)||(24266033-24266273)
chr7 (14-258)||(24261150-24261394)
chr7 (18-258)||(19992327-19992565)
chr7 (14-258)||(16880087-16880331)
chr7 (14-258)||(16884943-16885186)
chr7 (18-258)||(21812071-21812309)
chr7 (39-258)||(31109438-31109654)
chr7 (39-258)||(24024181-24024397)
chr7 (39-258)||(12406345-12406562)
chr7 (39-258)||(12396925-12397142)
chr7 (93-258)||(20357464-20357630)
chr7 (186-258)||(4866744-4866816)
chr7 (93-258)||(1533360-1533527)
chr7 (93-258)||(2057979-2058146)
chr7 (175-258)||(18408777-18408860)
chr7 (175-258)||(21639822-21639905)
chr7 (175-250)||(29159825-29159901)
chr7 (175-250)||(21983306-21983383)
chr7 (175-250)||(2647695-2647771)
chr7 (175-258)||(18413654-18413736)
chr7 (175-258)||(21646020-21646103)
chr7 (175-250)||(46516309-46516385)
chr7 (175-250)||(49091683-49091759)
chr7 (175-248)||(33332449-33332523)
chr7 (175-250)||(55970-56045)
chr7 (175-249)||(44848684-44848758)
chr7 (175-249)||(35960839-35960914)
chr7 (175-250)||(2580412-2580487)
chr7 (175-250)||(4796666-4796742)
chr7 (175-250)||(9190008-9190083)
chr7 (208-250)||(20284111-20284153)
chr7 (208-250)||(28617258-28617300)
chr7 (39-91)||(20357359-20357409)
chr7 (39-90)||(4873310-4873359)
chr7 (175-250)||(5817269-5817344)
[»] chr1 (29 HSPs)
chr1 (18-258)||(43988293-43988535)
chr1 (18-258)||(25444923-25445160)
chr1 (18-258)||(39445514-39445750)
chr1 (18-258)||(44023708-44023944)
chr1 (18-258)||(1054846-1055082)
chr1 (39-254)||(41390599-41390811)
chr1 (39-254)||(41398254-41398466)
chr1 (18-165)||(25439730-25439875)
chr1 (93-258)||(24787281-24787447)
chr1 (175-258)||(24202769-24202852)
chr1 (175-250)||(16124515-16124591)
chr1 (175-250)||(19072950-19073026)
chr1 (175-250)||(19120840-19120916)
chr1 (175-250)||(27104371-27104447)
chr1 (175-250)||(47703935-47704011)
chr1 (175-250)||(26644897-26644972)
chr1 (175-250)||(29651833-29651909)
chr1 (175-250)||(3281730-3281805)
chr1 (175-250)||(9476283-9476359)
chr1 (175-250)||(13598420-13598496)
chr1 (175-258)||(19358843-19358926)
chr1 (175-258)||(19361432-19361515)
chr1 (175-258)||(19380072-19380155)
chr1 (175-249)||(13604623-13604697)
chr1 (175-241)||(21536569-21536635)
chr1 (186-250)||(775694-775759)
chr1 (178-250)||(37069792-37069864)
chr1 (175-250)||(32889461-32889536)
chr1 (175-250)||(47098824-47098899)
[»] scaffold0259 (1 HSPs)
scaffold0259 (18-258)||(2082-2322)
[»] scaffold0028 (1 HSPs)
scaffold0028 (18-258)||(148787-149027)
[»] chr4 (32 HSPs)
chr4 (18-258)||(3814038-3814274)
chr4 (18-258)||(5732679-5732915)
chr4 (18-258)||(45357130-45357367)
chr4 (18-258)||(18855741-18855977)
chr4 (18-258)||(45347650-45347888)
chr4 (39-258)||(9224261-9224478)
chr4 (39-258)||(9229048-9229265)
chr4 (39-258)||(51520471-51520688)
chr4 (139-258)||(56146664-56146782)
chr4 (93-258)||(24741954-24742120)
chr4 (94-258)||(29760655-29760821)
chr4 (175-250)||(10047401-10047477)
chr4 (175-250)||(39246016-39246092)
chr4 (175-249)||(16623292-16623367)
chr4 (175-250)||(36315229-36315304)
chr4 (175-250)||(36329438-36329513)
chr4 (175-250)||(38152438-38152514)
chr4 (181-250)||(24333831-24333901)
chr4 (189-258)||(28468542-28468612)
chr4 (175-250)||(3796518-3796594)
chr4 (175-250)||(5143281-5143357)
chr4 (175-250)||(16630679-16630755)
chr4 (175-250)||(5147699-5147775)
chr4 (175-250)||(5396671-5396746)
chr4 (189-250)||(5269204-5269266)
chr4 (178-250)||(6743417-6743490)
chr4 (175-250)||(31985634-31985708)
chr4 (175-250)||(3777571-3777646)
chr4 (208-250)||(39774338-39774380)
chr4 (46-91)||(29760875-29760919)
chr4 (175-234)||(5112275-5112335)
chr4 (39-98)||(18712620-18712677)
[»] scaffold0464 (1 HSPs)
scaffold0464 (18-258)||(377-613)
[»] scaffold0355 (2 HSPs)
scaffold0355 (55-258)||(9514-9713)
scaffold0355 (39-184)||(3703-3845)
[»] scaffold0135 (1 HSPs)
scaffold0135 (39-258)||(34916-35133)
[»] scaffold0009 (2 HSPs)
scaffold0009 (18-146)||(176808-176936)
scaffold0009 (196-258)||(181973-182035)
[»] scaffold0188 (2 HSPs)
scaffold0188 (175-258)||(17952-18035)
scaffold0188 (175-258)||(24045-24128)
[»] scaffold0148 (1 HSPs)
scaffold0148 (175-250)||(10751-10827)
[»] scaffold0140 (1 HSPs)
scaffold0140 (175-250)||(8419-8494)
[»] scaffold0006 (3 HSPs)
scaffold0006 (175-250)||(5705-5781)
scaffold0006 (175-250)||(2514-2590)
scaffold0006 (175-249)||(133280-133354)
[»] scaffold0036 (1 HSPs)
scaffold0036 (175-258)||(85696-85780)
[»] scaffold0087 (2 HSPs)
scaffold0087 (175-250)||(43961-44036)
scaffold0087 (175-250)||(36832-36907)
[»] scaffold0098 (1 HSPs)
scaffold0098 (203-249)||(45276-45322)
[»] scaffold0176 (1 HSPs)
scaffold0176 (175-249)||(17286-17361)
[»] scaffold0154 (1 HSPs)
scaffold0154 (208-241)||(11500-11533)


Alignment Details
Target: chr6 (Bit Score: 237; Significance: 1e-131; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 16839002 - 16838758
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16839002 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 16838903  T
Q  114 atgggaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggatt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16838902 atgggaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggatt 16838803  T
Q  214 ggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  16838802 ggagagctgctctctcccccagattaagccacattggctgaactg 16838758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 33330276 - 33330516
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330276 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 33330375  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330376 gaaaataccaaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 33330475  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  33330476 agctgctctctcccccagattaggccacattggctgaactg 33330516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 6005671 - 6005431
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  6005671 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgg 6005572  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6005571 gaaaataccaaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggag 6005472  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  6005471 agctgctctctcccccagattaggccacattggctgaactg 6005431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 33335773 - 33336013
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335773 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 33335872  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335873 gaaaataccaaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 33335972  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  33335973 agctgctctctcccccagattaggtcacattggctgaactg 33336013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 28155404 - 28155640
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||    
T  28155404 gggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaa--acattgtaatcaccttgggatttagggttcatagtgtgagagtgg 28155501  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| ||| |||||||||||||||    
T  28155502 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaa-agctaaattcttgtaac-cttttgtaacactttctcatattggattggag 28155599  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  28155600 agctgctctctcccccagattaggccacattggctgaactg 28155640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 6438751 - 6438515
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||  |||    
T  6438751 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggattttgggttcatagtgtgagagtgg 6438654  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  6438653 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggag 6438556  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6438555 agctgctctctcccccagattaggccatattggctgaactg 6438515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 14737431 - 14737647
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  14737431 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 14737528  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  14737529 ctagggtttgttcatatgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagat 14737626  T
Q  238 taggccatattggctgaactg 258  Q
    |||||||||||||||||||||    
T  14737627 taggccatattggctgaactg 14737647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 28184738 - 28184519
Alignment:
Q  39 ctttgatgagagtgtatcttaggtt-gggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga- 136  Q
    ||||| ||||||||| |||| |||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||     
T  28184738 ctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaa 28184639  T
Q  137 tctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  28184638 tctagggtttgttcatgtgtaaagcttgaag-gctagagtgttgtaac-cttttgtaacactttctcatattagattggagagctgctctctcccccaga 28184541  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  28184540 ttaggccatattggctgaactg 28184519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 22010551 - 22010768
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||| ||||| ||||||||||| |    
T  22010551 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtggggaaatatcaaagggtagaat 22010648  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  22010649 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 22010746  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  22010747 ttaggccatattggctgaactg 22010768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 14742291 - 14742507
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  14742291 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcactttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 14742388  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    ||||||||||||||| |||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| ||    
T  14742389 ctagggtttgttcatatgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaaat 14742486  T
Q  238 taggccatattggctgaactg 258  Q
    |||| ||||||||||||||||    
T  14742487 taggtcatattggctgaactg 14742507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 11857205 - 11856988
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||| ||| ||||||||||||| |    
T  11857205 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtggggaaacaccaaagggtagaat 11857108  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| |    
T  11857107 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccata 11857010  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  11857009 ttaggccatattggctgaactg 11856988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 5343735 - 5343628
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  5343735 agatgggatcctttggggtgtgttcctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagg 5343636  T
Q  114 atgggaaa 121  Q
     |||||||    
T  5343635 ttgggaaa 5343628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 5674686 - 5674853
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgtt-catgtgtaaagcttgaatagcta--gattcttgtaactctt 188  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| ||||||  ||||| | ||||||| ||||| | |||||  | |||||||||| |||    
T  5674686 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgca-agctattgtttcttgtaaccctt 5674783  T
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5674784 t-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 5674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 5572240 - 5572316
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||| |||||||| ||||||||    
T  5572240 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattgg 5572316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 5757478 - 5757553
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  5757478 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 5757553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 10077164 - 10077240
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||| ||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  10077164 ttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 10077240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 21801343 - 21801428
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 258  Q
    ||||||||||||||||||||||| || | | || |||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  21801343 ttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactg 21801428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 18232943 - 18232867
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| || ||||||| | ||||||||||||||||||||| ||||||||    
T  18232943 ttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattgg 18232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 4630052 - 4629967
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 258  Q
    ||||||||||| ||||||||||| |||| | || ||||||||||||||||||||| ||| |||||||| |||||||| ||||||||    
T  4630052 ttcttgtaactattttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactgaactg 4629967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 31086472 - 31086557
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 258  Q
    |||||||||||| |||||||||| |||| |||| |||||||||||| |||||||||||| |||||||  |||||||| ||||||||    
T  31086472 ttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactg 31086557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 21356133 - 21356058
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||  ||||||| |||| |||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  21356133 ttcttgtaactctta-gtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg 21356058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 31979611 - 31979535
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||| ||||| |||| | || |||||||||| ||||||||||||||||||||| | ||||||||    
T  31979611 ttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattgg 31979535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 22963797 - 22963723
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||| || |||||||    
T  22963797 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattg 22963723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 23824596 - 23824670
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||| || |||||||    
T  23824596 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattg 23824670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 22709102 - 22709041
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||  |||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattg 22709041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 31936651 - 31936609
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||||||||||||| |||||| |||| ||||||||    
T  31936651 tggattggagagctgctctctctcccagactaggtcatattgg 31936609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 2676918 - 2677158
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2676918 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 2677017  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2677018 gaaaataccaaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 2677117  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  2677118 agctgctctctcccccagattaggccacattggctgaactg 2677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 2672762 - 2673002
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2672762 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttaaggttcatagtgtgaggatgg 2672861  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2672862 gaaaataccaaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 2672961  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  2672962 agctgctctctcccccagattaggccacattggctgaactg 2673002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 24968361 - 24968121
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24968361 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 24968262  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24968261 gaaagtaccaaagggtagatctcgggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 24968162  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||| |||||||||| | |||| |||| |||||||||||||    
T  24968161 agctactctctccccaaaattaagccacattggctgaactg 24968121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 8512471 - 8512231
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  8512471 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 8512372  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| ||||||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8512371 gaaattaccaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 8512272  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  8512271 agctgctctctcccccagattaggccacattggctgaactg 8512231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 8517351 - 8517111
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  8517351 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 8517252  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| ||||||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8517251 gaaattaccaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 8517152  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  8517151 agctgctctctcccccagattaggccacattggctgaactg 8517111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 18656685 - 18656449
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| |||||| ||||||||||  |||    
T  18656685 gggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaa--acattgtaatcaccttgggattaagggtttatagtgtgagagtgg 18656588  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||| |||||||||||||||    
T  18656587 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaat-gctagagtcttgtaac-cttttgtaacactttctcatattggattggag 18656490  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18656489 agctgctctctcccccagattaggccatattggctgaactg 18656449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 32475742 - 32475499
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  32475742 agatgggatcctttggggtgtgttcctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgagg 32475643  T
Q  114 atgggaaa-ataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggat 212  Q
     |||||||  || |||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||    
T  32475642 ttgggaaatttatcaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactc-tttgtaa-acattcacatattggat 32475545  T
Q  213 tggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  32475544 tggagagctgctctctcccccagattaggccacattggctgaactg 32475499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 32480600 - 32480357
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  32480600 agatgggatcctttggggtgtgttcctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgagg 32480501  T
Q  114 atgggaaa-ataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggat 212  Q
     |||||||  || |||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||    
T  32480500 ttgggaaatttatcaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactc-tttgtaa-acattcacatattggat 32480403  T
Q  213 tggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  32480402 tggagagctgctctctcccccagattaggccacattggctgaactg 32480357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 22173049 - 22173266
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  22173049 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaggagagtggggaaacaccaaagggtagaat 22173146  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  22173147 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 22173244  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  22173245 ttaggccatattggctgaactg 22173266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 28503781 - 28503947
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctaga--ttcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| |||||||||| ||| |||||||||||||||  ||||||  |||||||||| ||||    
T  28503781 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaag-gctagagtttcttgtaac-cttt 28503878  T
Q  190 tgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28503879 tgtaacactttctcatattggattggagagctgctctcttccccagattaggccatattggctgaactg 28503947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 7167424 - 7167258
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||||||||||||||||| |||||||||||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  7167424 tttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 7167327  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7167326 -gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 7167258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 258
Target Start/End: Original strand, 8738982 - 8739146
Alignment:
Q  95 tagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttttg 191  Q
    ||||||||||| ||||||  |||| ||||||  | ||||||| ||||||| |||||| ||||||| |||||||  ||||  | |||||||||| |||| |    
T  8738982 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt-g 8739078  T
Q  192 taacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8739079 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 8739146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 258
Target Start/End: Original strand, 9091220 - 9091384
Alignment:
Q  95 tagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttttg 191  Q
    ||||||||||| ||||||  |||| ||||||  | ||||||| ||||||| |||||| ||||||| |||||||  ||||  | |||||||||| |||| |    
T  9091220 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt-g 9091316  T
Q  192 taacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9091317 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 9091384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 228
Target Start/End: Original strand, 28501614 - 28501750
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctaga--ttcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| |||||||||| ||| |||||||||||||||  ||||||  |||||||||| ||||    
T  28501614 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaag-gctagagtttcttgtaac-cttt 28501711  T
Q  190 tgtaacacattcacatattggattggagagctgctctct 228  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  28501712 tgtaacactttctcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 2671586 - 2671669
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2671586 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 2671669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 8477459 - 8477376
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8477459 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 8477376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 40372795 - 40372878
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40372795 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 40372878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 1736294 - 1736370
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  1736294 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 1736370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 18552872 - 18552948
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  18552872 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 18552948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 36029191 - 36029115
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  36029191 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattgg 36029115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 48438312 - 48438236
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  48438312 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 48438236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 8370476 - 8370551
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  8370476 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 8370551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 16264447 - 16264372
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  16264447 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 16264372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 26928591 - 26928674
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  26928591 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactg 26928674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 27974942 - 27975017
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  27974942 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 27975017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 30709779 - 30709855
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||  |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  30709779 ttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 30709855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 1306045 - 1305962
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| | || ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1306045 ttcttgtaacccttt-gtaacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactg 1305962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 3715991 - 3716067
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| | |||||||||||||||||||| || |||||||| ||||||||    
T  3715991 ttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattgg 3716067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 6794703 - 6794778
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  6794703 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgg 6794778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 21711320 - 21711245
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  21711320 ttcttgtaactcttt-gtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattgg 21711245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 25795879 - 25795803
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| | || | |||||||||||||||||||||||||||||||| ||||||||    
T  25795879 ttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattgg 25795803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 32143418 - 32143343
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  32143418 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 32143343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 40592771 - 40592847
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| | |||||||||||| ||||||||| ||||||||| ||||||||    
T  40592771 ttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattgg 40592847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 26299086 - 26299011
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||||||||||| |||| |||| | |||||||| ||||||||||||||||||||| | |||||||    
T  26299086 ttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattg 26299011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 27986449 - 27986511
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 27986511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 33386669 - 33386731
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 33386731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 27453055 - 27452980
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  27453055 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattgg 27452980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 40844749 - 40844674
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||| ||| |||||||||| |||||||||||| ||||||||    
T  40844749 ttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattgg 40844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 47923895 - 47923971
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||| ||| |||| |||| | ||||| || |||||||||||||| |||||||| ||||||||    
T  47923895 ttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattgg 47923971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 4386947 - 4386988
Alignment:
Q  205 tattggattggagagctgctctctcccccagattaggccata 246  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  4386947 tattggattggagagctgctctctcccccagagtaggtcata 4386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 7167530 - 7167479
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  7167530 ctttgttgagagtgtctcttgggttgggaaaa-aacattgtaatcaccttggg 7167479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 24695153 - 24695229
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| ||||  ||||| ||| | |||||||||||  |||||||| ||||||||    
T  24695153 ttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattgg 24695229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 37466388 - 37466313
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || |||||||||| ||| ||||||||||||||||||| ||||||||    
T  37466388 ttcttgtaactcatt-gtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattgg 37466313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 10207983 - 10207948
Alignment:
Q  223 ctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||| |||||||||||||    
T  10207983 ctctctcccccagattaggccacattggctgaactg 10207948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 1417513 - 1417555
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| | ||||||||||||||||||||| ||||||||    
T  1417513 tggattggagggatgctctctcccccagattaggtcatattgg 1417555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 39039995 - 39040057
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| |||| |||| |||||||||||| || ||||| |||||||||||| ||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattgg 39040057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 28501509 - 28501559
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  28501509 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 28501559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 53894119 - 53894082
Alignment:
Q  204 atattggattggagagctgctctctcccccagattagg 241  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  53894119 atattggattggagggctgctctctcccccagactagg 53894082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 3323680 - 3323755
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || |||||||||| |||| |||||| ||||||||||| ||||||||    
T  3323680 ttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgg 3323755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 35745645 - 35745405
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  35745645 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgg 35745546  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35745545 gaaaataccaaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggag 35745446  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  35745445 agctgctctctcccccagattaggccacattggctgaactg 35745405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 10684095 - 10684335
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  10684095 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 10684194  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| ||||||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684195 gaaattaccaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 10684294  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  10684295 agctgctctctcccccagattaggccacattggctgaactg 10684335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 39784657 - 39784893
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||  |||    
T  39784657 gggatcctatggggtgtgtgcctttgatgagagagtctcttaggttgggaaaa--acattgtaatcaccttgggattttgggttcatagtgtgagagtgg 39784754  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  39784755 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggag 39784852  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39784853 agctgctctctcccccagattaggccatattggctgaactg 39784893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 25328112 - 25328349
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||| |||||  ||||||||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||  ||||||  |||    
T  25328112 gggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtgg 25328209  T
Q  118 gaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattgga 216  Q
    | ||| ||||||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  25328210 ggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattgga 25328307  T
Q  217 gagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25328308 gagctgctctctcccccagattaggccatattggctgaactg 25328349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 7289780 - 7289997
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||| ||| ||||||||||||| |    
T  7289780 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtggggaaacaccaaagggtagaat 7289877  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
     ||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  7289878 atagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 7289975  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  7289976 ttaggccatattggctgaactg 7289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 18853084 - 18853251
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||||||||||||||| | |||||||||||||| ||||||| |||||||| ||||  | |||||||||| ||||    
T  18853084 tttagggttcatattgtgagagtggggaaataccaaagggtaaaatctagggtttgttcttgtgtaa-gcttgaat-gctattgtttcttgtaacccttt 18853181  T
Q  190 tgtaacacattcac-atattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18853182 tgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggctgaactg 18853251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 18870478 - 18870645
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||  | |||||||||| ||||    
T  18870478 tttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaat-gctattgtttcttgtaacccttt 18870575  T
Q  190 tgtaacacattcac-atattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18870576 tgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggatgaactg 18870645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 6311476 - 6311311
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctaga--ttcttgtaactcttt 189  Q
    ||||||||||||  ||||||  |||| ||| ||||||||||||| |||||||||||| | |||||||||||||||  ||||||  |||||||||| ||||    
T  6311476 tttagggttcatcttgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaag-gctagagtttcttgtaac-cttt 6311380  T
Q  190 tgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311379 tgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 6311311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 36979557 - 36979391
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| |||||||||||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  36979557 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 36979460  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979459 -gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 36979391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 30655826 - 30655660
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| |||||||||||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  30655826 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 30655729  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30655728 -gtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattggctgaactg 30655660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 33037724 - 33037889
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||  | ||||||| |||||||||||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  33037724 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 33037821  T
Q  190 tgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33037822 -gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 33037889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 4759992 - 4760158
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||  | ||||||| ||||||| |||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  4759992 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 4760089  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4760090 -gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactg 4760158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 10689157 - 10689226
Alignment:
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10689157 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 10689226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 26287985 - 26287915
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 26287915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 26301242 - 26301172
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 26301172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 26313236 - 26313166
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 26313166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 4456125 - 4456050
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  4456125 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 4456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 26403235 - 26403305
Alignment:
Q  181 taactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  26403235 taactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 26403305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 1261954 - 1262037
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  1261954 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactg 1262037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 6127319 - 6127243
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| ||||| |||||| ||||||||    
T  6127319 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattgg 6127243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 25327986 - 25328070
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcat 104  Q
    |||||||| |||| |||||  ||||||||||||||| |||| ||||||||||  |||||||||||||||||||| ||||||||||||    
T  25327986 gggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaa--aacattgtaatcaccttgggttttagggttcat 25328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 7412438 - 7412363
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  7412438 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgg 7412363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 19175754 - 19175829
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  19175754 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattgg 19175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 23799576 - 23799652
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||| ||| |||||| ||||||||    
T  23799576 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattgg 23799652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 31071229 - 31071304
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  31071229 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 31071304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 5702482 - 5702558
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||| | |||||||||||||| |||||| ||||||||    
T  5702482 ttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattgg 5702558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 9765852 - 9765894
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattgg 9765894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 4696624 - 4696671
Alignment:
Q  203 catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  4696624 catagtggattggagggctgctctctcccccagattaggtcatattgg 4696671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 19752394 - 19752469
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||||||||| ||| |||| ||||||||    
T  19752394 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattgg 19752469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 6311583 - 6311533
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  6311583 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 6311533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 241
Target Start/End: Original strand, 18810982 - 18811015
Alignment:
Q  208 tggattggagagctgctctctcccccagattagg 241  Q
    |||||||||| |||||||||||||||||||||||    
T  18810982 tggattggagggctgctctctcccccagattagg 18811015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 18870373 - 18870423
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  18870373 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 18870423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 30655931 - 30655881
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  30655931 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 30655881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 2785629 - 2785389
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  2785629 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgg 2785530  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2785529 gaaaataccaaagggtaggtctagggtttgttcatgagtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggag 2785430  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  2785429 agctgctctctcccccagattaggccacattggctgaactg 2785389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 33791570 - 33791330
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  33791570 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgg 33791471  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791470 gaaaataccaaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggag 33791371  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  33791370 agctgctctttcccccagattaggccacattggctgaactg 33791330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 31396818 - 31397064
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  31396818 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagg 31396917  T
Q  114 atgggaaaataccaaagggtagatctagggtttgt--tcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattgga 211  Q
    |||||||||| |||||||||||||||||||||| |  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  31396918 atgggaaaatgccaaagggtagatctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattgga 31397017  T
Q  212 ttggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31397018 ttggagagctgctctctcccccagattaggccacattggctgaactg 31397064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 31401675 - 31401921
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  31401675 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagg 31401774  T
Q  114 atgggaaaataccaaagggtagatctagggtttgt--tcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattgga 211  Q
    |||||||||| ||||||||||||||||| |||| |  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  31401775 atgggaaaatgccaaagggtagatctagagttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattgga 31401874  T
Q  212 ttggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  31401875 ttggagagctgctctctcccccatattaggccacattggctgaactg 31401921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 28807408 - 28807643
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||  |||    
T  28807408 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaa--acattgtaatcaccttgggattttgggttcatagtgtgagagtgg 28807505  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  28807506 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaa-agctagattcttgtaac-cttttgtaacac-ttcacatattggattggag 28807602  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  28807603 agctgctctctcccccagattaggccacattggctgaactg 28807643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 33768438 - 33768193
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtga---gga 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||    ||     
T  33768438 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattattggttcatagtgtggaggggt 33768339  T
Q  115 tgggaaaatacc--aaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggat 212  Q
     ||||||||| |  ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33768338 agggaaaataaccgaaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggat 33768239  T
Q  213 tggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  33768238 tggagagctgctctcccccccagattaggccacattggctgaactg 33768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 37556457 - 37556693
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||  |||    
T  37556457 gggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttgggaaaaca---ttgtaatcaccttgggattttgggttcatagtgtgagagtgg 37556553  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  37556554 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagatacttgtaac-cttttgtaacactttcacatattggattggag 37556652  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37556653 agctgctctctcccccagattaggccacattggctgaactg 37556693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 37561279 - 37561515
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||  |||    
T  37561279 gggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttgggaaaaca---ttgtaatcaccttgggattttgggttcatagtgtgagagtgg 37561375  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  37561376 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagatacttgtaac-cttttgtaacactttcacatattggattggag 37561474  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37561475 agctgctctctcccccagattaggccacattggctgaactg 37561515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 15044917 - 15044700
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||| || ||| |||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  15044917 ctttgttgagagtgtctcttgggtttgggaaa-aacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 15044819  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| ||    
T  15044818 ctagggtttgttcatgtgtaaagcttgaa-agctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccatat 15044721  T
Q  238 taggccatattggctgaactg 258  Q
    |||||||||||||||||||||    
T  15044720 taggccatattggctgaactg 15044700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 1457016 - 1457233
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||| ||| ||||||||||||| |    
T  1457016 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgagagtggggaaacaccaaagggtagaat 1457113  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  1457114 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 1457211  T
Q  237 ttaggccatattggctgaactg 258  Q
    |||||||| |||||||||||||    
T  1457212 ttaggccacattggctgaactg 1457233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 43592510 - 43592293
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  43592510 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaat 43592413  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  43592412 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 43592315  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  43592314 ttaggccatattggctgaactg 43592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 43598955 - 43598738
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  43598955 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaat 43598858  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  43598857 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 43598760  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  43598759 ttaggccatattggctgaactg 43598738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 43604447 - 43604230
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  43604447 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaat 43604350  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  43604349 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 43604252  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  43604251 ttaggccatattggctgaactg 43604230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 43609939 - 43609722
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  43609939 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaat 43609842  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  43609841 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 43609744  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  43609743 ttaggccatattggctgaactg 43609722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 27450045 - 27449828
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  27450045 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaat 27449948  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  27449947 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 27449850  T
Q  237 ttaggccatattggctgaactg 258  Q
    |||||| |||||||||||||||    
T  27449849 ttaggctatattggctgaactg 27449828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 27445201 - 27444984
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  27445201 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaat 27445104  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  27445103 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 27445006  T
Q  237 ttaggccatattggctgaactg 258  Q
    |||||| |||||| ||||||||    
T  27445005 ttaggctatattgcctgaactg 27444984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 30631586 - 30631420
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctaga--ttcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| |||| |||||||||||||||||||||||||  ||||||  |||||||||| ||||    
T  30631586 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaag-gctagagtttcttgtaacccttt 30631488  T
Q  190 tgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30631487 -gtaacactttctcatattggattggagagctgctctctcccccagattaggccacattggctgaactg 30631420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 31180393 - 31180228
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctaga--ttcttgtaactcttt 189  Q
    |||| |||||||| ||||||  |||| ||| ||||||||||||| |||||||||||| | |||||||||||||||  ||||||  |||||||||| ||||    
T  31180393 tttatggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaag-gctagagtttcttgtaacccttt 31180296  T
Q  190 tgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180295 -gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 31180228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 38192270 - 38192187
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38192270 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 38192187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 38219495 - 38219412
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38219495 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 38219412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 10281849 - 10281773
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  10281849 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattgg 10281773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 35387759 - 35387679
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaa 255  Q
    |||||||||| |||| ||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  35387759 ttcttgtaacccttt-gtaacactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaa 35387679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 3880397 - 3880321
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| || ||||||||| ||||||||    
T  3880397 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattgg 3880321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 9353332 - 9353407
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  9353332 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 9353407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 11916971 - 11917047
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  11916971 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattgg 11917047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 24136027 - 24135862
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctagatt-cttgtaactctttt 190  Q
    ||||||||||| | ||||||  |||| ||| ||||||||||||| ||||||  |||||| ||||||| ||||| | |||||  || |||||||| ||||     
T  24136027 tttagggttcacattgtgagagtggggaaacaccaaagggtagaatctaggacttgttcttgtgtaa-gcttgca-agctatttttcttgtaacccttt- 24135931  T
Q  191 gtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||| |||| | || || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  24135930 gtaacactttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactg 24135862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 36932350 - 36932425
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  36932350 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 36932425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 15464629 - 15464554
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||  ||||||||    
T  15464629 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgg 15464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 17003962 - 17004035
Alignment:
Q  178 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||||| || || |||| |||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  17003962 ttgtaactcttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattgg 17004035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 19588844 - 19588768
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||  |||||||  ||||||||    
T  19588844 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattgg 19588768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 12084175 - 12084246
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccata 246  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||| ||||| |||||| ||||    
T  12084175 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcata 12084246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 14520327 - 14520252
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| ||||||| |||||||||||| |||| |||||||| ||||||||    
T  14520327 ttcttgtaactcttt-gtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcatattgg 14520252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 28832356 - 28832281
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || |||||||||| ||||||||||||||||||||||| ||||||||    
T  28832356 ttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattgg 28832281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 4410241 - 4410283
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattgg 4410283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 42127410 - 42127483
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatatt 248  Q
    |||||||||||| || ||||||| |||| | || |||||||| | ||||||||||||||||||||||| ||||||    
T  42127410 ttcttgtaactcatt-gtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatatt 42127483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 30631691 - 30631641
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  30631691 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 30631641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 31180498 - 31180448
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  31180498 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 31180448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 19344676 - 19344435
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaa-caacattgtaatcaccttgggatttagggttcatagtgtgaggatg 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||    
T  19344676 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtg 19344577  T
Q  117 ggaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattgga 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19344576 ggaaaataccaaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattgga 19344477  T
Q  217 gagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  19344476 gagctgctctctcccctagattaggccacattggctgaactg 19344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 19349534 - 19349293
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaa-caacattgtaatcaccttgggatttagggttcatagtgtgaggatg 116  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||    
T  19349534 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtg 19349435  T
Q  117 ggaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattgga 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19349434 ggaaaataccaaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattgga 19349335  T
Q  217 gagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  19349334 gagctgctctctcccctagattaggccacattggctgaactg 19349293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 32247035 - 32246804
Alignment:
Q  22 tcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaa 121  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32247035 tcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaa--acattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaa 32246938  T
Q  122 ataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagc 220  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||| ||||||||||||||||||    
T  32246937 ataccaaagggtataatctagggtttgttcatgtgtaaagcttgaa-agctagagtcttgtaac-cttttgtaacactttctcatattggattggagagc 32246840  T
Q  221 tgctctctcccccagattaggccatattggctgaac 256  Q
    ||||||||||||||||||||||||||||||||||||    
T  32246839 tgctctctcccccagattaggccatattggctgaac 32246804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 39811843 - 39812059
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  39811843 ctttgttgagagtgtctcttaggttgagaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 39811940  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  39811941 ctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagat 39812038  T
Q  238 taggccatattggctgaactg 258  Q
    |||||||||||||||||||||    
T  39812039 taggccatattggctgaactg 39812059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 126 - 258
Target Start/End: Original strand, 44312563 - 44312695
Alignment:
Q  126 caaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgc 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  44312563 caaagggtagaatctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgc 44312660  T
Q  224 tctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||    
T  44312661 tctctcccccagattaggccatattggctgaactg 44312695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 11098844 - 11099010
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| |||||||||||||| ||||||| ||||| | |||||  | |||||||||| ||||    
T  11098844 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgca-agctattgtttcttgtaacccttt 11098941  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098942 -gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 11099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 14291668 - 14291502
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||  | ||||||| ||||||| |||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  14291668 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 14291571  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14291570 -gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 14291502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 3491847 - 3491764
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3491847 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 3491764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 9296401 - 9296484
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9296401 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactg 9296484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 13569426 - 13569350
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  13569426 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 13569350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 10445443 - 10445519
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcaca-tattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||| ||||||||    
T  10445443 ttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattgg 10445519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 25398592 - 25398509
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25398592 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactg 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 25403730 - 25403647
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25403730 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactg 25403647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 34388956 - 34388880
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  34388956 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattgg 34388880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 21630041 - 21629957
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 258  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  21630041 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactg 21629957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 8040149 - 8040073
Alignment:
Q  184 ctcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 258  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  8040149 ctcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactg 8040073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 34682333 - 34682409
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||||| | ||||||||    
T  34682333 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattgg 34682409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 17865301 - 17865227
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatatt 248  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| | ||||||||||||||||||||| ||||||    
T  17865301 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatatt 17865227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 8390149 - 8390225
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||| ||||    
T  8390149 ttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttgg 8390225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 10707251 - 10707327
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||| || ||||||||||| |||||| ||||||||    
T  10707251 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattgg 10707327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 14699007 - 14699082
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||| | |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  14699007 ttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 14699082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 20522318 - 20522242
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| |||||||||||| |||| |||| |||||||||| | ||||||||||||||||||||| ||||||||    
T  20522318 ttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattgg 20522242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 28259177 - 28259252
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  28259177 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgg 28259252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 31056139 - 31056067
Alignment:
Q  178 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    |||||||||||||||||||| |||| | || ||||||||||||||||||||||||| |||||||| |||||||    
T  31056139 ttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattg 31056067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 40738926 - 40738857
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||| |||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctc-cccccagattaggtcatattggctgaactg 40738857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 33118234 - 33118158
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||| ||||||||| | |||| |||| |||||||||| |||||||||||||||| |||||| ||||||||    
T  33118234 ttcttgtaactattttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattgg 33118158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 39483029 - 39482953
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||  |||| |||| ||||||||||  ||||||||||||||| |||||| ||||||||    
T  39483029 ttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattgg 39482953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 25407719 - 25407653
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattagg 241  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  25407719 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 16940208 - 16940284
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||| |||| ||| |||||||||||| | ||||||||    
T  16940208 ttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattgg 16940284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 17010873 - 17010949
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||| |||| ||| |||||||||||| | ||||||||    
T  17010873 ttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattgg 17010949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 33528620 - 33528696
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| | ||||||||  |||| |||||| ||||||||    
T  33528620 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattgg 33528696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 42039669 - 42039744
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||  ||||||| |||| |||| |||||| ||||||||||||||||| ||||||||| ||||||||    
T  42039669 ttcttgtaactcttc-gtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattgg 42039744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 2869692 - 2869768
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| |||||| ||| |||| | || |||||||||||||| |||||||||| ||| |||| ||||||||    
T  2869692 ttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattgg 2869768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 23078470 - 23078545
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||||||  |||||| |||| |||| |||||||||||| || ||||||||||| |||||| ||||||||    
T  23078470 ttcttgtaactctttc-taacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattgg 23078545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 27149327 - 27149369
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||||||| | |||| ||||||||    
T  27149327 tggattggagagctgctctctcccccatagtaggtcatattgg 27149369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 2838029 - 2838105
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcacat-attggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| |||||| ||| ||||  | | |||||||||||  |||||||||||||||| |||| ||||||||    
T  2838029 ttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattgg 2838105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 36757762 - 36757837
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||| ||||||||| | ||||| |||| |||| ||||||||||||||| | || ||||||||||||| ||||||||    
T  36757762 ttcttataactcttt-gaaacactttcatcatactggattggagagctgttatcccccccagattaggtcatattgg 36757837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 197; Significance: 1e-107; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 14140 - 14380
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  14140 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 14239  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| ||||||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14240 gaaattaccaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 14339  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  14340 agctgctctctcccccagattaggccacattggctgaactg 14380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 18992 - 19236
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  18992 agatgggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggaattatgggttcatagtgtgagg 19091  T
Q  114 atgggaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggatt 213  Q
     ||||||| ||||||||||||||||||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| |||    
T  19092 ttgggaaattaccaaagggtagatctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacactcacatattgtatt 19191  T
Q  214 ggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||||||| | |||||||||||    
T  19192 ggagagctgctctctcccccagattaggccacaatggctgaactg 19236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 24266033 - 24266273
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  24266033 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 24266132  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| ||||||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266133 gaaattaccaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 24266232  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  24266233 agctgctctctcccccagattaggccacattggctgaactg 24266273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 24261150 - 24261394
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  24261150 agatgggatcctttggggtgtgttcctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgagg 24261249  T
Q  114 atgggaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggatt 213  Q
     ||||||| ||||||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  24261250 ttgggaaattaccaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggatt 24261349  T
Q  214 ggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  24261350 ggagagctgctctctcccccagattaggccacattggctgaactg 24261394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 19992565 - 19992327
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||||||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||  |||    
T  19992565 gggatcctatggggtgtgttcctttgatgtgagtgtttcttaggttggggaaa-aacattgtaatcaccttgggattttgggttcatagtgtgagagtgg 19992467  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  19992466 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacactttcacatattggattggag 19992368  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19992367 agctgctctctcccccagattaggccatattggctgaactg 19992327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 16880331 - 16880087
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||  |||||||||||||||||    
T  16880331 agatgggatcctttggggtgtgttcctttgatgagagtgaatcttaggttggaaaaacaacattgtaatcatcttgggattatgggttcatagtgtgagg 16880232  T
Q  114 atgggaaa-ataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggat 212  Q
     |||||||  || |||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||    
T  16880231 ttgggaaatttatcaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactc-tttgtaaaacattcacatattggat 16880133  T
Q  213 tggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  16880132 tggagagctgctctctcccccagattaggccacattggctgaactg 16880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 16885186 - 16884943
Alignment:
Q  14 agatgggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgagg 113  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  16885186 agatgggatcctttggg-tgtgttcctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgagg 16885088  T
Q  114 atgggaaa-ataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggat 212  Q
     |||||||  || |||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||    
T  16885087 ttgggaaatttatcaaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactc-tttgtaaaacattcacatattggat 16884989  T
Q  213 tggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  16884988 tggagagctgctctctcccccagattaggccacattggctgaactg 16884943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 21812071 - 21812309
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||  |||    
T  21812071 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttggggaaa-aacattgtaatcaccttgggattatgggttcatagtgtgagagtgg 21812169  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagc-ttgaatagctagattcttgtaactcttttgtaacacattcacatattggattgga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||| ||| ||||||||| || ||||||||||||||||||    
T  21812170 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagctttgacaagctagagtcttggaac-cttttgtaagac-ttcacatattggattgga 21812267  T
Q  217 gagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||||||||||||||||||||||| |||||||||||||    
T  21812268 aagctgctctctcccccagattaggccacattggctgaactg 21812309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 31109438 - 31109654
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||| |    
T  31109438 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatatcaaagggtagaat 31109535  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    |||||||||||||||||| ||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  31109536 ctagggtttgttcatgtgcaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccctagat 31109633  T
Q  238 taggccatattggctgaactg 258  Q
    |||||||||||||||||||||    
T  31109634 taggccatattggctgaactg 31109654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 24024181 - 24024397
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||| ||||||  |||||||||||||| |||| |||||||||||| |||||||  |||||||||||||||||||||| |    
T  24024181 ctttgttgagagtgtctcttgggtttggaaaa--acattgtaatcaccgtgggttttagggttcatcgtgtgagagtgggaaaataccaaagggtagaat 24024278  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  24024279 ctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaaca-ttttgtaacactttctcatattggattggagagctgctctctcccccagat 24024376  T
Q  238 taggccatattggctgaactg 258  Q
    |||||||||||||||||||||    
T  24024377 taggccatattggctgaactg 24024397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 12406562 - 12406345
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||  ||||||||||||| ||||||  |||| ||| ||||||||||||| |    
T  12406562 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggcttttagggttcatattgtgagagtggggaaacaccaaagggtagaat 12406465  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||  |||||||||||||    
T  12406464 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctattctctcccccaga 12406367  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  12406366 ttaggccatattggctgaactg 12406345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 12397142 - 12396925
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |||||   |||| ||| ||||||||||||| |    
T  12397142 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattgtgatagtggggaaacaccaaagggtagaat 12397045  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    ||||||||||||||||||||||| || ||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  12397044 ctagggtttgttcatgtgtaaagattaaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgttctctcccccaga 12396947  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  12396946 ttaggccatattggctgaactg 12396925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 20357464 - 20357630
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||  | ||||||| |||||||  ||||| |||||||||||||||  ||||  | |||||||||| ||||    
T  20357464 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcatgttcttgtgtaaagcttgaag-gctattgtttcttgtaacccttt 20357562  T
Q  190 tgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20357563 -gtaacactttctcatattggattggagagctgctctctcccccaaattaggccatattggctgaactg 20357630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 4866816 - 4866744
Alignment:
Q  186 cttttgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4866816 cttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 4866744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 1533360 - 1533527
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgtt-catgtgtaaagcttgaatagcta--gattcttgtaactctt 188  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||| ||||||  ||||| | ||||||| ||||| | |||||  | |||||||||| |||    
T  1533360 tttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgca-agctattgtttcttgtaaccctt 1533457  T
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    | ||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1533458 t-gtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactg 1533527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 2058146 - 2057979
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaa-gggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactctt 188  Q
    ||||||||||||| ||||||  |||| ||| | || | ||||||| ||||||| |||||| ||||||| |||||||| ||||  | |||||||||| |||    
T  2058146 tttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaat-gctattgtttcttgtaaccctt 2058049  T
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058048 t-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 2057979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 18408860 - 18408777
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18408860 ttcttgtaacccttt-gtaacactttcatcatactggattggagagctgctctctcccccagattaggccatattggctgaactg 18408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 21639905 - 21639822
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21639905 ttcttgtaacccttt-gtaacactttcattatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 21639822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 29159901 - 29159825
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  29159901 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattgg 29159825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 21983383 - 21983306
Alignment:
Q  175 ttcttgtaactctttt-gtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  21983383 ttcttgtaactctttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 21983306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 2647695 - 2647771
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||| |||| ||||||||    
T  2647695 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgg 2647771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 18413736 - 18413654
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18413736 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggctgaactg 18413654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 21646103 - 21646020
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| ||||| |||||| |||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21646103 ttcttgtaaccctttt-taacactttcatcatagtggattggagagctgctctcttccctagattaggccatattggctgaactg 21646020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 46516309 - 46516385
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||| |||||||| ||||||||    
T  46516309 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattgg 46516385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 49091759 - 49091683
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||| |||||||| |||||||||||| ||||||||    
T  49091759 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattgg 49091683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 33332449 - 33332523
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatatt 248  Q
    ||||||||||||||||||||||| |||| | || |||||||||| ||||||||||||||||||||||| ||||||    
T  33332449 ttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatatt 33332523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 56045 - 55970
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| |||||||||||| ||||||||    
T  56045 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattgg 55970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 44848684 - 44848758
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||| ||||| |||||||    
T  44848684 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattg 44848758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 35960914 - 35960839
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||| |||||| |||||||||| |||| |||| ||| |||||| ||||||||||||||||||||||| |||||||    
T  35960914 ttcttctaactcatttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattg 35960839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 2580487 - 2580412
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||||||||||||| |||| ||||||||    
T  2580487 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattgg 2580412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 4796666 - 4796742
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||  |||| |||| |||||| ||| |||||| |||||||||||||||| ||| ||||    
T  4796666 ttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttgg 4796742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 9190008 - 9190083
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||||||||||||| |||| ||||||||    
T  9190008 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattgg 9190083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 20284153 - 20284111
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| ||||||||||||||||||||||| ||||||||    
T  20284153 tggattggagggctgctctctcccccagattaggtcatattgg 20284111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 28617258 - 28617300
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  28617258 tggattggagagctgctctctcccccagagtaggtcatattgg 28617300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 20357359 - 20357409
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    ||||| ||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  20357359 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttggg 20357409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 4873359 - 4873310
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgg 90  Q
    ||||| ||||||||| |||| ||||||||||  |||||||||||||||||||    
T  4873359 ctttgttgagagtgtctcttgggttgggaaa--aacattgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 5817269 - 5817344
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcacat-attggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| | |||||| ||| |||| || | ||||||||||||||||||||| ||||||| |||| ||||||||    
T  5817269 ttcttgtaacccctttgtatcactttcatattagtggattggagagctgctctct-ccccagagtaggtcatattgg 5817344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 43988293 - 43988535
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43988293 gggatcctttggggtgtgttcctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgg 43988392  T
Q  118 gaaaataccaaagggtagatctagggtttgt--tcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattgg 215  Q
    |||||| |||||||||||||||||||||| |  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43988393 gaaaatgccaaagggtagatctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattgg 43988492  T
Q  216 agagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  43988493 agagctgctctctcccccagattaggccacattggctgaactg 43988535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 25444923 - 25445160
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||    
T  25444923 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggatttagggttcatagtgtgagagtgg 25445020  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| ||| |||||||||||||||    
T  25445021 gaaaataccaaagggtagctctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacactttctcatattggattggag 25445119  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25445120 agctgctctctcccccagattaggccatattggctgaactg 25445160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 39445750 - 39445514
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||  |||    
T  39445750 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggattttgggttcatagtgtgagagtgg 39445653  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  39445652 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggag 39445555  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39445554 agctgctctctcccccagattaggccatattggctgaactg 39445514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 44023708 - 44023944
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||  |||    
T  44023708 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggattttgggttcatagtgtgagagtgg 44023805  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  44023806 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggag 44023903  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44023904 agctgctctctcccccagattaggccatattggctgaactg 44023944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 1054846 - 1055082
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||  |||    
T  1054846 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggattttgggttcatagtgtgagagtgg 1054943  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  1054944 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggag 1055041  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  1055042 agttgctctctcccccagattaggccatattggctgaactg 1055082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 39 - 254
Target Start/End: Complemental strand, 41390811 - 41390599
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  41390811 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 41390714  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  41390713 ctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagat 41390616  T
Q  238 taggccatattggctga 254  Q
    |||||||||||||||||    
T  41390615 taggccatattggctga 41390599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 39 - 254
Target Start/End: Complemental strand, 41398466 - 41398254
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  41398466 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 41398369  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  41398368 ctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagat 41398271  T
Q  238 taggccatattggctga 254  Q
    |||||||||||||||||    
T  41398270 taggccatattggctga 41398254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 25439730 - 25439875
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||    
T  25439730 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggatttagggttcatagtgtgagagtgg 25439827  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttga 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  25439828 gaaaataccaaagggtagctctagggtttgttcatgtgtaaagcttga 25439875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 93 - 258
Target Start/End: Original strand, 24787281 - 24787447
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  | || ||| ||||||||||||| |||||| ||||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  24787281 tttagggttcatattgtgagagttgggaaacaccaaagggtagaatctaggatttgttcttgtgtaatgcttgaag-gctattgtttcttgtaacccttt 24787379  T
Q  190 tgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24787380 -gtaacactttctcatattggattggagagctgctctcccccccagattaggccatattggctgaactg 24787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 24202769 - 24202852
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24202769 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 24202852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 16124515 - 16124591
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  16124515 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 16124591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 19073026 - 19072950
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||| ||||||||    
T  19073026 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattgg 19072950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 19120916 - 19120840
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||| ||||||||    
T  19120916 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattgg 19120840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 27104371 - 27104447
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||  |||||||    
T  27104371 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattgg 27104447  T

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Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 47703935 - 47704011
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  47703935 ttcttgtaattcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 47704011  T

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Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 26644897 - 26644972
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  26644897 ttcttgtaactcttt-gtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattgg 26644972  T

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Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 29651909 - 29651833
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  29651909 ttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattgg 29651833  T

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Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 3281805 - 3281730
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||  |||||||||||||||||||||||||||||||||| ||||||||    
T  3281805 ttcttgtaactcttt-gtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattgg 3281730  T

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Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 9476359 - 9476283
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||| |||||||||||||| || |||| |||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  9476359 ttcttataactcttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattgg 9476283  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 13598496 - 13598420
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||| |||||||||||||| |||| |||| ||||||| || ||||||||||||||||||||||| ||||||||    
T  13598496 ttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattgg 13598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 19358843 - 19358926
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19358843 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactg 19358926  T

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Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 19361432 - 19361515
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19361432 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactg 19361515  T

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Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 19380072 - 19380155
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  19380072 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactg 19380155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 13604623 - 13604697
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||| ||||||  |||| |||| ||||||||||||||||||||||||||| |||||| |||||||    
T  13604623 ttcttgtaactcttt-gtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 13604697  T

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Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 21536569 - 21536635
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattagg 241  Q
    ||||||||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||||||||||||    
T  21536569 ttcttgtaactcttt-gtaacactttcattatagtggattggagagctgctctctcccccagattagg 21536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 775759 - 775694
Alignment:
Q  186 cttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| |||| | || |||||||||||||| ||||||||||||||||||| ||||||||    
T  775759 cttttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattgg 775694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 37069864 - 37069792
Alignment:
Q  178 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| ||||||| |||| |||| ||||| |||||| ||||||||||||||||||||| ||||||||    
T  37069864 ttgtaactcttt-gtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattgg 37069792  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 32889536 - 32889461
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||| ||||||||| |||| ||||||||    
T  32889536 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattgg 32889461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 47098824 - 47098899
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||||| || ||||||| |||| | || |||||||||| |||||||||||||||||||| || ||||||||    
T  47098824 ttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattgg 47098899  T

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Target: scaffold0259 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 2082 - 2322
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  2082 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 2181  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| |||||||||||||||||| |||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2182 gaaattaccaaagggtagatctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 2281  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  2282 agctactctctcccccagattaggccacattggctgaactg 2322  T

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Target: scaffold0028 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 148787 - 149027
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  148787 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 148886  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||| |||||||||||||||||| |||||  || ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  148887 gaaattaccaaagggtagatctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggag 148986  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  148987 agctactctctcccccagattaggccacattggctgaactg 149027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 5e-96; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 3814274 - 3814038
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| ||||||||||  ||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||    
T  3814274 gggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgg 3814177  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  3814176 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaa-agctagagtcttgtaac-cttttgtaacactttcacatattggattggag 3814079  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3814078 agctgctctctcccccagattaggccatattggctgaactg 3814038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 5732915 - 5732679
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| |||||| ||||||||||  |||    
T  5732915 gggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaa--acattgtaatcaccttgggattaagggtttatagtgtgagagtgg 5732818  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||| |||||||||||||||    
T  5732817 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaa-agctagagtcttgtaac-cttttgtaacactttctcatattggattggag 5732720  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5732719 agctgctctctcccccagattaggccatattggctgaactg 5732679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 45357130 - 45357367
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||    
T  45357130 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttggggtttagggttcatagtgtgagagtgg 45357227  T
Q  118 gaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattgga 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||| ||||||||||||||    
T  45357228 gaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaa-agctagagtcttgtaac-cttttgtaacactttctcatattggattgga 45357325  T
Q  217 gagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  45357326 gagctgctctctcccccagattatgccatattggctgaactg 45357367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 18855977 - 18855741
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||| ||| |||||||| | ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||  ||||||||||||||||  |||    
T  18855977 gggagcctatggggtgtttgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggattgtgggttcatagtgtgagagtgg 18855880  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  18855879 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggag 18855782  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18855781 agctgctctctcccccagattaggccatattggctgaactg 18855741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 45347650 - 45347888
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||    
T  45347650 gggatcctatggggtgtgtgcctttgatgagagtgtctcttaggttgggaaaa--acattgtaatcaccttggggtttagggttcatagtgtgagagtgg 45347747  T
Q  118 gaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagctagat-tcttgtaactcttttgtaacacattcacatattggattgg 215  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||  ||||||||| |||||||||||| ||| |||||||||||||    
T  45347748 gaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaag-gctagaggtcttgtaac-cttttgtaacactttctcatattggattgg 45347845  T
Q  216 agagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  45347846 agagctgctctctcccccagattaagccatattggctgaactg 45347888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 9224261 - 9224478
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||| || |||  ||||||||||||||||||| ||||||||||||||||||||  |||| ||| ||||||||||||| |    
T  9224261 ctttgttgagagtgtctcttgggtttgggaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtggggaaacaccaaagggtagagt 9224358  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  9224359 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttctaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 9224456  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  9224457 ttaggccatattggctgaactg 9224478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 9229048 - 9229265
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||| || |||  ||||||||||||||||||| ||||||||||||||||||||  |||| ||| ||||||||||||| |    
T  9229048 ctttgttgagagtgtctcttgggtttgggaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtggggaaacaccaaagggtagagt 9229145  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  9229146 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttctaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 9229243  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  9229244 ttaggccatattggctgaactg 9229265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 39 - 258
Target Start/End: Complemental strand, 51520688 - 51520471
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||| |  |||  |||| ||| ||||||||||||| |    
T  51520688 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatattaagagagtggggaaacaccaaagggtagaat 51520591  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  51520590 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 51520493  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||| ||||||    
T  51520492 ttaggccatattggcagaactg 51520471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 258
Target Start/End: Original strand, 56146664 - 56146782
Alignment:
Q  139 tagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 237  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagat 56146761  T
Q  238 taggccatattggctgaactg 258  Q
    |||||||||||||||||||||    
T  56146762 taggccatattggctgaactg 56146782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 93 - 258
Target Start/End: Complemental strand, 24742120 - 24741954
Alignment:
Q  93 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||| |||||||||||||| ||||||| |||||||  ||||  | |||||||||| ||||    
T  24742120 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt 24742023  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742022 -gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 24741954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 258
Target Start/End: Complemental strand, 29760821 - 29760655
Alignment:
Q  94 ttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgtt-catgtgtaaagcttgaatagcta--gattcttgtaactcttt 189  Q
    |||||||||||||||||||  |||| ||| ||||||||||||| ||||||  ||||| | ||||||| ||||| |  ||||  | |||||||||| ||||    
T  29760821 ttagggttcatagtgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcag-gctattgtttcttgtaacccttt 29760724  T
Q  190 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
     ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29760723 -gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactg 29760655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 10047477 - 10047401
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  10047477 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 10047401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 39246092 - 39246016
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  39246092 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 39246016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 16623292 - 16623367
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |||||||||| |||||||    
T  16623292 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattg 16623367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 36315229 - 36315304
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  36315229 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 36315304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 36329438 - 36329513
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  36329438 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 36329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 38152438 - 38152514
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||||||    
T  38152438 ttcttataactcttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattgg 38152514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 24333901 - 24333831
Alignment:
Q  181 taactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  24333901 taactcttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgg 24333831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 28468542 - 28468612
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||| |||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggctgaactg 28468612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 3796518 - 3796594
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| |||||| ||||| |||||||||||||| |||||| ||||||||    
T  3796518 ttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattgg 3796594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 5143357 - 5143281
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| | ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  5143357 ttcttgtaaattttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattgg 5143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 16630679 - 16630755
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||| |||||||| | ||||||||    
T  16630679 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattgg 16630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 5147775 - 5147699
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||| ||||||||||| |||| |||| |||| ||||||||||||| |||||||| |||||| ||||||||    
T  5147775 ttcttgtaactattttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattgg 5147699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 5396671 - 5396746
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| | ||||| |||| |||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  5396671 ttcttgtaactcttt-gcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg 5396746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 5269204 - 5269266
Alignment:
Q  189 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 5269266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 6743417 - 6743490
Alignment:
Q  178 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||| |||||||||||||| |||| |||| |||||||||| |||||||||||||  |||||||| ||||||||    
T  6743417 ttgtagctcttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattgg 6743490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 31985634 - 31985708
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  31985634 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattgg 31985708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 3777646 - 3777571
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||| |||||||| | ||||||||  |||||||    
T  3777646 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattgg 3777571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 39774338 - 39774380
Alignment:
Q  208 tggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||    
T  39774338 tggattggagagctgctctatcccccagagtaggtcatattgg 39774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 29760919 - 29760875
Alignment:
Q  46 gagagtgtatcttaggttgggaaaacaacattgtaatcaccttggg 91  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||    
T  29760919 gagagtgtctcttgggttgggaaaa-aacattgtaatcaccttggg 29760875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 5112335 - 5112275
Alignment:
Q  175 ttcttgtaactcttttgtaacacattcacat-attggattggagagctgctctctccccca 234  Q
    |||||||||| | |||||||||| |||| || | |||||||||||||||||||| ||||||    
T  5112335 ttcttgtaacccatttgtaacactttcatattagtggattggagagctgctctcaccccca 5112275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 18712620 - 18712677
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagg 98  Q
    ||||| ||||||||| |||| ||||||||||  |||||||| ||||||||||| ||||||    
T  18712620 ctttgttgagagtgtctcttgggttgggaaa--aacattgttatcaccttgggttttagg 18712677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 613 - 377
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||| |||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||  |||    
T  613 gggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaa--acattgtaatcaccttgggattttgggttcatagtgtgagagtgg 516  T
Q  118 gaaaataccaaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggag 217  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  515 gaaaataccaaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggag 418  T
Q  218 agctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  417 agctgctctctcccccagattaggccatattggctgaactg 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 149; Significance: 9e-79; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 55 - 258
Target Start/End: Original strand, 9514 - 9713
Alignment:
Q  55 tcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtagatctagggtttgttcatgt 154  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  9514 tcttaggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagatctagggtttgttcatgt 9611  T
Q  155 gtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagattaggccatattggctga 254  Q
    ||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9612 gtaaagcttgaa-ggctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctga 9709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 39 - 184
Target Start/End: Original strand, 3703 - 3845
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtagatc 138  Q
    ||||| ||||||||| ||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  3703 ctttgttgagagtgtctcttaggttaggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagatc 3800  T
Q  139 tagggtttgttcatgtgtaaagcttgaatagctagattcttgtaac 184  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||    
T  3801 tagggtttgttcatgtgtaaagcttgaa-ggctagagtcttgtaac 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 258
Target Start/End: Original strand, 34916 - 35133
Alignment:
Q  39 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 137  Q
    ||||| ||||||||| |||| |||| || |||  ||||||||||||||||||| ||||||||||||||||||||  |||| ||| ||||||||||||| |    
T  34916 ctttgttgagagtgtctcttgggtttgggaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtggggaaacaccaaagggtagagt 35013  T
Q  138 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 236  Q
    |||||||||||||||||||||||||||||  |||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  35014 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttctaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 35111  T
Q  237 ttaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||    
T  35112 ttaggccatattggctgaactg 35133  T

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Target: scaffold0009 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 176808 - 176936
Alignment:
Q  18 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||    
T  176808 gggatcctttggggtgtgttcctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgg 176907  T
Q  118 gaaaataccaaagggtagatctagggttt 146  Q
    |||| ||||||||||||| ||||||||||    
T  176908 gaaattaccaaagggtaggtctagggttt 176936  T

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Target: scaffold0009; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 181973 - 182035
Alignment:
Q  196 acattcacatattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  181973 acattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactg 182035  T

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Target: scaffold0188 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 17952 - 18035
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17952 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 18035  T

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Target: scaffold0188; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 175 - 258
Target Start/End: Original strand, 24045 - 24128
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattggctgaactg 258  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24045 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactg 24128  T

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Target: scaffold0148 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 10827 - 10751
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||||||||||| |||| | || ||||||||||||||||||||||||||| |||||| ||||||||    
T  10827 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattgg 10751  T

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Target: scaffold0140 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 8419 - 8494
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  8419 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 8494  T

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Target: scaffold0006 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 5781 - 5705
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    |||||||| |||||||||||||| |||| |||| ||||||| || ||||||||||||||||||||||| ||||||||    
T  5781 ttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattgg 5705  T

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Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 2590 - 2514
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||| ||| ||||||||||||| |||| |||| |||||||||| |||||| |||||||||||||||| ||||||||    
T  2590 ttcttataattcttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattgg 2514  T

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Target: scaffold0006; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 133280 - 133354
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||| ||||||  |||| |||| ||||||||||||||||||||||||||| |||||| |||||||    
T  133280 ttcttgtaactcttt-gtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 133354  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 85780 - 85696
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactg 258  Q
    ||||||||||||||| ||||||| |||| |||  ||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  85780 ttcttgtaactcttt-gtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactg 85696  T

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Target: scaffold0087 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 43961 - 44036
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||||| |||  ||||||||    
T  43961 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattgg 44036  T

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Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 36832 - 36907
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattgg 250  Q
    ||||||||||||||| ||||||| |||| |||| ||| |||| |||||||||||| ||| |||||||| ||||||||    
T  36832 ttcttgtaactcttt-gtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattgg 36907  T

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Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 45322 - 45276
Alignment:
Q  203 catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||    
T  45322 catagtggattggagagctgctctctcccccagattaggtcatattg 45276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 17361 - 17286
Alignment:
Q  175 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccatattg 249  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| | ||||||||  |||| |||||| |||||||    
T  17361 ttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattg 17286  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 11533 - 11500
Alignment:
Q  208 tggattggagagctgctctctcccccagattagg 241  Q
    ||||||||||||||||||||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactagg 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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