View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8921_high_45 (Length: 240)
Name: NF8921_high_45
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8921_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 49009302 - 49009180
Alignment:
| Q |
22 |
ccctccaactgtattttttaaatttatactgtttgaacatgagactttgcctaagcaaccaaagtcgagttacatttaaaacaatgtaatgttggtgagt |
121 |
Q |
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| T |
49009302 |
ccctccaactgtattttttaaatttatactgtttgaacatgagactttgcctaagcaaccaaagtcgagttacatttaaaacaatgtaatgttggtgagt |
49009203 |
T |
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| Q |
122 |
ttttctatgatttggagattaac |
144 |
Q |
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| T |
49009202 |
ttttctatgatttggagattaac |
49009180 |
T |
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