View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8921_low_114 (Length: 253)
Name: NF8921_low_114
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8921_low_114 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 41854267 - 41854511
Alignment:
| Q |
1 |
ttttaacttcttggtgatcttggaaggtcccatcaaagtcctcgctcagaggactcccattggtagacactggggattccggtaacgaagttattactgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41854267 |
ttttaacttcttggtgatcttggaaggtcccatcaaagtcctcgctcagaggactcccattggtagacactggggattccggtaacgaagttattactgg |
41854366 |
T |
|
| Q |
101 |
agtcactggctgtgacttagaagttgattcattacatcttaaaatttgtaaagccttttcataggaagataatatcatctgcatctgtgaatctcttgtg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41854367 |
agtcactggctgtgacttagaagttgattcattacatcttaaaatttgtaaagccttttcataggaagataatatcatctgcatctgtgaatctcttgtg |
41854466 |
T |
|
| Q |
201 |
ccaagggaatatggtgtcctcaagtcttctttcagtctctctgct |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41854467 |
ccaagggaatatggtgtcctcaagtcttctttcagtctctttgct |
41854511 |
T |
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