View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8921_low_127 (Length: 240)
Name: NF8921_low_127
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8921_low_127 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 42634129 - 42633907
Alignment:
| Q |
1 |
tcagtatctcaaaaatagtaaggttaagttcaaagtaattgcaggtaattaattgaagcaatggttattaagccgtatcgctcagagccacactacaatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
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| T |
42634129 |
tcagtatctcaaaaatagtaaggttaagttcaaagtaattgcaggtaattaattgaagcaatggttattaagccatagcgctcagagccacactacaatc |
42634030 |
T |
|
| Q |
101 |
tgtaaacaacaaagcaaataaaagactgcagatattggtataacagaatcttgtacaagaaacatgttagggattaaattttcaactaggggttttagta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42634029 |
tgtaaacaacaaagcaaataaaagactgcagatattggtataacagaatcttgtacaagaaacatgttagggattaaattttcaactaggggttttagta |
42633930 |
T |
|
| Q |
201 |
caatatcagaatcagaatgatag |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
42633929 |
caatatcagaatcagaatgatag |
42633907 |
T |
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