View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8921_low_137 (Length: 221)

Name: NF8921_low_137
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8921_low_137
NF8921_low_137
[»] chr8 (38 HSPs)
chr8 (1-221)||(32603135-32603355)
chr8 (1-205)||(20015850-20016054)
chr8 (1-213)||(22031093-22031305)
chr8 (1-207)||(22126544-22126750)
chr8 (1-205)||(17671609-17671813)
chr8 (1-207)||(22117760-22117966)
chr8 (1-205)||(19115390-19115594)
chr8 (1-221)||(30310715-30310935)
chr8 (1-207)||(18859567-18859773)
chr8 (1-221)||(15536373-15536593)
chr8 (1-221)||(22042817-22043037)
chr8 (1-205)||(19481659-19481863)
chr8 (1-221)||(22129188-22129408)
chr8 (1-207)||(19980957-19981163)
chr8 (1-207)||(21164123-21164329)
chr8 (6-207)||(21253940-21254141)
chr8 (6-207)||(22421477-22421678)
chr8 (6-207)||(21391446-21391647)
chr8 (6-207)||(21780772-21780973)
chr8 (1-207)||(22990035-22990241)
chr8 (6-199)||(22245608-22245801)
chr8 (6-199)||(22246026-22246219)
chr8 (6-172)||(22523541-22523707)
chr8 (7-182)||(22375064-22375239)
chr8 (6-145)||(21786002-21786141)
chr8 (6-178)||(16268838-16269010)
chr8 (6-178)||(21928423-21928595)
chr8 (6-178)||(28983906-28984078)
chr8 (6-178)||(31414146-31414318)
chr8 (6-178)||(19985175-19985347)
chr8 (6-178)||(22373864-22374036)
chr8 (6-178)||(28989125-28989297)
chr8 (6-178)||(29301040-29301212)
chr8 (6-193)||(22053858-22054045)
chr8 (6-178)||(22027894-22028066)
chr8 (3-207)||(20391078-20391282)
chr8 (6-140)||(27357531-27357665)
chr8 (150-207)||(18881242-18881299)
[»] chr6 (41 HSPs)
chr6 (1-221)||(27559242-27559462)
chr6 (1-205)||(16574678-16574882)
chr6 (1-205)||(16620498-16620702)
chr6 (1-207)||(2872089-2872295)
chr6 (1-205)||(29589728-29589932)
chr6 (1-205)||(24293071-24293275)
chr6 (1-205)||(28260486-28260690)
chr6 (1-205)||(28285226-28285430)
chr6 (1-205)||(28339235-28339439)
chr6 (1-205)||(28312418-28312622)
chr6 (1-207)||(25115340-25115546)
chr6 (1-207)||(16924927-16925133)
chr6 (12-207)||(5836515-5836710)
chr6 (1-207)||(22436657-22436863)
chr6 (1-175)||(27190224-27190398)
chr6 (1-175)||(27258842-27259016)
chr6 (1-207)||(19867475-19867681)
chr6 (6-210)||(18405228-18405432)
chr6 (6-206)||(23081216-23081416)
chr6 (6-207)||(18182654-18182855)
chr6 (80-207)||(22829673-22829800)
chr6 (6-202)||(23085117-23085313)
chr6 (6-199)||(30678319-30678512)
chr6 (6-191)||(18797483-18797668)
chr6 (6-178)||(19437795-19437967)
chr6 (6-178)||(19455816-19455988)
chr6 (153-221)||(25756888-25756956)
chr6 (6-178)||(25770637-25770809)
chr6 (21-178)||(19465976-19466133)
chr6 (6-178)||(10466164-10466336)
chr6 (6-193)||(15462129-15462316)
chr6 (7-178)||(21474394-21474565)
chr6 (6-178)||(24367193-24367365)
chr6 (6-178)||(34642902-34643074)
chr6 (6-178)||(19486610-19486782)
chr6 (6-191)||(24515717-24515902)
chr6 (6-66)||(21567419-21567479)
chr6 (22-178)||(14377232-14377388)
chr6 (170-205)||(27205579-27205614)
chr6 (170-205)||(27243614-27243649)
chr6 (6-63)||(20010885-20010942)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-221)||(17113-17333)
scaffold0044 (1-207)||(3377-3583)
[»] chr7 (42 HSPs)
chr7 (1-205)||(8710518-8710722)
chr7 (1-205)||(14335309-14335513)
chr7 (1-205)||(18587324-18587528)
chr7 (1-205)||(44788504-44788708)
chr7 (1-207)||(13688954-13689160)
chr7 (1-221)||(9591277-9591497)
chr7 (1-213)||(17703600-17703812)
chr7 (1-207)||(11234364-11234570)
chr7 (1-207)||(15158208-15158414)
chr7 (1-205)||(18180656-18180860)
chr7 (1-207)||(11550253-11550459)
chr7 (1-207)||(12690415-12690620)
chr7 (1-186)||(14957467-14957652)
chr7 (1-207)||(15146074-15146280)
chr7 (55-213)||(16726586-16726744)
chr7 (1-114)||(8200961-8201074)
chr7 (6-207)||(14042613-14042814)
chr7 (6-207)||(14352643-14352844)
chr7 (128-215)||(11984032-11984119)
chr7 (6-193)||(18051096-18051283)
chr7 (6-178)||(21755331-21755503)
chr7 (6-178)||(26115748-26115920)
chr7 (6-178)||(40924975-40925147)
chr7 (8-152)||(15627444-15627588)
chr7 (6-178)||(16947630-16947802)
chr7 (6-178)||(26091956-26092128)
chr7 (6-178)||(49155220-49155392)
chr7 (1-60)||(10873603-10873662)
chr7 (6-191)||(13676370-13676555)
chr7 (21-178)||(13965826-13965983)
chr7 (6-178)||(13024264-13024435)
chr7 (6-178)||(15099761-15099933)
chr7 (6-178)||(19149930-19150102)
chr7 (6-178)||(20749329-20749501)
chr7 (6-199)||(12798638-12798831)
chr7 (6-178)||(12459547-12459719)
chr7 (6-178)||(14261404-14261576)
chr7 (6-178)||(11385587-11385759)
chr7 (6-178)||(14140598-14140770)
chr7 (6-178)||(14283532-14283704)
chr7 (6-178)||(15343350-15343522)
chr7 (6-193)||(12203943-12204130)
[»] chr5 (43 HSPs)
chr5 (1-205)||(41773698-41773902)
chr5 (1-205)||(16359358-16359562)
chr5 (1-221)||(18781970-18782190)
chr5 (1-205)||(27521262-27521466)
chr5 (1-205)||(27613212-27613416)
chr5 (1-205)||(34569350-34569554)
chr5 (1-207)||(22330211-22330417)
chr5 (1-207)||(27682724-27682930)
chr5 (1-207)||(29473397-29473603)
chr5 (1-205)||(19772816-19773020)
chr5 (1-205)||(40711636-40711840)
chr5 (1-207)||(37288820-37289026)
chr5 (1-205)||(27665816-27666020)
chr5 (1-207)||(22137524-22137730)
chr5 (1-207)||(14997063-14997269)
chr5 (1-213)||(21882630-21882842)
chr5 (1-207)||(22350775-22350981)
chr5 (1-207)||(23460827-23461033)
chr5 (1-163)||(20803453-20803615)
chr5 (6-207)||(25429282-25429483)
chr5 (1-207)||(26736051-26736257)
chr5 (1-121)||(21342824-21342944)
chr5 (46-207)||(23525952-23526113)
chr5 (6-207)||(21631723-21631924)
chr5 (6-202)||(23474056-23474252)
chr5 (86-207)||(21332310-21332431)
chr5 (1-207)||(21409990-21410196)
chr5 (6-178)||(14884344-14884516)
chr5 (6-178)||(23078258-23078430)
chr5 (3-178)||(21983530-21983705)
chr5 (21-178)||(20345140-20345297)
chr5 (6-193)||(20824296-20824483)
chr5 (6-178)||(22505522-22505694)
chr5 (6-193)||(28892280-28892467)
chr5 (6-193)||(20778756-20778943)
chr5 (6-193)||(25850915-25851102)
chr5 (7-82)||(21336743-21336818)
chr5 (3-178)||(21561378-21561553)
chr5 (6-193)||(17266672-17266859)
chr5 (6-178)||(22464793-22464965)
chr5 (6-178)||(23563521-23563693)
chr5 (1-49)||(20311706-20311754)
chr5 (135-176)||(20803613-20803654)
[»] chr4 (39 HSPs)
chr4 (1-205)||(12479524-12479728)
chr4 (1-207)||(8050505-8050711)
chr4 (1-207)||(14300861-14301067)
chr4 (1-205)||(8389336-8389540)
chr4 (1-205)||(16233876-16234080)
chr4 (1-205)||(23958671-23958875)
chr4 (1-205)||(27714260-27714464)
chr4 (1-207)||(19635060-19635266)
chr4 (1-205)||(17092033-17092237)
chr4 (1-221)||(18224314-18224534)
chr4 (5-205)||(19775677-19775877)
chr4 (1-207)||(40475964-40476170)
chr4 (12-221)||(13513285-13513494)
chr4 (1-213)||(16350430-16350642)
chr4 (1-207)||(14683491-14683697)
chr4 (1-221)||(16250718-16250938)
chr4 (1-207)||(15144774-15144980)
chr4 (6-207)||(15917-16118)
chr4 (6-207)||(14162399-14162600)
chr4 (6-199)||(14697030-14697223)
chr4 (111-221)||(18604687-18604797)
chr4 (73-207)||(16219184-16219318)
chr4 (73-207)||(16222504-16222638)
chr4 (6-193)||(51603948-51604135)
chr4 (6-193)||(53750626-53750813)
chr4 (6-178)||(15073288-15073460)
chr4 (6-178)||(3261965-3262137)
chr4 (6-178)||(29450708-29450880)
chr4 (1-82)||(14188430-14188511)
chr4 (6-191)||(16154711-16154896)
chr4 (6-178)||(20892960-20893132)
chr4 (6-178)||(44659037-44659209)
chr4 (6-191)||(16150565-16150750)
chr4 (6-178)||(11204403-11204575)
chr4 (6-193)||(27903314-27903501)
chr4 (101-178)||(7357291-7357368)
chr4 (6-199)||(14993517-14993710)
chr4 (6-67)||(15354322-15354383)
chr4 (37-178)||(15266736-15266877)
[»] chr3 (60 HSPs)
chr3 (1-205)||(10008143-10008347)
chr3 (1-205)||(10908753-10908957)
chr3 (1-205)||(12889252-12889456)
chr3 (1-205)||(13255233-13255437)
chr3 (1-207)||(15713437-15713643)
chr3 (1-205)||(15345628-15345832)
chr3 (1-205)||(15586775-15586979)
chr3 (1-205)||(43165218-43165422)
chr3 (1-205)||(48427990-48428194)
chr3 (1-221)||(16804314-16804534)
chr3 (1-205)||(3688486-3688690)
chr3 (1-205)||(16754084-16754288)
chr3 (1-205)||(20059437-20059641)
chr3 (1-205)||(53382401-53382605)
chr3 (1-207)||(15358626-15358832)
chr3 (1-207)||(26790794-26791000)
chr3 (1-205)||(16638316-16638520)
chr3 (1-217)||(16694707-16694923)
chr3 (1-201)||(15399904-15400104)
chr3 (1-202)||(6603278-6603479)
chr3 (1-205)||(5422313-5422517)
chr3 (1-207)||(24185733-24185939)
chr3 (1-207)||(14873949-14874155)
chr3 (3-207)||(15065616-15065820)
chr3 (6-207)||(15262178-15262379)
chr3 (6-207)||(12843484-12843685)
chr3 (8-207)||(14578789-14578988)
chr3 (80-207)||(23079398-23079525)
chr3 (116-207)||(11861032-11861123)
chr3 (1-207)||(15013139-15013345)
chr3 (6-193)||(8744774-8744961)
chr3 (6-193)||(13944582-13944769)
chr3 (6-178)||(47126502-47126674)
chr3 (6-191)||(31692571-31692756)
chr3 (6-178)||(10408526-10408698)
chr3 (3-178)||(17188929-17189104)
chr3 (6-82)||(17492399-17492475)
chr3 (3-178)||(24189859-24190034)
chr3 (6-178)||(28756877-28757049)
chr3 (6-193)||(10417429-10417616)
chr3 (10-178)||(11949324-11949492)
chr3 (6-178)||(12180902-12181074)
chr3 (26-178)||(12509882-12510034)
chr3 (6-178)||(14290931-14291103)
chr3 (6-193)||(16831912-16832099)
chr3 (6-175)||(16327111-16327280)
chr3 (6-178)||(11958580-11958752)
chr3 (6-191)||(12357913-12358098)
chr3 (25-193)||(13317918-13318086)
chr3 (6-178)||(17494204-17494377)
chr3 (6-191)||(31941461-31941646)
chr3 (6-178)||(12857894-12858066)
chr3 (6-178)||(16825678-16825852)
chr3 (6-191)||(18131733-18131917)
chr3 (6-193)||(16378318-16378505)
chr3 (6-157)||(12272896-12273047)
chr3 (6-67)||(14575544-14575605)
chr3 (6-178)||(15230161-15230333)
chr3 (6-178)||(15236029-15236201)
chr3 (131-207)||(19727433-19727509)
[»] chr2 (41 HSPs)
chr2 (1-205)||(22323026-22323230)
chr2 (1-205)||(24712589-24712793)
chr2 (1-205)||(9338137-9338341)
chr2 (1-205)||(9486771-9486975)
chr2 (1-205)||(10871405-10871609)
chr2 (1-205)||(16983795-16983999)
chr2 (1-205)||(17001555-17001759)
chr2 (1-221)||(24657326-24657546)
chr2 (1-205)||(27373824-27374028)
chr2 (1-205)||(44383254-44383458)
chr2 (1-207)||(24264925-24265131)
chr2 (1-207)||(24705164-24705370)
chr2 (1-221)||(11351379-11351599)
chr2 (1-207)||(24874432-24874638)
chr2 (1-221)||(23204869-23205089)
chr2 (1-194)||(45673707-45673900)
chr2 (1-184)||(27220571-27220754)
chr2 (1-207)||(22742648-22742854)
chr2 (1-195)||(23029155-23029349)
chr2 (1-207)||(21322948-21323154)
chr2 (1-207)||(24678042-24678248)
chr2 (1-169)||(21142761-21142929)
chr2 (6-207)||(23064973-23065174)
chr2 (6-207)||(23074423-23074624)
chr2 (6-201)||(22733462-22733657)
chr2 (6-207)||(23105410-23105611)
chr2 (6-207)||(24817522-24817723)
chr2 (111-221)||(23676583-23676693)
chr2 (13-207)||(30208602-30208796)
chr2 (1-125)||(41606156-41606274)
chr2 (6-178)||(20848149-20848321)
chr2 (1-207)||(19817402-19817608)
chr2 (6-178)||(12576913-12577085)
chr2 (6-191)||(23274153-23274338)
chr2 (6-178)||(19716728-19716900)
chr2 (3-178)||(23113280-23113455)
chr2 (6-159)||(23097748-23097901)
chr2 (166-221)||(22463149-22463204)
chr2 (168-211)||(19647611-19647654)
chr2 (108-178)||(19721291-19721361)
chr2 (165-207)||(21139663-21139705)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-221)||(13255-13475)
scaffold0109 (1-207)||(41108-41314)
[»] scaffold0055 (1 HSPs)
scaffold0055 (1-205)||(22200-22404)
[»] scaffold0052 (1 HSPs)
scaffold0052 (1-205)||(7189-7393)
[»] chr1 (35 HSPs)
chr1 (1-205)||(16347811-16348015)
chr1 (1-205)||(51330708-51330912)
chr1 (3-205)||(21833243-21833445)
chr1 (1-207)||(17042229-17042435)
chr1 (1-207)||(21842151-21842357)
chr1 (1-205)||(33388245-33388449)
chr1 (1-205)||(41350884-41351088)
chr1 (1-207)||(22496470-22496676)
chr1 (1-207)||(24785071-24785277)
chr1 (1-210)||(20081587-20081796)
chr1 (1-207)||(19109307-19109513)
chr1 (30-213)||(21228764-21228947)
chr1 (6-210)||(21751991-21752195)
chr1 (6-199)||(16379038-16379231)
chr1 (91-207)||(22401621-22401737)
chr1 (127-221)||(22435933-22436027)
chr1 (6-178)||(20074952-20075124)
chr1 (6-178)||(20297356-20297528)
chr1 (10-178)||(21739279-21739447)
chr1 (6-178)||(31537240-31537412)
chr1 (6-178)||(52988716-52988888)
chr1 (6-178)||(48425848-48426020)
chr1 (6-178)||(24096858-24097030)
chr1 (6-178)||(37680024-37680196)
chr1 (6-178)||(38910069-38910241)
chr1 (6-199)||(21742774-21742967)
chr1 (6-199)||(22015967-22016160)
chr1 (6-175)||(19857249-19857418)
chr1 (6-178)||(20854003-20854175)
chr1 (139-207)||(22400397-22400465)
chr1 (165-216)||(21176531-21176582)
chr1 (6-191)||(18710360-18710545)
chr1 (117-199)||(21045346-21045428)
chr1 (6-191)||(20833130-20833315)
chr1 (6-67)||(12200493-12200554)
[»] scaffold2059 (1 HSPs)
scaffold2059 (1-221)||(900-1120)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-221)||(29059-29279)
[»] scaffold0080 (5 HSPs)
scaffold0080 (1-221)||(10369-10589)
scaffold0080 (1-221)||(13024-13244)
scaffold0080 (1-207)||(31836-32038)
scaffold0080 (5-207)||(37306-37504)
scaffold0080 (6-202)||(54595-54791)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-221)||(17197-17417)
scaffold0017 (1-206)||(194984-195189)
scaffold0017 (1-207)||(24259-24465)
[»] scaffold0010 (4 HSPs)
scaffold0010 (1-221)||(14377-14597)
scaffold0010 (6-207)||(4873-5074)
scaffold0010 (6-191)||(39494-39679)
scaffold0010 (6-67)||(44712-44773)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-207)||(10321-10527)
[»] scaffold1881 (1 HSPs)
scaffold1881 (1-221)||(611-831)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-221)||(94-314)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-213)||(36451-36663)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-210)||(36962-37171)
scaffold0042 (6-207)||(26310-26511)
[»] scaffold0177 (2 HSPs)
scaffold0177 (1-221)||(11487-11707)
scaffold0177 (177-221)||(15172-15216)
[»] scaffold0130 (2 HSPs)
scaffold0130 (5-221)||(7910-8126)
scaffold0130 (10-141)||(4100-4231)
[»] scaffold0003 (2 HSPs)
scaffold0003 (6-207)||(424266-424467)
scaffold0003 (6-175)||(203339-203508)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-207)||(8211-8417)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-207)||(30719-30925)
scaffold0023 (6-207)||(47128-47328)
scaffold0023 (6-120)||(152039-152154)
scaffold0023 (6-178)||(164575-164747)
[»] scaffold0550 (1 HSPs)
scaffold0550 (1-213)||(10297-10509)
[»] scaffold0081 (2 HSPs)
scaffold0081 (1-207)||(21557-21763)
scaffold0081 (1-207)||(36981-37187)
[»] scaffold0028 (4 HSPs)
scaffold0028 (1-207)||(11422-11628)
scaffold0028 (1-176)||(17890-18065)
scaffold0028 (40-205)||(54996-55161)
scaffold0028 (1-44)||(53680-53723)
[»] scaffold1459 (1 HSPs)
scaffold1459 (1-221)||(1163-1383)
[»] scaffold0333 (1 HSPs)
scaffold0333 (3-207)||(18605-18809)
[»] scaffold0305 (1 HSPs)
scaffold0305 (45-221)||(2861-3037)
[»] scaffold0273 (1 HSPs)
scaffold0273 (9-207)||(1-199)
[»] scaffold0993 (1 HSPs)
scaffold0993 (1-207)||(935-1141)
[»] scaffold0102 (2 HSPs)
scaffold0102 (5-207)||(50490-50692)
scaffold0102 (6-178)||(42656-42828)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-207)||(34860-35066)
scaffold0022 (3-206)||(41587-41790)
scaffold0022 (3-206)||(75307-75510)
[»] scaffold0412 (1 HSPs)
scaffold0412 (37-213)||(15718-15894)
[»] scaffold0476 (2 HSPs)
scaffold0476 (1-207)||(10739-10945)
scaffold0476 (9-178)||(719-888)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-221)||(14037-14257)
scaffold0120 (91-201)||(11307-11417)
[»] scaffold0423 (1 HSPs)
scaffold0423 (6-221)||(2394-2609)
[»] scaffold0007 (2 HSPs)
scaffold0007 (34-205)||(48651-48822)
scaffold0007 (1-49)||(83824-83872)
[»] scaffold0411 (1 HSPs)
scaffold0411 (6-207)||(8368-8569)
[»] scaffold0011 (2 HSPs)
scaffold0011 (6-207)||(23678-23879)
scaffold0011 (6-159)||(151525-151678)
[»] scaffold0621 (2 HSPs)
scaffold0621 (6-207)||(4392-4593)
scaffold0621 (32-207)||(1-176)
[»] scaffold0403 (1 HSPs)
scaffold0403 (10-207)||(14873-15070)
[»] scaffold1423 (1 HSPs)
scaffold1423 (9-207)||(523-721)
[»] scaffold0084 (1 HSPs)
scaffold0084 (6-207)||(8181-8382)
[»] scaffold0075 (1 HSPs)
scaffold0075 (6-207)||(55615-55816)
[»] scaffold0324 (1 HSPs)
scaffold0324 (6-210)||(1947-2151)
[»] scaffold0540 (1 HSPs)
scaffold0540 (6-207)||(11025-11226)
[»] scaffold0122 (1 HSPs)
scaffold0122 (6-207)||(40652-40853)
[»] scaffold0001 (3 HSPs)
scaffold0001 (6-207)||(495978-496179)
scaffold0001 (6-199)||(441611-441804)
scaffold0001 (6-178)||(514527-514699)
[»] scaffold0331 (1 HSPs)
scaffold0331 (8-207)||(15124-15323)
[»] scaffold0040 (2 HSPs)
scaffold0040 (6-205)||(111054-111253)
scaffold0040 (6-182)||(17836-18012)
[»] scaffold0282 (1 HSPs)
scaffold0282 (6-199)||(13632-13825)
[»] scaffold0270 (2 HSPs)
scaffold0270 (6-207)||(6831-7032)
scaffold0270 (6-207)||(13961-14162)
[»] scaffold0243 (2 HSPs)
scaffold0243 (6-207)||(24090-24291)
scaffold0243 (6-191)||(9933-10118)
[»] scaffold0077 (1 HSPs)
scaffold0077 (6-207)||(57759-57960)
[»] scaffold0342 (1 HSPs)
scaffold0342 (6-207)||(14411-14612)
[»] scaffold0278 (1 HSPs)
scaffold0278 (18-207)||(3521-3710)
[»] scaffold0218 (1 HSPs)
scaffold0218 (6-207)||(24857-25058)
[»] scaffold0114 (2 HSPs)
scaffold0114 (6-207)||(17494-17695)
scaffold0114 (6-193)||(40016-40203)
[»] scaffold0018 (2 HSPs)
scaffold0018 (6-195)||(23455-23644)
scaffold0018 (6-207)||(9496-9697)
[»] scaffold0006 (1 HSPs)
scaffold0006 (6-207)||(104185-104386)
[»] scaffold0207 (1 HSPs)
scaffold0207 (6-207)||(7884-8085)
[»] scaffold0074 (2 HSPs)
scaffold0074 (3-199)||(6068-6264)
scaffold0074 (6-193)||(15081-15268)
[»] scaffold0358 (1 HSPs)
scaffold0358 (6-207)||(8908-9106)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-207)||(216565-216766)
[»] scaffold0575 (1 HSPs)
scaffold0575 (9-145)||(4544-4680)
[»] scaffold0035 (2 HSPs)
scaffold0035 (8-207)||(41253-41452)
scaffold0035 (6-178)||(5763-5935)
[»] scaffold0009 (2 HSPs)
scaffold0009 (111-221)||(229983-230093)
scaffold0009 (6-178)||(251580-251752)
[»] scaffold0293 (1 HSPs)
scaffold0293 (6-199)||(15380-15561)
[»] scaffold0019 (1 HSPs)
scaffold0019 (111-221)||(171181-171291)
[»] scaffold0529 (1 HSPs)
scaffold0529 (6-207)||(5046-5247)
[»] scaffold0148 (1 HSPs)
scaffold0148 (8-203)||(1959-2154)
[»] scaffold0165 (1 HSPs)
scaffold0165 (6-178)||(11918-12090)
[»] scaffold0789 (1 HSPs)
scaffold0789 (111-207)||(1-97)
[»] scaffold0041 (1 HSPs)
scaffold0041 (6-178)||(41693-41865)
[»] scaffold0029 (2 HSPs)
scaffold0029 (6-193)||(94053-94240)
scaffold0029 (6-178)||(115520-115692)
[»] scaffold0501 (2 HSPs)
scaffold0501 (1-63)||(12616-12678)
scaffold0501 (127-207)||(3-83)
[»] scaffold0192 (1 HSPs)
scaffold0192 (9-178)||(29488-29657)
[»] scaffold0104 (2 HSPs)
scaffold0104 (6-199)||(43572-43765)
scaffold0104 (8-48)||(25176-25216)
[»] scaffold0067 (4 HSPs)
scaffold0067 (6-207)||(29582-29783)
scaffold0067 (6-193)||(64761-64948)
scaffold0067 (6-193)||(49339-49526)
scaffold0067 (6-193)||(58373-58560)
[»] scaffold1288 (1 HSPs)
scaffold1288 (6-178)||(29-201)
[»] scaffold0309 (1 HSPs)
scaffold0309 (6-178)||(12685-12857)
[»] scaffold0118 (1 HSPs)
scaffold0118 (6-178)||(419-591)
[»] scaffold1056 (1 HSPs)
scaffold1056 (8-178)||(1681-1851)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-207)||(4449-4655)
[»] scaffold0865 (1 HSPs)
scaffold0865 (6-178)||(1446-1618)
[»] scaffold0405 (1 HSPs)
scaffold0405 (6-199)||(5560-5753)
[»] scaffold0285 (1 HSPs)
scaffold0285 (148-221)||(5098-5171)
[»] scaffold0203 (1 HSPs)
scaffold0203 (6-191)||(1015-1200)
[»] scaffold0133 (1 HSPs)
scaffold0133 (6-178)||(28459-28631)
[»] scaffold0088 (1 HSPs)
scaffold0088 (21-178)||(29907-30064)
[»] scaffold0068 (1 HSPs)
scaffold0068 (6-178)||(67282-67454)
[»] scaffold0046 (2 HSPs)
scaffold0046 (6-159)||(60697-60850)
scaffold0046 (21-178)||(70081-70238)
[»] scaffold0004 (2 HSPs)
scaffold0004 (6-191)||(325665-325850)
scaffold0004 (3-178)||(200642-200817)
[»] scaffold1530 (1 HSPs)
scaffold1530 (6-178)||(541-713)
[»] scaffold1433 (1 HSPs)
scaffold1433 (6-178)||(1485-1657)
[»] scaffold1032 (1 HSPs)
scaffold1032 (6-178)||(989-1161)
[»] scaffold0765 (1 HSPs)
scaffold0765 (6-193)||(6416-6603)
[»] scaffold0708 (1 HSPs)
scaffold0708 (6-178)||(5319-5491)
[»] scaffold0443 (1 HSPs)
scaffold0443 (6-178)||(11767-11939)
[»] scaffold0404 (1 HSPs)
scaffold0404 (6-178)||(7702-7874)
[»] scaffold0348 (2 HSPs)
scaffold0348 (6-193)||(17643-17830)
scaffold0348 (6-193)||(5008-5195)
[»] scaffold0020 (2 HSPs)
scaffold0020 (6-178)||(175946-176117)
scaffold0020 (6-178)||(98757-98929)
[»] scaffold0585 (1 HSPs)
scaffold0585 (8-178)||(4263-4433)
[»] scaffold0100 (2 HSPs)
scaffold0100 (6-124)||(21413-21531)
scaffold0100 (121-199)||(16762-16840)
[»] scaffold0751 (1 HSPs)
scaffold0751 (6-199)||(5139-5332)
[»] scaffold0664 (1 HSPs)
scaffold0664 (6-191)||(6996-7181)
[»] scaffold0420 (1 HSPs)
scaffold0420 (6-191)||(8572-8757)
[»] scaffold0108 (1 HSPs)
scaffold0108 (6-175)||(50063-50232)
[»] scaffold0054 (1 HSPs)
scaffold0054 (6-199)||(63672-63865)
[»] scaffold0222 (3 HSPs)
scaffold0222 (6-178)||(20772-20944)
scaffold0222 (6-67)||(772-833)
scaffold0222 (101-178)||(661-738)
[»] scaffold0167 (1 HSPs)
scaffold0167 (6-178)||(1078-1250)
[»] scaffold0034 (2 HSPs)
scaffold0034 (6-178)||(2126-2298)
scaffold0034 (6-193)||(70330-70517)
[»] scaffold0198 (1 HSPs)
scaffold0198 (132-207)||(30371-30446)
[»] scaffold0064 (1 HSPs)
scaffold0064 (139-213)||(69560-69634)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-175)||(263184-263353)
[»] scaffold0706 (1 HSPs)
scaffold0706 (6-191)||(5370-5555)
[»] scaffold0523 (1 HSPs)
scaffold0523 (6-175)||(2829-2998)
[»] scaffold0298 (1 HSPs)
scaffold0298 (6-191)||(9388-9573)
[»] scaffold0239 (1 HSPs)
scaffold0239 (6-178)||(9960-10132)
[»] scaffold0235 (2 HSPs)
scaffold0235 (6-191)||(8623-8808)
scaffold0235 (6-191)||(18837-19022)
[»] scaffold0072 (1 HSPs)
scaffold0072 (6-191)||(54005-54190)
[»] scaffold0053 (1 HSPs)
scaffold0053 (6-178)||(65472-65644)
[»] scaffold0156 (1 HSPs)
scaffold0156 (6-178)||(36897-37069)
[»] scaffold0507 (1 HSPs)
scaffold0507 (92-199)||(11072-11179)
[»] scaffold0413 (2 HSPs)
scaffold0413 (6-69)||(3559-3622)
scaffold0413 (150-203)||(3644-3697)
[»] scaffold0056 (1 HSPs)
scaffold0056 (6-178)||(1057-1229)
[»] scaffold0031 (1 HSPs)
scaffold0031 (6-159)||(110568-110721)
[»] scaffold0451 (1 HSPs)
scaffold0451 (165-213)||(14171-14219)
[»] scaffold0190 (1 HSPs)
scaffold0190 (6-178)||(30500-30672)
[»] scaffold0546 (1 HSPs)
scaffold0546 (170-221)||(1-52)
[»] scaffold0261 (2 HSPs)
scaffold0261 (6-137)||(20743-20874)
scaffold0261 (6-63)||(12637-12694)
[»] scaffold0117 (1 HSPs)
scaffold0117 (6-67)||(3455-3516)
[»] scaffold0090 (1 HSPs)
scaffold0090 (6-67)||(21809-21870)
[»] scaffold0076 (2 HSPs)
scaffold0076 (6-67)||(53708-53769)
scaffold0076 (108-178)||(53597-53667)
[»] scaffold1373 (1 HSPs)
scaffold1373 (6-178)||(8-180)
[»] scaffold0509 (1 HSPs)
scaffold0509 (6-159)||(11788-11939)
[»] scaffold0310 (1 HSPs)
scaffold0310 (6-178)||(10935-11107)
[»] scaffold0206 (1 HSPs)
scaffold0206 (6-67)||(26070-26131)
[»] scaffold0490 (1 HSPs)
scaffold0490 (158-210)||(1-53)
[»] scaffold0058 (1 HSPs)
scaffold0058 (6-178)||(22080-22252)
[»] scaffold1299 (1 HSPs)
scaffold1299 (99-178)||(2022-2101)
[»] scaffold0049 (1 HSPs)
scaffold0049 (6-141)||(49088-49223)
[»] scaffold0367 (1 HSPs)
scaffold0367 (101-191)||(9182-9272)
[»] scaffold0106 (1 HSPs)
scaffold0106 (101-175)||(34390-34464)


Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 32603135 - 32603355
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32603135 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 32603234  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  32603235 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcagtctctgtc 32603334  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  32603335 tgagtaccagccagagcaaaa 32603355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20016054 - 20015850
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20016054 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 20015955  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20015954 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 20015855  T
Q  201 tgagt 205  Q
    |||||    
T  20015854 tgagt 20015850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 22031093 - 22031305
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22031093 atacgagagaagtagtcaccgaacccttagttggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 22031192  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22031193 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 22031292  T
Q  201 tgagtactagcca 213  Q
    ||||||| |||||    
T  22031293 tgagtaccagcca 22031305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22126750 - 22126544
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22126750 atacgagagaagtaatcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 22126651  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22126650 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 22126551  T
Q  201 tgagtac 207  Q
    |||||||    
T  22126550 tgagtac 22126544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 17671813 - 17671609
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17671813 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 17671714  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17671713 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 17671614  T
Q  201 tgagt 205  Q
    |||||    
T  17671613 tgagt 17671609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22117966 - 22117760
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22117966 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacgatcgaa 22117867  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  22117866 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaatgatcctcattctctgtc 22117767  T
Q  201 tgagtac 207  Q
    |||||||    
T  22117766 tgagtac 22117760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19115390 - 19115594
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19115390 atacgagagaagtagtcactgaacccttagctggagttttgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 19115489  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19115490 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 19115589  T
Q  201 tgagt 205  Q
    |||||    
T  19115590 tgagt 19115594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30310935 - 30310715
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30310935 atacgagagaagtagtcaccgaacccttagctggagtctcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 30310836  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30310835 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 30310736  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| ||| |||| ||||    
T  30310735 tgagtaccagctagagcaaaa 30310715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 18859567 - 18859773
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18859567 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 18859666  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  18859667 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctctgtc 18859766  T
Q  201 tgagtac 207  Q
    |||||||    
T  18859767 tgagtac 18859773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15536373 - 15536593
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  15536373 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaggcagaaacataatcgaa 15536472  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  15536473 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaacggagtatcattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 15536572  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| ||| |||| ||||    
T  15536573 tgagtaccagcaagagcaaaa 15536593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22042817 - 22043037
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||    
T  22042817 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccaatcatatcagaaaaatcaagacccaaagcagaaacacaatcaaa 22042916  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    || |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22042917 agaaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 22043016  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||  |||||||| ||||    
T  22043017 tgagtagcagccagagcaaaa 22043037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 19481863 - 19481659
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  19481863 atacgagagaagtaagcaccgaacccttagctggagtttcgacaaccatctctccgttcatatcagacaactcaagacccaaagcagaaacacaatcgaa 19481764  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19481763 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 19481664  T
Q  201 tgagt 205  Q
    |||||    
T  19481663 tgagt 19481659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 22129408 - 22129188
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22129408 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctgtccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 22129309  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  22129308 agcaataaagcaatgtgtaacaccagtatcaataatagcaactaaagcagtattattaatctagcaagtacctctgatcaaacgatcctcattctttgtc 22129209  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  22129208 tgagtaccagccagagcaaaa 22129188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 19980957 - 19981163
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  19980957 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaagtagaagcacaatcgaa 19981056  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||  |||||||||||||| |||    
T  19981057 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcagccgatcctcattctcggtc 19981156  T
Q  201 tgagtac 207  Q
    |||||||    
T  19981157 tgagtac 19981163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 21164329 - 21164123
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| |||    
T  21164329 atacgagagaagtagtcactgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagaagaagcacaattgaa 21164230  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||||||||||||| || ||||||||||||||||||| ||||||| || ||||||||| |||||||||||||| |||||||||||||| |||    
T  21164229 agcaataaaacaatgcgtagcatcagtatcaataatagcaactaaaggagtatgatcaatataacatgtacctctgatcaagcgatcctcattctcggtc 21164130  T
Q  201 tgagtac 207  Q
    |||||||    
T  21164129 tgagtac 21164123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 21253940 - 21254141
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||||||    
T  21253940 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagcaa 21254039  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||| |||||||||||||| ||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  21254040 taaaataatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaagcgatcctcattctctgtctgtgt 21254139  T
Q  206 ac 207  Q
    ||    
T  21254140 ac 21254141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 22421678 - 22421477
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  22421678 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatttgacatagcaagacccaacttagaagcacaatcaatagcaa 22421579  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| |||||||||||||| |||| || ||| ||| || |||||||||||||||||||||||||||||| |||||||||| |||    
T  22421578 taaaacaatgtgtagcaccagtatcaataatagcagctaaaggtgtactatcaaaataacaagtacctctgatcaaacgatcctcgttctctgtctaagt 22421479  T
Q  206 ac 207  Q
    ||    
T  22421478 ac 22421477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 21391647 - 21391446
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||| ||    
T  21391647 agagaagtggtcaccgaacccttagctggagtttcaacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagaaa 21391548  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  21391547 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaaacgatcctcgttctctgtctgtgt 21391448  T
Q  206 ac 207  Q
    ||    
T  21391447 ac 21391446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 21780973 - 21780772
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||| ||    
T  21780973 agagaagtggtcaccgaacccttagctggagtttcaacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagaaa 21780874  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  21780873 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaaacgatcctcgttctctgtctgtgt 21780774  T
Q  206 ac 207  Q
    ||    
T  21780773 ac 21780772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22990035 - 22990241
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| | ||||||||||    ||| ||||||| |     
T  22990035 atacaagagaagtagtcaccgaacccttcgctggagtttcgacaaccatctctccattcatatttgacatagcaagacccaactttgaagcacaatcaat 22990134  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||||||  |||||| | ||||||||||||||||||| || ||| | | || |||||| |||||||||||||||||||||||||||||||||    
T  22990135 agcaataaaacaatgtttagcactagtatcaataatagcaactaaaggtgtactgtcaaaataacatgtacctctgatcaaacgatcctcattctctgtc 22990234  T
Q  201 tgagtac 207  Q
    || ||||    
T  22990235 tgcgtac 22990241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 22245801 - 22245608
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  22245801 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctatccattcatattcgacatagcaagacccaacttagaagcacaatcaatagcaa 22245702  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    |||||||||| ||||||| ||||| |||||||  || ||| || ||| ||| || |||||| |||||||| |||||||||||||||||||||||    
T  22245701 taaaacaatgtgtagcactaatatgaataatataaattaaaggtgtactatcaaaataacatgtacctctaatcaaacgatcctcattctctgt 22245608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 22246219 - 22246026
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  22246219 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctatccattcatattcgacatagcaagacccaacttagaagcacaatcaatagcaa 22246120  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    |||||||||| ||||||| ||||| |||||||  || ||| || ||| ||| || |||||| |||||||| |||||||||||||||||||||||    
T  22246119 taaaacaatgtgtagcactaatatgaataatataaattaaaggtgtactatcaaaataacatgtacctctaatcaaacgatcctcattctctgt 22246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 22523541 - 22523707
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  22523541 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatttgacatagcaagacccaacttagaagcacaatcaatagcaa 22523640  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacc 172  Q
    |||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| |||||    
T  22523641 taaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacc 22523707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 7 - 182
Target Start/End: Complemental strand, 22375239 - 22375064
Alignment:
Q  7 gagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaat 106  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | | ||||    
T  22375239 gagaagtagtcaccgaacccttagttggagtttcgacgaccatctctccattcatattcgacatagcaagacccaacttagaagcacaatcaatatcaat 22375140  T
Q  107 aaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaa 182  Q
    ||||||||| ||||||||| ||||||||||||||| ||| |||||| ||| ||  ||||| |||||||| ||||||    
T  22375139 aaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaa 22375064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 21786141 - 21786002
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||| ||    
T  21786141 agagaagtggtcaccgaacccttagctggagtttcaacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagaaa 21786042  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaa 145  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  21786041 taaaacaatgcgtagcaccagtatcaataatagcaactaa 21786002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 16269010 - 16268838
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  16269010 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaa 16268911  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  16268910 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 16268838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 21928423 - 21928595
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || |||||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  21928423 agagaagtagttactgaacccttagctggagtttcaacaaccatttcgccattcatatcagatataaccagacccaacttatatgcacaatcaacagcaa 21928522  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  21928523 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 21928595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 28983906 - 28984078
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| ||||| ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  28983906 agagaagtggttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatatatccaaacccaacttataagcacattcaatagcaa 28984005  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||||| || ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  28984006 taaaacagtgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 28984078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 31414318 - 31414146
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | ||| | ||||||   | || |||| ||   |||||    
T  31414318 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacatccaaacccaacttataagcacattcattagcaa 31414219  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| |||||||||||||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  31414218 tgaaacaatgagtagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 31414146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 19985175 - 19985347
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| | | | | ||||||   | |  ||||||| | | |||    
T  19985175 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagatataaccaaacccaacttatatgcacaatcaacaacaa 19985274  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  19985275 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 19985347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 22373864 - 22374036
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||||||||   | |  ||||||| | | |||    
T  22373864 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagatataactagacccaacttatatgcacaatcaacatcaa 22373963  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||| ||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  22373964 tgaaactatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 22374036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 28989125 - 28989297
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || ||||||||||||||||| || |||||||| ||||| ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  28989125 agagaagtggttactgaacccttagctggagtatcaacaaccatttctcctttcatatcagatatatccaaacccaacttataagcacattcaatagcaa 28989224  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||||| || ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  28989225 taaaacagtgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 28989297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 29301212 - 29301040
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |   ||||||||   | |  |||| || |||||||    
T  29301212 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaagcagacccaacttatatgcacattctaaagcaa 29301113  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||||||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  29301112 tgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 29301040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 22053858 - 22054045
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||| ||||||||   | |  |||  || ||||||    
T  22053858 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatc-agacccaacttatatgcactttctaaagca 22053956  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  22053957 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcatt 22054045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 22028066 - 22027894
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||  ||||||||||||||||||| |||||||| ||||| ||||||| ||| ||| | | ||||||   | |  |||| || | |||||    
T  22028066 agagaagtagttactaaacccttagctggagtttcaacaaccatttctcctttcatataagataaaaccaaacccaacttatatgcacattcaatagcaa 22027967  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  22027966 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 22027894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 20391078 - 20391282
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    |||||||||||||| || |||||||||||||||||||| |||||||| |||||| | |||   |||| | | ||||||||   | |  ||||||  | ||    
T  20391078 acgagagaagtagttactgaacccttagctggagtttcaacaaccatttctccactaatacttgacataaccagacccaacttatattcacaattaacag 20391177  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    |||| || ||||| ||||||||| |||||||||||| || ||| |||||| ||||||   |||||||||||||||| |  || ||||||||  |||||||    
T  20391178 caatgaatcaatgtgtagcaccagtatcaataatagaaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtctg 20391277  T
Q  203 agtac 207  Q
     ||||    
T  20391278 cgtac 20391282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 27357531 - 27357665
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  27357531 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaa 27357630  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagca 140  Q
    |||||||||| ||||||||| ||||||||||||||    
T  27357631 taaaacaatgagtagcaccagtatcaataatagca 27357665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 18881299 - 18881242
Alignment:
Q  150 gtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||| |||||||||||||||| ||||||| |||||| | ||||||||||| ||||    
T  18881299 gtattatcaatataacaagtacctttgatcaagcgatccccgttctctgtctgtgtac 18881242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 27559462 - 27559242
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27559462 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 27559363  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27559362 agcaataaaacaatgcgtagcaccattatcaataatagcaacaaatggagtattattaatataacaagtacctctgatcaaaccatcctcattctctgtc 27559263  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| ||| |||| ||||    
T  27559262 tgagtaccagctagagcaaaa 27559242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16574678 - 16574882
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16574678 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 16574777  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16574778 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 16574877  T
Q  201 tgagt 205  Q
    |||||    
T  16574878 tgagt 16574882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16620702 - 16620498
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16620702 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 16620603  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16620602 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 16620503  T
Q  201 tgagt 205  Q
    |||||    
T  16620502 tgagt 16620498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 2872295 - 2872089
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2872295 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 2872196  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  2872195 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 2872096  T
Q  201 tgagtac 207  Q
    |||||||    
T  2872095 tgagtac 2872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 29589932 - 29589728
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29589932 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 29589833  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29589832 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 29589733  T
Q  201 tgagt 205  Q
    |||||    
T  29589732 tgagt 29589728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 24293275 - 24293071
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24293275 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 24293176  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||  |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24293175 agcaataaaaccgtgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 24293076  T
Q  201 tgagt 205  Q
    |||||    
T  24293075 tgagt 24293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 28260690 - 28260486
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28260690 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaactcaagacccaaagcagaaacacaatcgaa 28260591  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28260590 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 28260491  T
Q  201 tgagt 205  Q
    |||||    
T  28260490 tgagt 28260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 28285226 - 28285430
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28285226 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaactcaagacccaaagcagaaacacaatcgaa 28285325  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28285326 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 28285425  T
Q  201 tgagt 205  Q
    |||||    
T  28285426 tgagt 28285430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 28339439 - 28339235
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28339439 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaactcaagacccaaagcagaaacacaatcgaa 28339340  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28339339 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggggtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 28339240  T
Q  201 tgagt 205  Q
    |||||    
T  28339239 tgagt 28339235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 28312418 - 28312622
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  28312418 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaactcaagacccaaagcagaaacacaattgaa 28312517  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  28312518 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattttctgtc 28312617  T
Q  201 tgagt 205  Q
    |||||    
T  28312618 tgagt 28312622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 25115340 - 25115546
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25115340 atacgagagaagtagtcaccgaacccttagctggagtttcgacaatcatctctccattcatatcagacaaatcaagacccgaagcagaaacacaatcgaa 25115439  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  25115440 agcaataaagcaatgcgtagtaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctccgtc 25115539  T
Q  201 tgagtac 207  Q
    |||||||    
T  25115540 tgagtac 25115546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 16925133 - 16924927
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16925133 atacgagagaagtagtcaccgatcccttagctggagtttcgacgaccatctctccattcatatcagacaaatcaagacccaaagtagaaacacaatcgaa 16925034  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  16925033 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcgctctctgtc 16924934  T
Q  201 tgagtac 207  Q
    || ||||    
T  16924933 tgtgtac 16924927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 5836710 - 5836515
Alignment:
Q  12 gtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaac 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||||    
T  5836710 gtagttaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagtataagcacaatcaaaagcaataaaac 5836611  T
Q  112 aatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  5836610 aatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattatatgtctgagtac 5836515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22436657 - 22436863
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  22436657 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaagtagaagcacaatcgaa 22436756  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| || ||||||||||| |||    
T  22436757 agcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaagcggtcctcattctcggtc 22436856  T
Q  201 tgagtac 207  Q
    |||||||    
T  22436857 tgagtac 22436863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 27190224 - 27190398
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  27190224 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctccccattcatatctgacaactcaagacccaaaccagaaacacaatcgaa 27190323  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  27190324 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27190398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 27259016 - 27258842
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  27259016 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctccccattcatatctgacaactcaagacccaaaccagaaacacaatcgaa 27258917  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  27258916 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctct 27258842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 19867475 - 19867681
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||| ||||| | |||| ||||||||||    
T  19867475 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctcttcattcatataagacataacaaggcccaaggtagaagcacaatcgaa 19867574  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||| |||||| ||||||| |||||||| ||||| |||    
T  19867575 agcaataaaacaatgcgtagcaccagtatcaataatagaaactaaaggagtattatcaatataacatgtacctttgatcaagcgatcctcgttctcggtc 19867674  T
Q  201 tgagtac 207  Q
    |||||||    
T  19867675 tgagtac 19867681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 210
Target Start/End: Complemental strand, 18405432 - 18405228
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||   || | ||||||| |||||||    
T  18405432 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacatagcaagacccaacttagtagcacaatcaaaagcaa 18405333  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||||||||| |||||||| |||||||||||||| |||| || ||| ||| || ||||||||||||||||||||| |||||||| |||||| |||| ||    
T  18405332 taaaacaatgcatagcaccagtatcaataatagcagctaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctctatctgtgt 18405233  T
Q  206 actag 210  Q
    |||||    
T  18405232 actag 18405228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 206
Target Start/End: Original strand, 23081216 - 23081416
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||| | ||| ||||||   |||| ||||||| | |||||    
T  23081216 agagaagtagtcactgaacccttagctggagtttcgacaaccatctctccattaatatttgacatagcaaaacccaacttagaagcacaatcaatagcaa 23081315  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||    
T  23081316 taaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaaacgatcctcattctctgtctgagt 23081415  T
Q  206 a 206  Q
    |    
T  23081416 a 23081416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 18182855 - 18182654
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  18182855 agagaagtagtcaccgaacccttagctggagtttcgactaccatctctccattcatatttgacatagcaagacccaacttagaagcacaatcaatagcaa 18182756  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||   |||| ||||||||||||||||||||||||| ||| |||||| ||| ||  ||||| |||||||| |||||| |||||||||| |||||||| ||    
T  18182755 taaggaaatgtgtagcaccaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaatgatcctcattatctgtctgtgt 18182656  T
Q  206 ac 207  Q
    ||    
T  18182655 ac 18182654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 80 - 207
Target Start/End: Complemental strand, 22829800 - 22829673
Alignment:
Q  80 caaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatc 179  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  22829800 caaagcagaaacacaatcgaaagcaataacgcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatc 22829701  T
Q  180 aaacgatcctcattctctgtctgagtac 207  Q
    || |||||| | ||||| ||||||||||    
T  22829700 aagcgatccccgttctccgtctgagtac 22829673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 23085313 - 23085117
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   |||| |  |||||||||   |||| || |||| | | |||    
T  23085313 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatacttgacatagtaagacccaacttagaagcataatcaacaacaa 23085214  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    |||||||||| ||||||||| | |||||||||| |||||| |||||| ||| || |||||| |||||||| ||||| || |||||||||||||||||    
T  23085213 taaaacaatgtgtagcaccagtttcaataatagaaactaaaggagtactatcaaaataacatgtacctctaatcaatcggtcctcattctctgtctg 23085117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 30678512 - 30678319
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| || |||| ||||   |||| | ||||||||||   |||| |||||||   |||||    
T  30678512 agagaagtagtaaccaaacccttagctggagtttcgacaaccatttccccatccatacatgacataacaagacccaacttagaagcacaatcagtagcaa 30678413  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    |||||||| ||||||||| ||||||||||||||||| ||| | |||| ||||||   |||| |||||||||||||| |||||||||||| ||||    
T  30678412 taaaacaacgcgtagcacaaatatcaataatagcaattaaagaagtactattaaagaaacatgtacctctgatcaaccgatcctcattcactgt 30678319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 18797483 - 18797668
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||| ||||| | |||||| ||||||   | |  |||| || ||||||    
T  18797483 agagaagtagtcactgaacccttagctagagtttcaacaaccatctctcctttcatgtcagatacaatcaa-acccaacttatatgcacattctaaagca 18797581  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    || |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  18797582 atgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 18797668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 19437795 - 19437967
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | |||| |||   | || |||| || | |||||    
T  19437795 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcccttcatatcagatacaactagactcaacttataagcacattcaatagcaa 19437894  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  19437895 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 19437967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 19455816 - 19455988
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  19455816 agagaagtagttactgaacccttagctggagtttcaacaaccatttcacctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 19455915  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  19455916 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 19455988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 25756956 - 25756888
Alignment:
Q  153 ttattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagccagagtaaaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  25756956 ttattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtaccagccagagcaaaa 25756888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 25770637 - 25770809
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||| ||||||| ||| |||||||| ||||||||||||||||||| | | ||||||||   | || ||||||| | | |||    
T  25770637 agagaagtagtgattgaaccctttgctggagattcaacaaccatttctccattcatatcagacataaccagacccaacttataagcacaatcaacaacaa 25770736  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | ||||||||  ||||||||||||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  25770737 tgaaacaatgaatagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 25770809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 178
Target Start/End: Original strand, 19465976 - 19466133
Alignment:
Q  21 gaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtag 120  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | || |||| || | |||||| |||||||| ||||    
T  19465976 gaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttataagcacattcaatagcaatgaaacaatgagtag 19466075  T
Q  121 caccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  19466076 caccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 19466133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 10466336 - 10466164
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  10466336 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaa 10466237  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| |||||| || |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  10466236 taaaacaatgagtagcaacagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 10466164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 15462129 - 15462316
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||| | ||||| |||||||   | |  |||| || ||||||    
T  15462129 agagaagtagttactgaacccttggctggagtttcaacaaccatttctcctttcatatcagatacaatca-gacccaacttatatgcacattctaaagca 15462227  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||||    
T  15462228 atgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatt 15462316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 178
Target Start/End: Original strand, 21474394 - 21474565
Alignment:
Q  7 gagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaat 106  Q
    |||||||||| || |||||||||||||||||||| |||||||| | || |||||||||||||| | | ||||||||   | |  ||||||| | | ||||    
T  21474394 gagaagtagttactgaacccttagctggagtttcaacaaccatttttctattcatatcagacataaccagacccaacttatatgcacaatcaacaacaat 21474493  T
Q  107 aaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
     |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||| ||||||||||    
T  21474494 caaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaaatacctctgat 21474565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 24367193 - 24367365
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || ||| |||||||||||||||| |||||||| || || ||||||||||| | |||  |||||||   | |  |||| || | |||||    
T  24367193 agagaagtggttactgaatccttagctggagtttcaacaaccatttcccctttcatatcagatatatccggacccaactgatatgcacattcaatagcaa 24367292  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||| ||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  24367293 taaaacaatgagtagcaccagtattaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 24367365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 34643074 - 34642902
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| ||||||||||| |||||||| || ||||| ||||| ||||||||||||| |||||| |||||    | || |||| || ||||||    
T  34643074 agagaagtagtcactgaacccttagccggagtttcaacgaccatttctcctttcatatcagacacaatcaa-acccagtttataagcacactctaaagca 34642976  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| | || |||||||| | ||| ||  || ||||||   ||||||||||||||||    
T  34642975 atgaaacaatgtgtagcaccagtgtctataatagcgattaaagggatactattaaagaaacaagtacctctgat 34642902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 19486782 - 19486610
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||  ||||||||||||||||||| |||||||| |||| | |||||   ||||   | ||||||||   | |  ||||||| | |||||    
T  19486782 agagaagtagttactaaacccttagctggagtttcaacaaccatttctctactcatacttgacatgaccagacccaacttatatgcacaatcaacagcaa 19486683  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| ||||||||||| ||| ||| |||||| ||||||   ||||||||||||||||    
T  19486682 tgaaacaatgtgtagcaccagtatcaataataacaattaaaggagtactattaaagaaacaagtacctctgat 19486610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 24515902 - 24515717
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||| |||| |||||||||| |||||||| || || ||||||||||| | | | ||||||||   | || |||| || | | |||    
T  24515902 agagaagtagttaatgaacacttaactggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaacttataagcacattcaataacaa 24515803  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  24515802 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 24515717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 21567479 - 21567419
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcag 66  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||| ||||| ||||    
T  21567479 agagaagtagttactgaacccttagctggagtttcaacaaccatctctcctttcatgtcag 21567419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 14377388 - 14377232
Alignment:
Q  22 aacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagc 121  Q
    ||||||| ||||||||||| |||||||| ||||| ||||||||||| | | | | ||||||   | || |||| || | |||||| |||||||| ||| |    
T  14377388 aaccctttgctggagtttcaacaaccatttctcctttcatatcagatacaaccaaacccaacttataagcacattcaatagcaatgaaacaatgagtaac 14377289  T
Q  122 accaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||| | || |||||||||| ||| ||| || ||||||   ||||||||||||||||    
T  14377288 accagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgat 14377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 27205579 - 27205614
Alignment:
Q  170 acctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||||||||||||||||||||||||||||||||||    
T  27205579 acctctgatcaaacgatcctcattctctgtctgagt 27205614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 27243649 - 27243614
Alignment:
Q  170 acctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||||||||||||||||||||||||||||||||||    
T  27243649 acctctgatcaaacgatcctcattctctgtctgagt 27243614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 20010942 - 20010885
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatat 63  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| || || |||||||    
T  20010942 agagaagtagttactgaacccttggctggagtttcaacaaccatttcccctttcatat 20010885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17113 - 17333
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17113 atacgagagaagtagtcatcgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 17212  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17213 agcaataaaacaatgcgtagcaccagtatcaataatagaaactaaaggagttttattaatataacaagtacctctgatcaaacgatcctcattctctgtc 17312  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  17313 tgagtaccagccagagcaaaa 17333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 3377 - 3583
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3377 atacgagagaagtagtcatcgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaggcagaaacacaatcgaa 3476  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  3477 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 3576  T
Q  201 tgagtac 207  Q
    |||||||    
T  3577 tgagtac 3583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8710518 - 8710722
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8710518 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 8710617  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8710618 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 8710717  T
Q  201 tgagt 205  Q
    |||||    
T  8710718 tgagt 8710722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 14335309 - 14335513
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14335309 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 14335408  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14335409 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 14335508  T
Q  201 tgagt 205  Q
    |||||    
T  14335509 tgagt 14335513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18587528 - 18587324
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18587528 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 18587429  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18587428 agcaataaaacaatgcgtagcaccagtatcaataataacaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 18587329  T
Q  201 tgagt 205  Q
    |||||    
T  18587328 tgagt 18587324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 44788708 - 44788504
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44788708 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagataaatcaagacccaaagcagaaacacaatcgaa 44788609  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44788608 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 44788509  T
Q  201 tgagt 205  Q
    |||||    
T  44788508 tgagt 44788504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 13688954 - 13689160
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13688954 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagacacacaatcgaa 13689053  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  13689054 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 13689153  T
Q  201 tgagtac 207  Q
    |||||||    
T  13689154 tgagtac 13689160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 9591277 - 9591497
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  9591277 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccgaagcagaaacacaattgaa 9591376  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9591377 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 9591476  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  9591477 tgagtaccagccagagcaaaa 9591497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 17703812 - 17703600
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17703812 atacgagagaagtagtcaccgaacccttaactggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 17703713  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17703712 agcaataaagcaatgtgtagcactagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 17703613  T
Q  201 tgagtactagcca 213  Q
    ||||||| |||||    
T  17703612 tgagtaccagcca 17703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 11234570 - 11234364
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11234570 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaaaaatcaagacccaaagcagaaacacaatcgaa 11234471  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11234470 agcaataaaacaatgcgtagcaccagtattaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 11234371  T
Q  201 tgagtac 207  Q
    |||||||    
T  11234370 tgagtac 11234364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15158414 - 15158208
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15158414 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 15158315  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15158314 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 15158215  T
Q  201 tgagtac 207  Q
    |||||||    
T  15158214 tgagtac 15158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 18180656 - 18180860
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  18180656 atacaagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagataactcaagacccaaagcagaaacacaatcgaa 18180755  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18180756 agcaataaagcaatgcgtagcaccagtatcaataataacaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 18180855  T
Q  201 tgagt 205  Q
    |||||    
T  18180856 tgagt 18180860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 11550459 - 11550253
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||    
T  11550459 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaggcagatacacaatcaaa 11550360  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  11550359 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcatcctctgtc 11550260  T
Q  201 tgagtac 207  Q
    |||||||    
T  11550259 tgagtac 11550253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12690415 - 12690620
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  12690415 atacgagagaagtagtcaccgaacccttagctggagtttcaacgaccatctctcaactcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 12690514  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||| | ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  12690515 agcaataaagcaatgagtagcactagtat-aataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcatcctctgtc 12690613  T
Q  201 tgagtac 207  Q
    |||||||    
T  12690614 tgagtac 12690620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14957467 - 14957652
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14957467 atacgagagaagtagtcactgaacccttagctggagtttcaacgaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 14957566  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgat 186  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  14957567 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgat 14957652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15146280 - 15146074
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||   |||| ||||||| |     
T  15146280 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatccgacaaagcaagacccaacttagaagcacaatcaag 15146181  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||  ||||||||||||| ||||||||| |||| |||||||||||||| |||    
T  15146180 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgttctattaatataacatgtacctctgctcaagcgatcctcattctcagtc 15146081  T
Q  201 tgagtac 207  Q
    |||||||    
T  15146080 tgagtac 15146074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 55 - 213
Target Start/End: Complemental strand, 16726744 - 16726586
Alignment:
Q  55 cattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtatt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||||||    
T  16726744 cattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaagcaatgtgtagcactagtatcaataatagcaactaaaggagtatt 16726645  T
Q  155 attaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagcca 213  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16726644 attaatatatcaagtacctctgatcaaacgatcctcattctctgtctgagtaccagcca 16726586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8200961 - 8201074
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8200961 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 8201060  T
Q  101 agcaataaaacaat 114  Q
    ||||||||||||||    
T  8201061 agcaataaaacaat 8201074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 14042613 - 14042814
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||  |||| | ||||||||||   |  | ||||||| | |||||    
T  14042613 agagaagtagtcacaaaacccttagcttgagtttcgacaaccatctctccatttatatttgacatagcaagacccaacttaatagcacaatcaatagcaa 14042712  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||| ||||||| || ||| ||| || |||||| ||||||||||||||  |||||||| |||| ||||||||    
T  14042713 taaaacaatgcgtagcaccagtatcaataataacaactaaaggtgtactatcaaaataacatgtacctctgatcaagtgatcctcactctcggtctgagt 14042812  T
Q  206 ac 207  Q
    ||    
T  14042813 ac 14042814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 14352643 - 14352844
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||  |||| | ||||||||||   |  | ||||||| | |||||    
T  14352643 agagaagtagtcacaaaacccttagcttgagtttcgacaaccatctctccatttatatttgacatagcaagacccaacttaatagcacaatcaatagcaa 14352742  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||| ||||||| || ||| ||| || |||||| ||||||||||||||  |||||||| |||| ||||||||    
T  14352743 taaaacaatgcgtagcaccagtatcaataataacaactaaaggtgtactatcaaaataacatgtacctctgatcaagtgatcctcactctcggtctgagt 14352842  T
Q  206 ac 207  Q
    ||    
T  14352843 ac 14352844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 11984032 - 11984119
Alignment:
Q  128 atcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagccaga 215  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  11984032 atcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctatctgagtaccagccaga 11984119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 18051283 - 18051096
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||| ||||||   | |  |||  || ||||||    
T  18051283 agagaagtagtcactgaacccttagctggagtttcaacaaccatttctcccttcatatcagacacaatcaa-acccaacctatatgcactttctaaagca 18051185  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  18051184 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcatt 18051096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 21755331 - 21755503
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || | ||||||||| | ||| | ||||||   | || |||| || | |||||    
T  21755331 agagaagtggttactgaacccttagctggagtttcaacaaccatttccccttccatatcagatacatccaaacccaacttataagcacattcaatagcaa 21755430  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  21755431 taaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 21755503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 26115920 - 26115748
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  26115920 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 26115821  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  26115820 taaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 26115748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 40925147 - 40924975
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  40925147 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatatatccaaacccaacttataagcacattcaatagcaa 40925048  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  40925047 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 40924975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 15627444 - 15627588
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||   |||| ||||||||||||   || | ||||||| |  ||||||    
T  15627444 agaagtagtcaccgaacccttagctggagtttcgaaaaccatttcctcattcatactcgacatatcaagacccaacataggagcacaatcaacggcaata 15627543  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagta 152  Q
    |||||||||||| ||||| |||||||||||| || ||| ||||||    
T  15627544 aaacaatgcgtatcaccagtatcaataatagtaattaaaggagta 15627588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 16947802 - 16947630
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  16947802 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacatccaaacccaacttataagcacattcaatagcaa 16947703  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| |||  ||||| ||||||   ||||||||||||||||    
T  16947702 tgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgat 16947630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 26092128 - 26091956
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  26092128 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 26092029  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  26092028 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 26091956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 49155220 - 49155392
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  49155220 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatatatccaaacccaacttatatgcacattcaatagcaa 49155319  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  49155320 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 49155392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 10873603 - 10873662
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattca 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10873603 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattca 10873662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 13676370 - 13676555
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  13676370 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 13676469  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| |||||||||   || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  13676470 tgaaacaatgagtagcaccagcgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 13676555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 178
Target Start/End: Complemental strand, 13965983 - 13965826
Alignment:
Q  21 gaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtag 120  Q
    |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | ||||||||||||||| ||||    
T  13965983 gaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaataaaacaatgagtag 13965884  T
Q  121 caccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  13965883 caccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 13965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 13024264 - 13024435
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | ||| | ||||||   | || |||  || |||||||    
T  13024264 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacatccaaacccaacttataagcactttctaaagcaa 13024363  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||  ||||||   ||||||||||||||||    
T  13024364 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagt-ctattaaagaaacaagtacctctgat 13024435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 15099933 - 15099761
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  15099933 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaactagacccaacttatatgcacaatcaacagcaa 15099834  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||| ||||| |||| |||||||||| ||| |||||| ||||||   ||||||||| ||||||    
T  15099833 tgaaacaatgagtatcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacatctgat 15099761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 19149930 - 19150102
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||||| ||   | |  ||||||| | | |||    
T  19149930 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagatacaaccagacctaacttatatgcacaatcaacaacaa 19150029  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| |||| |||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  19150030 tgaaacaatgagtagaaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 19150102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 20749329 - 20749501
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||||| ||   | |  ||||||| | | |||    
T  20749329 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagatacaaccagacctaacttatatgcacaatcaacaacaa 20749428  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| |||| |||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  20749429 tgaaacaatgagtagaaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 20749501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 12798831 - 12798638
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||| ||||||| |||||||| | ||| ||||||||||| | | | ||||||||   | |  ||||||| | | |||    
T  12798831 agagaagtagttactgaacccttagcttgagtttcaacaaccatttttcctttcatatcagatacaaccagacccaacttatatgcacaatcaacaacaa 12798732  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  12798731 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 12798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 12459547 - 12459719
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  12459547 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaa 12459646  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||  |||||| || |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  12459647 taaaacaattagtagcatcagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 12459719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 14261576 - 14261404
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||  ||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||||||||   | |  | ||||| | | |||    
T  14261576 agagaagtagttactaaacccttagctggagtttcaacaaccatttctccattcatatcagatacaaccagacccaacttatatgctcaatcaacaacaa 14261477  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   || |||||||||||||    
T  14261476 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaataagtacctctgat 14261404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 11385759 - 11385587
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||  | |||||||||||||||||||| |||||||||||||| ||||||||| | | |||| ||||||||   | |  |||| || ||||||    
T  11385759 agagaagtagttcctgaacccttagctggagtttcaacaaccatctctcctttcatatcaaatacaatc-agacccaacttatatgcacattctaaagca 11385661  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| |||||| || | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  11385660 atgaaacaatgagtagcatcagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 11385587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 14140598 - 14140770
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | |||| ||||||   | |  |||  || ||||||    
T  14140598 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcccttcatatcagatacactcaa-acccaacttatatgcactttctaaagca 14140696  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  14140697 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 14140770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 14283704 - 14283532
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||| ||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||| || | ||||    
T  14283704 agagaagtagttactgaacccttggctagagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcacattcaatagca 14283606  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||||| || ||||||||||  || |||||| ||||||   ||||||||||||||||    
T  14283605 atgaaacaatgagtagcaccaatgtctataatagcaatgaaaggagtactattaaagaaacaagtacctctgat 14283532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 15343350 - 15343522
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| ||   |||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  15343350 agagaagtagttactttacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 15343448  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  15343449 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 15343522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 12204130 - 12203943
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||| ||||||| |||||||| |||||| |||||   |||| | | ||||||||   | |  ||||||| | | |||    
T  12204130 agagaagtagttattgaacccttagctagagtttcaacaaccatttctccactcatacttgacataaccagacccaacttatatgcacaatcaacaacaa 12204031  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    | |||||||| ||||||||| | || |||||||||| ||| ||| || ||||||   |||||||||||||||| |  |||||||||||    
T  12204030 tgaaacaatgtgtagcaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctcatt 12203943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 41773698 - 41773902
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41773698 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 41773797  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41773798 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 41773897  T
Q  201 tgagt 205  Q
    |||||    
T  41773898 tgagt 41773902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16359358 - 16359562
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16359358 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 16359457  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16359458 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 16359557  T
Q  201 tgagt 205  Q
    |||||    
T  16359558 tgagt 16359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 18781970 - 18782190
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18781970 atacgagagaagtagtcacggaacccttagctggagtttcaacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 18782069  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18782070 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 18782169  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  18782170 tgagtaccagccagagcaaaa 18782190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27521262 - 27521466
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27521262 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaccaagacccaaagcagaaacacaatcgaa 27521361  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27521362 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 27521461  T
Q  201 tgagt 205  Q
    |||||    
T  27521462 tgagt 27521466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27613212 - 27613416
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27613212 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 27613311  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27613312 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 27613411  T
Q  201 tgagt 205  Q
    |||||    
T  27613412 tgagt 27613416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 34569350 - 34569554
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34569350 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 34569449  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34569450 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 34569549  T
Q  201 tgagt 205  Q
    |||||    
T  34569550 tgagt 34569554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22330417 - 22330211
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22330417 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 22330318  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||    
T  22330317 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttatctgtc 22330218  T
Q  201 tgagtac 207  Q
    |||||||    
T  22330217 tgagtac 22330211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 27682930 - 27682724
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27682930 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaaacaaatcaagacccaaagcagaaacacaatcgaa 27682831  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  27682830 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 27682731  T
Q  201 tgagtac 207  Q
    |||||||    
T  27682730 tgagtac 27682724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 29473603 - 29473397
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29473603 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 29473504  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  29473503 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 29473404  T
Q  201 tgagtac 207  Q
    |||||||    
T  29473403 tgagtac 29473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19772816 - 19773020
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19772816 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 19772915  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  19772916 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaaagatcctcattctctgtc 19773015  T
Q  201 tgagt 205  Q
    |||||    
T  19773016 tgagt 19773020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 40711636 - 40711840
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40711636 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 40711735  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  40711736 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaagatagcaagtacctctgatcaaacgatcctcattctctgtc 40711835  T
Q  201 tgagt 205  Q
    |||||    
T  40711836 tgagt 40711840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 37289026 - 37288820
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37289026 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaaaaatcaagacccaaagcagaaacacaatcgaa 37288927  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  37288926 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 37288827  T
Q  201 tgagtac 207  Q
    |||||||    
T  37288826 tgagtac 37288820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 27666020 - 27665816
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27666020 atacgagagaagtagtcaccgaacccttagtcggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 27665921  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  27665920 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcgtcattctctgtc 27665821  T
Q  201 tgagt 205  Q
    |||||    
T  27665820 tgagt 27665816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22137524 - 22137730
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22137524 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 22137623  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  22137624 agcaataaagcaatgcgtatcaccattatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctctgtc 22137723  T
Q  201 tgagtac 207  Q
    |||||||    
T  22137724 tgagtac 22137730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 14997269 - 14997063
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14997269 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcaaa 14997170  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  14997169 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctccgtc 14997070  T
Q  201 tgagtac 207  Q
    || ||||    
T  14997069 tgcgtac 14997063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 21882630 - 21882842
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  21882630 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacatagcaagacccaaagtagaagcacaatcgaa 21882729  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  21882730 agcaataaaacaatgcgtagcaccagtatcaataataccaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcattctttgtc 21882829  T
Q  201 tgagtactagcca 213  Q
    || |||| |||||    
T  21882830 tgtgtaccagcca 21882842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 22350775 - 22350981
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22350775 atacgagataagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagtagaaacacaatcgaa 22350874  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| || ||||| |||    
T  22350875 agcaataaagcaatgcgtagcactagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcatcgttctccgtc 22350974  T
Q  201 tgagtac 207  Q
    |||||||    
T  22350975 tgagtac 22350981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 23460827 - 23461033
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||    
T  23460827 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctcttcattcatatcagacaaatcaagacccaaagtagaagcacaatcgaa 23460926  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| |||    
T  23460927 agcaataaaaacatgggtagcaccaatatcaataatagcaactaaaggagtattattaatacagcaagtacctctgatcaaacgatcctcattctcggtc 23461026  T
Q  201 tgagtac 207  Q
    | |||||    
T  23461027 taagtac 23461033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20803453 - 20803615
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||||||    
T  20803453 atacgagagaagtagtcaccaaacccttagctggagtttcgacaaccatctttccattcatatcagacaaagcgagacccaaagtagaaacacaatcgaa 20803552  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatata 163  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||    
T  20803553 agcaataaaacaatgcgtagcactagtatcaataatagcaactaaaggagtattattaatata 20803615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 25429282 - 25429483
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||   || | || |||| |||||||    
T  25429282 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaaacataacaagacccaacttagtagcaaaatcaaaagcaa 25429381  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||||||||| |||||||| |||| |||||| ||    
T  25429382 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgatcaagcgatcctcgttctatgtctgtgt 25429481  T
Q  206 ac 207  Q
    ||    
T  25429482 ac 25429483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 26736257 - 26736051
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||| | ||||||||||   |||| ||||||| |     
T  26736257 atacaagagaagtagtcaccaaacccttagttggagtttcgacaaccatctctccattcatatttgacatagcaagacccaacatagaagcacaatcaat 26736158  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    || |||||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||||||||||||||||||||||||||| |||||||||    
T  26736157 agaaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaaacgatcctcgttctctgtc 26736058  T
Q  201 tgagtac 207  Q
    |||||||    
T  26736057 tgagtac 26736051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 21342944 - 21342824
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21342944 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 21342845  T
Q  101 agcaataaaacaatgcgtagc 121  Q
    ||||||||| |||||||||||    
T  21342844 agcaataaagcaatgcgtagc 21342824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 207
Target Start/End: Original strand, 23525952 - 23526113
Alignment:
Q  46 ccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaa 145  Q
    |||||||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||||||||| || |||||| |||||||||||||||||||    
T  23525952 ccatctctccattcatatcagacatatcaagacccaacgtagaagcacaatcgaaagcaataaaacaatgtgttgcaccagtatcaataatagcaactaa 23526051  T
Q  146 tggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
     ||||||||||||||||| ||||||||||||||||| |||||||||||||| || |||||||    
T  23526052 aggagtattattaatatagcaagtacctctgatcaagcgatcctcattctcggtttgagtac 23526113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 21631924 - 21631723
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  21631924 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttccccattcatattcgacataacaagacccaacttagaagcacaatcaacagcaa 21631825  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||| ||||||||||| ||| |||||| ||| ||  ||||| |||||||| ||||| || ||||||||| ||||||| ||    
T  21631824 taaaacaatgcgtagcaccagtattaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaccggtcctcattcactgtctgtgt 21631725  T
Q  206 ac 207  Q
    ||    
T  21631724 ac 21631723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 23474056 - 23474252
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || | | ||||||||   ||||  |||||| | |||||    
T  23474056 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattcgtcatagccagacccaacttagaagtacaatcaatagcaa 23474155  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    |||||||||| ||||||||  ||||||||||||||||||| || |||  || || |||||| |||||||| ||||| ||||||||||| ||||||||    
T  23474156 taaaacaatgtgtagcaccggtatcaataatagcaactaaaggtgtacaatcaaaataacatgtacctctaatcaatcgatcctcattttctgtctg 23474252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 207
Target Start/End: Complemental strand, 21332431 - 21332310
Alignment:
Q  86 agaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacga 185  Q
    |||| ||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| ||||||||||||||||||    
T  21332431 agaagcacaatcaatagcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaaacga 21332332  T
Q  186 tcctcattctctgtctgagtac 207  Q
    |||||||||||| |||||||||    
T  21332331 tcctcattctctatctgagtac 21332310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21409990 - 21410196
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| |||||| ||||||||||| ||||||| || |||||||||||||| || ||||| |||   |||| | ||||||||||    |||||||||||       
T  21409990 atactagagaactagtcaccgaagccttagccggggtttcgacaaccatttccccattaatagatgacataacaagacccaatttcgaaacacaatcagc 21410089  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||  ||||||||| |||| || |||| || ||| |||||| |||||||  |||| ||||||||||||| |||||||||||||||||||    
T  21410090 agcaataaaacaatatgtagcaccagtatctatgatagtaattaagggagtactattaatgaaacatgtacctctgatcagacgatcctcattctctgtc 21410189  T
Q  201 tgagtac 207  Q
    | |||||    
T  21410190 taagtac 21410196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 14884516 - 14884344
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||||| ||| | ||||||   | |  |||| || | |||||    
T  14884516 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagacacatctaaacccaacttatatgcacattcaatagcaa 14884417  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  14884416 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 14884344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 23078430 - 23078258
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | ||| | ||||||   | || |||| || |  ||||    
T  23078430 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcccttcatatcagatacatccaaacccaacttataagcacattcaattgcaa 23078331  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  23078330 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 23078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 178
Target Start/End: Complemental strand, 21983705 - 21983530
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    |||||||||||||| || |||||||||||||||||||| |||||||| |||||| |||||   |||| | | ||||||||   | |  ||||||| | ||    
T  21983705 acgagagaagtagttactgaacccttagctggagtttcaacaaccatttctccactcatacttgacataaccagacccaacttatatgcacaatcaacag 21983606  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||| |||||||| ||||||||| |||||||||||| || ||| |||||| ||||||   ||||||||||||||||    
T  21983605 caatgaaacaatgtgtagcaccagtatcaataatagtaattaaaggagtactattaaagaaacaagtacctctgat 21983530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 178
Target Start/End: Original strand, 20345140 - 20345297
Alignment:
Q  21 gaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtag 120  Q
    |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | ||||||||||||||| ||||    
T  20345140 gaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaataaaacaatgagtag 20345239  T
Q  121 caccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  20345240 caccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 20345297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 20824296 - 20824483
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||| | ||||| |||||||   | |  |||| || ||||||    
T  20824296 agagaagtagttactgaacccttggctggagtttcaacaaccatttctcctttcatatcagatataatca-gacccaacttatatgcacactctaaagca 20824394  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||||    
T  20824395 atgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatt 20824483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 22505522 - 22505694
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| || || ||||||| ||| | ||| | ||||||   | || |||| || | |||||    
T  22505522 agagaagtagttattgaacccttagctggagtttcaacaaccatttcccctttcatattagatacatccaaacccaacttataagcacattcaatagcaa 22505621  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  22505622 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctttgat 22505694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 28892467 - 28892280
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||| | ||||| |||||||   | |  |||| || ||||||    
T  28892467 agagaagtagttactgaacccttggctggagtttcaacaaccatttctcctttcatatcagatacaatca-gacccaacttatatgcacattctaaagca 28892369  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||||||||||||| | || |||||||||| ||| ||||||  |||||   |||||||||||||||| |  |||||||||||    
T  28892368 atgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtaccattaaagaaacaagtacctctgataagtcgatcctcatt 28892280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 20778756 - 20778943
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||| | |   || |||||   | |  |||| || |||||||    
T  20778756 agagaagtagtcactgaacccttggctggagtttcaacaaccatttctcctttcatatcagatacaattaggcccaacttatatgcacattctaaagcaa 20778855  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||||    
T  20778856 tgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatt 20778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 25850915 - 25851102
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || ||||| |||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  25850915 agagaagtggttactgaacctttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaa 25851014  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    |||||||||| ||||||||| ||||||||||||||| |||  ||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  25851015 taaaacaatgagtagcaccagtatcaataatagcaattaaatgagtactattaaagaaacaagtacctctgataagacggtcctcatt 25851102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 21336818 - 21336743
Alignment:
Q  7 gagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaa 82  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||| | ||||||||||    
T  21336818 gagaagtagtcaccaaacccttaactggagtttcgacaaccatctctccattcatatttgacatagcaagacccaa 21336743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 178
Target Start/End: Complemental strand, 21561553 - 21561378
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    |||||||||||||| || |||||||||||||||||||| |||||||| |||||| |||||   |||| | | | ||| ||   | |  ||||||| | ||    
T  21561553 acgagagaagtagttactgaacccttagctggagtttcaacaaccatttctccactcatacttgacataaccatacctaacttatatgcacaatcaacag 21561454  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||| | |||| ||||||   ||||||||||||||||    
T  21561453 caatgaaacaatgtgtagcaccagtatcaataatagcaattaaagaagtactattaaagaaacaagtacctctgat 21561378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 17266859 - 17266672
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| | ||||| || ||| ||||||   | |  |||  || ||||||    
T  17266859 agagaagtagtcactgaacccttagctggagtttcaacaaccatttctcctttcatgttagacacaaacaa-acccaacctatatgcactttctaaagca 17266761  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||| |||| | ||| ||||||||    
T  17266760 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctttgatgagacggtcctcatt 17266672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 22464793 - 22464965
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| || || ||||||||||| | |   || |||||   | |  |||| || |||||||    
T  22464793 agagaagtagttactgaacccttggctggagtttcaacaaccatttcccctttcatatcagatacaattaggcccaacttatatgcacattctaaagcaa 22464892  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||||||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  22464893 tgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 22464965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 23563693 - 23563521
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  23563693 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatatatccatacccaacttatatgcacattcaatagcaa 23563594  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | ||||| || ||||||||| | || |||||| ||| ||| |||||| ||||||   ||||||||||||||||    
T  23563593 ttaaacattgagtagcaccagtttctataatatcaattaaaggagtactattaaagaaacaagtacctctgat 23563521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20311706 - 20311754
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccat 49  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  20311706 atactagagaagtagtcaccgaacccttagttggggtttcgacaaccat 20311754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 20803613 - 20803654
Alignment:
Q  135 atagcaactaatggagtattattaatataacaagtacctctg 176  Q
    |||| |||||| | ||||||||||||||||||||||||||||    
T  20803613 atagaaactaaagaagtattattaatataacaagtacctctg 20803654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 12479524 - 12479728
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12479524 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 12479623  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12479624 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 12479723  T
Q  201 tgagt 205  Q
    |||||    
T  12479724 tgagt 12479728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 8050711 - 8050505
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8050711 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 8050612  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8050611 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 8050512  T
Q  201 tgagtac 207  Q
    |||||||    
T  8050511 tgagtac 8050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 14301067 - 14300861
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14301067 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 14300968  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  14300967 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 14300868  T
Q  201 tgagtac 207  Q
    |||||||    
T  14300867 tgagtac 14300861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8389336 - 8389540
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8389336 atacgagtgaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 8389435  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8389436 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 8389535  T
Q  201 tgagt 205  Q
    |||||    
T  8389536 tgagt 8389540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16234080 - 16233876
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16234080 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 16233981  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  16233980 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcactctctgtc 16233881  T
Q  201 tgagt 205  Q
    |||||    
T  16233880 tgagt 16233876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23958671 - 23958875
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23958671 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 23958770  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  23958771 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcgtcattctctgtc 23958870  T
Q  201 tgagt 205  Q
    |||||    
T  23958871 tgagt 23958875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27714260 - 27714464
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27714260 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 27714359  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27714360 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 27714459  T
Q  201 tgagt 205  Q
    |||||    
T  27714460 tgagt 27714464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 19635060 - 19635266
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19635060 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 19635159  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  19635160 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctctgtc 19635259  T
Q  201 tgagtac 207  Q
    |||||||    
T  19635260 tgagtac 19635266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 17092237 - 17092033
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  17092237 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaggcagaaacacaatcgaa 17092138  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17092137 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 17092038  T
Q  201 tgagt 205  Q
    |||||    
T  17092037 tgagt 17092033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18224534 - 18224314
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18224534 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 18224435  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  18224434 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagatcctctgatcaaacgatcctcattctctgtc 18224335  T
Q  201 tgagtactagccagagtaaaa 221  Q
    | ||||| |||||||| ||||    
T  18224334 taagtaccagccagagcaaaa 18224314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 19775877 - 19775677
Alignment:
Q  5 gagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19775877 gagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagca 19775778  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgag 204  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  19775777 ataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcgtcattctctgtctgag 19775678  T
Q  205 t 205  Q
    |    
T  19775677 t 19775677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 40475964 - 40476170
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40475964 atacgagagaagtagtcaccgaacccttagctggagtttcgaccaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 40476063  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  40476064 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctccgtc 40476163  T
Q  201 tgagtac 207  Q
    || ||||    
T  40476164 tgcgtac 40476170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 13513285 - 13513494
Alignment:
Q  12 gtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |    
T  13513285 gtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccgaagcagaaacacaattgaaagcaataaagc 13513384  T
Q  112 aatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagc 211  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  13513385 aatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtctgagtaccagc 13513484  T
Q  212 cagagtaaaa 221  Q
    ||||| ||||    
T  13513485 cagagcaaaa 13513494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 16350642 - 16350430
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  16350642 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatccgacaaatcaagacccaaagtagaaacacaatcgaa 16350543  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||||||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  16350542 agcaataaaacaatgcatagcactagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctcggtc 16350443  T
Q  201 tgagtactagcca 213  Q
    || |||| |||||    
T  16350442 tgtgtaccagcca 16350430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 14683491 - 14683697
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14683491 atacgagagaagtagtcaccgaacccttagctggagtttcaacgaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 14683590  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  14683591 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcatcctttgtc 14683690  T
Q  201 tgagtac 207  Q
    |||||||    
T  14683691 tgagtac 14683697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 16250938 - 16250718
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16250938 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaggcagaaacacaatcgaa 16250839  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||  | |||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  16250838 agcaataaagcaatgcgtagcattagtatcaataatagcaactaaatgagtattattaatatagcaagtacctcttatcaaacaatcgtcattctctgtc 16250739  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  16250738 tgagtaccagccagagcaaaa 16250718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15144980 - 15144774
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  15144980 atacgagagacgtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaagtagaagcacaatcgaa 15144881  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    | |||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||| ||||||||||||||  ||    
T  15144880 aacaataaaacaatgcttagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctttgatcaagcgatcctcattctcgatc 15144781  T
Q  201 tgagtac 207  Q
    |||||||    
T  15144780 tgagtac 15144774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 16118 - 15917
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||||   || | ||||||| | |||||    
T  16118 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattagacatagtaagacccaacttagtagcacaatcaatagcaa 16019  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||| |||||||||||||| ||||||||||||||||||| || ||| ||| || ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  16018 taaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctcagtctgagt 15919  T
Q  206 ac 207  Q
    ||    
T  15918 ac 15917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 14162399 - 14162600
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||   |||| ||||||| | |||||    
T  14162399 agagaagtagttaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacatagcaagatccaacttagaagcacaatcaagagcaa 14162498  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||| ||||| ||||| ||    
T  14162499 taaaactatgcgtagcaccggtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaggcgatcctcgttctcagtctgggt 14162598  T
Q  206 ac 207  Q
    ||    
T  14162599 ac 14162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 14697030 - 14697223
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  14697030 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattcgacatagcaagacccaacttagaagcacaatcaatagcaa 14697129  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||| ||  ||||| |||||| | |||||||||||||||||||||||    
T  14697130 taaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctataatcaaacgatcctcattctctgt 14697223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 18604797 - 18604687
Alignment:
Q  111 caatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactag 210  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||| ||||||||| ||    
T  18604797 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctaatcaaatgatcctcattctctctctgagtaccag 18604698  T
Q  211 ccagagtaaaa 221  Q
    |||||| ||||    
T  18604697 ccagagcaaaa 18604687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 16219184 - 16219318
Alignment:
Q  73 caagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacc 172  Q
    ||||||||||   |||| ||||||| | |||||||||||| || ||||||||||||||||||||||||||||| || ||| ||| || |||||| |||||    
T  16219184 caagacccaacttagaagcacaatcaatagcaataaaacagtgtgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacatgtacc 16219283  T
Q  173 tctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||||||||| ||||||| |||||    
T  16219284 tctgatcaaacgatcctcattttctgtctaagtac 16219318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 16222504 - 16222638
Alignment:
Q  73 caagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacc 172  Q
    ||||||||||   |||| ||||||| | |||||||||||| || ||||||||||||||||||||||||||||| || ||| ||| || |||||| |||||    
T  16222504 caagacccaacttagaagcacaatcaatagcaataaaacagtgtgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacatgtacc 16222603  T
Q  173 tctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||||||||| ||||||| |||||    
T  16222604 tctgatcaaacgatcctcattttctgtctaagtac 16222638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 51604135 - 51603948
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||| |||||    | || |||| || ||||||    
T  51604135 agagaagtagtcactgaacccttagctggagtttcaacaaccatttctcctttcatatcagacacaatcaa-acccagtttataagcacattctaaagca 51604037  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  51604036 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcatt 51603948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 53750813 - 53750626
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||| |||||    | || |||| || ||||||    
T  53750813 agagaagtagtcactgaacccttagctggagtttcaacaaccatttctcctttcatatcagacacaatcaa-acccagtttataagcacattctaaagca 53750715  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  53750714 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcatt 53750626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 15073288 - 15073460
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||| ||||   |    ||||||| | |||||    
T  15073288 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagatataaccagagccaacttatgtgcacaatcaacagcaa 15073387  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||||||||||   ||||||||||||||||    
T  15073388 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 15073460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 3262137 - 3261965
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  3262137 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 3262038  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  3262037 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 3261965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 29450880 - 29450708
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  29450880 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 29450781  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  29450780 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 29450708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14188430 - 14188511
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaa 82  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||    
T  14188430 atacgagagaagtagtaaccgaacctttagctggagtttcgacaaccatctctccattaatattagacatagcaagacccaa 14188511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 16154711 - 16154896
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||||| | | | ||||||   | |  |||| || | |||||    
T  16154711 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagacacaaccaaacccaacttatatgcacattcaatagcaa 16154810  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| |||| |||||||||||||| |||||| ||||||   ||||||||| |||||| |  |||||||||    
T  16154811 tgaaacaatgagtagcaccagtatctataatagcaactaaaggagtactattaaagaaacaagtacatctgataagtcgatcctca 16154896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 20892960 - 20893132
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  20892960 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 20893058  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  20893059 atgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 20893132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 44659209 - 44659037
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  44659209 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 44659110  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  44659109 taaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 44659037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 16150565 - 16150750
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | | ||||||   | |  |||| || | |||||    
T  16150565 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagaaacaaccaaacccaacttatatgcacattcaatagcaa 16150664  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| |||| |||||||||||||| |||||| ||||||   ||||||||| |||||| |  |||||||||    
T  16150665 tgaaacaatgagtagcaccagtatctataatagcaactaaaggagtactattaaagaaacaagtacatctgataagtcgatcctca 16150750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 11204575 - 11204403
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || |||||| |||| | ||| | ||| ||   | |  |||| || | |||||    
T  11204575 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcataccagatacatccaaacctaacttataggcacattcaatagcaa 11204476  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  11204475 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 11204403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 27903314 - 27903501
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| || ||||| ||||| ||||||||||| | ||||| |||||||   | |  |||| || ||||||    
T  27903314 agagaagtagttactgaacccttggctggagtttcaacgaccatttctcctttcatatcagatataatca-gacccaacttatatgcacattctaaagca 27903412  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||| ||||||||||| |  |||||||||||    
T  27903413 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacatgtacctctgataagtcgatcctcatt 27903501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 7357291 - 7357368
Alignment:
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  7357291 agcaataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 7357368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 14993710 - 14993517
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  14993710 agagaagtagttagtgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaactagacccaacttatatgcacaatcaacagcaa 14993611  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    | ||| ||||   ||||| | |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  14993610 tgaaataatgaagagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 14993517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 15354383 - 15354322
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    ||||||||||| || |||||| ||||||||||||| |||||||| || || |||||||||||    
T  15354383 agagaagtagttactgaacccgtagctggagtttcaacaaccatttcccctttcatatcaga 15354322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 178
Target Start/End: Original strand, 15266736 - 15266877
Alignment:
Q  37 tttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataat 136  Q
    |||| |||||||| ||||| ||||||||||| | | | ||||||||   | || ||||||| | | |||| |||||||| |||| |||| | || |||||    
T  15266736 tttcaacaaccatttctcctttcatatcagatacaaccagacccaacttataagcacaatcaacatcaatgaaacaatgagtagtaccagtgtctataat 15266835  T
Q  137 agcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| ||| |||||| ||||||   ||||| ||||||||||    
T  15266836 agcaattaaaggagtactattaaagaaacaactacctctgat 15266877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10008143 - 10008347
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10008143 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 10008242  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10008243 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 10008342  T
Q  201 tgagt 205  Q
    |||||    
T  10008343 tgagt 10008347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10908753 - 10908957
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10908753 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 10908852  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10908853 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 10908952  T
Q  201 tgagt 205  Q
    |||||    
T  10908953 tgagt 10908957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 12889252 - 12889456
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12889252 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 12889351  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12889352 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 12889451  T
Q  201 tgagt 205  Q
    |||||    
T  12889452 tgagt 12889456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 13255233 - 13255437
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13255233 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 13255332  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13255333 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 13255432  T
Q  201 tgagt 205  Q
    |||||    
T  13255433 tgagt 13255437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15713643 - 15713437
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15713643 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 15713544  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15713543 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 15713444  T
Q  201 tgagtac 207  Q
    |||||||    
T  15713443 tgagtac 15713437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 15345832 - 15345628
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15345832 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 15345733  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15345732 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 15345633  T
Q  201 tgagt 205  Q
    |||||    
T  15345632 tgagt 15345628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 15586979 - 15586775
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15586979 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 15586880  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15586879 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 15586780  T
Q  201 tgagt 205  Q
    |||||    
T  15586779 tgagt 15586775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 43165218 - 43165422
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43165218 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 43165317  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43165318 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 43165417  T
Q  201 tgagt 205  Q
    |||||    
T  43165418 tgagt 43165422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 48427990 - 48428194
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48427990 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 48428089  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48428090 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 48428189  T
Q  201 tgagt 205  Q
    |||||    
T  48428190 tgagt 48428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 16804534 - 16804314
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16804534 atacgagagaagtagtcaccaaacccttagctggagtttcgacaaccatctctccattcatatcaaacaaatcaagacccaaagcagaaacacaatcgaa 16804435  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16804434 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacatctgatcaaacgatcctcattctctgtc 16804335  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| | |||||| ||||    
T  16804334 tgagtaccatccagagcaaaa 16804314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 3688486 - 3688690
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  3688486 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgga 3688585  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3688586 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 3688685  T
Q  201 tgagt 205  Q
    |||||    
T  3688686 tgagt 3688690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16754288 - 16754084
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16754288 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaactcaagacccaaagcagaaacacaatcgaa 16754189  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16754188 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattttctgtc 16754089  T
Q  201 tgagt 205  Q
    |||||    
T  16754088 tgagt 16754084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 20059641 - 20059437
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20059641 atactagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaactcaagacccaaagcagaaacacaatcgaa 20059542  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20059541 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 20059442  T
Q  201 tgagt 205  Q
    |||||    
T  20059441 tgagt 20059437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 53382605 - 53382401
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  53382605 atacgagagaagtagtcaccgaacccttagctggagtttcgacaatcatctctccattcatatcagacaactcaagacccaaagcagaaacacaatcgaa 53382506  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53382505 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 53382406  T
Q  201 tgagt 205  Q
    |||||    
T  53382405 tgagt 53382401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 15358626 - 15358832
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15358626 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 15358725  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||| |||    
T  15358726 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaatgatcctcgttctccgtc 15358825  T
Q  201 tgagtac 207  Q
    || ||||    
T  15358826 tgcgtac 15358832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 26791000 - 26790794
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26791000 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcggaaacacaatcgaa 26790901  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    | ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  26790900 aacaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 26790801  T
Q  201 tgagtac 207  Q
    |||||||    
T  26790800 tgagtac 26790794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16638316 - 16638520
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  16638316 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcaaa 16638415  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16638416 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattttctgtc 16638515  T
Q  201 tgagt 205  Q
    |||||    
T  16638516 tgagt 16638520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16694707 - 16694923
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16694707 atacgagagaagtagtcacagaacccttagctggagtctcgacaaccatctctccattcatatcagacaaatcaagacccaacgcagaaacacaatcgaa 16694806  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  16694807 agcaataaagcaatgcgtagcaccagtatcaataataacaactaagggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgta 16694906  T
Q  201 tgagtactagccagagt 217  Q
    ||||||| |||||||||    
T  16694907 tgagtaccagccagagt 16694923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 15400104 - 15399904
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15400104 atacgagagaagtagtcaccgaaccctaagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 15400005  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  15400004 agcaataaaacaatgcgtagcaccagtatcaataatagcaaccaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctccgtc 15399905  T
Q  201 t 201  Q
    |    
T  15399904 t 15399904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 6603278 - 6603479
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6603278 atacgagagaagtagtcaccgaacccttagctggagttttgacaaccatctctccattcatatcagacaactcaagacccaaagcagaaacacaatcgaa 6603377  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  6603378 agcaataaagcaatgggtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctttgtc 6603477  T
Q  201 tg 202  Q
    ||    
T  6603478 tg 6603479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 5422517 - 5422313
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5422517 atacgagagaagtagtcaccgaacccttagtcggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacgcaatcgaa 5422418  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||| ||||||||    
T  5422417 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctttgatcaaacgatcgtcactctctgtc 5422318  T
Q  201 tgagt 205  Q
    |||||    
T  5422317 tgagt 5422313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24185733 - 24185939
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24185733 atacgagagaagtagtcaccaaacccttagctggagtttcaacgaccatctctccattcatatcagacaaatcaagacccaaagtagaaacacaatcgaa 24185832  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24185833 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcatcctctgtc 24185932  T
Q  201 tgagtac 207  Q
    |||||||    
T  24185933 tgagtac 24185939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 14874155 - 14873949
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||    
T  14874155 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattagacatatcaagacccaaagtagaagcacaatcgaa 14874056  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||| |||    
T  14874055 agcaataaaacaatgtgttgcaccaatatcaataatagcaactaaaggagtattattaatataacatgtacctatgatcaagcgatcctcattctcggtc 14873956  T
Q  201 tgagtac 207  Q
    |||||||    
T  14873955 tgagtac 14873949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 15065616 - 15065820
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  15065616 acgagagaagtagtcaccgaacccttagctggagattcgacaaccatctctccattcatatcagacaaaacaagacccaaagaagaagcacaatcgaaag 15065715  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||    
T  15065716 caataaaacaatgcgtagcaccagtatcaataatagcaactaaatgagtattattaatatagcaagtacctttgatcaagcgatcctcattctcggtctg 15065815  T
Q  203 agtac 207  Q
    |||||    
T  15065816 agtac 15065820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 15262178 - 15262379
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  15262178 agagaagtagtcaccgaaccattagctggagtttcgacaaccatctctccattcatatttgacatagcaagacccaacttagaagcacaatcaatagcaa 15262277  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| ||||||||||||||||||||||| ||||||||||||||    
T  15262278 taaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaaacgatcctcgttctctgtctgagt 15262377  T
Q  206 ac 207  Q
    ||    
T  15262378 ac 15262379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 12843685 - 12843484
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||  |||| | ||||| ||||   |||| ||||||| | |||||    
T  12843685 agagaagtagtcactgaaccattagctggagtttcaacaatcatctctccattcatatttgacatagcaagatccaacttagaagcacaatcaatagcaa 12843586  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| ||  || ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  12843585 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggtatactatcaaaataacaagtacctctgatcaaacgatcctcattctctgtctgagt 12843486  T
Q  206 ac 207  Q
    ||    
T  12843485 ac 12843484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 14578988 - 14578789
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||    |||||||||   |||| ||||||| | |||||||    
T  14578988 agaagtagttactgaacccttagctggagtttcgacaaccatctctccattcatatttgacatgggaagacccaacttagaagcacaatcaatagcaata 14578889  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||| ||||||| |  ||||||||||| |||||| || ||||||| |||| |||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  14578888 aaacaatgtgtagcactaggatcaataatagtaactaaaggtgtattatcaataaaacatgtagctctgatcaaatgatcctcattctcagtctgagtac 14578789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 207
Target Start/End: Complemental strand, 23079525 - 23079398
Alignment:
Q  80 caaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatc 179  Q
    |||||||||| ||||||||||||||||||||||||| || |||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  23079525 caaagcagaagcacaatcgaaagcaataaaacaatgtgttgcacaagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatc 23079426  T
Q  180 aaacgatcctcattctctgtctgagtac 207  Q
    || ||||||||||| || ||||||||||    
T  23079425 aagcgatcctcattttcggtctgagtac 23079398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 11861032 - 11861123
Alignment:
Q  116 cgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  11861032 cgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctctgtctgtgtac 11861123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15013345 - 15013139
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||||||   |||| | ||||||||||   || | |||||||       
T  15013345 atactagagaagtagtcaccgaacccttagctggggtttcgacaaccatttccccattcatagacgacataacaagacccaacttagtagcacaatcagc 15013246  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    | |||||||| |||| ||| ||| | |||| ||||||| || ||| |||||  |||||||  |||| ||||||||||| | ||||||||||||| |||||    
T  15013245 aacaataaaaaaatgtgtaacactagtatctataatagtaattaaaggagtgctattaatgaaacatgtacctctgattagacgatcctcattcgctgtc 15013146  T
Q  201 tgagtac 207  Q
    |||||||    
T  15013145 tgagtac 15013139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 8744961 - 8744774
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||| ||||||   | |  |||  || ||||||    
T  8744961 agagaagtagtcactgaacccttagctggagtttcaacaaccatttctcctttcatatcagacacaatcaa-acccaacctatatgcactttctaaagca 8744863  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  8744862 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcatt 8744774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 13944582 - 13944769
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| | ||||||||||| |||||| |||||    | || |||| || ||||||    
T  13944582 agagaagtagtcactgaacccttagctggagtttcaacaaccatttctccttccatatcagacacaatcaa-acccagtttataagcacattctaaagca 13944680  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  13944681 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgatgagacggtcctcatt 13944769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 47126502 - 47126674
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  47126502 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatatatccaaacccaacttataagcacattcaatagcaa 47126601  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  47126602 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 47126674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 31692756 - 31692571
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || ||||||||||||| |||||| |||||||| ||||| ||||||||||| | | | |||||| |   | || |||| || | |||||    
T  31692756 agagaagtagttactgaacccttagctgaagtttcaacaaccatttctcctttcatatcagatacaaccagacccgacttataagcacattcaatagcaa 31692657  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| |||||||||||||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  31692656 tgaaacaatgagtagcaccaatatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 31692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 10408526 - 10408698
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  10408526 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 10408625  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  10408626 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 10408698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 178
Target Start/End: Original strand, 17188929 - 17189104
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaa 101  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||||||||| | |||||| ||||||   | |  |||| || |||    
T  17188929 acgagagaagtagtcactgaacccttagctggagtttcaacaaccatctctccctccatatcagatacaatcaa-acccaatttatatgcacattctaaa 17189027  T
Q  102 gcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| |||||||| ||||||||  | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  17189028 gcaatgaaacaatgagtagcacccgtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 17189104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 17492399 - 17492475
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaa 82  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  17492399 agagaagtagtcaccgaactcttcgctggagtttcgacaaccatctctccattcatatcagacataacaagacccaa 17492475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 178
Target Start/End: Original strand, 24189859 - 24190034
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaa 101  Q
    |||||| |||||||||| ||||||||||||||||| || |||||||||||||| ||||||||||| | |||||| ||||||   | |  |||| || |||    
T  24189859 acgagaaaagtagtcactgaacccttagctggagtctcaacaaccatctctcccttcatatcagatacaatcaa-acccaatttatatgcacattctaaa 24189957  T
Q  102 gcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  24189958 gcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 24190034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 28756877 - 28757049
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  28756877 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 28756976  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  28756977 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 28757049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 10417616 - 10417429
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| ||||| ||||||||||| | |||| ||||||||   | |  |||| || ||||||    
T  10417616 agagaagtagtcactgaacccttggctggagtttcaacaaccatttctcctttcatatcagatacaatc-agacccaacttatatgcacactctaaagca 10417518  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||  | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||||    
T  10417517 atgaaacaatgtgtagcaccggtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatt 10417429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 11949492 - 11949324
Alignment:
Q  10 aagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaa 109  Q
    ||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | ||||||||   | || |||| || | |||||| ||    
T  11949492 aagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaacttataaccacattcaatagcaatgaa 11949393  T
Q  110 acaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  11949392 acaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 11949324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 12180902 - 12181074
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || ||||||||||||||||| || |||||||| ||||| ||||||| ||| | |   ||||||||   | || |||| || | |||||    
T  12180902 agagaagtagttactgaacccttagctggagtgtcaacaaccatttctcctttcatattagatacaaacagacccaacttataagcacattcaatagcaa 12181001  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| | || |||||||||||||| |||||| ||||||   ||||||||||||||||    
T  12181002 tgaaacaatgagtagcaccagtgtctataatagcaactaaaggagtactattaaagaaacaagtacctctgat 12181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 12510034 - 12509882
Alignment:
Q  26 cttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcacca 125  Q
    ||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | ||||||||||||||| |||||||||    
T  12510034 cttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaataaaacaatgagtagcacca 12509935  T
Q  126 atatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
     ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  12509934 gtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 12509882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 14291103 - 14290931
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  14291103 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatataaccagacccaacttatatgcacaatcaacagcaa 14291004  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||| | | || |||||||||| |||  ||||| ||||||   ||||||||||||||||    
T  14291003 tgaaacaatgagtagcactagtgtctataatagcaattaaatgagtactattaaagaaacaagtacctctgat 14290931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 16832099 - 16831912
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||| | ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  16832099 agagaagtagttactgaacccttagctggagtttcaacaaccatttcttctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 16832001  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  16832000 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcatt 16831912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 16327280 - 16327111
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||| ||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  16327280 agagaagtagttactgaacccttagttggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 16327182  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    || |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||    
T  16327181 atgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctct 16327111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 11958752 - 11958580
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  11958752 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 11958654  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| | || |||||||||| ||| ||| || ||||||   ||||||||||||||||    
T  11958653 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgat 11958580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 12358098 - 12357913
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| | ||| ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  12358098 agagaagtagttactgaacccttagctggagtttcaacaaccatttttcctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 12357999  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||| | | || |||||||||| ||| || ||| ||||||   |||||||||||||||| |  |||||||||    
T  12357998 tgaaacaatgagtagcactagtgtctataatagcaattaaaggtgtactattaaagaaacaagtacctctgataagtcgatcctca 12357913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 13318086 - 13317918
Alignment:
Q  25 ccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcac 123  Q
    |||||||||||||||| |||||||| ||||| ||||||||||| | ||||||| |||||   | |  |||| || |||||||| |||||||| |||||||    
T  13318086 ccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaag-cccaacttatatgcacattctaaagcaatgaaacaatgagtagcac 13317988  T
Q  124 caatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  13317987 cagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcatt 13317918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 17494204 - 17494377
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagttt-cgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||| |||| || ||||||||||||||||||| | |||||||| ||||| ||||||||||| | | | ||||||||   | || |||| || | ||||    
T  17494204 agagaattagttactgaacccttagctggagttttcaacaaccatttctcctttcatatcagatacaaccagacccaatttataagcacattcaatagca 17494303  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  17494304 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 17494377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 31941461 - 31941646
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||   |||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  31941461 agagaagtagttactagacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 31941560  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | ||| |||| |||||| || |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  31941561 tgaaaaaatgagtagcatcagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 31941646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 12858066 - 12857894
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||| | ||||||||||||||||| | | | ||| ||||   | |  ||||| | | |||||    
T  12858066 agagaagtagttactgaacccttagctggagtttcaacaaccgtttctccattcatatcagatataaccagaaccaacttatatgcacaaaccacagcaa 12857967  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||   |||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  12857966 tgaaacaataactagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 12857894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 16825852 - 16825678
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| | ||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  16825852 agagaagtagttactgaacccttagctggagtttcaacaaccatttatcctttcatatcagatacaaccagacccaacttatatgcacaatcaacagcaa 16825753  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagta--ttattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||| | |||| |||||||||| ||| ||||||   ||||||   ||||||||||||||||    
T  16825752 tgaaacaatgagtagcactagtatctataatagcaattaaaggagtactatattaaagaaacaagtacctctgat 16825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 18131917 - 18131733
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||| | || || ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  18131917 agagaagtagttactgaacccttagctggagtttcaacaaccgtttcccctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 18131818  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| |||||||| |  || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  18131817 tgaaacaatgagtagcacc-aggtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 18131733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 16378505 - 16378318
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| || |||||||| | |||||| ||||||   | |  |||  || ||||||    
T  16378505 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttaatatcagatacaatcaa-acccaacttatatgcactttctaaagca 16378407  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || || ||||||| ||| |||||| ||||||   |||||| ||||||||| | ||| ||||||||    
T  16378406 atgaaacaatgagtagcaccagtgtctatgatagcaattaaaggagtactattaaagaaacaagcacctctgataagacggtcctcatt 16378318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 12272896 - 12273047
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  || | || | | |||    
T  12272896 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttaaatgcatagtcaacaacaa 12272995  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattatt 157  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||    
T  12272996 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactatt 12273047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 14575544 - 14575605
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| |||||||||||    
T  14575544 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcaga 14575605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 15230161 - 15230333
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| |||||| |||||   |||| | | ||||||||   | |  || |||| | |||||    
T  15230161 agagaagtagttaatgaacccttagctggagtttcaacaaccatttctccactcatacttgacataaccagacccaacttatatgcaaaatcaacagcaa 15230260  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  15230261 tgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctatgat 15230333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 15236029 - 15236201
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| |||||| |||||   |||| | | ||||||||   | |  || |||| | |||||    
T  15236029 agagaagtagttaatgaacccttagctggagtttcaacaaccatttctccactcatacttgacataaccagacccaacttatatgcaaaatcaacagcaa 15236128  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  15236129 tgaaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctatgat 15236201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 19727433 - 19727509
Alignment:
Q  131 aataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||  || ||| ||| || |||||| |||||||| |||||||||||||||||||||||||| ||||    
T  19727433 aataatagcaactataggtgtactatcaaaataacatgtacctctaatcaaacgatcctcattctctgtctgcgtac 19727509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22323230 - 22323026
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22323230 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 22323131  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22323130 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 22323031  T
Q  201 tgagt 205  Q
    |||||    
T  22323030 tgagt 22323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 24712589 - 24712793
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24712589 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 24712688  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24712689 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 24712788  T
Q  201 tgagt 205  Q
    |||||    
T  24712789 tgagt 24712793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 9338137 - 9338341
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9338137 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 9338236  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9338237 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 9338336  T
Q  201 tgagt 205  Q
    |||||    
T  9338337 tgagt 9338341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 9486771 - 9486975
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9486771 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 9486870  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9486871 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 9486970  T
Q  201 tgagt 205  Q
    |||||    
T  9486971 tgagt 9486975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10871405 - 10871609
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10871405 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 10871504  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10871505 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 10871604  T
Q  201 tgagt 205  Q
    |||||    
T  10871605 tgagt 10871609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16983795 - 16983999
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16983795 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 16983894  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16983895 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 16983994  T
Q  201 tgagt 205  Q
    |||||    
T  16983995 tgagt 16983999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 17001555 - 17001759
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17001555 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagataaatcaagacccaaagcagaaacacaatcgaa 17001654  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17001655 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 17001754  T
Q  201 tgagt 205  Q
    |||||    
T  17001755 tgagt 17001759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 24657546 - 24657326
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24657546 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagatccaaagtagaaacacaatcgaa 24657447  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24657446 agcaataaaacaatgcgtagcagctgtatcaataatagcaactaatggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 24657347  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  24657346 tgagtaccagccagagcaaaa 24657326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27373824 - 27374028
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27373824 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 27373923  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  27373924 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacatctgatcaaacgatcctcattctctgtc 27374023  T
Q  201 tgagt 205  Q
    |||||    
T  27374024 tgagt 27374028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 44383458 - 44383254
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44383458 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaaacagaaacacaatcgaa 44383359  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44383358 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 44383259  T
Q  201 tgagt 205  Q
    |||||    
T  44383258 tgagt 44383254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24264925 - 24265131
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  24264925 atacgagagaagtagtcaccgaacccttagccggagtttcgacaaccatctatccactcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 24265024  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  24265025 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtc 24265124  T
Q  201 tgagtac 207  Q
    |||||||    
T  24265125 tgagtac 24265131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24705370 - 24705164
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  24705370 atacgagagaagtagttaccaaacccttagctggagtttcgacaaccatctctgcattcatatcagacaaatcaagacccaaagtagaaacacaatcgaa 24705271  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24705270 agcaataaaacaatgcgtagcaccagtatcaataatatcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctctgtc 24705171  T
Q  201 tgagtac 207  Q
    |||||||    
T  24705170 tgagtac 24705164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 11351599 - 11351379
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||    
T  11351599 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacatatctagacccaaagtagaagcacaatcgaa 11351500  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11351499 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaatgagtattattaatatagcaagtacctctgatcaagcgatcctcattctctgtc 11351400  T
Q  201 tgagtactagccagagtaaaa 221  Q
    || |||| |||||||| ||||    
T  11351399 tgtgtaccagccagagcaaaa 11351379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24874638 - 24874432
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24874638 atacgagagaagtagtcaccgaaaccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 24874539  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||    
T  24874538 agcaataaagcaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctccgtc 24874439  T
Q  201 tgagtac 207  Q
    |||||||    
T  24874438 tgagtac 24874432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23204869 - 23205089
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  23204869 atacgagagaagtagtcaccgaacccttagctggagtatcgacaaccatctctccattcatatcagacacatcaagacccaaagcagaaacacaatggaa 23204968  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||| ||  ||||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  23204969 agcaaaaatgcaatgcgtagcactagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaatgatcctcattctctgtc 23205068  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  23205069 tgagtaccagccagagcaaaa 23205089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 45673900 - 45673707
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  45673900 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaatcacaatcgaa 45673801  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattc 194  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  45673800 agcaataaaacaatgcgtagctccattatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaatcgatcctcattc 45673707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 27220571 - 27220754
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27220571 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 27220670  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacg 184  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||    
T  27220671 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctcttatcnaacg 27220754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22742854 - 22742648
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  22742854 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaagtagaagcacaatcgaa 22742755  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||| |||    
T  22742754 agcaataaaacaatgcgtagcaccagtaccaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaagcgatcctcattctcggtc 22742655  T
Q  201 tgagtac 207  Q
    |||||||    
T  22742654 tgagtac 22742648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 23029349 - 23029155
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23029349 atacgagagaagtagtcaccgaacccttagctggattttcgacaaccatcactccattcatatcagacaaaacaagacccaaagcagaagcacaatcgaa 23029250  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattct 195  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||||||||    
T  23029249 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaagggagtattattaatataagatgtacctctgatcaagcgatcctcattct 23029155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 21323154 - 21322948
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||| ||||||||||    
T  21323154 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccaatcatatcagacataacaagacccaaagtagaagcacaatcgaa 21323055  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||| |  |||||||||||||| |||    
T  21323054 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgattaggcgatcctcattctcggtc 21322955  T
Q  201 tgagtac 207  Q
    |||||||    
T  21322954 tgagtac 21322948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24678042 - 24678248
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||    
T  24678042 atacgagagaagtagtcaccgaacccttagctgaagtttcgacaaccatctctccattcatatcagacatatctagacccaaagtagaagcacaatcgaa 24678141  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||    
T  24678142 agcaataaaacaatgcctagcaccagtatcattaatagcaactaaaggagtattattcatatagcaagtacctctgatcaagcgatcctcattctctgtc 24678241  T
Q  201 tgagtac 207  Q
    || ||||    
T  24678242 tgtgtac 24678248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 21142929 - 21142761
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21142929 atacgagagaagtagtcatcgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaaacagaaacacaatcgaa 21142830  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagt 169  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  21142829 agcaataaagcaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagt 21142761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 23064973 - 23065174
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||   |  | ||||||| |||||||    
T  23064973 agagaagtagtcaccgaacccttagctggagtttcgataaccatctctccattcatatcagacatagcaagacccaacttaatagcacaatcaaaagcaa 23065072  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||||| |||||||||||||||||||||||| |||||||| ||||||||||| ||    
T  23065073 taaaacaatgcgtagcaccagtatcaataatagcaactaaatgtgtattatcaatataacaagtacctctgatcaagcgatcctcgttctctgtctgtgt 23065172  T
Q  206 ac 207  Q
    ||    
T  23065173 ac 23065174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 23074423 - 23074624
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||   |  | ||||||| |||||||    
T  23074423 agagaagtagtcaccgaacccttagctggagtttcgataaccatctctccattcatatcagacatagcaagacccaacttaatagcacaatcaaaagcaa 23074522  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| |||||||||||||||||||  | ||||||| |||||||||||||||||||||||| |||||||| ||||||||||| ||    
T  23074523 taaaacaatgcgtagcaccagtatcaataatagcaactaaatgtgtattatcaatataacaagtacctctgatcaagcgatcctcgttctctgtctgtgt 23074622  T
Q  206 ac 207  Q
    ||    
T  23074623 ac 23074624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 6 - 201
Target Start/End: Complemental strand, 22733657 - 22733462
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||   ||||||||||   || | ||||||| |||||||    
T  22733657 agagaagtagtcaccgaacccttagttggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcaaaagcaa 22733558  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtct 201  Q
    |||| ||| ||||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  22733557 taaatcaacgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgatcaagcgatcctcgttctctgtct 22733462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 23105611 - 23105410
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||| ||    
T  23105611 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagaaa 23105512  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| || |||||||||||||||| || ||||||| |||||| |||||||||||| ||||||||||||| ||||| ||||| ||    
T  23105511 taaaacaatgcgtagcaccagtaacaataatagcaactaaaggtgtattatcaatatagcaagtacctctggtcaaacgatcctcgttctcagtctgtgt 23105412  T
Q  206 ac 207  Q
    ||    
T  23105411 ac 23105410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 24817723 - 24817522
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||    |||||||||   |||| ||||||| | |||||    
T  24817723 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatattcgacattgtaagacccaacttagaagcacaatcaagagcaa 24817624  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||| | | || || ||| |||||||| ||||| ||||||||||||||| |||| ||    
T  24817623 taaaacaatgcgtagcaccagtatcaataatatcaactaaaggagtactttcaaaatgacatgtacctctaatcaatcgatcctcattctctatctgtgt 24817524  T
Q  206 ac 207  Q
    ||    
T  24817523 ac 24817522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 23676583 - 23676693
Alignment:
Q  111 caatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactag 210  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||    
T  23676583 caatgcgtagcactagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaatgatcctcattctctgtctgagtaccag 23676682  T
Q  211 ccagagtaaaa 221  Q
    |||||| ||||    
T  23676683 ccagagcaaaa 23676693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 207
Target Start/End: Complemental strand, 30208796 - 30208602
Alignment:
Q  13 tagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaaca 112  Q
    |||||||||||||||| || || |||||||||||||| || || ||||||   |||| | ||||||||||    |||||||||||   ||||||||||||    
T  30208796 tagtcaccgaaccctttgccggggtttcgacaaccatttcccctttcatagacgacataacaagacccaatttcgaaacacaatcagcagcaataaaaca 30208697  T
Q  113 atgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||| ||||||||| |||| ||||||| || ||| |||||| |||||||  |||| |||||| |||||| | ||||||||||| ||||||||||||    
T  30208696 atgtgtagcaccagtatctataatagtaattaagggagtactattaatgaaacatgtacctttgatcagatgatcctcattcactgtctgagtac 30208602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 41606274 - 41606156
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | || |||| |||||||||||||| ||||||    
T  41606274 atacgagagaagtagtcaccgaacccttagccggagtttcgac-accatctctccattcatatcagac-actc-agacacaaagcagaaacac-atcgaa 41606179  T
Q  101 agcaataaaacaatgcgtagcacca 125  Q
    ||| ||||| | |||||||||||||    
T  41606178 agc-ataaagc-atgcgtagcacca 41606156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 20848149 - 20848321
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  20848149 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 20848248  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  20848249 taaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 20848321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 19817402 - 19817608
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| |||||||||||||||||||||||||| ||  ||| ||||||||| |  |||||| ||   |||| | ||||||| ||    |||||||||||       
T  19817402 atactagagaagtagtcaccgaacccttagccgggtttttgacaaccatttgcccattcgtagatgacataacaagacctaatttcgaaacacaatccgc 19817501  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||  || ||| || ||| |||||| |||||||  |||| ||||||||||||| |||||||||||||  ||||    
T  19817502 agcaataaagcaatgtgtagcaccagtatctgtagtagtaattaagggagtactattaatgaaacatgtacctctgatcagacgatcctcattcgatgtc 19817601  T
Q  201 tgagtac 207  Q
    |||||||    
T  19817602 tgagtac 19817608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 12576913 - 12577085
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||  |||||||||||||||||||| |||||||| ||||| ||||||||||||| |||||| |||||    | |  |||| || ||||||    
T  12576913 agagaagtagtcattgaacccttagctggagtttcaacaaccatttctcctttcatatcagacacaatcaa-acccagtttataggcacattctaaagca 12577011  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| | || |||||||||| ||| ||| || ||||||   ||||||||||||||||    
T  12577012 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggaatactattaaagaaacaagtacctctgat 12577085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 23274153 - 23274338
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  23274153 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 23274252  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||  | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  23274253 tgaaacaatgagtagcaccggtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 23274338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 19716900 - 19716728
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| |||| |||||| | | | | ||||||   | || |||| || | |||||    
T  19716900 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcaaatcagatacaactaaacccaacttataagcacattcaatagcaa 19716801  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  19716800 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgat 19716728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 178
Target Start/End: Original strand, 23113280 - 23113455
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    |||||||||||||| || |||||||||| ||||||||| |||||||| |||||| |||||   |||| | | ||||||||   | |  ||||||| | |     
T  23113280 acgagagaagtagttactgaacccttagttggagtttcaacaaccatttctccactcatacttgacataaccagacccaatttatatgcacaatcaacaa 23113379  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  23113380 caatgaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctttgat 23113455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 23097901 - 23097748
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||| ||||| ||||  | | | ||||||||   | |  |||| || |||||||    
T  23097901 agagaagtagttactgaacccttagctggagtttcaacaaccatctctcctttcatgtcagttacaaccagacccaacttaaatgcacattctaaagcaa 23097802  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaa 159  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||    
T  23097801 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaa 23097748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 22463204 - 22463149
Alignment:
Q  166 aagtacctctgatcaaacgatcctcattctctgtctgagtactagccagagtaaaa 221  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  22463204 aagtacctctgatcaaacgatcctcattctctgtctgagtaccagccagagcaaaa 22463149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 211
Target Start/End: Original strand, 19647611 - 19647654
Alignment:
Q  168 gtacctctgatcaaacgatcctcattctctgtctgagtactagc 211  Q
    ||||||||||||| |||||||||||||  |||||||||||||||    
T  19647611 gtacctctgatcagacgatcctcattcgatgtctgagtactagc 19647654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 19721361 - 19721291
Alignment:
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  19721361 aaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgat 19721291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 21139705 - 21139663
Alignment:
Q  165 caagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||    
T  21139705 caagtacctctgatcaagcgatcctcgttctccgtctgagtac 21139663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13475 - 13255
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  13475 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctcttcattcatatcagacaaatcaagacccaaaccagaaacacaatcgaa 13376  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13375 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 13276  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  13275 tgagtaccagccagagcaaaa 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 41108 - 41314
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  41108 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacataatccaa 41207  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||| ||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||    
T  41208 agcaataaagcaatgcgtagccccagtgtcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctccgtc 41307  T
Q  201 tgagtac 207  Q
    |||||||    
T  41308 tgagtac 41314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 22200 - 22404
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22200 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 22299  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22300 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 22399  T
Q  201 tgagt 205  Q
    |||||    
T  22400 tgagt 22404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 7189 - 7393
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7189 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 7288  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7289 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 7388  T
Q  201 tgagt 205  Q
    |||||    
T  7389 tgagt 7393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16348015 - 16347811
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16348015 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 16347916  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16347915 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 16347816  T
Q  201 tgagt 205  Q
    |||||    
T  16347815 tgagt 16347811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 51330912 - 51330708
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51330912 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 51330813  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51330812 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 51330713  T
Q  201 tgagt 205  Q
    |||||    
T  51330712 tgagt 51330708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 21833243 - 21833445
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21833243 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 21833342  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    | ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21833343 ccataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtctg 21833442  T
Q  203 agt 205  Q
    |||    
T  21833443 agt 21833445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 17042435 - 17042229
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17042435 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaaggcccaaagcagaaacacaatcgaa 17042336  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17042335 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaaacgatcctcagtctctgtc 17042236  T
Q  201 tgagtac 207  Q
    |||||||    
T  17042235 tgagtac 17042229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21842151 - 21842357
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  21842151 atacgagagaagtagtcaccgaacccttagctggagtttcgacaacaatctctccattcatatcagacaaatcaagacctaaagcagaaacacaatcaaa 21842250  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  21842251 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctctgtc 21842350  T
Q  201 tgagtac 207  Q
    || ||||    
T  21842351 tgcgtac 21842357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33388449 - 33388245
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33388449 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaaacacaatcgaa 33388350  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagta-cctctgatcaaacgatcctcattctctgt 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  33388349 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtaccctctgatc-aacgatcctcattctctgt 33388251  T
Q  200 ctgagt 205  Q
    ||||||    
T  33388250 ctgagt 33388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 41351088 - 41350884
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  41351088 atacgagagaagtaagcaccgaacccttagctggagtttcgacaaccatctctccgttcatatcagacaactcaagacccaaagcagaaacacaatcgaa 41350989  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41350988 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 41350889  T
Q  201 tgagt 205  Q
    |||||    
T  41350888 tgagt 41350884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22496676 - 22496470
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |||| ||||||||||    
T  22496676 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaatgtagaagcacaatcgaa 22496577  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||| |||    
T  22496576 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaagcgatcctcattctcggtc 22496477  T
Q  201 tgagtac 207  Q
    |||||||    
T  22496476 tgagtac 22496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24785277 - 24785071
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  24785277 atacgagagaagtagtcaccgaacccttagctggaatttcaacgaccatctctccattcatatcagataaaacaagacccaaagcagaagcacaatcgaa 24785178  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24785177 agcaataaaacaatgtgtagcacaagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 24785078  T
Q  201 tgagtac 207  Q
    |||||||    
T  24785077 tgagtac 24785071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 20081796 - 20081587
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  20081796 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaagtagaagcacaatcgaa 20081697  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||  ||||||| |||||| |||    
T  20081696 agcaataaaacaatgcgtagtaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaggcgatccttattctcggtc 20081597  T
Q  201 tgagtactag 210  Q
    ||||||||||    
T  20081596 tgagtactag 20081587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 19109307 - 19109513
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||  |    
T  19109307 atactagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagactcaaagcagaagcacaatcata 19109406  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
     ||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  19109407 ggcaataaaacaatgcatagcaccagtgtcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctctgtc 19109506  T
Q  201 tgagtac 207  Q
    |||||||    
T  19109507 tgagtac 19109513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 30 - 213
Target Start/End: Complemental strand, 21228947 - 21228764
Alignment:
Q  30 gctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||    
T  21228947 gctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaaccagaaacacaatcgaaagcaataaagcaatgcgtagcaccagtat 21228848  T
Q  130 caataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagcca 213  Q
    |||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  21228847 caataatagcaactaaaggagtaatattaatatagcaagtacctctgatcaaacgatcctcattctccgtctgagtaccagcca 21228764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 210
Target Start/End: Original strand, 21751991 - 21752195
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||   || | ||||||| | |||||    
T  21751991 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctcttcattcatattagacatagcaagacccaacttagtagcacaatcaatagcaa 21752090  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| ||| || |||||||||||||||||||||  ||||||| ||||| ||||||||    
T  21752091 taaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagtgatcctcgttctcagtctgagt 21752190  T
Q  206 actag 210  Q
    |||||    
T  21752191 actag 21752195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 16379038 - 16379231
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | || |||||||   |||| ||||||| | |||||    
T  16379038 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatttgacatagcatgacccaacttagaagcacaatcaatagcaa 16379137  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||  || ||  ||||| ||||||||||||||||||||||| ||||||||    
T  16379138 taaaacaatgcgtagcaccaatatcaataatagcaattaaaggagtaccatcaaagtaacatgtacctctgatcaaacgatcctcgttctctgt 16379231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 22401621 - 22401737
Alignment:
Q  91 cacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctc 190  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||| |||||||||| ||||||||    
T  22401621 cacaatcttaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtatctctgatcaagcgatcctc 22401720  T
Q  191 attctctgtctgagtac 207  Q
     ||||||||||| ||||    
T  22401721 gttctctgtctgtgtac 22401737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 22436027 - 22435933
Alignment:
Q  127 tatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagccagagtaaaa 221  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||| ||||    
T  22436027 tatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctctgtctctgtaccagccagagcaaaa 22435933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 20075124 - 20074952
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  20075124 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataggcacattcaatagcaa 20075025  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  20075024 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 20074952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 20297356 - 20297528
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  20297356 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataagcacattcaatagcaa 20297455  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||| ||||||||||||    
T  20297456 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaaccagtacctctgat 20297528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 21739447 - 21739279
Alignment:
Q  10 aagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaa 109  Q
    ||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| ||| ||||||||||   | |  ||||||| | |||||| ||    
T  21739447 aagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagataaaacaagacccaacttatatgcacaatcaacagcaatgaa 21739348  T
Q  110 acaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||| ||||||||| |||| ||||||| || ||| |||||| ||||||   ||||||||||||||||    
T  21739347 acaatgagtagcaccagtatctataatagaaattaaaggagtactattaaagaaacaagtacctctgat 21739279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 31537412 - 31537240
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||||| ||| | ||||||   | |  |||| || | |||||    
T  31537412 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagacacatccaaacccaacttatatgcacattcaatagcaa 31537313  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  31537312 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 31537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 52988716 - 52988888
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  52988716 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataagcacattcaatagcaa 52988815  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  52988816 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 52988888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 48425848 - 48426020
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  48425848 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 48425947  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  48425948 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 48426020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 24097030 - 24096858
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||| | || |||||||||||||||||||| |||||||| ||||| ||||||| ||| | ||| | ||||||   | || |||| || | |||||    
T  24097030 agagaagtaattactgaacccttagctggagtttcaacaaccatttctcctttcatattagatacatccaaacccaacttataagcacattcaatagcaa 24096931  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||| | |||| |||||||||| ||| |||||||||||||   ||||||||||||||||    
T  24096930 tgaaacaatgagtagcactagtatctataatagcaattaaaggagtattattaaagaaacaagtacctctgat 24096858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 37680024 - 37680196
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  37680024 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatatatccaaacccaacttatatgcacattcaatagcaa 37680123  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||||||||  |||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  37680124 taaaacaatgaatagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 37680196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 38910241 - 38910069
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| |  || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  38910241 agagaagtggttactgaacccttagctggagtttcaacaaccattttccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 38910142  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  38910141 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 38910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 21742967 - 21742774
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||| ||||||||   | |  ||||||| | | ||    
T  21742967 agagacgtagttaccgaacccttagctggagtttcaacaaccatttctccattcatatcagatacaatc-agacccaacttatatgcacaatcaacaaca 21742869  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    || |||||||| ||||||||| | || |||||||||| |||  ||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  21742868 atgaaacaatgagtagcaccagtgtctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 21742774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 22016160 - 22015967
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | | |||    
T  22016160 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttatatgcacaatcaacatcaa 22016061  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    | |||||||| ||| ||||| |||| |||||||||| |||  ||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  22016060 tgaaacaatgagtatcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 22015967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 19857249 - 19857418
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | | ||||||   | || |||| || | | |||    
T  19857249 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccatacccaacttataagcacattcaataacaa 19857348  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    | |||||||| ||||||||| |||| |||||||||  ||| |||||| ||||||   |||||||||||||    
T  19857349 tgaaacaatgagtagcaccagtatctataatagcagttaaaggagtactattaaagaaacaagtacctct 19857418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 20854175 - 20854003
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| || || ||||||||||| | |   || |||||   | |  |||| || |||||||    
T  20854175 agagaagtagttactgaacccttggctggagtttcaacaaccatttcccctttcatatcagatacaattaggcccaacttatatgcacattctaaagcaa 20854076  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||||||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  20854075 tgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 20854003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 22400397 - 22400465
Alignment:
Q  139 caactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||    
T  22400397 caactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctccgtctgagtac 22400465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 21176531 - 21176582
Alignment:
Q  165 caagtacctctgatcaaacgatcctcattctctgtctgagtactagccagag 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21176531 caagtacctctgatcaaacgatcctcattctctgtctgagtaccagccagag 21176582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 18710360 - 18710545
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || ||  |||||||||| | | | |||| |||   | || |||| || | |||||    
T  18710360 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctctcatatcagatacaaccagacgcaacttataagcacattcaatagcaa 18710459  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | |  |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  18710460 tgaaacaatgagtagcaccagtgtttataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 18710545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 21045428 - 21045346
Alignment:
Q  117 gtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    ||||||||| ||||||||||||||| ||| |||||| ||| ||  ||||| |||||| | |||||||||||||||||||||||    
T  21045428 gtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctataatcaaacgatcctcattctctgt 21045346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 20833315 - 20833130
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  ||||||||| |||||||||| |||||||| || || ||||||||||| | | | ||||||||   | ||  ||| || | | |||    
T  20833315 agagaagtagttaatgaacccttatctggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaacttataagaacattcaataacaa 20833216  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | || |||||||||| ||| ||| || ||||||   |||||||||||||||| |  |||||||||    
T  20833215 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggaataatattaaagaaacaagtacctctgataagtcgatcctca 20833130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 12200493 - 12200554
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || |||||||||||    
T  12200493 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcaga 12200554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1120 - 900
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1120 atacgagagaagtagtcaccgaacccttagctagagtttcgacaaccatctctccattcatgtcagacaaatcaagacccaaagcagaaacacaatcgaa 1021  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1020 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 921  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| | |||||| ||||    
T  920 tgagtaccatccagagcaaaa 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29279 - 29059
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  29279 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagataaatcaagacccaaagtagaaacacaatcgaa 29180  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  29179 agcaataaatcaatgcgtagcaccattatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaattgatcctcattctctgtc 29080  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  29079 tgagtaccagccagagcaaaa 29059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 185; Significance: 1e-100; HSPs: 5)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 10589 - 10369
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10589 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 10490  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    || |||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  10489 agtaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtgttattaatatagcaagtacctctgatcaaacaatcctcattctctgtc 10390  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  10389 tgagtaccagccagagcaaaa 10369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13244 - 13024
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13244 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgat 13145  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |   ||||| ||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  13144 atttataaatcaatgcgtagcaccagtatcaataatagcaactaaaggagttttattaatatagcaagtacctctgatcaaacaatcctcattctctgtc 13045  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  13044 tgagtaccagccagagcaaaa 13024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 31836 - 32038
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  31836 atacgagagaagtagttaccgaacccttagctggagtttcgacaaccatctctccattcatatcaaacaaaacaagacccaaagcagaagcacaatcgaa 31935  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||    | ||||||||||||||||||    
T  31936 agcaataaaataatgcgtaacaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctg----agcgatcctcattctctgtc 32031  T
Q  201 tgagtac 207  Q
    || ||||    
T  32032 tgtgtac 32038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 37306 - 37504
Alignment:
Q  5 gagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  37306 gagagaagtagtaacagaacccttagctggagtttcgacaaccatctctccattcatatcaaacaaaacaagacccaaagcagaagcacaatcgaaagca 37405  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgag 204  Q
    |||||| |||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||    | |||||||||||||||||||| |    
T  37406 ataaaataatgcgtaacaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctg----agcgatcctcattctctgtctgtg 37501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 54595 - 54791
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    |||||||||   || | |||||||  ||||||    
T  54595 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatattagacatgaaaagacccaacttagtagcacaatcataagcaa 54694  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| |||||||| |||||| ||||    
T  54695 taaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaagcgatcctcgttctctttctg 54791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 185; Significance: 1e-100; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17417 - 17197
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17417 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagtagaaacacaatcgaa 17318  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17317 agcaataaagcaatgtgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctctgtc 17218  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| ||| |||| ||||    
T  17217 tgagtaccagctagagaaaaa 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 195189 - 194984
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | |||||||||||| |||| ||||||||||    
T  195189 atacgagagaagtagtcaccgaacccttagctggagtttcgacaactatctctccaatcatatcagacataacaagacccaaagtagaagcacaatcgaa 195090  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||  |||||||||||||  |||    
T  195089 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctaatcaggcgatcctcattcttggtc 194990  T
Q  201 tgagta 206  Q
    ||||||    
T  194989 tgagta 194984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24259 - 24465
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||  |||| | ||||| ||||    ||||||||||| |     
T  24259 atactagagaagtagtcactgaacccttagccggggtttcgacaaccatttctccattcatatatgacataacaagatccaatttcgaaacacaatcaac 24358  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    | ||||||||||||| ||||| | | |||| ||||||| || ||| |||||| |||||||  |||| |||||||| |||| | ||||||||||| || ||    
T  24359 aacaataaaacaatgtgtagccctagtatctataatagtaattaagggagtactattaatgaaacatgtacctcttatcagatgatcctcattcgctttc 24458  T
Q  201 tgagtac 207  Q
    |||||||    
T  24459 tgagtac 24465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 185; Significance: 1e-100; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14377 - 14597
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  14377 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcataccagacaaatcaagacccaaagcagaaacgcaatcgaa 14476  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14477 agcaataaagcaatgcgtagcaccaatatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtc 14576  T
Q  201 tgagtactagccagagtaaaa 221  Q
    | ||||  |||||||| ||||    
T  14577 taagtatcagccagagcaaaa 14597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 4873 - 5074
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||  |||| | ||| ||||||   |||| ||||||| | || ||    
T  4873 agagaagtagttactaaacccttagctggagtttcgacaaccatctctccattcatatttgacataacaaaacccaacttagaagcacaatcaatagaaa 4972  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||  || ||| || |||||| |||||||| || || |||||||||||||||||||| ||    
T  4973 taaaacaatgtgtagcaccagtatcaataatagcaactaaaggtatactatcaaaataacatgtacctctaattaatcgatcctcattctctgtctgcgt 5072  T
Q  206 ac 207  Q
    ||    
T  5073 ac 5074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 39679 - 39494
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  39679 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 39580  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  39579 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 39494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 44773 - 44712
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    ||||||||||| || |||||||||| ||||||||| |||||||| || || |||||||||||    
T  44773 agagaagtagttactgaacccttagttggagtttcaacaaccatttcccctttcatatcaga 44712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10321 - 10527
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10321 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 10420  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  10421 agcaataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctccgtc 10520  T
Q  201 tgagtac 207  Q
    || ||||    
T  10521 tgcgtac 10527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 831 - 611
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  831 atacgagagaagtagttacctaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 732  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  731 agcaataaagcaatgcgtagcaccagtatcaataatagcaacttaatgagtattattagtatagcaagtacctctgatcaaacgatcctcattctctgtc 632  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  631 tgagtaccagccagagaaaaa 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 94 - 314
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  94 atacgagagaagtagtcaccaaacccttagctgaagtttcgacgaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 193  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  194 agcaaaaaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctaatcaaacgatcctcattctctttc 293  T
Q  201 tgagtactagccagagtaaaa 221  Q
    | ||||| |||||||| ||||    
T  294 taagtaccagccagagcaaaa 314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 36451 - 36663
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36451 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagtagaaacacaatcgaa 36550  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||| |||    
T  36551 agcaatgaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagtgatcctcattctcggtc 36650  T
Q  201 tgagtactagcca 213  Q
    || |||| |||||    
T  36651 tgtgtaccagcca 36663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 174; Significance: 9e-94; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 37171 - 36962
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37171 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagataaatcaagacccaaagcagaaacacaatcgaa 37072  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| || ||||||||| |||||||||||||| |||||||||||||| |||    
T  37071 agcaataaaacaatgtgtagcaccagtatcaataatagcaactaaaggagtatgatcaatataacatgtacctctgatcaagcgatcctcattctcggtc 36972  T
Q  201 tgagtactag 210  Q
    ||||||||||    
T  36971 tgagtactag 36962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 26310 - 26511
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |  |||||||||   |||| ||||||| | | |||    
T  26310 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatattcgacatagtaagacccaacttagaagcacaatcaacaacaa 26409  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||| ||| || ||||||  ||||||| ||||| |||||||||||||||||||| ||    
T  26410 taaaacattgcgtagcaccaatatcaataatagcaactaaaagagtactatcaaaataacatttacctctaatcaatcgatcctcattctctgtctgcgt 26509  T
Q  206 ac 207  Q
    ||    
T  26510 ac 26511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 169; Significance: 8e-91; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 11707 - 11487
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11707 atacgagacaagtagtcaccgaacccttagctggagtttaaaaaaccatatctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 11608  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  11607 agcaataaagcaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatataacaagtacctctaatcaaacgatcctcaatctctgtc 11508  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| |||||||| ||||    
T  11507 tgagtaccagccagagcaaaa 11487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 15216 - 15172
Alignment:
Q  177 atcaaacgatcctcattctctgtctgagtactagccagagtaaaa 221  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  15216 atcaaacgatcctcattctctgtctgagtaccagccagagcaaaa 15172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 169; Significance: 8e-91; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 8126 - 7910
Alignment:
Q  5 gagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  8126 gagagaagtagtcaccgaacgtttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacccaatcaaaagca 8027  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgag 204  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  8026 ataaagcaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtaactctgatcaaacgatcctcattttctgtctgag 7927  T
Q  205 tactagccagagtaaaa 221  Q
    ||| |||||||| ||||    
T  7926 taccagccagagcaaaa 7910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 4231 - 4100
Alignment:
Q  10 aagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaa 109  Q
    ||||||| || |||||||||||||||||||| |||||||| |||||| |||||   |||| | | ||||||||   | |  ||||||| | |||||| ||    
T  4231 aagtagttactgaacccttagctggagtttcaacaaccatttctccactcatacttgacataaccagacccaacttatatgcacaatcaacagcaatgaa 4132  T
Q  110 acaatgcgtagcaccaatatcaataatagcaa 141  Q
    |||| | ||||||||| | |||||||||||||    
T  4131 acaaagtgtagcaccagtgtcaataatagcaa 4100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 166; Significance: 5e-89; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 424266 - 424467
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  424266 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagactcaaagcagaaacacaatcgtaggcaa 424365  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  424366 taaaacaatgcgtagcaccagtatcaataatagaaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctctgtctgagt 424465  T
Q  206 ac 207  Q
    ||    
T  424466 ac 424467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 203339 - 203508
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | || |||  || ||||||    
T  203339 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttataagcactttctaaagca 203437  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||    
T  203438 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctct 203508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 8211 - 8417
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  8211 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaattcaagacctaaagcagatacacaatcgaa 8310  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||    
T  8311 agcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcatcctcagtc 8410  T
Q  201 tgagtac 207  Q
    |||||||    
T  8411 tgagtac 8417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 163; Significance: 3e-87; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 30925 - 30719
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||    
T  30925 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaagcagaagcacaatcaaa 30826  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| |  ||||||||||| |||||||||||||| |||    
T  30825 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgctcctctgatcaagcgatcctcattctcagtc 30726  T
Q  201 tgagtac 207  Q
    |||||||    
T  30725 tgagtac 30719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 47328 - 47128
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| |  |||||||||   || | ||||||| | |||||    
T  47328 agagaagtagtcaccgaacc-ttagatggagtttcgacaaccatctctccattcatattagacatagaaagacccaacttagtagcacaatcaatagcaa 47230  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| |||||||||  ||||||||||| |||||| || ||| |||||| |||||||||||||||||| || |||||||| ||||| ||||||||    
T  47229 taaaacaatgtgtagcaccagaatcaataatagtaactaaaggtgtactattaaaataacaagtacctctgataaagcgatcctcgttctcagtctgagt 47130  T
Q  206 ac 207  Q
    ||    
T  47129 ac 47128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 152039 - 152154
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacac-aatcgaaagca 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | ||| ||||  |||||    
T  152039 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaaatcataagca 152138  T
Q  105 ataaaacaatgcgtag 120  Q
    ||||||||||||||||    
T  152139 ataaaacaatgcgtag 152154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 164747 - 164575
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  ||||| || ||||||||||| |||||||| || || ||| ||||||| | | | ||||||||   | || |||| || |  ||||    
T  164747 agagaagtagttattgaaccatttgctggagtttcaacaaccatttcccctttcttatcagatataaccagacccaacttataagcacattcaatggcaa 164648  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  164647 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 164575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 10509 - 10297
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||| |||| ||||||||||    
T  10509 atacgagagaagtagttaccgaacccttagctggagtttcgacaaccatctctccattcataccagacatatgtagacccaaagtagaagcacaatcgaa 10410  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10409 agcaataaaacaatgcgtggcaccagtatcaataatagcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctctgtc 10310  T
Q  201 tgagtactagcca 213  Q
    || || |||||||    
T  10309 tgtgtcctagcca 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 159; Significance: 8e-85; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21557 - 21763
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| ||||||||||    
T  21557 atacgagataagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcaaatcagacataacaagacccaaagtagaagcacaatcgaa 21656  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  21657 agcaataaaataatgcgtagcaccgatatcaataatagcaactaagggagtattattaatataacatgtacctctgatcaagcgatcctcattctcggtc 21756  T
Q  201 tgagtac 207  Q
    |||||||    
T  21757 tgagtac 21763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 36981 - 37187
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| ||||||||||    
T  36981 atacgagataagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcaaatcagacataacaagacccaaagtagaagcacaatcgaa 37080  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| |||    
T  37081 agcaataaaataatgcgtagcaccgatatcaataatagcaactaagggagtattattaatataacatgtacctctgatcaagcgatcctcattctcggtc 37180  T
Q  201 tgagtac 207  Q
    |||||||    
T  37181 tgagtac 37187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 159; Significance: 8e-85; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 11422 - 11628
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |    
T  11422 atacaagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagactcaaagcagaaacacaatcata 11521  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
     |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  11522 ggcaataaagcaatgagtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctccgtc 11621  T
Q  201 tgagtac 207  Q
    || ||||    
T  11622 tgcgtac 11628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 17890 - 18065
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |    
T  17890 atacaagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagactcaaagcagaaacacaatcata 17989  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctg 176  Q
     |||||||| ||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  17990 ggcaataaagcaatgagtagcaccagtatcaataatagcaattaaaggagtattattaatatagcaagtacctctg 18065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 40 - 205
Target Start/End: Original strand, 54996 - 55161
Alignment:
Q  40 cgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagc 139  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||| ||||| ||||||||| |||||||||||||    
T  54996 cgacaaccatctctccattcatatcagacaaatcaagactcaaagcagaaacacaatcataggcaataaagcaatgagtagcaccagtatcaataatagc 55095  T
Q  140 aactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  55096 aactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctccgtctgagt 55161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53680 - 53723
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgaca 44  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  53680 atacaagagaagtagtcaccgaacccttagctggagtttcgaca 53723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1383 - 1163
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||    
T  1383 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaaaaatcaagacccaaagtagaaacaaagtcgaa 1284  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |   |||||||||||||||||    
T  1283 agcaataaagcaatacgtagcaccagtatcaataatagcaactaaaggagtattattaatataacaagttcctctgattaggagatcctcattctctgtc 1184  T
Q  201 tgagtactagccagagtaaaa 221  Q
    || |||| ||| |||| ||||    
T  1183 tgtgtaccagctagagcaaaa 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 18605 - 18809
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  18605 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccgttcatatcagacaactcaagacccaaagcagaaacacaatcgaaag 18704  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    ||||||||||||||||||||| | ||||||||||| ||||||| || ||| ||| || ||||||||||||||||||||| |||||||| ||||| |||||    
T  18705 caataaaacaatgcgtagcactagtatcaataatatcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctcagtctg 18804  T
Q  203 agtac 207  Q
    |||||    
T  18805 agtac 18809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 2861 - 3037
Alignment:
Q  45 accatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaacta 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  2861 accatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaaaaaaacaatgcgtagcaccagtatcaataatagcaacta 2960  T
Q  145 atggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagccagagtaaaa 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||    
T  2961 atggagtattattaatataacaagtacctctgatcaaacgatcctcaatctctgtctaagtaccagccagagcaaaa 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 1 - 199
Alignment:
Q  9 gaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| || |||||||||||||||    
T  1 gaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaagtagaagcataatcgaaagcaataa 100  T
Q  109 aacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| | |||||||||||| |||||||||||||| ||||||||||    
T  101 aacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgaacctctgatcaagcgatcctcattctcggtctgagtac 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 935 - 1141
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||| ||    
T  935 atacgacagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaaacaagacccaaaaaagaaacacaatcaaa 1034  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| ||| |||| ||||| |||||||| ||||| |||    
T  1035 agcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactattaatataacatgtatctctaatcaagcgatcctcgttctcagtc 1134  T
Q  201 tgagtac 207  Q
    |||||||    
T  1135 tgagtac 1141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 50692 - 50490
Alignment:
Q  5 gagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |||| ||||||||||||||    
T  50692 gagagaagtagtcactgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaggtagaagcacaatcgaaagca 50593  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgag 204  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||  ||||||||||||||  ||||||    
T  50592 ataaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaggcgatcctcattctcgatctgag 50493  T
Q  205 tac 207  Q
    |||    
T  50492 tac 50490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 42656 - 42828
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| |   |||    
T  42656 agagaagtagttattgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttatatgcacaatcaactacaa 42755  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  42756 tgaaacaatgagtagcaccagtatctataatagcaaataaaggagtactattaaagaaacaagtacctctgat 42828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 147; Significance: 1e-77; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 35066 - 34860
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| ||||||||||    
T  35066 atacgagagacgtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacataacaagacccaaagtagaagcacaatcgaa 34967  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    | |||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||| ||||||||||||||  ||    
T  34966 aacaataaaacaatgcttagcaccagtatcaataatagcaactaaaggagtattatcaatataacatgtacctttgatcaagcgatcctcattctcgatc 34867  T
Q  201 tgagtac 207  Q
    |||||||    
T  34866 tgagtac 34860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 41587 - 41790
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||   ||| | ||||||||||   || | ||||||| | ||    
T  41587 acgagagaagtagtcaccgaacccttagctggagttttgacaaccatctctctattcatattttacatagcaagacccaacttagtagcacaatcaatag 41686  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| ||||||||||||||  ||||||||||||| |||||    
T  41687 caataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaagtgatcctcattctcagtctg 41786  T
Q  203 agta 206  Q
    ||||    
T  41787 agta 41790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 75307 - 75510
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||   ||| | ||||||||||   || | ||||||| | ||    
T  75307 acgagagaagtagtcaccgaacccttagctggagttttgacaaccatctctctattcatattttacatagcaagacccaacttagtagcacaatcaatag 75406  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctg 202  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| ||||||||||||||  ||||||||||||| |||||    
T  75407 caataaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaagtgatcctcattctcagtctg 75506  T
Q  203 agta 206  Q
    ||||    
T  75507 agta 75510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 37 - 213
Target Start/End: Complemental strand, 15894 - 15718
Alignment:
Q  37 tttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataat 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  15894 tttcgacaaccatctctccattcatatcagacaaatcaagacccaaagtagaaacacaatcgaaagcaattaaacaatgcgtagcaccagtatcaataat 15795  T
Q  137 agcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagcca 213  Q
     |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||    
T  15794 tgcaactaaaggagtattattaatataacaagtacctctgatcaagcgatcctcattctcggtctgtgtaccagcca 15718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 10739 - 10945
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||   || | ||||||| |     
T  10739 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattagacatagcaagacccaacttagtagcacaatcaat 10838  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    | ||||||||||||||||||||||||||||||||||||||||||| || ||| ||| || |||||||||||||||||||||||||||||| |||||| ||    
T  10839 aacaataaaacaatgcgtagcaccaatatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaaacgatcctcgttctctatc 10938  T
Q  201 tgagtac 207  Q
    |||||||    
T  10939 tgagtac 10945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 888 - 719
Alignment:
Q  9 gaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||| ||||||||||| | |||||| ||||||   | |  |||| || ||||||||     
T  888 gaagtagtcactgaacccttagctgaagtttcaacaaccatctctcctttcatatcagatacaatcaa-acccaacttatatgcacattctaaagcaatg 790  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  789 aaacaatgtgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14037 - 14257
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||   || | ||||||| ||    
T  14037 atacaagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacatagcaagacccaacttagtagcacaatcaaa 14136  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||| |||| |||||||| |||||||||| ||| |||||||| ||||| |||    
T  14137 agcaataaaacaatgcgtagcaccactatcaataatagcaactaaaggtgtactatttatataacatgtacctctgaccaagcgatcctcgttctcagtc 14236  T
Q  201 tgagtactagccagagtaaaa 221  Q
    ||||||| || ||||| ||||    
T  14237 tgagtaccagtcagagcaaaa 14257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 11307 - 11417
Alignment:
Q  91 cacaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctc 190  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||| || ||||||||||||||||||||| ||||||||    
T  11307 cacaatcaaaagcaataaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctc 11406  T
Q  191 attctctgtct 201  Q
     ||||||||||    
T  11407 gttctctgtct 11417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 2609 - 2394
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||   || | |||| ||  ||||||    
T  2609 agagaagtagtcaccgaacccttagctggagtttcgacaaccatgtctccattcatatcagacataacaagacccaacttagtagcacattcataagcaa 2510  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||| |||||||||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||    
T  2509 taaaagaatgcgtagcaccagtatcaataatagcaactaaaggtgtattattaatatagcaagtacctctgatcaagcgatcctcattctctgtctgtgt 2410  T
Q  206 actagccagagtaaaa 221  Q
    || || ||||| ||||    
T  2409 accagtcagagcaaaa 2394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 48651 - 48822
Alignment:
Q  34 gagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatcaat 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  | |||||||| ||||| ||||||||| |||||||    
T  48651 gagtttcgacaaccatctctccattcatatcagacaaatcaagactcaaagcagaaacacaatcataggcaataaagcaatgagtagcaccagtatcaat 48750  T
Q  134 aatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  48751 aatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcattctccgtctgagt 48822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 83872 - 83824
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccat 49  Q
    |||| |||||||||||||||||| ||||||| || ||||||| ||||||    
T  83872 atactagagaagtagtcaccgaatccttagccggggtttcgataaccat 83824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 8368 - 8569
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||||||    
T  8368 agagaagtagtcaccgaacccttaactggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagcaa 8467  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||| ||    
T  8468 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaagcaatcctcgttctctgtctgtgt 8567  T
Q  206 ac 207  Q
    ||    
T  8568 ac 8569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 23879 - 23678
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  23879 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatttgacatagcaagacccaacttagaagcacaatcaatagcaa 23780  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| ||||||||||||||| ||||||||||||||||||||||    
T  23779 taaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaaatgatcctcattctctgtctgagt 23680  T
Q  206 ac 207  Q
    ||    
T  23679 ac 23678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 151525 - 151678
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||| ||| | | | | ||||||   | || |||| || | |||||    
T  151525 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatataagatacaaccaaacccaacttataagcacattcaatagcaa 151624  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaa 159  Q
    | |||||||| ||||||| | |||| |||||||||| ||| |||||| ||||||    
T  151625 tgaaacaatgagtagcactagtatctataatagcaattaaaggagtactattaa 151678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 122; Significance: 9e-63; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 4392 - 4593
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||   || | ||||||| | |||||    
T  4392 agagaagtagtcaccgaacccttagatggagtttcgacaaccatctctccattcatattagacatagcaagacccaacttagtagcacaatcaatagcaa 4491  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||| ||| || ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  4492 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctcagtctgagt 4591  T
Q  206 ac 207  Q
    ||    
T  4592 ac 4593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 1 - 176
Alignment:
Q  32 tggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtagcaccaatatca 131  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||||||   || | ||||||| | ||||||||||||||||||||||||| |||||    
T  1 tggagtttcgacaaccatctctccattcatattagacatagcaagacccaacttagtagcacaatcaatagcaataaaacaatgcgtagcaccagtatca 100  T
Q  132 ataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||||||||| || ||| ||| || ||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  101 ataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctcagtctgagtac 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 14873 - 15070
Alignment:
Q  10 aagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaa 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||||||||||    
T  14873 aagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagcaataaa 14972  T
Q  110 acaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| |||||||| ||||||||||| ||||    
T  14973 acaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaagcgatcctcgttctctgtctgtgtac 15070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 207
Target Start/End: Complemental strand, 721 - 523
Alignment:
Q  9 gaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataa 108  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | |||||||  |||||||||    
T  721 gaagtagtcacagaacccttagctggagtttcgacaaccatttctccattcatatcagacatgacaagacccaatttagtagcacaatcataagcaataa 622  T
Q  109 aacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||||||||| |||||||| |||| |||||| ||||    
T  621 aacaatgcgtagcaccagtatcaataatagcaactaaaggtgtattatcaatataacaagtacctctgatcaagcgatcctcgttctatgtctgtgtac 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 8181 - 8382
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |   || | ||||||| |||||||    
T  8181 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacatatcaagtcccgactaagtagcacaatcaaaagcaa 8280  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||| | ||||||||||||||||||| || ||| ||| |  ||||||||||||||||||||| |||||||| ||||||||||| ||    
T  8281 taaaacaatgtgtagcactagtatcaataatagcaactaaaggcgtactatcacaataacaagtacctctgatcaagcgatcctcgttctctgtctgtgt 8380  T
Q  206 ac 207  Q
    ||    
T  8381 ac 8382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 55816 - 55615
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||||   || | ||||||| | |||||    
T  55816 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattagacatagtaagacccaacttagtagcacaatcaatagcaa 55717  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||| |||||||||||||| ||||||||||||||||||| || ||| ||| || ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  55716 taaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctcagtctgagt 55617  T
Q  206 ac 207  Q
    ||    
T  55616 ac 55615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 6 - 210
Target Start/End: Original strand, 1947 - 2151
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||||   || | ||||||| |||||||    
T  1947 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattagacatagaaagacccaacttagtagcacaatcaaaagcaa 2046  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    ||||| |||||||||||||| ||||||||||||||||||| || ||| ||| || ||||||||||| ||||||||| |||||||| |||||  |||||||    
T  2047 taaaaaaatgcgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacttctgatcaagcgatcctcgttctcattctgagt 2146  T
Q  206 actag 210  Q
    |||||    
T  2147 actag 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 11226 - 11025
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | |||||||  ||||||    
T  11226 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaatcataagcaa 11127  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||| | |||||||||||| |||||| || ||||||| |||||| |||||||||||||||||| ||||||| ||||||||||| ||    
T  11126 taaaacaatgtgtagcactagtatcaataatagaaactaaaggtgtattatcaatatagcaagtacctctgatcaaatgatcctcgttctctgtctgtgt 11027  T
Q  206 ac 207  Q
    ||    
T  11026 ac 11025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 40853 - 40652
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||   || | ||||||| |||||||    
T  40853 agagaagtagtcaccgaacccttagttggagtttcgacaaccatctctccattcatattagacataacaagacccaacttagtagcacaatcaaaagcaa 40754  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| |||||||||| |||||||| || ||| ||| || ||| ||||||||||||||||| |||||||| |||||| |||| ||    
T  40753 taaaacaatgcgtagcaccagtatcaataatggcaactaaaggtgtactatcaaaatagcaagtacctctgatcaagcgatcctcgttctctttctgtgt 40654  T
Q  206 ac 207  Q
    ||    
T  40653 ac 40652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 114; Significance: 6e-58; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 495978 - 496179
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||    ||| ||||||| | |||||    
T  495978 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatttgacatagcaagacccaacttcgaagcacaatcaatagcaa 496077  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||| | ||||||||||||||||||| ||  || ||| || |||||| ||||||||||||||||||||||||||||||||||| ||    
T  496078 taaaacaatgtgtagcactagtatcaataatagcaactaaaggtctactatcaaaataacatgtacctctgatcaaacgatcctcattctctgtctgcgt 496177  T
Q  206 ac 207  Q
    ||    
T  496178 ac 496179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 441611 - 441804
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |  |||||||||   |||| ||||||| | |||||    
T  441611 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatttgacatagtaagacccaatttagaagcacaatcaagagcaa 441710  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||| | | || |||||| |||| ||| ||||| |||||||||||||||||    
T  441711 taaaacaatccgtagcaccagtatcaataatagcaactaaaggagtactgtcaaaataacatgtacttctaatcaatcgatcctcattctctgt 441804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 514699 - 514527
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  514699 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttataagcacattcaatagcaa 514600  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  514599 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 514527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 15323 - 15124
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||| |  |||||||||   |||| ||||||| | |||||||    
T  15323 agaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatttgacatagtaagacccaacttagaagcacaatcaagagcaata 15224  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||| ||| || |||||| |||||||| ||||| |||||||||||||||||||| ||||    
T  15223 aaacaatgcgtagcaccagtattaataatagcaactaaaggagtactatcaaaataacatgtacctctaatcaatcgatcctcattctctgtctgcgtac 15124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 111253 - 111054
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||  |||| | ||||||||||   || | ||||||| | |||||    
T  111253 agagaagtagtcaacaaacccttagctggagtttcgacaaccatcactccattcatatttgacatagcaagacccaacttagtagcacaatcaatagcaa 111154  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||| |||||| |||||| |||||||||||||| |||||||||||||| ||||||||    
T  111153 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggtgtactattaaaataacatgtacctctgatcaagcgatcctcattctcagtctgagt 111054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 17836 - 18012
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||  |||| |  |||||||||   |||  ||||||| | |||||    
T  17836 agagaagtagtcaccaaacccttagctggagtttcgacaaccatttccccattcatattcgacatagtaagacccaacttagacgcacaatcaacagcaa 17935  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaa 182  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||| ||  ||||| |||||||| ||||||    
T  17936 taaaacaatgtgtagcaccagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaa 18012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 13825 - 13632
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  13825 agagaagtagtcaccgaactcttagctggagtttcgacaaccatctctccattcatattcgacatagcaagacccaacttagaagcacaatcaatagcaa 13726  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    || ||||||| |||||| |||||||||||||||||| ||| |||||| ||| ||  ||||| ||||||||||||||||||||||||||||||||    
T  13725 tagaacaatgtgtagcatcaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctgatcaaacgatcctcattctctgt 13632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 6831 - 7032
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  6831 agagaagtagtcaccaaacccttagctggagtttcgacaaccatttctccattcatattcgacatagcaagacccaacttagaagcacaatcaatagcaa 6930  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||| ||  ||| ||||||  || |  |||||| ||||||||||||||||||||||||||||||||||||||    
T  6931 taaaacaatgcgtagcaccagtatcaataataacagttaaaggagtacgatcacaataacatgtacctctgatcaaacgatcctcattctctgtctgagt 7030  T
Q  206 ac 207  Q
    ||    
T  7031 ac 7032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 13961 - 14162
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||| | ||||||||||   |||| ||||||| | |||||    
T  13961 agagaagtagtcaccaaacccttagctggagtttcgacaaccatttctccattcatattcgacatagcaagacccaacttagaagcacaatcaatagcaa 14060  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||| ||  ||| ||||||  || |  |||||| ||||||||||||||||||||||||||||||||||||||    
T  14061 taaaacaatgcgtagcaccagtatcaataataacagttaaaggagtacgatcacaataacatgtacctctgatcaaacgatcctcattctctgtctgagt 14160  T
Q  206 ac 207  Q
    ||    
T  14161 ac 14162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 24291 - 24090
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||| ||   || | ||||||| | |||||    
T  24291 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatttgacatagcaagacctaacttagtagcacaatcaatagcaa 24192  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||| | ||||||||||||||||||| || ||| ||| || ||||||||||||||||||||| |||||||  ||||| ||||||||    
T  24191 taaaacaatgcgtagcactagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatccttgttctcagtctgagt 24092  T
Q  206 ac 207  Q
    ||    
T  24091 ac 24090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 10118 - 9933
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | ||||||||   | || || | || | |||||    
T  10118 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaacttataagcaaattcaatagcaa 10019  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||| |||| |  |||||||||    
T  10018 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctttgataagtcgatcctca 9933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 57960 - 57759
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| | ||||||| ||   |||| ||||||| | | |||    
T  57960 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctttccattcatattcgacatagcaagacctaacttagaagcacaatcaataacaa 57861  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||| |||||||||||||||||| |||||||||||||||| ||    
T  57860 taaaacaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacatgtacctctgatcaaacgagcctcattctctgtctgcgt 57761  T
Q  206 ac 207  Q
    ||    
T  57760 ac 57759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 14612 - 14411
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||||||||   || | ||||||| | || ||    
T  14612 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatattcgacatagcaagacccaacttaggagcacaatcaatagaaa 14513  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| ||||||||| ||| | ||| |||||| ||| ||  ||||| ||||||||||||||||||||||||||||||||||| ||    
T  14512 taaaacaatgtgtagcaccagtatcaataaaagctattaaaggagtaatatcaaagtaacatgtacctctgatcaaacgatcctcattctctgtctgcgt 14413  T
Q  206 ac 207  Q
    ||    
T  14412 ac 14411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 3521 - 3710
Alignment:
Q  18 accgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcg 117  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||||||||   || | ||||||| | |||||||||||||||||    
T  3521 accgaacccttagctagagtttcgacaaccatctctccattcatattagacatagcaagacccaacttagtagcacaatcaatagcaataaaacaatgcg 3620  T
Q  118 tagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||| ||||||| ||||||||||| || ||| ||| || ||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  3621 tagcaccagtatcaatgatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagcgatcctcgttctcagtctgagtac 3710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 25058 - 24857
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   |||||||  |   || | |||||||  ||||||    
T  25058 agagatgtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatatcagacatgacaagacctgacttagtagcacaatcataagcaa 24959  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||| | |||||| |||||||||||||||||  ||||||| ||||||||||| ||    
T  24958 taaaacaatgcgtagcaccagtatcaataatagcaactaaaggcgtattgtcaatatagcaagtacctctgatcaagtgatcctcgttctctgtctgtgt 24859  T
Q  206 ac 207  Q
    ||    
T  24858 ac 24857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 17695 - 17494
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||    |||||||||   || | |||||||  ||| ||    
T  17695 agagaagtagtcagcgagcccttagctggagtttcgacaaccatttctccattcatatcaggcatgataagacccaacttagtagcacaatcataagaaa 17596  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    | |||||||||||||||||  ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||    
T  17595 tgaaacaatgcgtagcacctgtatcaataatagcaactaaaggtgtattattaatataacaagtacctctgatcaagcgatcctcattttctgtctgtgt 17496  T
Q  206 ac 207  Q
    ||    
T  17495 ac 17494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 40016 - 40203
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| ||  ||||||| ||||||||||| |||||||| ||||| ||||||||||| | ||||||  |||||   | |  |||  || ||||||    
T  40016 agagaagtagttactaaacccttggctggagtttcaacaaccatttctcctttcatatcagatacaatcaac-cccaacttatatgcactttctaaagca 40114  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    ||||||||||| ||||||||  | || |||||||||| ||| |||||| ||||||   ||||||||||||| || | ||| ||||||||    
T  40115 ataaaacaatgagtagcacctgtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctaataagacggtcctcatt 40203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 106; Significance: 3e-53; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 195
Target Start/End: Complemental strand, 23644 - 23455
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||   |||| ||| ||| | |||||    
T  23644 agagaagtagtcgccgaacccttagctggagtttcgacaaccatttctccattcatattagacatagcaagacccaacttagaagcactatcaagagcaa 23545  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattct 195  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||| ||| || |||||| ||||||||||| || |||||||||||||    
T  23544 taaaacaatgcgtagcactattatcaataatagcaactaaaggagtactatcaaaataacacgtacctctgattaatcgatcctcattct 23455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 9697 - 9496
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||    |||||||||   |||| ||||||| | |||||    
T  9697 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttctccattcatattcgacattgtaagacccaacttagaagcacaatcaagagcaa 9598  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||| | | || || ||| |||||||| ||||| ||||||||||||||| |||| ||    
T  9597 taaaacaatgcgtagcaccagtatcaataatatcaactaaaggagtactttcaaaatgacatgtacctctaatcaatcgatcctcattctctatctgtgt 9498  T
Q  206 ac 207  Q
    ||    
T  9497 ac 9496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 104185 - 104386
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||| | || ||||||||  |||| ||||||| | |||||    
T  104185 agagaagtagttacctaacccttagctggagtttcgacaaccatctctccattcatatttgacataacaggacccaaattagaagcacaatcaatagcaa 104284  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| |||||||||||| |||||| || ||| ||| || |||||| |||||||| |||||||||||||| ||| | ||||||||    
T  104285 taaaacaatgcgtagcaccattatcaataatagaaactaaaggtgtactatcaaaataacatgtacctctaatcaaacgatcctcgttcccagtctgagt 104384  T
Q  206 ac 207  Q
    ||    
T  104385 ac 104386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 8085 - 7884
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||||    || | ||||||| | |||||    
T  8085 agagaagttttcaccgaacccttagctggagtttcgacaaccatctctccattaatattagacatagcaagacccaccttagtagcacaatcaatagcaa 7986  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||| ||||| ||||||||| ||||||||||||||||||| || ||| ||| || |||||||||||||||||||||  ||||||| ||||| ||||||||    
T  7985 taaagcaatgtgtagcaccagtatcaataatagcaactaaaggtgtactatcaaaataacaagtacctctgatcaagtgatcctcgttctcagtctgagt 7886  T
Q  206 ac 207  Q
    ||    
T  7885 ac 7884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 6068 - 6264
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||| |  |||||||||   |||| ||||||  | ||    
T  6068 acgagagaagtagtcaccgaacccttagctggagtttcgacaatcatctctcctttcatattcgacatagtaagacccaacttagaagcacaataaatag 6167  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    || ||||||||||||||||| || ||||||||||||||| ||| |||||| ||| ||  ||||| |||||||| |||||||||||||||||||||||    
T  6168 cattaaaacaatgcgtagcatcagtatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctaatcaaacgatcctcattctctgt 6264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 15081 - 15268
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||  | |||||||||||||||||||| |||||||| ||||| ||||||||| | | |||||| ||||||   | |  |||| || | ||||    
T  15081 agagaagtagttgctgaacccttagctggagtttcaacaaccatttctcctttcatatcaaatacaatcaa-acccaacttatatgcacattcaatagca 15179  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| |||| |||||||||| ||| |||||| ||| ||   |||||||||||||||| |  |||||||||||    
T  15180 atgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactataaaagaaacaagtacctctgataagtcgatcctcatt 15268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 8908 - 9106
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||   ||||||||||   || | ||||||   ||||||    
T  8908 agagaagtagtcactgaacccttggctggagtttcgacaaccatttctccattcatatcagacatgacaagacccaacttagtagcacaataataagcaa 9007  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||   || ||||||||| ||||||||||||||||||| || ||||||| |||||| ||||||||||||||||| |||||||| ||||||||||| ||    
T  9008 taaaa---tgtgtagcaccagtatcaataatagcaactaaaggtgtattatcaatatagcaagtacctctgatcaagcgatcctcgttctctgtctgtgt 9104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 207
Target Start/End: Complemental strand, 216766 - 216565
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| | ||||||| ||    |||  |||||| | | |||    
T  216766 agagaagtagtcaccgaacccttagctggagtttctacaaccatctctccattcatattcgacatagcaagacctaactttgaagtacaatcaataacaa 216667  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||| ||||||||| ||||||||||||||| ||| | |||| ||| ||  ||||| ||||||||||||||  ||||||||||||||||||| ||    
T  216666 taaaacaatgtgtagcaccagtatcaataatagcaattaaagtagtactatcaaagtaacatgtacctctgatcaattgatcctcattctctgtctgcgt 216567  T
Q  206 ac 207  Q
    ||    
T  216566 ac 216565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 4544 - 4680
Alignment:
Q  9 gaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataa 108  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||||||||||   || | ||||||| | | ||||||    
T  4544 gaagtagtcaccgaaccctcagctggagtttcgacaaccatctctccattcatattagacatagcaagacccaacttagtagcacaatcaataacaataa 4643  T
Q  109 aacaatgcgtagcaccaatatcaataatagcaactaa 145  Q
    |||||||||||||||||||||||||||||||||||||    
T  4644 aacaatgcgtagcaccaatatcaataatagcaactaa 4680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 41452 - 41253
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    |||||||||||||||||||||||| | ||||||||||||||| || |||||||||   |||| | ||||||||||    |||||||||||   |||||||    
T  41452 agaagtagtcaccgaacccttagccgaagtttcgacaaccatttccccattcatagatgacataacaagacccaatttcgaaacacaatcagcagcaata 41353  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||| ||||||||| |||| ||||||| || ||| |||||| ||||||| ||||| ||||||||||||| | ||||||||||| ||||||||||||    
T  41352 aaacaatgtgtagcaccagtatctataatagtaattaagggagtactattaatgtaacatgtacctctgatcagatgatcctcattcgctgtctgagtac 41253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 5763 - 5935
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||| ||||||||||||| |||||||| ||| | ||||||||||| | | | ||||||||   | |  |||| |  | |||||    
T  5763 agagaagtagttactgaacccatagctggagtttcaacaaccatttcttctttcatatcagatacaaccagacccaacttatatgcacattaaatagcaa 5862  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||| | |||| |||||| ||| ||| |||||| ||||||   ||||||||||||||||    
T  5863 tgaaacaatgagtagcactagtatctataataacaattaaaggagtactattaaagaaacaagtacctctgat 5935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 230093 - 229983
Alignment:
Q  111 caatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactag 210  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||    
T  230093 caatgcgtagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtacctctgatcaaacgatcctcgttctctgtctgagtaccag 229994  T
Q  211 ccagagtaaaa 221  Q
    |||||| ||||    
T  229993 ccagagcaaaa 229983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 251580 - 251752
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  251580 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacatccaaacccaacttataagcacattcaatagcaa 251679  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||| | |||| |||||||||| ||| | |||| ||||||   ||||||||||||||||    
T  251680 tgaaacaatgagtagcactagtatctataatagcaattaaagaagtactattaaagaaacaagtacctctgat 251752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 15380 - 15561
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||| | |            ||| ||||||| | |||||    
T  15380 agagaagtagtcaccgaacccttagttggagtttcgacaaccatctctcctttcatatttgacaactta------------gaagcacaatcaatagcaa 15467  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||  ||||| |||||||||||||| |||||||||||||||||    
T  15468 taaaacaatgcgtagcaccaatatcaataatagcaattaaaggagtactatcaaagtaacatgtacctctgatcaatcgatcctcattctctgt 15561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 171181 - 171291
Alignment:
Q  111 caatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactag 210  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||    
T  171181 caatgcatagcaccagtatcaataatagcaactaaaggagtattattaatatagcaagtaactctgatcaaacgatcctcattctctgtctgagtaccag 171280  T
Q  211 ccagagtaaaa 221  Q
    |||||| ||||    
T  171281 ccagagcaaaa 171291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 5046 - 5247
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||   ||| | ||||||||||   |||| ||||||| | | |||    
T  5046 agagaagtagtcaccgaacccttagctggagtttcgacgaccatatctccattcatatttaacataacaagacccaacttagaagcacaatcaacaccaa 5145  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    |||||||||||||||||||| ||||||||||||||| |||  ||||| ||| ||  ||||| |||||||| ||||| || |||| ||||  |||||| ||    
T  5146 taaaacaatgcgtagcaccagtatcaataatagcaattaaaagagtactatcaaagtaacatgtacctctaatcaaccggtccttattcaatgtctgcgt 5245  T
Q  206 ac 207  Q
    ||    
T  5246 ac 5247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 1959 - 2154
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||  |||| |  |||||||||   || | |||||||   | |||||    
T  1959 agaagtagtcaccgaacccttagctggggtttcgacaaccatttccccattcatatatgacataataagacccaacttagtagcacaatcagcaacaata 2058  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctga 203  Q
    |||||||||||||||||| |||| ||||||| || ||| |||||| |||||||  |||| ||||||||||| | ||||||||||||| ||||||||    
T  2059 aaacaatgcgtagcaccagtatctataatagtaattaaaggagtactattaatgaaacatgtacctctgattagacgatcctcattcgctgtctga 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 11918 - 12090
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||| | | ||||||||   | |  ||||||| | |||||    
T  11918 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagacataaccagacccaacttatatgcacaatcaacagcaa 12017  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||| ||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  12018 tgaaacaatgagtagcgccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 12090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0789 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 1 - 97
Alignment:
Q  111 caatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||| ||||||| ||||||  ||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  1 caatgcgtagcaccactatcaattatagcacttaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcgttctctgtctgagtac 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 41693 - 41865
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  41693 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatatatccaaacccaacttataagcacattcaatagcaa 41792  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  41793 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 41865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 94240 - 94053
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |   ||||||||   | |  |||| || |||||||    
T  94240 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaagcagacccaacttatatgcacattctaaagcaa 94141  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    | |||||||||||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||||    
T  94140 tgaaacaatgcgtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatt 94053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 115520 - 115692
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||| | |||||| ||| |    | |  |||| || ||||||    
T  115520 agagaagtagtcactgaacccttagctggagtttcaacgaccatttctcctttcatatcagatacaatcaa-acctagtttatatgcacactctaaagca 115618  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| |||| |||||||||| ||| ||  || ||||||   ||||||||||||||||    
T  115619 atgaaacaatgtgtagcaccagtatctataatagcaattaaagggatactattaaagaaacaagtacctctgat 115692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12616 - 12678
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatat 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12616 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatat 12678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 3 - 83
Alignment:
Q  127 tatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||||| ||||||||||    
T  3 tatcaataatagcaactaaaggagtattatcaatataacatgtacctctgatcaagcgatcctcgttctcggtctgagtac 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 178
Target Start/End: Original strand, 29488 - 29657
Alignment:
Q  9 gaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataa 108  Q
    |||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||| | | ||||||||   | |  ||||||| |  ||||| |    
T  29488 gaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagacataaccagacccaacttatatgcacaatcaactgcaatga 29587  T
Q  109 aacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||||| ||||||| | |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  29588 aacaatgagtagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 29657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 43765 - 43572
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||  ||||||||||||||||||| |||||||| | ||||||||||||||||| | | ||||||||   | |  ||||||| | | |||    
T  43765 agagaagtagttactaaacccttagctggagtttcaacaaccatttttccattcatatcagacataaccagacccaacttatatgcacaatcaacaacaa 43666  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  43665 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 43572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 25176 - 25216
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaacca 48  Q
    ||||||||| | ||||||||||||| |||||||||||||||    
T  25176 agaagtagttatcgaacccttagctcgagtttcgacaacca 25216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 62; Significance: 6e-27; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 207
Target Start/End: Original strand, 29582 - 29783
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  29582 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaactagacccaacttatatgcacaatcaacagcaa 29681  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagt 205  Q
    | ||||| || ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  || ||||||||  ||||||| ||    
T  29682 tcaaacattgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattaactgtctgcgt 29781  T
Q  206 ac 207  Q
    ||    
T  29782 ac 29783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 64948 - 64761
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| ||| |||| ||||| ||||||||||| | |||||| |  |||   | |  |||| || ||||||    
T  64948 agagaagtagttactgaaccctttgctggagtttcaacagccatttctcctttcatatcagatacaatcaa-attcaacttatacgcacattctaaagca 64850  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  64849 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcatt 64761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 49526 - 49339
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| ||| |||| ||||| ||||||||||| | |||||| |  |||   | |  |||| || ||||||    
T  49526 agagaagtagttactgaacccttggctggagtttcaacagccatttctcctttcatatcagatacaatcaa-attcaacttatacgcacattctaaagca 49428  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||| ||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  49427 atgaaacaatgagtagctccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcatt 49339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 58560 - 58373
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| ||| |||| ||||| ||||||||||| | |||||| |  |||   | |  |||| || ||||||    
T  58560 agagaagtagttactgaacccttggctggagtttcaacagccatttctcctttcatatcagatacaatcaa-attcaacttatacgcacattctaaagca 58462  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||| ||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  58461 atgaaacaatgagtagctccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacggtcctcatt 58373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 201 - 29
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  201 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatataaccagacccaacttatatgcacaatcaacagcaa 102  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||  |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  101 tgaaacaatgagtagcacccgtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 29  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 12685 - 12857
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  12685 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttatatgcacaatcaacagcaa 12784  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||| |||||    
T  12785 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacccctgat 12857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 419 - 591
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| || ||||| || || ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  419 agagaagtagttactgaacccttagctggagtttcaacgaccatttcccctttcatatcagatacatccaaacccaacttataagcacattcaatagcaa 518  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||||||||  |||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  519 taaaacaatgactagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 1681 - 1851
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    ||||||||| || |||||||||||||||||||| | |||||| ||||||||||||||||||| | | ||||||||   | |  ||||||| | | ||||     
T  1681 agaagtagttactgaacccttagctggagtttcaagaaccatttctccattcatatcagacataaccagacccaacttatatgcacaatcaacaacaatg 1780  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  1781 aaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgat 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 4655 - 4449
Alignment:
Q  1 atacgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaa 100  Q
    |||| ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| | | |  |||||||   | |  ||||||| |     
T  4655 atactagagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagatataacccgacccaacttatatgcacaatcaac 4556  T
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtc 200  Q
    |||||| |||||||| ||||||||| |||| ||||||| || |||  ||||| ||||||   |||||||||||||||| |  || ||||||||| | |||    
T  4555 agcaatgaaacaatgagtagcaccagtatctataatagaaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcaccgtc 4456  T
Q  201 tgagtac 207  Q
    || ||||    
T  4455 tgcgtac 4449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 1618 - 1446
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||| | || |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||||||||   | |  ||||||  | | ||    
T  1618 agagaagtaattactgaacccttagctggagtttcaacaaccatttctccattcatatcagacataatc-agacccaacttatatgcacaattaacaaca 1520  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  1519 atgaaacaatgtgtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 5560 - 5753
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| ||  ||||||||||||||||||| |||||||| ||||||||||||||||||| | | ||||||||   | |  || || | | | |||    
T  5560 agagaagtagttactaaacccttagctggagtttcaacaaccatttctccattcatatcagacataaccagacccaacttatatgcataaacaacaacaa 5659  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  5660 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 5753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 5098 - 5171
Alignment:
Q  148 gagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagccagagtaaaa 221  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  5098 gagtattattaatatagcaagtacctctgatcaaacgatcctcattctctgtctgggtaccagccagagcaaaa 5171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 1200 - 1015
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||| | | | | ||||||||   | || |||| || | |||||    
T  1200 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcatatacaaccagacccaacttataagcacattcaatagcaa 1101  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  1100 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataattcgatcctca 1015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 28631 - 28459
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||| | || |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||||||||   | |  ||||||  | | ||    
T  28631 agagaagtaattactgaacccttagctggagtttcaacaaccatttctccattcatatcagacataatc-agacccaacttatatgcacaattaacaaca 28533  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  28532 atgaaacaatgtgtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 28459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 178
Target Start/End: Original strand, 29907 - 30064
Alignment:
Q  21 gaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtag 120  Q
    |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | ||||||||||||||| ||||    
T  29907 gaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaataaaacaatgagtag 30006  T
Q  121 caccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  30007 caccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 30064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 67454 - 67282
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| |||||||| || | |||||| ||||||   | |  |||  || || |||    
T  67454 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcggatacaatcaa-acccaacttatatgcactttctaaggca 67356  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  67355 ataaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 67282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 60697 - 60850
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  60697 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccattcatatcagatataactagacccaacttatatgcacaatcaacagcaa 60796  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaa 159  Q
    | |||||||| ||||||||| |||| |||||||||| ||| ||| || ||||||    
T  60797 tgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaa 60850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 178
Target Start/End: Original strand, 70081 - 70238
Alignment:
Q  21 gaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaataaaacaatgcgtag 120  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||||||||   | |  ||||||| | |||||| |||||||| ||||    
T  70081 gaacccttagctggagtttcaacaaccatttctccattcatatcagatataactagacccaacttatatgcacaatcaacagcaatgaaacaatgagtag 70180  T
Q  121 caccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    ||||| |||| |||||||||| ||| ||| || ||||||   ||||||||||||||||    
T  70181 caccagtatctataatagcaattaaaggaatactattaaagaaacaagtacctctgat 70238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 325665 - 325850
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  325665 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 325764  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  325765 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtaatattaaagaaacaagtacctctgataagtcgatcctca 325850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 178
Target Start/End: Complemental strand, 200817 - 200642
Alignment:
Q  3 acgagagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaag 102  Q
    |||||||||||||| || |||||||||||||||||||| |||||||| |||||| |||||   |||| | | ||||||||   | |  ||||||| | |     
T  200817 acgagagaagtagttactgaacccttagctggagtttcaacaaccatttctccactcatacttgacataaccagacccaacttatatgcacaatcaacaa 200718  T
Q  103 caataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||| |||||||| ||||||| | ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  200717 caatgaaacaatgtgtagcactagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 200642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 541 - 713
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||| ||||||||| |||||||| || || ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  541 agagaagtagttactgaacccttagatggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 640  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  641 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 1657 - 1485
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||| | ||||||||||||||||||||||| |||||||| ||||| ||| ||||||| | | | ||||||||   | |  |||| || | |||||    
T  1657 agagaagtaattaccgaacccttagctggagtttcaacaaccatttctcctttcgtatcagatacaaccagacccaacttatatgcacagtcaatagcaa 1558  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  1557 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 1161 - 989
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  1161 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacagccagacccaacttatatgcacaatcaatagcaa 1062  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||| | | || |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  1061 taaaacaatgagtagcactagtgtctataatagcaattaagggagtactattaaagaaacaagtacctttgat 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 6603 - 6416
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    |||||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | || |||  || ||||||    
T  6603 agagaagtagtcactgaacccttagccggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttataagcactttctaaagca 6505  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| |||||    |||||||||||||||| | ||| ||||||||    
T  6504 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattatagaaacaagtacctctgataagacggtcctcatt 6416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 5491 - 5319
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||  ||||||||||| | ||| | ||||||   | || |||| || | |||||    
T  5491 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcttttcatatcagatacatccatacccaacttataagcacattcaatagcaa 5392  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| |||  ||||| ||||||   ||||||||||||||||    
T  5391 tgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgat 5319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 11767 - 11939
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||| || || |||||||||||||||||||| |||||||| || || ||||||||||| | ||| | ||||||   | |  |||| || | |||||    
T  11767 agagaagtggttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacatccaaacccaacttatatgcacattcaatagcaa 11866  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  11867 taaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 11939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 7702 - 7874
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||| | ||||||||||||||||||||||| |||||||| ||||| ||| ||||||| | | | ||||||||   | |  |||| || | |||||    
T  7702 agagaagtaattaccgaacccttagctggagtttcaacaaccatttctcctttcgtatcagatacaaccagacccaacttatatgcacagtcaatagcaa 7801  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  7802 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 7874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 17830 - 17643
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  17830 agagaagtagttactgaacccttggctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 17732  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||  ||||||||||| || |||||||||| ||| |||||| ||||||   |||||||||||||||| | ||||||||||||    
T  17731 atgaaacaataagtagcaccaatgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagacgatcctcatt 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 5195 - 5008
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  5195 agagaagtagttactgaacccttggctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 5097  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    || |||||||| ||||||||| | || |||||| ||| ||| |||||| ||||||   |||||||||||||||| | ||| ||||||||    
T  5096 atgaaacaatgtgtagcaccagtgtctataatatcaattaaaggagtagtattaaagaaacaagtacctctgataagacggtcctcatt 5008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 175946 - 176117
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| ||||||||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  175946 agagaagtagttagtgaacccttagctggagtttcaacaaccatttctccattcatatcagatataaccagacccaacttatatgcacaatcaacagcaa 176045  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||| || | || |||||||||||||    
T  176046 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactataaaga-aataagtacctctgat 176117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 98929 - 98757
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||| ||| | | | ||||||||   | || |||| || | || ||    
T  98929 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcccttcatattagatacaaccagacccaacttataagcacattcaatagtaa 98830  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  98829 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctttgat 98757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 8 - 178
Target Start/End: Complemental strand, 4433 - 4263
Alignment:
Q  8 agaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaata 107  Q
    ||||||||| || |||||||||||||||||||| |||||||| |||||| |||||   |||| |   ||||||||   | |  ||||||| | ||||||     
T  4433 agaagtagttactgaacccttagctggagtttcaacaaccatttctccactcatacttgacataagtagacccaacttatatgcacaatcaacagcaatg 4334  T
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||| ||||||||| ||||||||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  4333 aaacaatgagtagcaccagtatcaataatagcaattaaaggagtactattaaagaaacaagtacctctgat 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 21531 - 21413
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||| ||||   |||| | |||| |||||   |||| |||||||   |||||    
T  21531 agagaagtagtcaccgaacccttagctggagtttcgacaaccatttccccatccatacatgacataacaaggcccaacttagaagcacaatcagtagcaa 21432  T
Q  106 taaaacaatgcgtagcacc 124  Q
    |||||||||||||||||||    
T  21431 taaaacaatgcgtagcacc 21413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 16840 - 16762
Alignment:
Q  121 caccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    ||||| ||||||||||||||| ||| ||||||  |||||   |||| |||||||||||||| || ||||||||| ||||    
T  16840 caccagtatcaataatagcaattaaaggagtacaattaaagaaacatgtacctctgatcaaccggtcctcattcactgt 16762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 5139 - 5332
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    |||||| |||| || ||| ||| |||||||||||| |||||||| ||||| ||||||||||||| | | ||||||||   | |  ||||||| | |||||    
T  5139 agagaaatagttactgaaacctcagctggagtttcaacaaccatttctcctttcatatcagacataaccagacccaacttatatgcacaatcaacagcaa 5238  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    | |||||||| ||||||||| |||| |||||||||| |||  ||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  5239 tgaaacaatgagtagcaccagtatctataatagcaattaaatgagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 5332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 6996 - 7181
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | | ||||||   | || |||| || | |||||    
T  6996 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagaaacaaccaaacccaacttataagcacattcaatagcaa 7095  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  7096 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 7181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 8572 - 8757
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| || |||||||| | | | | ||||||   | |  |||| || | |||||    
T  8572 agagaagtagttactgaacccttagctggagtttcaacaaccatttctccttttatatcagatacaaccaaacccaacttatatgcacattcaatagcaa 8671  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  8672 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 8757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 50063 - 50232
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| ||||| || ||||| ||||||||||| | | | || |||||   | |  ||||||| | |||||    
T  50063 agagaagtagttactgaacccttagctggagtttcaacaacaatttctcctttcatatcagatacaactagccccaacttatatgcacaatcaacagcaa 50162  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||    
T  50163 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctct 50232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 63865 - 63672
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | | |||    
T  63865 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttatatgcacaatcaacaacaa 63766  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgt 199  Q
    | |||||||| ||| ||||| |||| |||||||||| |||  ||||| ||||||   |||||||||||||||| |  || ||||||||| ||||    
T  63765 tgaaacaatgagtaacaccagtatctataatagcaattaaaagagtactattaaagaaacaagtacctctgataagtcggtcctcattcactgt 63672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 20772 - 20944
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| |   | ||||||||   | || |||| || | |||||    
T  20772 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacgaccagacccaacttataagcacattcaatagcaa 20871  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  20872 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 20944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 833 - 772
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| |||||||||||    
T  833 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcaga 772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 738 - 661
Alignment:
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||| ||||| || ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  738 agcaattaaacattgtgtagcaccagtttctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 1078 - 1250
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || ||||||||| |||||||||| ||||| || || || ||||||||||| | | | ||||||||   | || |||| || | |||||    
T  1078 agagaagtagttactgaacccttaactggagtttcaacaacaatttcccctttcatatcagatacaaccagacccaacttataagcacattcaatagcaa 1177  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  1178 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 2298 - 2126
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | ||||||||   | ||  ||| || | |||||    
T  2298 agagaagtagttactgaacccttagctggagtttcaacaaccatatcccctttcatatcagatacaaccagacccaacttataagaacattcaatagcaa 2199  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| ||| || ||||||   ||||||||||||||||    
T  2198 tgaaacaatgagtagcaccagtatctataatagcaattaaaggaatactattaaagaaacaagtacctctgat 2126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 70330 - 70517
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||| ||| ||||||| ||||| || ||||| ||||||||||| | ||||| |||||||   | |  |||| || ||||||    
T  70330 agagaagtagttactgaacccttggctagagtttcaacaacaatttctcctttcatatcagatacaatca-gacccaacttatatgcacattctaaagca 70428  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcatt 193  Q
    |  |||||||| ||| ||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||||    
T  70429 aagaaacaatgagtaacaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctcatt 70517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 30371 - 30446
Alignment:
Q  132 ataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtac 207  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||| ||||| ||||||||||    
T  30371 ataatagcaactaaaggagtattatcaatataacatgtacctctgatcaagcgatcctcgttctcggtctgagtac 30446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 69634 - 69560
Alignment:
Q  139 caactaatggagtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactagcca 213  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||| |||||    
T  69634 caactaaaggagtattattaatatagcaagtacctctgatcaagcgatcctcattctttgtctgtgtaccagcca 69560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 263184 - 263353
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  263184 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 263282  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||    
T  263283 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctct 263353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 5555 - 5370
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||| ||| | | | ||||||||   | || |||| || | |||||    
T  5555 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatattagatacaaccagacccaacttataagcacattcaatagcaa 5456  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| |||||||||   || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  5455 tgaaacaatgagtagcaccagcgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 2829 - 2998
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||| | | | |||    
T  2829 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttatatgcacaagcaacaacaa 2928  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    | |||||||| ||||| ||| |||| |||||||||| ||| |||||| ||||||   |||||||||||||    
T  2929 tgaaacaatgagtagccccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctct 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 9573 - 9388
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| ||||| || || |  ||||||||||| | | | ||||||||   | ||  ||| || | |||||    
T  9573 agagaagtagttactgaacccttagctggagtttcaacaactatttcccgtttcatatcagatacaaccagacccaacttataagtacattcaatagcaa 9474  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||||||||| | || |||||||||| ||| |||||| |||||||  |||||||||||||||| |  |||||||||    
T  9473 tgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaatgaaacaagtacctctgataagtcgatcctca 9388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 10132 - 9960
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || | |||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||  || ||||||    
T  10132 agagaagtagttactgtacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaagca 10034  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  10033 atgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 8808 - 8623
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||| ||   | || |||| |||| |||||    
T  8808 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacctaacttataagcacattcgatagcaa 8709  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | ||||| || ||||||| | | || |||||||||| ||| ||| || ||||||   |||||||||||||||| |  |||||||||    
T  8708 tgaaacattgagtagcactagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctca 8623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 19022 - 18837
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||| ||   | || |||| |||| |||||    
T  19022 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacctaacttataagcacattcgatagcaa 18923  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | ||||| || ||||||| | | || |||||||||| ||| ||| || ||||||   |||||||||||||||| |  |||||||||    
T  18922 tgaaacattgagtagcactagtgtctataatagcaattaaaggattactattaaagaaacaagtacctctgataagtcgatcctca 18837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 54005 - 54190
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| ||| ||||||||||||| | | | |||| |||   | || |||| || | |||||    
T  54005 agagaagtagttaatgaacccttagctggagtttcaacaaccatttctacattcatatcagatacaaccagacacaacttataagcacattcaatagcaa 54104  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    | |||||||| ||| ||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  54105 tgaaacaatgagtaacaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 54190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 65644 - 65472
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||||   | |  |||| || ||||||    
T  65644 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatcaa-acccaacttatatgcacattctaaagca 65546  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |  |||||||| ||||||||| | || |||||||||| ||| || ||| ||||||   ||||||||||||||||    
T  65545 aggaaacaatgagtagcaccagtgtctataatagcaattaaaggtgtactattaaagaaacaagtacctctgat 65472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 36897 - 37069
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| ||||| ||||||||||| | | | ||||||||     |  ||||||| | | |||    
T  36897 agagaagtagttattgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaaccagacccaacttgtatgcacaatcaacatcaa 36996  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||| ||||    
T  36997 tgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctatgat 37069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 11072 - 11179
Alignment:
Q  92 acaatcgaaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    |||||| | ||||||||||||||| |||| |||| ||||||||||| ||| |||  ||||| ||| ||  ||||| |||||||| |||||||||||||||    
T  11072 acaatcaatagcaataaaacaatgagtagtaccagtatcaataataacaattaaatgagtactatcaaagtaacatgtacctctaatcaaacgatcctca 11171  T
Q  192 ttctctgt 199  Q
    ||||||||    
T  11172 ttctctgt 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 3559 - 3622
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca 69  Q
    |||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  3559 agagaaatagttaccgaaaccttagctgcagtttcgacaaccatctctccattcatatcagaca 3622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 3644 - 3697
Alignment:
Q  150 gtattattaatataacaagtacctctgatcaaacgatcctcattctctgtctga 203  Q
    ||||||| || ||||||||||||||||||||| |||||||  ||||| ||||||    
T  3644 gtattatcaaaataacaagtacctctgatcaagcgatcctagttctcagtctga 3697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 1229 - 1057
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||| ||||||||   |    ||||||| | | ||    
T  1229 agagaagtagttactgaacccttagctggagtttcaacaaccatttctcctttcatatcagatacaatc-agacccaacttatgcgcacaatcaacaaca 1131  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || ||| |||| ||||||||| || | |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  1130 atgaaataatgagtagcaccagtagctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 1057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 110568 - 110721
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || ||||||||||| |||||||  |||||||| ||||| ||||||||||||| | | ||||||||   | |  ||||||| | | |||    
T  110568 agagaagtagttactgaacccttagccggagttttaacaaccatttctcctttcatatcagacacaaccagacccaacttatatgcacaatcaacaacaa 110667  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaa 159  Q
    | |||||||| ||||||||| |||| |||| ||||| ||| |||||| ||||||    
T  110668 tgaaacaatgagtagcaccagtatctataacagcaattaaaggagtactattaa 110721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 14219 - 14171
Alignment:
Q  165 caagtacctctgatcaaacgatcctcattctctgtctgagtactagcca 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14219 caagtacctctgatcaaacgatcctcattctctgtctgagtaccagcca 14171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 30672 - 30500
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| ||||||||  | || ||||||||||| | | | | ||||||   | |  |||| || | | |||    
T  30672 agagaagtagttactgaacccttagctggagtttcaacaaccattacccctttcatatcagatacaaccaaacccaacttatatgcacattcaatatcaa 30573  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| |||||||||||||| |||||||||| ||| |||||| | ||||   ||||||||||||||||    
T  30572 tgaaacaatgagtagcaccaatatctataatagcaattaaaggagtacttttaaagaaacaagtacctctgat 30500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 1 - 52
Alignment:
Q  170 acctctgatcaaacgatcctcattctctgtctgagtactagccagagtaaaa 221  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  1 acctctgatcaaacgatcctcattctctgtctgagtaccagccagagcaaaa 52  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 20874 - 20743
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||||||||||| |||||||| || || ||||||||||| | | | ||||||||   | |  ||||||| | |||||    
T  20874 agagaagtagttactgaacccttagctggagtttcaacaaccatttcccctttcatatcagatacaaccagacccaatttatatgcacaatcaacagcaa 20775  T
Q  106 taaaacaatgcgtagcaccaatatcaataata 137  Q
    | |||||||| ||||||||| |||| ||||||    
T  20774 tgaaacaatgagtagcaccagtatctataata 20743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 12694 - 12637
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatat 63  Q
    ||||||||||| || |||||||||| ||||||||| |||||||| ||||| |||||||    
T  12694 agagaagtagttactgaacccttagttggagtttcaacaaccatttctcctttcatat 12637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 3516 - 3455
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    |||||||||||||| |||||||||||||||||||| || ||||| ||||| |||||||||||    
T  3516 agagaagtagtcactgaacccttagctggagtttcaacgaccatttctcctttcatatcaga 3455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 21809 - 21870
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    |||||||||||||| |||||||||||||||||||| || ||||| ||||| |||||||||||    
T  21809 agagaagtagtcactgaacccttagctggagtttcaacgaccatttctcctttcatatcaga 21870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 53769 - 53708
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||    
T  53769 agagaagtagtcactgaacccttagctggagtttcaacaaccatttctcctttcatttcaga 53708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 53667 - 53597
Alignment:
Q  108 aaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  53667 aaacaatgagtagcaccagtttctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 53597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 180 - 8
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| ||  ||||||||| ||||||||| |||||||| ||||| ||||||||||| | |||||| || |||   | |  |||  || ||||||    
T  180 agagaagtagttactaaacccttagttggagtttcaacaaccatttctcctttcatatcagatacaatcaa-actcaacttatatgcactttctaaagca 82  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || ||||||||  |||||| | |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  81 atgaaacaatgaatagcactagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 11788 - 11939
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| |  |||||||||||||||||||| |||||||| |||||| ||||| | ||| |||| ||||||||   | |  ||||||| | |||||    
T  11788 agagaagtagttattgaacccttagctggagtttcaacaaccatttctccactcatacctgac-aatc-agacccaacttatatgcacaatcaatagcaa 11885  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaa 159  Q
    | |||||||| |||||||||   || |||||||||| ||| |||||| ||||||    
T  11886 tgaaacaatgtgtagcaccatggtctataatagcaattaaaggagtactattaa 11939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 10935 - 11107
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagaca-aatcaagacccaaagcagaaacacaatcgaaagca 104  Q
    ||||||||||| || |||||||||| ||||||||| ||||  || ||||| ||||||||||| | |||||| ||||||   | |  |||  || |||  |    
T  10935 agagaagtagttactgaacccttagttggagtttcaacaagtatttctcctttcatatcagatacaatcaa-acccaacttatatgcactttctaaaaaa 11033  T
Q  105 ataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    || |||||||| ||||||||| |||| |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  11034 atgaaacaatgagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 11107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 26070 - 26131
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcaga 67  Q
    ||||||||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||    
T  26070 agagaagtagttactgaacccttggctggagtttcaacaaccatttctcctttcatatcaga 26131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 1 - 53
Alignment:
Q  158 aatataacaagtacctctgatcaaacgatcctcattctctgtctgagtactag 210  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| |||||||    
T  1 aatatagcaagtacctctgatcaagcgatcctcgttctctgtctgtgtactag 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 178
Target Start/End: Original strand, 22080 - 22252
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||| |||||||  |||||| |||||||| ||||| ||||||||||| | | | | ||||||   | |  |||| || | |||||    
T  22080 agagaagtagttactgaacacttagctaaagtttcaacaaccatttctcctttcatatcagatacaaccaaacccaacatatatgcacattcaatagcaa 22179  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    | |||||||| ||| ||||| |||| |||||| ||| ||| |||||| ||||||   ||||||||||||||||    
T  22180 tgaaacaatgagtaacaccagtatctataataccaattaaaggagtactattaaagaaacaagtacctctgat 22252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 2101 - 2022
Alignment:
Q  99 aaagcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgat 178  Q
    |||||||| |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   ||||||||||||||||    
T  2101 aaagcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgat 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 49223 - 49088
Alignment:
Q  6 agagaagtagtcaccgaacccttagctggagtttcgacaaccatctctccattcatatcagacaaatcaagacccaaagcagaaacacaatcgaaagcaa 105  Q
    ||||||||||| || |||||||||||| || |||| |||||||| ||||| ||||||||||| | | | ||||||||   | |  ||||||| | | |||    
T  49223 agagaagtagttactgaacccttagcttgattttcaacaaccatttctcctttcatatcagatacaaccagacccaacttatatgcacaatcaacatcaa 49124  T
Q  106 taaaacaatgcgtagcaccaatatcaataatagcaa 141  Q
    | |||||||| ||||||| | |||| ||||||||||    
T  49123 tgaaacaatgagtagcactagtatctataatagcaa 49088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 9272 - 9182
Alignment:
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctctgatcaaacgatcctca 191  Q
    |||||| |||||||| ||||||||| | || |||||||||| ||| |||||| ||||||   |||||||||||||||| |  |||||||||    
T  9272 agcaatgaaacaatgagtagcaccagtgtctataatagcaattaaaggagtactattaaagaaacaagtacctctgataagtcgatcctca 9182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 34390 - 34464
Alignment:
Q  101 agcaataaaacaatgcgtagcaccaatatcaataatagcaactaatggagtattattaatataacaagtacctct 175  Q
    |||||| |||||||| ||||||||| |||| |||||||||  ||| |||||| ||||||   |||||||||||||    
T  34390 agcaatgaaacaatgagtagcaccagtatctataatagcagttaaaggagtactattaaagaaacaagtacctct 34464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University