View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8921_low_141 (Length: 218)

Name: NF8921_low_141
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8921_low_141
NF8921_low_141
[»] chr3 (20 HSPs)
chr3 (62-218)||(25637666-25637822)
chr3 (62-218)||(4598299-4598455)
chr3 (62-218)||(4600520-4600676)
chr3 (62-218)||(3617686-3617842)
chr3 (62-218)||(10211631-10211788)
chr3 (62-218)||(10056456-10056612)
chr3 (62-218)||(10058678-10058834)
chr3 (62-218)||(10060900-10061056)
chr3 (62-218)||(10063122-10063278)
chr3 (62-218)||(10065344-10065500)
chr3 (62-218)||(10067543-10067699)
chr3 (62-218)||(10209411-10209568)
chr3 (91-218)||(45283222-45283345)
chr3 (114-218)||(54635359-54635462)
chr3 (91-218)||(6716735-6716859)
chr3 (96-218)||(7779821-7779937)
chr3 (168-215)||(23200022-23200069)
chr3 (118-218)||(801321-801419)
chr3 (118-211)||(5257983-5258073)
chr3 (167-215)||(23197822-23197870)
[»] chr5 (18 HSPs)
chr5 (60-218)||(10593494-10593652)
chr5 (62-218)||(25078357-25078513)
chr5 (62-218)||(25136326-25136482)
chr5 (62-218)||(40380327-40380483)
chr5 (62-218)||(16544647-16544804)
chr5 (61-218)||(40382538-40382695)
chr5 (62-218)||(16546869-16547026)
chr5 (88-218)||(22536100-22536224)
chr5 (93-218)||(29720598-29720721)
chr5 (92-218)||(29750969-29751093)
chr5 (93-218)||(29722758-29722881)
chr5 (96-218)||(9789042-9789157)
chr5 (96-218)||(18441462-18441577)
chr5 (99-215)||(16409714-16409824)
chr5 (27-62)||(26437996-26438031)
chr5 (27-62)||(26451365-26451400)
chr5 (118-211)||(13343299-13343389)
chr5 (118-215)||(30182823-30182917)
[»] chr6 (15 HSPs)
chr6 (62-218)||(6027482-6027638)
chr6 (62-218)||(13154151-13154308)
chr6 (62-218)||(33341878-33342035)
chr6 (62-218)||(25421542-25421698)
chr6 (62-218)||(34165095-34165251)
chr6 (61-218)||(34167316-34167473)
chr6 (62-199)||(6136079-6136216)
chr6 (62-174)||(13159051-13159164)
chr6 (91-218)||(16555106-16555228)
chr6 (91-218)||(16578327-16578449)
chr6 (91-218)||(16616931-16617053)
chr6 (91-218)||(16631662-16631784)
chr6 (91-218)||(16653349-16653471)
chr6 (91-218)||(27648088-27648210)
chr6 (118-211)||(2171366-2171456)
[»] chr2 (7 HSPs)
chr2 (62-218)||(13655805-13655961)
chr2 (62-218)||(12647162-12647318)
chr2 (118-218)||(6266926-6267023)
chr2 (96-215)||(32289803-32289916)
chr2 (168-215)||(4484213-4484261)
chr2 (168-215)||(4503018-4503066)
chr2 (168-215)||(30833583-30833631)
[»] chr8 (7 HSPs)
chr8 (62-218)||(15290760-15290917)
chr8 (62-218)||(15471129-15471286)
chr8 (62-218)||(42575100-42575257)
chr8 (91-218)||(25690190-25690313)
chr8 (91-218)||(3439738-3439861)
chr8 (96-218)||(2627970-2628087)
chr8 (168-215)||(31218492-31218540)
[»] chr7 (10 HSPs)
chr7 (61-218)||(18388535-18388692)
chr7 (62-218)||(18391972-18392128)
chr7 (61-218)||(1560440-1560597)
chr7 (61-218)||(32060097-32060254)
chr7 (62-218)||(6592116-6592272)
chr7 (62-218)||(6594334-6594490)
chr7 (91-218)||(20344131-20344255)
chr7 (118-214)||(24790240-24790333)
chr7 (118-211)||(43503991-43504080)
chr7 (168-215)||(39731606-39731654)
[»] chr1 (7 HSPs)
chr1 (61-218)||(44203868-44204025)
chr1 (91-218)||(9036652-9036775)
chr1 (92-218)||(9987436-9987558)
chr1 (92-218)||(21054192-21054314)
chr1 (118-218)||(40282611-40282711)
chr1 (118-218)||(20622072-20622171)
chr1 (168-215)||(51765634-51765682)
[»] scaffold0565 (1 HSPs)
scaffold0565 (62-218)||(2380-2536)
[»] scaffold0137 (1 HSPs)
scaffold0137 (62-218)||(6511-6667)
[»] chr4 (7 HSPs)
chr4 (62-218)||(8395840-8395996)
chr4 (62-218)||(7122919-7123075)
chr4 (62-218)||(8393631-8393787)
chr4 (62-218)||(7125138-7125294)
chr4 (61-218)||(5138528-5138685)
chr4 (62-218)||(5136303-5136459)
chr4 (118-215)||(31495143-31495238)
[»] scaffold1808 (1 HSPs)
scaffold1808 (105-218)||(101-214)
[»] scaffold0674 (1 HSPs)
scaffold0674 (105-218)||(3545-3658)
[»] scaffold0491 (2 HSPs)
scaffold0491 (168-215)||(8618-8666)
scaffold0491 (168-215)||(11044-11092)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 25637822 - 25637666
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637822 tgttgtgaatccccggacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 25637723  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  25637722 tattgtgcaagcaggaaacaacaaaacaccacctagatctaatctaggaaacaagtg 25637666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 4598299 - 4598455
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      
T  4598299 tgttgtgaatccccgaacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagct 4598398  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||    
T  4598399 tattgagcaagcaagaaacaataaaacaccacctagatccaatctaggaaacaagtg 4598455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 4600520 - 4600676
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      
T  4600520 tgttgtgaatccccgaacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagct 4600619  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  4600620 tattgagcaagccagaaacaacaaaacaccacctagatccaatctaggaaacaagtg 4600676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 3617842 - 3617686
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||   ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||     
T  3617842 tgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaataagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 3617743  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3617742 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 3617686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10211788 - 10211631
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||     
T  10211788 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacagagaataatgatgtgtggagcgacggagagtggtaaccaccaatcaaagc 10211689  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10211688 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtg 10211631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10056612 - 10056456
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||     
T  10056612 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10056513  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10056512 ttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtg 10056456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10058834 - 10058678
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||     
T  10058834 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10058735  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10058734 ttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtg 10058678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10061056 - 10060900
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||     
T  10061056 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10060957  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10060956 ttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtg 10060900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10063278 - 10063122
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||     
T  10063278 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10063179  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10063178 ttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtg 10063122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10065500 - 10065344
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||     
T  10065500 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10065401  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10065400 ttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtg 10065344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10067699 - 10067543
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||     
T  10067699 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 10067600  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10067599 ttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtg 10067543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 10209568 - 10209411
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||     
T  10209568 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacagagaataatgatgtgtggagtgacggagagtggtaaccaccaatcaaagc 10209469  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  10209468 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtg 10209411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 45283345 - 45283222
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||| |||||||||| ||| |||||||| || |||||| ||||    
T  45283345 gatcgaaccacaccaatacaaagaat---gatgtgtggagcgacggagagcggtaaccaccaaacaaagtgt-ttgtgcaagcaataatcaacaaaacac 45283250  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||| ||||    
T  45283249 cacctagatctaatctaggaaactagtg 45283222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 218
Target Start/End: Complemental strand, 54635462 - 54635359
Alignment:
Q  114 aataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaac 213  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||| | | |||||||| || |||||| |||||||||||||||||||||||||||    
T  54635462 aataatgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaac 54635364  T
Q  214 aagtg 218  Q
    |||||    
T  54635363 aagtg 54635359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 6716859 - 6716735
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaac-aataca 189  Q
    ||||||||||||||||| |||||| |   |||||||||||| ||||| || |||||||||| |||||||||| | | |||||||| || |||| || |||    
T  6716859 gatcgaaccacaccaatgcaaagagt---gatgtgtggagcaacggaaagcggtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaaccaaaaca 6716764  T
Q  190 ccacctagatctaatctaggaaacaagtg 218  Q
    |||||||||||||||||||||||||||||    
T  6716763 ccacctagatctaatctaggaaacaagtg 6716735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 7779821 - 7779937
Alignment:
Q  96 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaata-caccacc 194  Q
    |||||||||||||| |||  ||| |||||||||||| | ||||||||||||||||| |||||||||| |   |||||||| || |||||| | || ||||    
T  7779821 aaccacaccaatacgaag--taa-gatgtgtggagcaaaggagagtggtaaccacc-aacaaagtgtgt---gcaagcaataatcaacaaaaacagcacc 7779913  T
Q  195 tagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||    
T  7779914 tagatctaatctaggaaacaagtg 7779937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 23200022 - 23200069
Alignment:
Q  168 gcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| | |||||||||||||||||||||||||    
T  23200022 gcaagcaataatcaacaataaaacacctagatctaatctaggaaacaa 23200069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 801419 - 801321
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac--cacctagatctaatctaggaaacaa 215  Q
    |||||||||||||| | ||| ||| |||||||| ||| ||||||| |   |||||||| || |||||| | ||  |||||||||||||||||||||||||    
T  801419 atgatgtgtggagcaaaggaaagtagtaaccac-taataaagtgtgt---gcaagcaataatcaacaaaaaacagcacctagatctaatctaggaaacaa 801324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 5257983 - 5258073
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaata-caccacctagatctaatctaggaa 211  Q
    |||||||||||||| | ||| ||| |||||||  |||||||||| ||   |||||||| || |||||||| || |||||||||||||||||||||    
T  5257983 atgatgtgtggagcaaaggaaagtagtaaccaa-taacaaagtgaat---gcaagcaataatcaacaataacagcacctagatctaatctaggaa 5258073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 23197822 - 23197870
Alignment:
Q  167 agcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaa 215  Q
    ||||||||| || |||||||| | ||| |||||||||||||||||||||    
T  23197822 agcaagcaataatcaacaataaaacacatagatctaatctaggaaacaa 23197870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 60 - 218
Target Start/End: Complemental strand, 10593652 - 10593494
Alignment:
Q  60 tctgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaag 159  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10593652 tctgttgtgtatccccgtatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 10593553  T
Q  160 tgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10593552 tgtattgtgcaagcaacaaacaacaaaacaccacctagatctaatctaggaaacaagtg 10593494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 25078513 - 25078357
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||  | |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||     
T  25078513 tgttgtgaatccccaaacctccaaggccggatcgaaccacaccaatacaaagaagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 25078414  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25078413 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 25078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 25136482 - 25136326
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||  | |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||     
T  25136482 tgttgtgaatccccaaacctccaaggccggatcgaaccacaccaatacaaagaagaatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 25136383  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25136382 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 25136326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 40380483 - 40380327
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  40380483 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 40380384  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  40380383 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 40380327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 16544804 - 16544647
Alignment:
Q  62 tgttgtgaatccccggatctccaag-atcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    |||||||||||||||   ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  16544804 tgttgtgaatccccgagcctccaaggaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 16544705  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  16544704 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtg 16544647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 61 - 218
Target Start/End: Complemental strand, 40382695 - 40382538
Alignment:
Q  61 ctgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||   |||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  40382695 ctgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcggcggagagtggtaaccaccaaacaaagt 40382596  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  40382595 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 40382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 16547026 - 16546869
Alignment:
Q  62 tgttgtgaatccccggatctccaag-atcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    |||||||||||||||   ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||     
T  16547026 tgttgtgaatccccgagcctccaaggaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtgataaccaccaaacaaagc 16546927  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  16546926 ttattgagcaagcaagaaacaacaaaacaccacctaaatccaatctaggaaacaagtg 16546869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 218
Target Start/End: Original strand, 22536100 - 22536224
Alignment:
Q  88 tcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaa-caaagtgtattgagcaagcaagaaacaacaat 186  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||| || ||||||||||   |||||||| || ||||||     
T  22536100 tcggatcgaaccacaccaatacaaagaat---gatgtgtggagcgacggagagcggtaaccaccaaagcaaagtgtat---gcaagcaacaatcaacaa- 22536192  T
Q  187 acaccacctagatctaatctaggaaacaagtg 218  Q
    | | ||||||||||||||||||||||||||||    
T  22536193 aaaacacctagatctaatctaggaaacaagtg 22536224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 29720721 - 29720598
Alignment:
Q  93 tcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacacca 192  Q
    |||||||||||||||||||  |||| || |||||||||| | ||||||||||||||||| |||||||||| |  | ||||||| || |||||| ||||||    
T  29720721 tcgaaccacaccaatacaagaaata-tgttgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgtgta-caagcaataatcaacaaaacacca 29720624  T
Q  193 cctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||    
T  29720623 cctagatctaatctaggaaacaagtg 29720598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 29750969 - 29751093
Alignment:
Q  92 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacacc 191  Q
    ||||||||||||||||||||  |||| ||||||||||||| | ||||||||||||||||| ||||| |||| | | |||||||| || |||||| |||||    
T  29750969 atcgaaccacaccaatacaagaaata-tgatgtgtggagcaaaggagagtggtaaccaccaaacaatgtgtgt-gtgcaagcaataatcaacaaaacacc 29751066  T
Q  192 acctagatctaatctaggaaacaagtg 218  Q
    |||||||| |||||||| |||||||||    
T  29751067 acctagatataatctagaaaacaagtg 29751093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 29722881 - 29722758
Alignment:
Q  93 tcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacacca 192  Q
    |||||||||||||||||||  |||| || |||||||||| | | ||||||||||||||| |||||||||| |  | ||||||| || |||||| ||||||    
T  29722881 tcgaaccacaccaatacaagaaata-tggtgtgtggagcaaagtagagtggtaaccaccaaacaaagtgtgtgta-caagcaataatcaacaaaacacca 29722784  T
Q  193 cctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||    
T  29722783 cctagatctaatctaggaaacaagtg 29722758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 9789042 - 9789157
Alignment:
Q  96 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacct 195  Q
    |||||||||||||||||| ||   |||||||||||| | ||| ||| ||||||||| |||||||||| |   |||||||| || |||||| ||| |||||    
T  9789042 aaccacaccaatacaaagtat---gatgtgtggagcaaaggaaagtagtaaccacc-aacaaagtgtgt---gcaagcaaaaatcaacaaaacagcacct 9789134  T
Q  196 agatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||| |||||    
T  9789135 agatctaatctaggaaagaagtg 9789157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 218
Target Start/End: Original strand, 18441462 - 18441577
Alignment:
Q  96 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacct 195  Q
    ||||||||||||||||||  ||| |||||||||||| | ||| ||| ||||||||| |||||||||| |   |||||||| || |||||| ||| |||||    
T  18441462 aaccacaccaatacaaag--taa-gatgtgtggagcaaaggaaagtagtaaccacc-aacaaagtgtgt---gcaagcaataatcaacaaaacagcacct 18441554  T
Q  196 agatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||| |||||    
T  18441555 agatctaatctaggaaagaagtg 18441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 16409824 - 16409714
Alignment:
Q  99 cacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaata-caccacctag 197  Q
    ||||||||||||||| ||   |||||||||||| | ||| ||| |||||||| ||||||||||  |   |||||||| || |||||||| || |||||||    
T  16409824 cacaccaatacaaagtat---gatgtgtggagcaaaggaaagtagtaaccac-taacaaagtgggt---gcaagcaataatcaacaataacaacacctag 16409732  T
Q  198 atctaatctaggaaacaa 215  Q
    ||||||||||||||||||    
T  16409731 atctaatctaggaaacaa 16409714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 26438031 - 26437996
Alignment:
Q  27 aaaagaacaaccttgttggaatcatatccaaaatct 62  Q
    |||||||||||||||||||||||||| |||||||||    
T  26438031 aaaagaacaaccttgttggaatcatacccaaaatct 26437996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 26451400 - 26451365
Alignment:
Q  27 aaaagaacaaccttgttggaatcatatccaaaatct 62  Q
    |||||||||||||||||||||||||| |||||||||    
T  26451400 aaaagaacaaccttgttggaatcatacccaaaatct 26451365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 13343389 - 13343299
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaata-caccacctagatctaatctaggaa 211  Q
    |||||||||||||| | ||| ||| |||||||  |||||||||| ||   |||||||| || |||||||| || |||||||||||||||||||||    
T  13343389 atgatgtgtggagcaaaggaaagtagtaaccaa-taacaaagtgaat---gcaagcaataatcaacaataacaacacctagatctaatctaggaa 13343299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 30182917 - 30182823
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||||||||| | ||| ||| |||||||  |||||||||| ||   |||| ||| || |||||||| || |||||||||||||||||||||||||    
T  30182917 atgatgtgtggagcaaaggaaagtagtaaccaa-taacaaagtgaat---gcaaacaataatcaacaataacaacacctagatctaatctaggaaacaa 30182823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 6e-67; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 6027638 - 6027482
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  6027638 tgttgtgaatccccggatctccaagactggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagaggggtaaccacctaacaaggtg 6027539  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  6027538 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 6027482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 13154308 - 13154151
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13154308 tgttgtgaatcctcggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 13154209  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13154208 ttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtg 13154151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 33341878 - 33342035
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  33341878 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 33341977  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  33341978 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 33342035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 25421698 - 25421542
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  25421698 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 25421599  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  25421598 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 25421542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 34165251 - 34165095
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||     
T  34165251 tgttgtgaatccccgaacctccaaggtccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaaccaagc 34165152  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  34165151 ttattgagcaagcaagaaacaacaa-acaccacctagatccaatctaggaaacaagtg 34165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 61 - 218
Target Start/End: Complemental strand, 34167473 - 34167316
Alignment:
Q  61 ctgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      
T  34167473 ctgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaaaa 34167374  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||| ||||||||| |||||||||||||| |||||||||| ||||||    
T  34167373 atattgagcaagcaaaaaacaacaaaacaccacctagatcaaatctaggaaccaagtg 34167316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 62 - 199
Target Start/End: Original strand, 6136079 - 6136216
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  6136079 tgttgtgaatccccggacctccaaggccggatcgaaccataccaatacaaagaataatgatgtgtggagcaacggagagtggtaaccaccaaacaaagtg 6136178  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagat 199  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  6136179 tattgtgcaagcaagaaacaacaaaacaccacctagat 6136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 62 - 174
Target Start/End: Complemental strand, 13159164 - 13159051
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  13159164 tgttgtgaatcctcggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 13159065  T
Q  161 gtattgagcaagca 174  Q
     |||||||||||||    
T  13159064 ttattgagcaagca 13159051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 16555228 - 16555106
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| |||||||||| |   |||||||| ||||||||| ||||    
T  16555228 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16555134  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  16555133 cacctagatctaatctaggaaacaagtg 16555106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 16578327 - 16578449
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| |||||||||| |   |||||||| ||||||||| ||||    
T  16578327 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16578421  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  16578422 cacctagatctaatctaggaaacaagtg 16578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 16617053 - 16616931
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| |||||||||| |   |||||||| ||||||||| ||||    
T  16617053 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16616959  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  16616958 cacctagatctaatctaggaaacaagtg 16616931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 16631784 - 16631662
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| |||||||||| |   |||||||| ||||||||| ||||    
T  16631784 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16631690  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  16631689 cacctagatctaatctaggaaacaagtg 16631662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 16653471 - 16653349
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||| |||||||||| |   |||||||| ||||||||| ||||    
T  16653471 gatcgaaccacaccaatactaa--ataatgatgtgtggagccaaggagagtggtaaccaccaaacaaagtgtgt---gcaagcaacaaacaacaaaacac 16653377  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  16653376 cacctagatctaatctaggaaacaagtg 16653349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 27648210 - 27648088
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    |||||||||||||||||||||     ||||||||||||||| | ||||||||||||||||| |||||||||| | | |||||||| || |||||| ||||    
T  27648210 gatcgaaccacaccaatacaag----aatgatgtgtggagcaaaggagagtggtaaccaccgaacaaagtgtgt-gtgcaagcaataatcaacaaaacac 27648116  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  27648115 cacctagatctaatctaggaaacaagtg 27648088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 2171366 - 2171456
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaata-caccacctagatctaatctaggaa 211  Q
    |||||||||||||| | ||| ||| |||||||| ||||||||||| |   |||||||| || |||||||| || |||||||||||||||||||||    
T  2171366 atgatgtgtggagcaaaggaaagtagtaaccac-taacaaagtgtgt---gcaagcaataatcaacaataacagcacctagatctaatctaggaa 2171456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 6e-67; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 13655805 - 13655961
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||     
T  13655805 tgttgtgaatccccggacctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacagagta 13655904  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13655905 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 13655961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 12647162 - 12647318
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  12647162 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 12647261  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12647262 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 12647318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 6267023 - 6266926
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagt 217  Q
    |||||||||||||| | ||||||||||||||||| |||||||||   || | |||||| || |||||| ||| |||||||||||||||||||||| ||||    
T  6267023 atgatgtgtggagcaaaggagagtggtaaccaccaaacaaagtg---tgtgtaagcaaaaatcaacaaaacaacacctagatctaatctaggaaagaagt 6266927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 32289916 - 32289803
Alignment:
Q  96 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaata-caccacc 194  Q
    ||||||||||||||||||  ||| |||||||||||| | ||| ||| |||||||| ||||||||||  |   |||||||| || |||||||| || ||||    
T  32289916 aaccacaccaatacaaag--taa-gatgtgtggagcaaaggaaagtagtaaccac-taacaaagtgggt---gcaagcaataatcaacaataacaacacc 32289824  T
Q  195 tagatctaatctaggaaacaa 215  Q
    |||||||||||||||||||||    
T  32289823 tagatctaatctaggaaacaa 32289803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 4484213 - 4484261
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  4484213 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaa 4484261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 4503018 - 4503066
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  4503018 gcaagcaataatcaacaataacagcacctagatctaatctaggaaacaa 4503066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 30833631 - 30833583
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  30833631 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaa 30833583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 15290917 - 15290760
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15290917 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 15290818  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  15290817 ttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtg 15290760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 15471286 - 15471129
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15471286 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagc 15471187  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  15471186 ttattgagcaagcaagaaacaacaatacaccacctagatcgaatctaggaaccaagtg 15471129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 42575100 - 42575257
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    |||||||||||||||   |||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||     
T  42575100 tgttgtgaatccccgagcctccaagacccggatcgaaccacaccaatacaaactataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 42575199  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  42575200 ttattgagcaagcaagaaacaacaaaacaccacctagatccaatctaggaaacaagtg 42575257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 25690313 - 25690190
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||||||||||   |||||||||||| | ||||||||||||||||| |||||||||| | | ||||||||||| |||||| ||||    
T  25690313 gatcgaaccacaccaatacaaagaat---gatgtgtggagcaaaggagagtggtaaccaccaaacaaagtgtgt-gtgcaagcaagaatcaacaaaacac 25690218  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  25690217 cacctagatctaatctaggaaacaagtg 25690190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 3439861 - 3439738
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||| |||||||||| |||||||||| |   |||||||| || |||||| ||||    
T  3439861 gatcgaaccacaccaatactaaaaa-aatgatgtgtggagcgacggagagcggtaaccaccaaacaaagtgtgt---gcaagcaacaatcaacaaaacac 3439766  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  3439765 cacctagatctaatctaggaaacaagtg 3439738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 218
Target Start/End: Complemental strand, 2628087 - 2627970
Alignment:
Q  96 aaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaa-caacaata-caccac 193  Q
    ||||||||||||||||||  ||| |||||||||||| | ||| ||| |||||||| ||||||||||  |   |||||||| ||| |||||||| || |||    
T  2628087 aaccacaccaatacaaag--taa-gatgtgtggagcaaaggaaagtagtaaccac-taacaaagtgggt---gcaagcaaaaaatcaacaataacaacac 2627995  T
Q  194 ctagatctaatctaggaaacaagtg 218  Q
    |||||||||||||||||||||||||    
T  2627994 ctagatctaatctaggaaacaagtg 2627970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 31218540 - 31218492
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  31218540 gcaagcaataatcaacaataacagcacctagatctaatctaggaaacaa 31218492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 61 - 218
Target Start/End: Original strand, 18388535 - 18388692
Alignment:
Q  61 ctgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    |||||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18388535 ctgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 18388634  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18388635 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 18388692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 18391972 - 18392128
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||     
T  18391972 tgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacagagagtggtaaccaccgaacaaagtt 18392071  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18392072 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 18392128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 61 - 218
Target Start/End: Original strand, 1560440 - 1560597
Alignment:
Q  61 ctgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  1560440 ctgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacagagt 1560539  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  1560540 atattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 1560597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 61 - 218
Target Start/End: Original strand, 32060097 - 32060254
Alignment:
Q  61 ctgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    |||||||||||||||| | |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32060097 ctgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatataaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagt 32060196  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  32060197 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 32060254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 6592116 - 6592272
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  6592116 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 6592215  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  6592216 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 6592272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 6594334 - 6594490
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||   |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  6594334 tgttgtgaatccccgagcctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 6594433  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  6594434 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 6594490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 20344255 - 20344131
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaa---acaacaata 187  Q
    ||||||||||||||||| ||||||||   |||||||||||| | ||||||||||||||||| |||||||||   || |||||||| ||   |||| ||      
T  20344255 gatcgaaccacaccaatgcaaagaat---gatgtgtggagcaaaggagagtggtaaccaccaaacaaagtg---tgtgcaagcaacaatcgacaaaaaac 20344162  T
Q  188 caccacctagatctaatctaggaaacaagtg 218  Q
    || ||||||||||||||||||||||||||||    
T  20344161 cagcacctagatctaatctaggaaacaagtg 20344131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 24790333 - 24790240
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaaca 214  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||    | ||||| || || |||||| ||||||||||||||||||||||||||||    
T  24790333 atgatgtgtggagcaacggaaagtggtaaccaccaaacaaagtg---cgtgcaagtaataatcaacaaaacaccacctagatctaatctaggaaaca 24790240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 43503991 - 43504080
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaa 211  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||  || |||||||| || |||||  | | || ||||||||||||||||||    
T  43503991 atgatgtgtggagcaaaggagagtggtaaccacc-aacaaagtgt-gtgtgcaagcaataatcaaca--aaaacagctagatctaatctaggaa 43504080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 39731654 - 39731606
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  39731654 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaa 39731606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 61 - 218
Target Start/End: Complemental strand, 44204025 - 44203868
Alignment:
Q  61 ctgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44204025 ctgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagt 44203926  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44203925 ttattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 44203868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 218
Target Start/End: Complemental strand, 9036775 - 9036652
Alignment:
Q  91 gatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacac 190  Q
    ||||||||||||||||| ||||| ||   |||||||||||| | ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| ||||    
T  9036775 gatcgaaccacaccaatgcaaaggat---gatgtgtggagctaaggagagtggtaaccaccaaacaaagtgt-ttgtgcaagcaacaaacaacaaaacac 9036680  T
Q  191 cacctagatctaatctaggaaacaagtg 218  Q
    ||||||||||||||||||||||||||||    
T  9036679 cacctagatctaatctaggaaacaagtg 9036652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 9987558 - 9987436
Alignment:
Q  92 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacacc 191  Q
    |||||||||||||||||| || |||| ||||||||||||| | ||||||||||||||||| | |||||||| |   |||||||| || |||||| |||||    
T  9987558 atcgaaccacaccaatacgaaaaata-tgatgtgtggagcaaaggagagtggtaaccaccaatcaaagtgtgt---gcaagcaataatcaacaaaacacc 9987463  T
Q  192 acctagatctaatctaggaaacaagtg 218  Q
    |||||||||||||||||||||||||||    
T  9987462 acctagatctaatctaggaaacaagtg 9987436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 21054314 - 21054192
Alignment:
Q  92 atcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacacc 191  Q
    ||||||||||||||||||||  |||| ||||||||||||| | ||||||||||||||||| ||| |||||| |   |||||||| || |||||| |||||    
T  21054314 atcgaaccacaccaatacaagaaata-tgatgtgtggagcaaaggagagtggtaaccaccaaactaagtgtgt---gcaagcaataatcaacaaaacacc 21054219  T
Q  192 acctagatctaatctaggaaacaagtg 218  Q
    |||||||||||||||||||||||||||    
T  21054218 acctagatctaatctaggaaacaagtg 21054192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 40282711 - 40282611
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaa-caaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaag 216  Q
    |||||||||||||| | ||||||||||||||||| || |||||||| | | |||||||| || |||||| ||||||||||||||||||||||||||||||    
T  40282711 atgatgtgtggagcaaaggagagtggtaaccaccaaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaag 40282613  T
Q  217 tg 218  Q
    ||    
T  40282612 tg 40282611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 218
Target Start/End: Original strand, 20622072 - 20622171
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagt 217  Q
    |||||||||||||| | ||| ||| ||||||||| |||||||||| | | |||||||| || |||||| |||||||||||||||||||||||||||||||    
T  20622072 atgatgtgtggagcaaaggaaagtagtaaccaccaaacaaagtgtgt-gtgcaagcaataatcaacaaaacaccacctagatctaatctaggaaacaagt 20622170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 51765682 - 51765634
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  51765682 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaa 51765634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 62 - 218
Target Start/End: Original strand, 2380 - 2536
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  2380 tgttgtgaatccccgagcctccaaggtcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 2479  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2480 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaacaagtg 2536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 6667 - 6511
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||     
T  6667 tgttgtgaatccccgagtctccaagaccggatcgaaccacaccaatacaaagaataatgatatgtggagcgacggagagtggtaaccaccaaacaaagtt 6568  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6567 tattgtgcaagcaagaaacaacaatacaccacctagatccaatctaggaaacaagtg 6511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 1e-64; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 8395996 - 8395840
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  8395996 tgttgtgaatccccggacctccaagaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagtt 8395897  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  8395896 tattgtgcaagcaaaaaacaacaaaacaccacctagatctaatctaggaaccaagtg 8395840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 7123075 - 7122919
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  7123075 tgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 7122976  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  7122975 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 7122919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 8393787 - 8393631
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||     
T  8393787 tgttgtgaatccccggacctcaaagaccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacgaagtt 8393688  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8393687 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 8393631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 7125294 - 7125138
Alignment:
Q  62 tgttgtgaatccccggatctccaagatcggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtg 161  Q
    ||||||||||||||| | |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  7125294 tgttgtgaatccccgaacctccaaggccggatcgaaccacaccaatataaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtt 7125195  T
Q  162 tattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  7125194 tattgtgcaagcaagaaacaacaaaacaccacctagatctaatctaggaaccaagtg 7125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 61 - 218
Target Start/End: Complemental strand, 5138685 - 5138528
Alignment:
Q  61 ctgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaag 159  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5138685 ctgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaag 5138586  T
Q  160 tgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
      |||||||||||||||| ||||||| ||| || |||||||||||||||||| ||||||    
T  5138585 cttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtg 5138528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 62 - 218
Target Start/End: Complemental strand, 5136459 - 5136303
Alignment:
Q  62 tgttgtgaatccccggatctccaagatc-ggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagt 160  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  5136459 tgttgtgaatccccggacctccaagacccggatcgaaccacaccaatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccaaacaaagc 5136360  T
Q  161 gtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaagtg 218  Q
     |||||||||||||||| ||||||| ||| || |||||||||||||||||| ||||||    
T  5136359 ttattgagcaagcaagagacaacaaaacatca-ctagatctaatctaggaaccaagtg 5136303  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 31495143 - 31495238
Alignment:
Q  118 atgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaatctaggaaacaa 215  Q
    |||||||||||||| | ||| ||| ||||||| | |||||||||| | | |||||||| || |||||| ||| |||||||||||||||||||||||||    
T  31495143 atgatgtgtggagcaaaggaaagtagtaaccatc-aacaaagtgtgt-gtgcaagcaataatcaacaaaacagcacctagatctaatctaggaaacaa 31495238  T

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Target: scaffold1808 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 214 - 101
Alignment:
Q  105 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaat 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  214 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaat 115  T
Q  205 ctaggaaacaagtg 218  Q
    ||||||||||||||    
T  114 ctaggaaacaagtg 101  T

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Target: scaffold0674 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 3545 - 3658
Alignment:
Q  105 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccacctaacaaagtgtattgagcaagcaagaaacaacaatacaccacctagatctaat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  3545 aatacaaagaataatgatgtgtggagcgacggagagtggtaaccaccgaacaaagtttattgtgcaagcaagaaacaacaaaacaccacctagatctaat 3644  T
Q  205 ctaggaaacaagtg 218  Q
    ||||||||||||||    
T  3645 ctaggaaacaagtg 3658  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 8618 - 8666
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  8618 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaa 8666  T

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Target: scaffold0491; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 11044 - 11092
Alignment:
Q  168 gcaagcaagaaacaacaata-caccacctagatctaatctaggaaacaa 215  Q
    |||||||| || |||||||| || |||||||||||||||||||||||||    
T  11044 gcaagcaataatcaacaataacaacacctagatctaatctaggaaacaa 11092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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