View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8921_low_15 (Length: 689)
Name: NF8921_low_15
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8921_low_15 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 421; Significance: 0; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 168 - 675
Target Start/End: Complemental strand, 32849402 - 32848894
Alignment:
| Q |
168 |
atagatatagttttgtactaattgctacttgataatgtgg-acgaacagtggctgcttggtgaacctcgtgatctattttttcaagaatttcgctatttg |
266 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | | | || ||||||||||||||| |||||| | ||||||| |||||||||||||||| ||||| |
|
|
| T |
32849402 |
atagatatagttttgtactaattactacttgatgttctagtacaaacagtggctgcttgctgaaccccatgatctacattttcaagaatttcgcaatttg |
32849303 |
T |
 |
| Q |
267 |
cttcatttagagctcattcttccctggtttagattcaattctttgctcaacttgcttcaagaatgtcctatgcttcaagttctcatgattcaaaaggaca |
366 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
32849302 |
gttcgcctagagctcattcttccctggtttagattcaattatctgctcaacttgcttcaagaatgtcctatgcttcaagttctcatgattcaaaagaaca |
32849203 |
T |
 |
| Q |
367 |
aggttagtttaatccaaccttaatctggtctatatagatttgatgtgaaattaaccaaattttatacacaaactagaagttgcatctgaaaaccagtcat |
466 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32849202 |
aggttagtttaatccaaccttaatctggtctatatagatttgatgtgaaattaaccaaattttatacacaaactagaagttgcatctgaaaaccagtcat |
32849103 |
T |
 |
| Q |
467 |
ttgttgcctgcagaaatcttcaccaatttcaggatggcatccaaagcagattgttcctgattgtctcgtatcccacctaaccgttatagaatttaaagga |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32849102 |
ttgttgcctgcagaaatcttcaccaatttcaggatggcatccaaagcagattgttcctgattgtctcgtatcccacctaaccgttatagaatttaaagga |
32849003 |
T |
 |
| Q |
567 |
tttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaaggacttgttttaaagacattgattatttctgatatttccttgaaccaaa |
666 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
32849002 |
tttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaaggacttgttttaaagacattgattatctctgatatttccttgaaccaaa |
32848903 |
T |
 |
| Q |
667 |
gtaagaagt |
675 |
Q |
| |
|
||||||||| |
|
|
| T |
32848902 |
gtaagaagt |
32848894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 20 - 351
Target Start/End: Original strand, 4441812 - 4442145
Alignment:
| Q |
20 |
gacaaaacatttagtgttgagtggttcaacaaccaaggtaaattagtcttatgttagttatttgaagtttgcttcatcatttatatagagtaagttagta |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |
|
|
| T |
4441812 |
gacaaaacatttagtgttgagtggttcaacaaccaaggtaaattagtcttatgttagttatttgatgtttgctttatcatatatatagagtaagttagta |
4441911 |
T |
 |
| Q |
120 |
actaactaacgaaaaattatatctttactaatcatgatttctttatag--atagatatagttttgtactaattgctacttgataatgtggacgaacagtg |
217 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4441912 |
actaactaacgaaaagttatatctctactaatcatgatttctttatagatatatatatagttttgtactaattgctacttgataatgtggacgaacagtg |
4442011 |
T |
 |
| Q |
218 |
gctgcttggtgaacctcgtgatctattttttcaagaatttcgctatttgcttcatttagagctcattcttccctggtttagattcaattctttgctcaac |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | |||| | |
|
|
| T |
4442012 |
gctgcttggtgaacctcgtgatctattttttcaagaatttcgctatttgcttcatttagagctcattcttccctggtttaactccaattatctgctttcc |
4442111 |
T |
 |
| Q |
318 |
ttgcttcaagaatgtcctatgcttcaagttctca |
351 |
Q |
| |
|
||||||||| |||||||| |||| |||||||||| |
|
|
| T |
4442112 |
ttgcttcaaaaatgtcctgtgctacaagttctca |
4442145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 163 - 431
Target Start/End: Original strand, 17478260 - 17478528
Alignment:
| Q |
163 |
tatagatagatatagttttgtactaattgctacttgataatgtggacgaacagtggctgcttggtgaacctcgtgatctattttttcaagaatttcgcta |
262 |
Q |
| |
|
|||||||||||||| ||||||||||||| || ||| | || || |||||||||||||||||||||| | ||||| ||||||||||||||| ||| |
|
|
| T |
17478260 |
tatagatagatatatttttgtactaattagtagttggtgtcttgtacaaacagtggctgcttggtgaaccccacaatctactttttcaagaatttcacta |
17478359 |
T |
 |
| Q |
263 |
tttgcttcatttagagctcattcttccctggtttagattcaattctttgctcaacttgcttcaagaatgtcctatgcttcaagttctcatgattcaaaag |
362 |
Q |
| |
|
|||| | | | ||||||||||||||| |||||||| | ||||||| |||||| ||||||||| ||||||| ||||| |||||||| || ||||| || |
|
|
| T |
17478360 |
tttgatacgtctagagctcattcttctctggtttaactccaattctctgctcagcttgcttcagaaatgtccgatgctgcaagttcttataattcagaac |
17478459 |
T |
 |
| Q |
363 |
gacaaggttagtttaatccaaccttaatctggtctatatagatttgatgtgaaattaaccaaattttat |
431 |
Q |
| |
|
||||||||| || ||||| || ||||||||| ||||| || |||||||||||||||||||| |||||| |
|
|
| T |
17478460 |
gacaaggtttgtataatcgaagcttaatctgctctatctaattttgatgtgaaattaaccaatttttat |
17478528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 518 - 656
Target Start/End: Complemental strand, 4427056 - 4426918
Alignment:
| Q |
518 |
tgttcctgattgtctcgtatcccacctaaccgttatagaatttaaaggatttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaa |
617 |
Q |
| |
|
||||||| ||||||||||||| |||||||| |||| |||||||||||||| | |||| | | |||||||| ||||||| |||| ||||||| |||||| |
|
|
| T |
4427056 |
tgttcctaattgtctcgtatcacacctaacttttattcaatttaaaggatttcgtggattttcagatgaggtgtcatttgctgagtatgttttacaaaaa |
4426957 |
T |
 |
| Q |
618 |
ggacttgttttaaagacattgattatttctgatatttcc |
656 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4426956 |
ggacttgttttaaagacattgattattgctgatatttcc |
4426918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 528 - 675
Target Start/End: Original strand, 4442373 - 4442523
Alignment:
| Q |
528 |
tgtctcgtatcccacctaaccgttatagaatttaaaggatttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaaggacttgttt |
627 |
Q |
| |
|
|||||||||||||| || ||| |||| |||||||||||||| ||||| || |||||||| |||||||||||||||||||||||| ||||| | |||| |
|
|
| T |
4442373 |
tgtctcgtatcccatctgacctttattcaatttaaaggatttttaggattaccagatgaggtgtcatttgttgagcatgttttgcaagaaggattggttt |
4442472 |
T |
 |
| Q |
628 |
taaagac---attgattatttctgatatttccttgaaccaaagtaagaagt |
675 |
Q |
| |
|
||||||| | |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4442473 |
taaagacaataatgattatttctgatatttccttagaccaaagtaagaagt |
4442523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 519 - 644
Target Start/End: Original strand, 17478687 - 17478812
Alignment:
| Q |
519 |
gttcctgattgtctcgtatcccacctaaccgttatagaatttaaaggatttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaag |
618 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||| ||||||||||| | |||||| ||| |||||||| |||||||| ||| ||||||||||||| | |
|
|
| T |
17478687 |
gttcctgattgtctcgtatcccacctgacctttattcaatttaaaggactgcgaggatttccagatgaggtgtcatttgtcgagtatgttttgcaaaatg |
17478786 |
T |
 |
| Q |
619 |
gacttgttttaaagacattgattatt |
644 |
Q |
| |
|
||||||||||||| ||| |||||||| |
|
|
| T |
17478787 |
gacttgttttaaaaacaatgattatt |
17478812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 518 - 640
Target Start/End: Complemental strand, 29585309 - 29585187
Alignment:
| Q |
518 |
tgttcctgattgtctcgtatcccacctaaccgttatagaatttaaaggatttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaa |
617 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||| ||||||||| |||| ||||| ||| |||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
29585309 |
tgttcctaattgtctcgtatcccaccttacctttattcaatttaaagaatttcaaggatttccagatgaggtgtcatttgttgagcttgttttgcaaaaa |
29585210 |
T |
 |
| Q |
618 |
ggacttgttttaaagacattgat |
640 |
Q |
| |
|
||||| |||||| ||||| |||| |
|
|
| T |
29585209 |
ggactcgttttagagacaatgat |
29585187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 655
Target Start/End: Original strand, 4432774 - 4432911
Alignment:
| Q |
518 |
tgttcctgattgtctcgtatcccacctaaccgttatagaatttaaaggatttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaa |
617 |
Q |
| |
|
||||||| ||||| ||||||| |||||||| |||| | ||||||||||||| |||| ||| |||||| | | ||||| |||| || || |||||||| |
|
|
| T |
4432774 |
tgttcctaattgtatcgtatcacacctaacttttattcagtttaaaggatttaaaggagttccagatgagctattatttgctgagtatattctgcaaaaa |
4432873 |
T |
 |
| Q |
618 |
ggacttgttttaaagacattgattatttctgatatttc |
655 |
Q |
| |
|
||||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
4432874 |
ggacttgttttgaagacaatgattattgatgatatttc |
4432911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 376
Target Start/End: Complemental strand, 4427313 - 4427238
Alignment:
| Q |
301 |
tcaattctttgctcaacttgcttcaagaatgtcctatgcttcaagttctcatgattcaaaaggacaaggttagttt |
376 |
Q |
| |
|
|||||||| | || |||||||||||| | ||||||||||||||||||||||| ||||| || ||||||||| |||| |
|
|
| T |
4427313 |
tcaattctgtactgaacttgcttcaaaagtgtcctatgcttcaagttctcataattcataacgacaaggtttgttt |
4427238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 648
Target Start/End: Complemental strand, 20513275 - 20513231
Alignment:
| Q |
604 |
atgttttgcaaaaaggacttgttttaaagacattgattatttctg |
648 |
Q |
| |
|
||||||||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
20513275 |
atgttttgcaaaatggacttgttttaaagaaaatgattatttctg |
20513231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 604 - 645
Target Start/End: Original strand, 24935600 - 24935641
Alignment:
| Q |
604 |
atgttttgcaaaaaggacttgttttaaagacattgattattt |
645 |
Q |
| |
|
||||||||||||| ||||||||||| |||||| ||||||||| |
|
|
| T |
24935600 |
atgttttgcaaaatggacttgttttgaagacaatgattattt |
24935641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 103; Significance: 7e-51; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 163 - 349
Target Start/End: Complemental strand, 8382789 - 8382603
Alignment:
| Q |
163 |
tatagatagatatagttttgtactaattgctacttgataatgtggacgaacagtggctgcttggtgaacctcgtgatctattttttcaagaatttcgcta |
262 |
Q |
| |
|
|||||||| |||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||| || | |
|
|
| T |
8382789 |
tatagatatatatggttttgtactaattaatacttgacaatgcggacgaacagtggctgcttggtgaaccccgtgatctactttttcaagaattttgcaa |
8382690 |
T |
 |
| Q |
263 |
tttgcttcatttagagctcattcttccctggtttagattcaattctttgctcaacttgcttcaagaatgtcctatgcttcaagttct |
349 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||| | ||||||| | |||| ||||||||| |||||||||| |||| |||||| |
|
|
| T |
8382689 |
tttgcttcatttagatctcactcttccctggtttagctccaattctctcctcagcttgcttcacaaatgtcctattcttcgagttct |
8382603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 171 - 432
Target Start/End: Complemental strand, 8366778 - 8366519
Alignment:
| Q |
171 |
gatatagttttgtactaattgctacttgataatgtggacgaacagtggctgcttggtgaacctcgtgatctattttttcaagaatttcgctatttgcttc |
270 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||||| ||| ||||| |||||| |
|
|
| T |
8366778 |
gatatggttttgtactaattaatacttgacaatgcggacgaacagtggctgcttggtgaaccccgtgatctactttttcaagatttttgctatctgcttc |
8366679 |
T |
 |
| Q |
271 |
atttagagctcattcttccctggtttagattcaattctttgctcaacttgcttcaagaatgtcctatgcttcaagttctcatgattcaaaaggacaaggt |
370 |
Q |
| |
|
||||||| ||||||||||||||||| | ||||||| | |||| ||||||||| |||||||||| ||||| ||||| | |||||||| | ||||| |
|
|
| T |
8366678 |
atttagatatcattcttccctggtttgactccaattctcttctcagcttgcttcacaaatgtcctattcttcaggttcttaaaattcaaaattataaggt |
8366579 |
T |
 |
| Q |
371 |
tagtttaatccaaccttaatctggtctatatagatttgatgtgaaattaaccaaattttata |
432 |
Q |
| |
|
|||||||| || |||||| || || || | ||||||| |||||||||||||||||||| |
|
|
| T |
8366578 |
atgtttaatcaaagcttaatttgatc--tacaactttgatgcgaaattaaccaaattttata |
8366519 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 470 - 653
Target Start/End: Complemental strand, 8382410 - 8382227
Alignment:
| Q |
470 |
ttgcctgcagaaatcttcaccaatttcaggatggcatccaaagcagattgttcctgattgtctcgtatcccacctaaccgttatagaatttaaaggattt |
569 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| |||| ||| | || |||| ||||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
8382410 |
ttgcctgcagaaacagtcaccaattttaggatgggctccacagccaactgctcctaattgtctcgtatcccaccttacctttattgaatttaaaggattt |
8382311 |
T |
 |
| Q |
570 |
agaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaaggacttgttttaaagacattgattatttctgatatt |
653 |
Q |
| |
|
|||| | | | |||||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
8382310 |
cgaggtttttcagatgagatatcatttgttgaggatgttttgcaaaaaggacttgttttaaagacagtgattattgctgatatt |
8382227 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 486 - 675
Target Start/End: Complemental strand, 8366393 - 8366204
Alignment:
| Q |
486 |
tcaccaatttcaggatggcatccaaagcagattgttcctgattgtctcgtatcccacctaaccgttatagaatttaaaggatttagaggatctccggatg |
585 |
Q |
| |
|
|||||||||| ||||||| |||| ||| | || |||| |||||||||||||| |||| ||| |||| |||||||| |||| ||||| | | |||| |
|
|
| T |
8366393 |
tcaccaattttaggatgggctccacagccaagtgctcctaattgtctcgtatcctaccttacctttattcaatttaaaaaatttcaaggattttcagatg |
8366294 |
T |
 |
| Q |
586 |
aggtttcatttgttgagcatgttttgcaaaaaggacttgttttaaagacattgattatttctgatatttccttgaaccaaagtaagaagt |
675 |
Q |
| |
|
|| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||||| ||||||||| |
|
|
| T |
8366293 |
agataacatttattgagcatgttttgcaaaaaggacttgttttaaagacagtgattattgctgatatttctctggaccaaggtaagaagt |
8366204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 593 - 675
Target Start/End: Complemental strand, 46839783 - 46839701
Alignment:
| Q |
593 |
atttgttgagcatgttttgcaaaaaggacttgttttaaagacattgattatttctgatatttccttgaaccaaagtaagaagt |
675 |
Q |
| |
|
|||||||||| || ||||| |||||||||||||||| |||||| |||||||| ||||||||| ||| ||| ||||||||||| |
|
|
| T |
46839783 |
atttgttgagtatattttgaaaaaaggacttgttttgaagacaatgattattgatgatatttcattggacctaagtaagaagt |
46839701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 8382901 - 8382806
Alignment:
| Q |
22 |
caaaacatttagtgttgagtggttcaacaaccaaggtaaattagtcttatgttagttatttgaagtttgcttcatcatttatatagagtaagttagtaa |
120 |
Q |
| |
|
|||||||| |||| ||||||| ||||||||||||||| || || |||| |||||||||||| |||| |||||| |||||||| | |||||||||||| |
|
|
| T |
8382901 |
caaaacatctagttttgagtgattcaacaaccaaggttaa---gttttattttagttatttgatgtttacttcataatttatatggtgtaagttagtaa |
8382806 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 8366904 - 8366821
Alignment:
| Q |
20 |
gacaaaacatttagtgttgagtggttcaacaaccaaggtaaattagtcttatgttagttatttgaagtttgcttcatcatttatata |
106 |
Q |
| |
|
|||||||||| |||| ||||| | ||||||||||||||| ||||| |||| | ||||||||| |||| |||||||||||||||| |
|
|
| T |
8366904 |
gacaaaacatctagttttgagagtttcaacaaccaaggt---ttagttttatttcagttatttgttgtttacttcatcatttatata |
8366821 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 520 - 659
Target Start/End: Original strand, 8341710 - 8341849
Alignment:
| Q |
520 |
ttcctgattgtctcgtatcccacctaaccgttatagaatttaaaggatttagaggatctccggatgaggtttcatttgttgagcatgttttgcaaaaagg |
619 |
Q |
| |
|
||||| ||||||| ||||||||||| | | |||| ||||||||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
8341710 |
ttcctaattgtcttgtatcccacctgagctttattgaatttaaaggatttcgaggatttccagatgaggtttcatttgttgagtatgttttgcaaaatgg |
8341809 |
T |
 |
| Q |
620 |
acttgttttaaagacattgattatttctgatatttccttg |
659 |
Q |
| |
|
|| |||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
8341810 |
acatgttttaaagacgttgattattgctgatatttccttg |
8341849 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 164 - 399
Target Start/End: Original strand, 8341314 - 8341550
Alignment:
| Q |
164 |
atagatagatatagttttgtactaattgctacttgataatgtggacgaacagtggctgcttggtgaacctcgtgatctattttttcaagaatttcgctat |
263 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||| |||||||| | ||| | ||||||||||||||| ||| |
|
|
| T |
8341314 |
atagatagatatagttttgtactaattactacttgatatcgtgtacaaacagtggctgctaggtgaaccccatgagatgctttttcaagaatttcaatat |
8341413 |
T |
 |
| Q |
264 |
ttgcttcatttagagctcattcttccctggtttagattcaattctttgctcaacttgcttcaagaatgtcctatgcttcaagttctcatgattcaaaagg |
363 |
Q |
| |
|
||| ||| | |||||| ||||| ||||||||| | |||||| | ||| ||||| |||| ||||||| |||| ||| |||||| ||||| || | |
|
|
| T |
8341414 |
ttgattcgccttgagctcgttctttcctggtttaactcaaattctcttctccacttgattcagaaatgtcccttgctccaacctctcataattcagaatg |
8341513 |
T |
 |
| Q |
364 |
acaagg-ttagtttaatccaaccttaatctggtctat |
399 |
Q |
| |
|
|||||| || |||||||||| |||||| |||||||| |
|
|
| T |
8341514 |
acaaggtttcatttaatccaagcttaatttggtctat |
8341550 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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