View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8921_low_17 (Length: 683)

Name: NF8921_low_17
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8921_low_17
NF8921_low_17
[»] chr7 (52 HSPs)
chr7 (10-668)||(11242157-11242815)
chr7 (44-542)||(11268680-11269197)
chr7 (44-542)||(11281004-11281517)
chr7 (540-668)||(11268466-11268595)
chr7 (540-661)||(11281602-11281723)
chr7 (455-538)||(6847702-6847787)
chr7 (540-624)||(1864610-1864694)
chr7 (134-271)||(6847989-6848127)
chr7 (463-523)||(1941581-1941641)
chr7 (540-613)||(14925823-14925896)
chr7 (540-613)||(15349289-15349362)
chr7 (551-614)||(1941460-1941523)
chr7 (545-668)||(6847488-6847608)
chr7 (551-615)||(9046420-9046484)
chr7 (471-517)||(6712334-6712380)
chr7 (462-516)||(8787178-8787232)
chr7 (540-598)||(15523336-15523394)
chr7 (471-520)||(15061402-15061451)
chr7 (455-518)||(1751127-1751190)
chr7 (462-517)||(3376405-3376460)
chr7 (462-517)||(21005415-21005470)
chr7 (471-517)||(538157-538203)
chr7 (471-517)||(545031-545077)
chr7 (540-598)||(679216-679274)
chr7 (471-517)||(821389-821435)
chr7 (471-517)||(826402-826448)
chr7 (471-517)||(828413-828459)
chr7 (471-517)||(4158572-4158618)
chr7 (471-517)||(4466554-4466600)
chr7 (471-517)||(5840819-5840865)
chr7 (471-517)||(8713137-8713183)
chr7 (471-517)||(8718641-8718687)
chr7 (462-516)||(8780339-8780393)
chr7 (471-517)||(9004766-9004812)
chr7 (471-517)||(9009751-9009797)
chr7 (471-517)||(9258523-9258569)
chr7 (471-517)||(9311684-9311730)
chr7 (471-517)||(12548205-12548251)
chr7 (471-517)||(14229848-14229894)
chr7 (471-517)||(15916190-15916236)
chr7 (471-517)||(15924499-15924545)
chr7 (471-517)||(16330782-16330828)
chr7 (471-517)||(18389808-18389854)
chr7 (471-517)||(19014539-19014585)
chr7 (471-517)||(19364547-19364593)
chr7 (471-517)||(23203939-23203985)
chr7 (471-517)||(23510066-23510112)
chr7 (462-516)||(33609867-33609921)
chr7 (471-517)||(37100257-37100303)
chr7 (462-516)||(39388877-39388931)
chr7 (455-523)||(6531399-6531468)
chr7 (471-516)||(15066491-15066536)
[»] chr1 (39 HSPs)
chr1 (238-454)||(12727187-12727395)
chr1 (261-355)||(17735150-17735244)
chr1 (125-271)||(27318397-27318544)
chr1 (455-540)||(27318718-27318803)
chr1 (545-624)||(2130260-2130339)
chr1 (540-621)||(16527352-16527433)
chr1 (540-624)||(15421406-15421490)
chr1 (540-630)||(12726893-12726983)
chr1 (455-518)||(8236384-8236448)
chr1 (182-269)||(8236099-8236186)
chr1 (455-518)||(17734986-17735049)
chr1 (455-542)||(12727068-12727157)
chr1 (548-606)||(28553606-28553664)
chr1 (573-668)||(27318869-27318961)
chr1 (365-420)||(17735099-17735155)
chr1 (551-606)||(12788932-12788987)
chr1 (454-520)||(52755236-52755303)
chr1 (471-517)||(21924812-21924858)
chr1 (471-520)||(36850245-36850294)
chr1 (552-592)||(28553553-28553593)
chr1 (462-517)||(25727092-25727147)
chr1 (462-517)||(25735500-25735555)
chr1 (471-517)||(2386379-2386425)
chr1 (471-517)||(3985407-3985453)
chr1 (471-517)||(3990686-3990732)
chr1 (471-517)||(8649018-8649064)
chr1 (471-517)||(13250887-13250933)
chr1 (471-517)||(16485428-16485474)
chr1 (462-520)||(19788171-19788229)
chr1 (471-517)||(27047589-27047635)
chr1 (471-517)||(27911222-27911268)
chr1 (471-517)||(38045486-38045532)
chr1 (471-517)||(41802424-41802470)
chr1 (471-517)||(46143434-46143480)
chr1 (471-517)||(49379537-49379583)
chr1 (471-520)||(17986709-17986758)
chr1 (551-612)||(37627606-37627667)
chr1 (471-516)||(39286525-39286570)
chr1 (471-520)||(41461877-41461926)
[»] chr8 (37 HSPs)
chr8 (88-247)||(9798655-9798816)
chr8 (89-238)||(15201683-15201837)
chr8 (455-539)||(9798347-9798431)
chr8 (400-443)||(9798472-9798515)
chr8 (548-614)||(13539591-13539657)
chr8 (548-614)||(13684817-13684883)
chr8 (471-517)||(31469554-31469600)
chr8 (548-624)||(9798174-9798251)
chr8 (469-517)||(9317986-9318034)
chr8 (552-592)||(17315222-17315262)
chr8 (552-592)||(17337133-17337173)
chr8 (462-517)||(21319566-21319621)
chr8 (462-517)||(22285118-22285173)
chr8 (471-517)||(1685806-1685852)
chr8 (471-517)||(6570471-6570517)
chr8 (471-517)||(14351544-14351590)
chr8 (471-517)||(14878187-14878233)
chr8 (471-517)||(17126987-17127033)
chr8 (471-517)||(18264284-18264330)
chr8 (471-517)||(18273297-18273343)
chr8 (471-517)||(19997535-19997581)
chr8 (471-517)||(20038371-20038417)
chr8 (471-517)||(20044026-20044072)
chr8 (471-517)||(21103528-21103574)
chr8 (471-517)||(22370699-22370745)
chr8 (462-516)||(23503277-23503331)
chr8 (471-517)||(25751599-25751645)
chr8 (471-517)||(26854221-26854267)
chr8 (471-517)||(29325452-29325498)
chr8 (471-517)||(35996235-35996281)
chr8 (471-517)||(43836170-43836216)
chr8 (471-516)||(21105571-21105616)
chr8 (474-523)||(27933242-27933291)
chr8 (471-516)||(29003784-29003829)
chr8 (548-612)||(17337057-17337121)
chr8 (462-518)||(18008279-18008335)
chr8 (471-515)||(21939378-21939422)
[»] chr3 (51 HSPs)
chr3 (135-271)||(16999332-16999468)
chr3 (455-539)||(13832967-13833058)
chr3 (540-613)||(27992195-27992268)
chr3 (548-614)||(8890726-8890792)
chr3 (548-614)||(11271633-11271699)
chr3 (546-624)||(16998861-16998939)
chr3 (484-542)||(16999029-16999087)
chr3 (400-443)||(13833099-13833142)
chr3 (462-517)||(20225122-20225177)
chr3 (548-594)||(12881594-12881640)
chr3 (548-606)||(31139226-31139284)
chr3 (471-520)||(14071603-14071652)
chr3 (551-611)||(6461691-6461751)
chr3 (555-606)||(4864093-4864144)
chr3 (552-599)||(9762346-9762393)
chr3 (462-517)||(11399023-11399078)
chr3 (462-517)||(11827301-11827356)
chr3 (462-517)||(17041863-17041918)
chr3 (462-517)||(22038987-22039042)
chr3 (462-517)||(43496342-43496397)
chr3 (462-516)||(1993594-1993648)
chr3 (471-517)||(2781396-2781442)
chr3 (471-517)||(3279988-3280034)
chr3 (471-517)||(3338639-3338685)
chr3 (471-517)||(4768906-4768952)
chr3 (471-517)||(4830203-4830249)
chr3 (471-517)||(6710194-6710240)
chr3 (471-517)||(6809815-6809861)
chr3 (471-517)||(6815637-6815683)
chr3 (471-517)||(9360373-9360419)
chr3 (471-517)||(12246954-12247000)
chr3 (471-517)||(13087671-13087717)
chr3 (471-517)||(13093856-13093902)
chr3 (471-517)||(13418539-13418585)
chr3 (471-517)||(15425060-15425106)
chr3 (471-517)||(15430006-15430052)
chr3 (471-517)||(15854357-15854403)
chr3 (471-517)||(16385347-16385393)
chr3 (471-517)||(17023404-17023450)
chr3 (471-517)||(22164612-22164658)
chr3 (471-517)||(22169916-22169962)
chr3 (471-517)||(24697007-24697053)
chr3 (471-517)||(25055170-25055216)
chr3 (471-517)||(25765725-25765771)
chr3 (471-517)||(41473073-41473119)
chr3 (471-517)||(43841956-43842002)
chr3 (471-517)||(53354694-53354740)
chr3 (471-516)||(4365997-4366042)
chr3 (471-516)||(4383526-4383571)
chr3 (471-516)||(13098461-13098506)
chr3 (551-599)||(20487933-20487981)
[»] chr5 (39 HSPs)
chr5 (162-271)||(42687841-42687950)
chr5 (199-266)||(20684884-20684951)
chr5 (477-542)||(42687542-42687607)
chr5 (540-624)||(19222220-19222304)
chr5 (455-528)||(20055252-20055325)
chr5 (548-614)||(26069494-26069561)
chr5 (540-597)||(23029291-23029348)
chr5 (540-613)||(23114566-23114639)
chr5 (403-438)||(20055180-20055215)
chr5 (462-517)||(20738496-20738551)
chr5 (462-517)||(22948713-22948768)
chr5 (471-517)||(7761007-7761053)
chr5 (471-517)||(15732091-15732137)
chr5 (471-517)||(15736310-15736356)
chr5 (471-517)||(18613180-18613226)
chr5 (471-517)||(20595222-20595268)
chr5 (471-517)||(20790115-20790161)
chr5 (471-517)||(20795896-20795942)
chr5 (471-517)||(20832364-20832410)
chr5 (471-517)||(21734509-21734555)
chr5 (471-517)||(21812152-21812198)
chr5 (471-517)||(23435475-23435521)
chr5 (471-517)||(23446842-23446888)
chr5 (471-517)||(23618368-23618414)
chr5 (471-517)||(23685000-23685046)
chr5 (471-517)||(23849765-23849811)
chr5 (471-517)||(23973102-23973148)
chr5 (462-516)||(24165395-24165449)
chr5 (471-517)||(24935621-24935667)
chr5 (471-517)||(24941313-24941359)
chr5 (471-517)||(26848421-26848467)
chr5 (462-516)||(34223012-34223066)
chr5 (471-517)||(34780459-34780505)
chr5 (471-517)||(41765679-41765725)
chr5 (339-451)||(42687654-42687771)
chr5 (472-517)||(12410677-12410722)
chr5 (548-605)||(26266671-26266728)
chr5 (579-624)||(42687384-42687429)
chr5 (473-517)||(23771076-23771120)
[»] chr2 (25 HSPs)
chr2 (455-528)||(21511815-21511888)
chr2 (540-623)||(21511634-21511717)
chr2 (455-508)||(21516314-21516367)
chr2 (540-624)||(21516112-21516196)
chr2 (540-624)||(25592818-25592902)
chr2 (455-518)||(23482639-23482702)
chr2 (397-449)||(35406551-35406603)
chr2 (540-598)||(24371162-24371220)
chr2 (551-613)||(35406740-35406802)
chr2 (471-520)||(36684447-36684496)
chr2 (462-517)||(23340708-23340763)
chr2 (462-517)||(24507446-24507501)
chr2 (462-517)||(28496586-28496641)
chr2 (471-517)||(20172708-20172754)
chr2 (471-517)||(20282197-20282243)
chr2 (471-517)||(21468340-21468386)
chr2 (462-516)||(23698700-23698754)
chr2 (462-516)||(24366196-24366250)
chr2 (471-517)||(25358287-25358333)
chr2 (471-517)||(25370230-25370276)
chr2 (474-520)||(27745219-27745265)
chr2 (471-516)||(23139892-23139937)
chr2 (471-516)||(23551682-23551727)
chr2 (472-517)||(32140122-32140167)
chr2 (574-614)||(31603063-31603103)
[»] chr4 (42 HSPs)
chr4 (540-624)||(55268081-55268165)
chr4 (540-661)||(4743091-4743209)
chr4 (540-614)||(12634271-12634345)
chr4 (466-528)||(21276770-21276832)
chr4 (463-523)||(15048141-15048201)
chr4 (463-523)||(15106223-15106283)
chr4 (540-624)||(24493252-24493336)
chr4 (471-528)||(17464992-17465049)
chr4 (540-624)||(17465147-17465231)
chr4 (540-624)||(26493053-26493137)
chr4 (540-661)||(11377217-11377335)
chr4 (540-599)||(21276930-21276989)
chr4 (550-614)||(8898740-8898804)
chr4 (471-517)||(12347523-12347569)
chr4 (552-614)||(15154624-15154686)
chr4 (455-544)||(26493219-26493308)
chr4 (153-228)||(21276696-21276772)
chr4 (462-517)||(7197364-7197419)
chr4 (540-595)||(17169095-17169150)
chr4 (540-595)||(17174655-17174710)
chr4 (403-438)||(17464909-17464944)
chr4 (476-523)||(36709600-36709646)
chr4 (471-517)||(3371768-3371814)
chr4 (471-517)||(3419206-3419252)
chr4 (471-517)||(6518521-6518567)
chr4 (462-516)||(9857350-9857404)
chr4 (471-517)||(9945090-9945136)
chr4 (471-517)||(10631517-10631563)
chr4 (462-516)||(12808074-12808128)
chr4 (475-517)||(13883359-13883401)
chr4 (471-517)||(14653378-14653424)
chr4 (471-517)||(14690727-14690773)
chr4 (471-517)||(16683510-16683556)
chr4 (471-517)||(18078829-18078875)
chr4 (471-516)||(5717537-5717582)
chr4 (471-516)||(18080848-18080893)
chr4 (551-592)||(53000287-53000328)
chr4 (471-515)||(3392093-3392137)
chr4 (461-517)||(10731280-10731336)
chr4 (461-517)||(10945049-10945105)
chr4 (471-523)||(17295524-17295575)
chr4 (471-515)||(36654250-36654294)
[»] chr6 (22 HSPs)
chr6 (551-606)||(31817629-31817684)
chr6 (462-517)||(23523836-23523891)
chr6 (462-517)||(25964058-25964113)
chr6 (462-517)||(25968705-25968760)
chr6 (471-517)||(13168526-13168572)
chr6 (540-596)||(17756829-17756885)
chr6 (462-517)||(5399371-5399426)
chr6 (462-517)||(18396388-18396443)
chr6 (462-517)||(20218364-20218419)
chr6 (462-517)||(22112389-22112444)
chr6 (471-517)||(4188292-4188338)
chr6 (471-517)||(8603651-8603697)
chr6 (471-517)||(15700333-15700379)
chr6 (471-517)||(17743654-17743700)
chr6 (471-517)||(19075237-19075283)
chr6 (471-517)||(22005916-22005962)
chr6 (471-517)||(25786255-25786301)
chr6 (462-516)||(26138804-26138858)
chr6 (462-520)||(30245344-30245402)
chr6 (471-516)||(4741136-4741181)
chr6 (471-516)||(20993661-20993706)
chr6 (475-519)||(28973997-28974041)
[»] scaffold0094 (1 HSPs)
scaffold0094 (471-517)||(1802-1848)
[»] scaffold0197 (1 HSPs)
scaffold0197 (462-518)||(8716-8772)
[»] scaffold0031 (1 HSPs)
scaffold0031 (462-517)||(77972-78027)
[»] scaffold1092 (1 HSPs)
scaffold1092 (471-517)||(1572-1618)
[»] scaffold1058 (1 HSPs)
scaffold1058 (471-517)||(2949-2995)
[»] scaffold0855 (1 HSPs)
scaffold0855 (540-598)||(3777-3835)
[»] scaffold0847 (1 HSPs)
scaffold0847 (540-598)||(3942-4000)
[»] scaffold0816 (1 HSPs)
scaffold0816 (471-517)||(1223-1269)
[»] scaffold0673 (1 HSPs)
scaffold0673 (471-517)||(3107-3153)
[»] scaffold0624 (1 HSPs)
scaffold0624 (471-517)||(4830-4876)
[»] scaffold0607 (1 HSPs)
scaffold0607 (471-517)||(9658-9704)
[»] scaffold0489 (1 HSPs)
scaffold0489 (471-517)||(821-867)
[»] scaffold0230 (2 HSPs)
scaffold0230 (471-517)||(8887-8933)
scaffold0230 (471-517)||(16413-16459)
[»] scaffold0215 (1 HSPs)
scaffold0215 (471-517)||(32-78)
[»] scaffold0146 (1 HSPs)
scaffold0146 (471-517)||(38219-38265)
[»] scaffold0111 (1 HSPs)
scaffold0111 (471-517)||(34937-34983)
[»] scaffold0075 (1 HSPs)
scaffold0075 (471-517)||(19585-19631)
[»] scaffold0071 (2 HSPs)
scaffold0071 (471-517)||(32186-32232)
scaffold0071 (471-517)||(37132-37178)
[»] scaffold0035 (2 HSPs)
scaffold0035 (471-517)||(14471-14517)
scaffold0035 (471-517)||(49919-49965)
[»] scaffold0029 (2 HSPs)
scaffold0029 (471-517)||(117904-117950)
scaffold0029 (471-517)||(124148-124194)
[»] scaffold0022 (1 HSPs)
scaffold0022 (471-517)||(33274-33320)
[»] scaffold0004 (1 HSPs)
scaffold0004 (471-517)||(369403-369449)
[»] scaffold0168 (1 HSPs)
scaffold0168 (471-520)||(8741-8790)


Alignment Details
Target: chr7 (Bit Score: 593; Significance: 0; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 593; E-Value: 0
Query Start/End: Original strand, 10 - 668
Target Start/End: Original strand, 11242157 - 11242815
Alignment:
Q  10 aggagcagagaaattgaagaaaagnnnnnnnnnntgaatagttggaaaaacacacggtccttgctgaccatgtccaatattttaacacttggaagctgaa 109  Q
    ||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11242157 aggagcagagaaattgaagaaaagaaaaaaaaaatgaatagctggaaaaacacacggtccttgctgaccatgtccaatattttaacacttggaagctgaa 11242256  T
Q  110 aagtgcacgatccggagaccgtgtgtttttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatg 209  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11242257 aagtgcacgatccggagaccgtatgtttttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatg 11242356  T
Q  210 cattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11242357 cattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatcattttggaatcttgtgaacttgttttagattgaatcaaacttaacatt 11242456  T
Q  310 gttctaagtttattcttgcttttattttgtgcactttacattcttgaattttactttcttgttctttatatttatgcaatttatcttcaacaatttacat 409  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11242457 gttctaagtttattcttgattttattttgtgcactttacattcttgaatgttactttcttgttctttatatttatgcaatttatcttcagcaatttacat 11242556  T
Q  410 tcagtcatttacaattatacaatttatttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattc 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11242557 tcagtcatttacaattatacaatttatttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattc 11242656  T
Q  510 aaaccaagtttagatatcttttttgtttaaatttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcga 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11242657 aaaccaagtttagatatcttttttgtttaaatttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcga 11242756  T
Q  610 caagactacacaaaaaatgattatgaaaacacaccagatgaatagttttgtgcagtctt 668  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  11242757 caagactacacaaaaagtgattatggaaacacaccacatgaatagttttgtgcagtctt 11242815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 44 - 542
Target Start/End: Complemental strand, 11269197 - 11268680
Alignment:
Q  44 tgaatagttggaaaaacacacggtccttgctga-ccatgtccaatattttaacacttggaagctgaaaagtgcacgatccgg-----agaccgtgtgttt 137  Q
    ||||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | || |      || ||||| ||||    
T  11269197 tgaatagctggaaaaacacacggtccttgctaatccatgtccagtattttaacacttggaagctgaaaagtgcatggtctgctatgcaggccgtgcgttt 11269098  T
Q  138 ttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaat 237  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||| | |||||||| |  |||||||| |||||||||| |||||||||| ||||||     
T  11269097 ttgctgttagctagagctgttacaaaactctttggttttcctatttttatgcttgtaa-tatgagtttaaggcattgtcttaaggttttaggttataaaa 11268999  T
Q  238 aggtcttccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgcttttatttt 337  Q
    ||||||||||||| || ||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  11268998 aggtcttccatcaaacttgtaatcatcttggaatccagtgaacttattttagattgaatcaaagttaacattgttatgagtttattcttgcttttatttt 11268899  T
Q  338 gtgcactttacattcttgaattttactttcttgtt--------------ctttatatttatgcaatttatcttcaacaatttacattcagtcatttacaa 423  Q
    |||||||||||| ||||||| ||||||||||||||               ||||||||||||||||||||||||| ||||||||||||||||||    ||    
T  11268898 gtgcactttacactcttgaactttactttcttgtttttattttattttattttatatttatgcaatttatcttcagcaatttacattcagtcat----aa 11268803  T
Q  424 ttatacaatttatttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtc----taatgacttaatcctattcaaaccaagtt 519  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||    |||||||||||| |||||||||||||||     
T  11268802 ttatgcaatttatttctatgcctttttacttagtagactttctagtcttgggaatgttggaatagtctaattaatgacttaattctattcaaaccaagtc 11268703  T
Q  520 tagatatcttttttgtttaaatt 542  Q
    ||||||||| | |||||||||||    
T  11268702 tagatatctatgttgtttaaatt 11268680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 44 - 542
Target Start/End: Original strand, 11281004 - 11281517
Alignment:
Q  44 tgaatagttggaaaaacacacggtccttgctga-ccatgtccaatattttaacacttggaagctgaaaagtgcacgatccgg-----agaccgtgtgttt 137  Q
    ||||||| | ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||| | || |      |  ||||| ||||    
T  11281004 tgaatagctagaaaaacacacggtccttgctaatccatgtccagtattttaacacttggaagctgaaaagtgcatggtctgttatgcaagccgtgcgttt 11281103  T
Q  138 ttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaat 237  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||| |  |||||||||||||||| || |||||||||| ||||||     
T  11281104 ttgctgttagctagagctgttacaaaactctttggttttcctatttttaagcttgtaa-tatgagtttaatgcattgtgttaaggttttaggttataaaa 11281202  T
Q  238 aggtcttccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgcttttatttt 337  Q
    ||||||||||||| || |||||||||||| |||||  |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  11281203 aggtcttccatcaaacttgtaatcatcttcgaatccggtgaacttgttttagattgaatcaaagttaacattgttatgagtttattcttgcttttatttt 11281302  T
Q  338 gtgcactttacattcttgaattttactttcttgttctt-----------------tatatttatgcaatttatcttcaacaatttacattcagtcattta 420  Q
    |||||||||||||||||||| |||||||||||||| ||                 |||||||| |||||||||||||||||||||||||||||||||       
T  11281303 gtgcactttacattcttgaactttactttcttgtttttttttttttttttttttctatatttacgcaatttatcttcaacaatttacattcagtcat--- 11281399  T
Q  421 caattatacaatttatttctatgcctttttacttagtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
     |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||   |||||||||||||| ||||||||||||||| |    
T  11281400 -aattatgcaatttatttctatgcctttttacttagtagactttctagtcttgggaatgttggaa---tctaatgacttaattctattcaaaccaagtct 11281495  T
Q  521 agatatcttttttgtttaaatt 542  Q
    |||||||| |||||||||||||    
T  11281496 agatatctattttgtttaaatt 11281517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 540 - 668
Target Start/End: Complemental strand, 11268595 - 11268466
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactaca-caaaaaatgattatgaaaa 638  Q
    |||| ||||||| |||||||||||||||||||| || ||||||||||||| ||||||||| |||||| ||||||||||||  |||||||||||| | |||    
T  11268595 attttatcatcttaaatatcaaacgaatgaccggaaagtgaagtttgatagtggaacaaatgagattggacaagactacagaaaaaaatgattacggaaa 11268496  T
Q  639 cacaccagatgaatagttttgtgcagtctt 668  Q
    ||| ||| ||||| ||||||||| ||||||    
T  11268495 caccccaaatgaacagttttgtgaagtctt 11268466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 540 - 661
Target Start/End: Original strand, 11281602 - 11281723
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgattatgaaaac 639  Q
    |||| ||||||| |||||| |||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||||| | ||||||||||||    ||     
T  11281602 attttatcatcttaaatattaaacgaatgaccgaaaagtgaagtttgatactggaacaaatgagattggacaagactatagaaaaaatgattacaggaag 11281701  T
Q  640 acaccagatgaatagttttgtg 661  Q
    || ||| |||||||||||||||    
T  11281702 accccaaatgaatagttttgtg 11281723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 455 - 538
Target Start/End: Complemental strand, 6847787 - 6847702
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgactta--atcctattcaaaccaagtttagatatcttttttgttta 538  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| || |||||| |||||||||    
T  6847787 agtagacctcctagttttgggattgttggaatagtctaatgacttaatatcctattcaaaccaagtctatatatctattttgttta 6847702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 1864610 - 1864694
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  1864610 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 1864694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 134 - 271
Target Start/End: Complemental strand, 6848127 - 6847989
Alignment:
Q  134 gtttttgctgtcagcaagagctgttagaaaactctttggttttccta-ttttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggcta 232  Q
    |||||| |||||||   ||||| ||| ||||||||||| ||||| |  ||||||||| ||||||  |||||||||||| ||| ||||||||| |||||||    
T  6848127 gtttttcctgtcagttggagcttttacaaaactctttgattttctttgttttaaagcctgtaaaaacgagtttaatgccttgccttgaggttctaggcta 6848028  T
Q  233 taaataggtcttccatcatacctgtaatcatcttggaat 271  Q
    ||||||||||   ||||| || |||| ||||||||||||    
T  6848027 taaataggtccctcatcagacttgtattcatcttggaat 6847989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 1941641 - 1941581
Alignment:
Q  463 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 523  Q
    ||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  1941641 ttctagtcttgggattgttggaatagtttaatgactgaattctattcaaaccaagtttaga 1941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 613
Target Start/End: Original strand, 14925823 - 14925896
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 613  Q
    |||| |||||||||||||||||||||| || |||||| |||||||| ||||||||||||| || ||| ||||||    
T  14925823 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttaatattggaacaaatgatattagacaag 14925896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 613
Target Start/End: Original strand, 15349289 - 15349362
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 613  Q
    |||| |||||||||||||||||||||| || |||||| |||||||| ||||||||||||| || ||| ||||||    
T  15349289 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttaatattggaacaaatgatattagacaag 15349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 551 - 614
Target Start/End: Complemental strand, 1941523 - 1941460
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    ||||||||||||||||  |||||||||||||||||||| || ||||||| |||||| |||||||    
T  1941523 tcaaatatcaaacgaagtaccgaaaggtgaagtttgattttagaacaaatgagattagacaaga 1941460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 668
Target Start/End: Complemental strand, 6847608 - 6847488
Alignment:
Q  545 atcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgattatgaaaacacacc 644  Q
    ||||||||||||||||||| ||  || |||  | ||||||||||||||||||||| |||||| ||| |||| ||||||||  ||   |||  ||||| ||    
T  6847608 atcatctcaaatatcaaacaaagtactgaacagagaagtttgatattggaacaaatgagattagactagacaacacaaaacttg---atgggaacacccc 6847512  T
Q  645 agatgaatagttttgtgcagtctt 668  Q
    ||||| ||||||||||| ||||||    
T  6847511 agatggatagttttgtgaagtctt 6847488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 615
Target Start/End: Original strand, 9046420 - 9046484
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagac 615  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||| ||| || ||| ||||||||    
T  9046420 tcaaatatcaaacgaaggaccgaaaagtgaagtttgatattagaataaatgatattagacaagac 9046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 6712380 - 6712334
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  6712380 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 6712334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 8787232 - 8787178
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  8787232 cttcttgtattgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 8787178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 540 - 598
Target Start/End: Original strand, 15523336 - 15523394
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 598  Q
    |||| |||||| |||||||||| |||| || |||||| |||||||||||||||||||||    
T  15523336 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaacaa 15523394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 15061402 - 15061451
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  15061402 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 15061451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 1751127 - 1751190
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 518  Q
    |||||||||| |||| ||| ||||||||||   ||||||||||| |||||||||||| ||||||    
T  1751127 agtagaccttttagtcttgagattgttggatgggtctaatgactaaatcctattcaagccaagt 1751190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 3376460 - 3376405
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3376460 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3376405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 21005470 - 21005415
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21005470 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21005415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 538203 - 538157
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  538203 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 538157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 545077 - 545031
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  545077 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 545031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 598
Target Start/End: Complemental strand, 679274 - 679216
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 598  Q
    |||| |||||| |||||||||| |||| || |||||| |||||||||||| ||||||||    
T  679274 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatactggaacaa 679216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 821389 - 821435
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  821389 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 821435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 826402 - 826448
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  826402 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 826448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 828413 - 828459
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  828413 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 828459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 4158618 - 4158572
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4158618 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4158572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 4466600 - 4466554
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4466600 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4466554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 5840819 - 5840865
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  5840819 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 5840865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 8713137 - 8713183
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8713137 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8713183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 8718641 - 8718687
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8718641 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 8780393 - 8780339
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  8780393 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 8780339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 9004766 - 9004812
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9004766 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9004812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 9009751 - 9009797
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9009751 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9009797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 9258569 - 9258523
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9258569 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9258523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 9311684 - 9311730
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9311684 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9311730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 12548251 - 12548205
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12548251 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 12548205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 14229894 - 14229848
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14229894 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14229848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 15916236 - 15916190
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15916236 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15916190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 15924545 - 15924499
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15924545 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15924499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 16330828 - 16330782
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16330828 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16330782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 18389808 - 18389854
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18389808 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18389854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 19014585 - 19014539
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19014585 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19014539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 19364547 - 19364593
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19364547 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19364593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 23203939 - 23203985
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23203939 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23203985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 23510066 - 23510112
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23510066 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23510112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 33609867 - 33609921
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  33609867 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 33609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 37100303 - 37100257
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  37100303 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 37100257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 39388877 - 39388931
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  39388877 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 39388931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 523
Target Start/End: Original strand, 6531399 - 6531468
Alignment:
Q  455 agtagaccttcta-gtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 523  Q
    |||| |||||||| || ||||||||||||||  |||||||||||| ||| |||||||| |||||| ||||    
T  6531399 agtataccttctatgtcttgggattgttggataagtctaatgactaaattctattcaagccaagtctaga 6531468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 15066491 - 15066536
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  15066491 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 15066536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 1e-58; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 238 - 454
Target Start/End: Complemental strand, 12727395 - 12727187
Alignment:
Q  238 aggtcttccatcatacctgtaatcatcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgctttt-attt 336  Q
    ||||| ||||||| |  |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  12727395 aggtcctccatcagatttgtaatcatcttggaatcttgtcaacttgtttttgattgaatcaaagttaacattgttctaagtttattcttgctttttattt 12727296  T
Q  337 tgtgcactttacattcttgaattttactttcttgttctttatatttatgcaatttatcttcaac-aatttacattcagtcatttacaattatacaattta 435  Q
    | ||||||| |          |||||||||||||||||||| ||||  ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  12727295 tctgcacttca----------ttttactttcttgttctttacatttcagcaatttatcttccaccaatttacattcagtcatttacaattatacaattta 12727206  T
Q  436 tttctatgcctttttactt 454  Q
    |||||||||||||||||||    
T  12727205 tttctatgcctttttactt 12727187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 17735244 - 17735150
Alignment:
Q  261 catcttggaatcttgtgaacttgttttagattgaatcaaacttaacattgttctaagtttattcttgcttttattttgtgcactttacattcttg 355  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17735244 catcttggaatctggtgaacttgttttagattgaatcaaagttaatattgttctaagtttattcttgcttttattttctgcactttacattcttg 17735150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 125 - 271
Target Start/End: Original strand, 27318397 - 27318544
Alignment:
Q  125 agaccgtgtgtttttgctgtcagcaagagctgttagaaaactctttggttttcc-tattttaaagcttgtaaatccgagtttaatgcattgtcttgaggt 223  Q
    |||||||| |||||||||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||      
T  27318397 agaccgtgcgtttttgctgtcagctggagctgttacaaaactctttggttttccctattttaaagcttgtaaattcgagtttaatgccttgtcttgagaa 27318496  T
Q  224 tttaggctataaataggtcttccatcatacctgtaatcatcttggaat 271  Q
    | || | |||||||||||| ||| ||| |  |||||||||||||||||    
T  27318497 tctatgttataaataggtcctccgtcagatttgtaatcatcttggaat 27318544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 455 - 540
Target Start/End: Original strand, 27318718 - 27318803
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaa 540  Q
    |||||||||| |||| || | |||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  27318718 agtagaccttttagtcttagaattgttggaacagtctaatgacttaatcctattcaaaccaagtttagatatatattttgtttaaa 27318803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 545 - 624
Target Start/End: Original strand, 2130260 - 2130339
Alignment:
Q  545 atcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  2130260 atcatctcaaatatcaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 2130339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 540 - 621
Target Start/End: Complemental strand, 16527433 - 16527352
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacaca 621  Q
    |||| ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || ||| |||||||| |||||    
T  16527433 atttcatcatctcaaatatcaaacgaatgatcgaaagatgaagtttgattttggaacaaatgaaattagacaagacgacaca 16527352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 15421406 - 15421490
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||||||||| ||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  15421406 atttcatcatctcaaatatgaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 15421490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 540 - 630
Target Start/End: Complemental strand, 12726983 - 12726893
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgat 630  Q
    |||| ||||||||||| || |||| || ||||||||  |||||||||||||||||||||| |||||| ||||||||| ||||||| |||||    
T  12726983 atttcatcatctcaaacattaaacaaaggaccgaaaaatgaagtttgatattggaacaaatgagattggacaagactgcacaaaacatgat 12726893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 8236384 - 8236448
Alignment:
Q  455 agtagaccttctagtatt-gggattgttggaatagtctaatgacttaatcctattcaaaccaagt 518  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  8236384 agtagaccttttagtctttgggattgttggaatagtctaatgacttaatcttattcaaaccaagt 8236448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 8236099 - 8236186
Alignment:
Q  182 tttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatcatcttgga 269  Q
    ||||||| |||||| | || ||||||||| ||||||||||||||||||||||||| || || ||||||| || |||||| ||||||||    
T  8236099 tttaaagattgtaatttcgtgtttaatgccttgtcttgaggttttaggctataaaaagatcatccatcagacttgtaatgatcttgga 8236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 455 - 518
Target Start/End: Complemental strand, 17735049 - 17734986
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 518  Q
    ||||||| ||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||    
T  17735049 agtagacgttctagtcttaggattgttgaaatagtctaatgactaaatcctattcaaaccaagt 17734986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 455 - 542
Target Start/End: Complemental strand, 12727157 - 12727068
Alignment:
Q  455 agtagaccttctagtattgggattgtt--ggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 542  Q
    |||| |||||||||| |||| ||| ||  |||||||||||||||||||||||||||||||  |||| ||||||||| ||||| |||||||    
T  12727157 agtaaaccttctagtcttggaattttttaggaatagtctaatgacttaatcctattcaaattaagtctagatatctattttggttaaatt 12727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 548 - 606
Target Start/End: Original strand, 28553606 - 28553664
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 606  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||    
T  28553606 atctcaaatatcaaacgaaggaccgaaaggtgaagtttgatattgaatcaaatgagatt 28553664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 668
Target Start/End: Original strand, 27318869 - 27318961
Alignment:
Q  573 aaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgattatgaaaacacaccagatgaatagttttgtgcagtctt 668  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||||||  ||   |||  ||||| ||| ||||||||||||||| ||||||    
T  27318869 aaaggtgaagtttgatattggaacaaatgagattagacaagacaacacaaaacttg---atgggaacaccccaaatgaatagttttgtgaagtctt 27318961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 420
Target Start/End: Complemental strand, 17735155 - 17735099
Alignment:
Q  365 ttcttgttctttatatttatgcaatttatcttc-aacaatttacattcagtcattta 420  Q
    |||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  17735155 ttcttgttctttatatttttgcaatttatcttctagcaatttatattcagtcattta 17735099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 606
Target Start/End: Original strand, 12788932 - 12788987
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 606  Q
    |||||||||||||||| |||||| ||||||||||||||||||  ||||| ||||||    
T  12788932 tcaaatatcaaacgaaggaccgagaggtgaagtttgatattgatacaaatgagatt 12788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 454 - 520
Target Start/End: Complemental strand, 52755303 - 52755236
Alignment:
Q  454 tagtagac-cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    |||||||| ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  52755303 tagtagactcttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 52755236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 21924812 - 21924858
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||    
T  21924812 ttgggattgttagatgagtctaatgacttaatcctattcaaaccaag 21924858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 36850294 - 36850245
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  36850294 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 36850245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 592
Target Start/End: Original strand, 28553553 - 28553593
Alignment:
Q  552 caaatatcaaacgaatgaccgaaaggtgaagtttgatattg 592  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  28553553 caaatatcaaacgaaggatcgaaaggtgaagtttgatattg 28553593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 25727092 - 25727147
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25727092 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25727147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 25735500 - 25735555
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25735500 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25735555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 2386379 - 2386425
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2386379 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2386425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 3985407 - 3985453
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3985407 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3985453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 3990686 - 3990732
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3990686 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 8649018 - 8649064
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8649018 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8649064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 13250887 - 13250933
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13250887 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13250933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 16485428 - 16485474
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16485428 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 520
Target Start/End: Complemental strand, 19788229 - 19788171
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||| || ||||||||||||||   |||||||||| |||||||| |||||||||||||    
T  19788229 cttcttgtcttgggattgttggatatgtctaatgacataatcctaatcaaaccaagttt 19788171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 27047589 - 27047635
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  27047589 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 27047635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 27911268 - 27911222
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  27911268 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 27911222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 38045486 - 38045532
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  38045486 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 38045532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 41802424 - 41802470
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41802424 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41802470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 46143480 - 46143434
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  46143480 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 46143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 49379583 - 49379537
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  49379583 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 49379537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 17986709 - 17986758
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||||||||||||  ||||||||||| |||||||| ||||| |||||||    
T  17986709 ttgggattgttggataagtctaatgacataatcctaatcaaatcaagttt 17986758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 612
Target Start/End: Original strand, 37627606 - 37627667
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaa 612  Q
    ||||||||||||||||  || || ||||||| |||||||||||| |||| |||||| |||||    
T  37627606 tcaaatatcaaacgaagtactgagaggtgaaatttgatattggatcaaatgagattagacaa 37627667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 39286570 - 39286525
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  39286570 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 39286525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 41461877 - 41461926
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||| ||||||||  ||||||||||| |||||||| |||||||||||||    
T  41461877 ttgggtttgttggataagtctaatgacataatcctaatcaaaccaagttt 41461926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 88 - 247
Target Start/End: Complemental strand, 9798816 - 9798655
Alignment:
Q  88 attttaacacttggaagctgaaaagtgcacgatccgg-agaccgtgtgtttttgctgtcagcaagagctgttagaaaactctttggttt-tcctatttta 185  Q
    ||||||||||||||||| ||||||||||||| |   | |||||||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  9798816 attttaacacttggaagttgaaaagtgcacggttgtgcagaccgtgcgtttttgctgtcagctagagctgttacaaaactctttggtttctcctatttta 9798717  T
Q  186 aagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtcttcca 247  Q
    |||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  9798716 aagcttgtaaattcgagtttaatgccttgtctagaggttctaggctataaataggtcatcca 9798655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 89 - 238
Target Start/End: Original strand, 15201683 - 15201837
Alignment:
Q  89 ttttaacacttggaagctgaaaagtgcacgatcc-----ggagaccgtgtgtttttgctgtcagcaagagctgttagaaaactctttggttttcctattt 183  Q
    |||||||||||| ||||||||||||||||| ||      | | |||||| ||||||| ||||| | |||||||||| |||||||||||||||||||||||    
T  15201683 ttttaacacttgtaagctgaaaagtgcacggtctactgtgcataccgtgcgtttttgttgtcaactagagctgttacaaaactctttggttttcctattt 15201782  T
Q  184 taaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaata 238  Q
    ||||| |||||||||| ||||||||   ||||||||||||| |||||||||||||    
T  15201783 taaagtttgtaaatccaagtttaatatcttgtcttgaggttctaggctataaata 15201837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 455 - 539
Target Start/End: Complemental strand, 9798431 - 9798347
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaa 539  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||| ||||||||||    
T  9798431 agtagaccttctagtcttgggattgtcggaatagtctaatgacttaatcctattcagatcaagtctagatatctattttgtttaa 9798347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 9798515 - 9798472
Alignment:
Q  400 caatttacattcagtcatttacaattatacaatttatttctatg 443  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  9798515 caatttacattcagtcatttacaattaaacaatttatttctatg 9798472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 13539657 - 13539591
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    |||||||||| |||||||| |||||||||||||||||| |||||| | |||| |||||| |||||||    
T  13539657 atctcaaataccaaacgaaagaccgaaaggtgaagtttaatattgaatcaaatgagattagacaaga 13539591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 614
Target Start/End: Original strand, 13684817 - 13684883
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    |||||||||| |||||||| |||||||||||||||||| |||||| | |||| |||||| |||||||    
T  13684817 atctcaaataccaaacgaaagaccgaaaggtgaagtttaatattgaatcaaatgagattagacaaga 13684883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 31469600 - 31469554
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  31469600 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 31469554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 9798251 - 9798174
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgag-attcgacaagactacacaaaa 624  Q
    ||||||||||||| | ||| || ||||| ||||||||||||||||||||||| ||| ||| |||| ||| ||||||||    
T  9798251 atctcaaatatcagaagaaggaacgaaatgtgaagtttgatattggaacaaatgagaattagacaggacaacacaaaa 9798174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 517
Target Start/End: Original strand, 9317986 - 9318034
Alignment:
Q  469 tattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9317986 tattgggattgttggataagtctaatgacataatcctaatcaaaccaag 9318034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 592
Target Start/End: Complemental strand, 17315262 - 17315222
Alignment:
Q  552 caaatatcaaacgaatgaccgaaaggtgaagtttgatattg 592  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  17315262 caaatatcaaacgaaggactgaaaggtgaagtttgatattg 17315222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 592
Target Start/End: Complemental strand, 17337173 - 17337133
Alignment:
Q  552 caaatatcaaacgaatgaccgaaaggtgaagtttgatattg 592  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  17337173 caaatatcaaacgaaggaccgaaatgtgaagtttgatattg 17337133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 21319566 - 21319621
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || |||||||| |||||  |||||||||||||||||||| ||||||||||    
T  21319566 cttcttgtcttgggattcttggacaagtctaatgacttaatcctaatcaaaccaag 21319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 22285118 - 22285173
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22285118 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22285173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 1685806 - 1685852
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1685806 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1685852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 6570517 - 6570471
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6570517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6570471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 14351590 - 14351544
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14351590 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14351544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 14878233 - 14878187
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14878233 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14878187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 17126987 - 17127033
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17126987 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17127033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 18264330 - 18264284
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18264330 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 18264284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 18273343 - 18273297
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18273343 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 18273297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 19997535 - 19997581
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19997535 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19997581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 20038417 - 20038371
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20038417 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20038371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 20044072 - 20044026
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20044072 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20044026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 21103574 - 21103528
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21103574 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21103528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 22370699 - 22370745
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22370699 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22370745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 23503277 - 23503331
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23503277 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23503331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 25751645 - 25751599
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25751645 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25751599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 26854221 - 26854267
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  26854221 ttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 26854267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 29325452 - 29325498
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  29325452 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 29325498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 35996235 - 35996281
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  35996235 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 35996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 43836216 - 43836170
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43836216 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 21105616 - 21105571
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  21105616 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 21105571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 523
Target Start/End: Original strand, 27933242 - 27933291
Alignment:
Q  474 ggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 523  Q
    ||||||||| |||| |||| ||| | ||||||||||||||||||||||||    
T  27933242 ggattgttgaaataatctattgattgaatcctattcaaaccaagtttaga 27933291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 29003784 - 29003829
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  29003784 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 29003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 548 - 612
Target Start/End: Complemental strand, 17337121 - 17337057
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaa 612  Q
    ||||| ||||||||| ||| || ||||| |||||||||||||||| | |||| |||||| |||||    
T  17337121 atctctaatatcaaatgaaggaacgaaaagtgaagtttgatattgaatcaaatgagattagacaa 17337057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 18008279 - 18008335
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 518  Q
    ||||| || |||||||||||| |  ||||||||||| |||||||| |||||||||||    
T  18008279 cttcttgttttgggattgttgtataagtctaatgacctaatcctaatcaaaccaagt 18008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 21939422 - 21939378
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 515  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  21939422 ttgggattgttggataagtctaatgacataatcctaatcaaacca 21939378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 2e-42; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 16999468 - 16999332
Alignment:
Q  135 tttttgctgtcagcaagagctgttagaaaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctata 234  Q
    ||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  16999468 tttttgctgtcagcaggagatgttacaaaactcttcggttttcctattttaaagcttgtaaatccgagtttaatgtcatgtcttgaggttttaggctata 16999369  T
Q  235 aataggtcttccatcatacctgtaatcatcttggaat 271  Q
    |||||||| || |||| || | |||||||||||||||    
T  16999368 aataggtcctcaatcagacttataatcatcttggaat 16999332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 539
Target Start/End: Complemental strand, 13833058 - 13832967
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaat-------gacttaatcctattcaaaccaagtttagatatcttttttgtttaa 539  Q
    |||||||||| |||| ||| ||||||||||||||||||||       |||||||||||||||||||||||| || |||||| ||||||||||    
T  13833058 agtagaccttttagttttgtgattgttggaatagtctaatctctaatgacttaatcctattcaaaccaagtctaaatatctattttgtttaa 13832967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 613
Target Start/End: Complemental strand, 27992268 - 27992195
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 613  Q
    |||| ||||||||||||||||| |||| || |||||| |||||||||||||||||||||| || ||| ||||||    
T  27992268 atttcatcatctcaaatatcaagcgaaagatcgaaagatgaagtttgatattggaacaaatgaaattagacaag 27992195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 614
Target Start/End: Original strand, 8890726 - 8890792
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    |||||||||||||||||||  ||||| | |||||||||||||||||||||||  ||||| |||||||    
T  8890726 atctcaaatatcaaacgaagaaccgagaagtgaagtttgatattggaacaaattagattagacaaga 8890792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 614
Target Start/End: Original strand, 11271633 - 11271699
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    ||||||||||||||| ||| || |||||| ||||||||||||||||| |||| |||||| |||||||    
T  11271633 atctcaaatatcaaatgaaggatcgaaagatgaagtttgatattggatcaaatgagattagacaaga 11271699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 624
Target Start/End: Complemental strand, 16998939 - 16998861
Alignment:
Q  546 tcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||||||||||||||||||||  |  ||| || ||||||||||||||||||||| ||| || |||||||| ||||||||    
T  16998939 tcatctcaaatatcaaacgaagtaatgaacggagaagtttgatattggaacaaaagaggttagacaagacaacacaaaa 16998861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 542
Target Start/End: Complemental strand, 16999087 - 16999029
Alignment:
Q  484 aatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 542  Q
    ||||||||||||||| ||||||||||||||||||| |||||| || |||| ||||||||    
T  16999087 aatagtctaatgactgaatcctattcaaaccaagtatagatacctattttatttaaatt 16999029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 400 - 443
Target Start/End: Complemental strand, 13833142 - 13833099
Alignment:
Q  400 caatttacattcagtcatttacaattatacaatttatttctatg 443  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  13833142 caatttacattcagtcatttacaattatgaaatttatttctatg 13833099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 20225177 - 20225122
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  20225177 cttcttgtcttgggattgttggacaagtctaatgacttaatcctaatcaaaccaag 20225122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 594
Target Start/End: Original strand, 12881594 - 12881640
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattgga 594  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||    
T  12881594 atctcaaatatcaaacgaagaaccgagaggtgaagtttgatattgga 12881640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 606
Target Start/End: Complemental strand, 31139284 - 31139226
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 606  Q
    |||||| ||||||||||||  ||||| |||||||||||||||||||| |||| ||||||    
T  31139284 atctcatatatcaaacgaagaaccgagaggtgaagtttgatattggatcaaatgagatt 31139226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 14071652 - 14071603
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  14071652 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 14071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 611
Target Start/End: Original strand, 6461691 - 6461751
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgaca 611  Q
    ||||||||||| ||||  |||||||||||||| |||||||| ||||||| |||||| ||||    
T  6461691 tcaaatatcaatcgaagtaccgaaaggtgaagattgatattagaacaaatgagattggaca 6461751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 606
Target Start/End: Original strand, 4864093 - 4864144
Alignment:
Q  555 atatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 606  Q
    |||||||||||| |||||| ||||||| ||||||||||||| ||| ||||||    
T  4864093 atatcaaacgaaggaccgagaggtgaaatttgatattggaataaatgagatt 4864144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 9762393 - 9762346
Alignment:
Q  552 caaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaa 599  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||||    
T  9762393 caaatatcaagcgaatgatcgaaagatgaaatttgatattggaacaaa 9762346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 11399023 - 11399078
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  11399023 cttcttgtgttgggattgttggataagtctaatgacataatcctaatcaaaccaag 11399078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 11827356 - 11827301
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  11827356 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 11827301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 17041863 - 17041918
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17041863 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17041918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 22038987 - 22039042
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22038987 cttcttgtcttgggattgttggataagtctaatgacctaatcctaatcaaaccaag 22039042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 43496342 - 43496397
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43496342 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43496397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 1993594 - 1993648
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  1993594 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 1993648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 2781396 - 2781442
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2781396 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2781442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 3279988 - 3280034
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3279988 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 3338685 - 3338639
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3338685 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3338639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 4768952 - 4768906
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4768952 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4768906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 4830203 - 4830249
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4830203 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4830249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 6710194 - 6710240
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6710194 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6710240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 6809815 - 6809861
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6809815 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6809861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 6815637 - 6815683
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6815637 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6815683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 9360419 - 9360373
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9360419 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 12246954 - 12247000
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12246954 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 12247000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 13087671 - 13087717
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13087671 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13087717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 13093902 - 13093856
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13093902 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 13093856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 13418539 - 13418585
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  13418539 ttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 13418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 15425106 - 15425060
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15425106 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15425060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 15430006 - 15430052
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15430006 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15430052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 15854357 - 15854403
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15854357 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15854403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 16385393 - 16385347
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16385393 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16385347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 17023404 - 17023450
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17023404 ttgggattgttggataagtctaatgacctaatcctaatcaaaccaag 17023450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 22164658 - 22164612
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22164658 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22164612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 22169962 - 22169916
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22169962 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22169916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 24697007 - 24697053
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24697007 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24697053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 25055170 - 25055216
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25055170 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25055216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 25765771 - 25765725
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25765771 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25765725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 41473073 - 41473119
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41473073 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41473119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 43842002 - 43841956
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  43842002 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 43841956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 53354740 - 53354694
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  53354740 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 53354694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 4365997 - 4366042
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4365997 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 4366042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 4383526 - 4383571
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4383526 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 4383571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 13098461 - 13098506
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  13098461 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 13098506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 551 - 599
Target Start/End: Complemental strand, 20487981 - 20487933
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaa 599  Q
    ||||||||||||| ||  ||||| |||||||||||||||||||| ||||    
T  20487981 tcaaatatcaaacaaagtaccgagaggtgaagtttgatattggatcaaa 20487933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 42687950 - 42687841
Alignment:
Q  162 aaactctttggttttcctattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatc 261  Q
    ||||||||||||||||| |||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||| ||||| ||||||| || |||||||    
T  42687950 aaactctttggttttcccattttaaagcttataaatatgagtttaatgtcttgtcttgaggttttaggctataaacaggtcctccatcaaacttgtaatc 42687851  T
Q  262 atcttggaat 271  Q
    ||||||||||    
T  42687850 atcttggaat 42687841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 20684884 - 20684951
Alignment:
Q  199 cgagtttaatgcattgtcttgaggttttaggctataaataggtcttccatcatacctgtaatcatctt 266  Q
    |||||||||||  |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  20684884 cgagtttaatgtcttgtcttgaggtttcaggctataaataggtcctccatcatacttgtaatcatctt 20684951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 542
Target Start/End: Complemental strand, 42687607 - 42687542
Alignment:
Q  477 ttgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatt 542  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||||| |||| ||||||||    
T  42687607 ttgttggaatagtctaatgattaaatcctattcaaaccaagtctagatatctattttatttaaatt 42687542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 19222220 - 19222304
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||||||||||||||||| || || ||| |||||||||||||||||||||| || ||| |||||||| || |||||    
T  19222220 atttcatcatctcaaatatcaaacgaaggatcggaagatgaagtttgatattggaacaaatgaaattagacaagacgacgcaaaa 19222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Original strand, 20055252 - 20055325
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 528  Q
    |||||||||| ||||  ||| ||||||| |||||||||||| |||||||||||||||||||||| || ||||||    
T  20055252 agtagaccttttagtcatggaattgttgaaatagtctaatggcttaatcctattcaaaccaagtataaatatct 20055325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 614
Target Start/End: Complemental strand, 26069561 - 26069494
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggt-gaagtttgatattggaacaaacgagattcgacaaga 614  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||| |||| |||||| |||||||    
T  26069561 atctcaaatatcaaacgaatgatcgaaaggtggaagttcgatattggatcaaatgagattagacaaga 26069494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 597
Target Start/End: Complemental strand, 23029348 - 23029291
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaaca 597  Q
    |||| |||||| |||||||||| |||| || |||||| ||||||||||||||||||||    
T  23029348 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaaca 23029291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 613
Target Start/End: Original strand, 23114566 - 23114639
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 613  Q
    |||| ||||||||||||||||| |||||||  ||| | |||||||| ||||||||||||| || ||| ||||||    
T  23114566 atttcatcatctcaaatatcaagcgaatgatagaatgatgaagtttaatattggaacaaatgaaattagacaag 23114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 438
Target Start/End: Original strand, 20055180 - 20055215
Alignment:
Q  403 tttacattcagtcatttacaattatacaatttattt 438  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20055180 tttacattcagtcatttacaattatgcaatttattt 20055215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 20738496 - 20738551
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20738496 cttcttgtcttgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 20738551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 22948713 - 22948768
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || |||||||||| |||  ||||||||||| |||||||||||||||||||    
T  22948713 cttcttgtcttgggattgtcggataagtctaatgacataatcctattcaaaccaag 22948768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 7761053 - 7761007
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  7761053 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 7761007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 15732091 - 15732137
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15732091 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15732137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 15736310 - 15736356
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15736310 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15736356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 18613226 - 18613180
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18613226 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18613180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 20595268 - 20595222
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20595268 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 20790161 - 20790115
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20790161 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20790115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 20795942 - 20795896
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20795942 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20795896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 20832410 - 20832364
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20832410 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20832364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 21734555 - 21734509
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21734555 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21734509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 21812198 - 21812152
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21812198 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21812152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 23435475 - 23435521
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23435475 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23435521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 23446842 - 23446888
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23446842 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23446888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 23618414 - 23618368
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23618414 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 23685000 - 23685046
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23685000 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23685046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 23849811 - 23849765
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23849811 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23849765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 23973148 - 23973102
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23973148 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23973102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 24165395 - 24165449
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  24165395 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 24165449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 24935621 - 24935667
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24935621 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24935667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 24941313 - 24941359
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24941313 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 26848421 - 26848467
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  26848421 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 26848467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 34223066 - 34223012
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  34223066 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 34223012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 34780459 - 34780505
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  34780459 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 34780505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 41765725 - 41765679
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  41765725 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 41765679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 339 - 451
Target Start/End: Complemental strand, 42687771 - 42687654
Alignment:
Q  339 tgcacttt-acattcttgaattttactttct--tgttctttatatttatgcaa-tttatcttcaa-caatttacattcagtcatttacaattatacaatt 433  Q
    |||||||| |||||||||   ||||||||||  |||| ||||||||| ||||| ||||| ||| | ||||||| |||||  ||||||||||||| |||||    
T  42687771 tgcacttttacattcttgctctttactttctcttgttatttatatttctgcaaatttatattccagcaatttatattcaaacatttacaattatgcaatt 42687672  T
Q  434 tatttctatgccttttta 451  Q
    || ||||||| |||||||    
T  42687671 tagttctatgtcttttta 42687654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 517
Target Start/End: Original strand, 12410677 - 12410722
Alignment:
Q  472 tgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||    
T  12410677 tgggattgttggatgagtctaatgacctaatcctaatcaaaccaag 12410722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 605
Target Start/End: Original strand, 26266671 - 26266728
Alignment:
Q  548 atctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagat 605  Q
    ||||||||||||||| ||| ||| |||| |||| ||||||||||||| |||| |||||    
T  26266671 atctcaaatatcaaatgaaggactgaaatgtgaggtttgatattggatcaaatgagat 26266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 624
Target Start/End: Complemental strand, 42687429 - 42687384
Alignment:
Q  579 gaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    ||||||||||||||||||||| |||||| || ||||| ||||||||    
T  42687429 gaagtttgatattggaacaaatgagattagataagacaacacaaaa 42687384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 473 - 517
Target Start/End: Original strand, 23771076 - 23771120
Alignment:
Q  473 gggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23771076 gggattgttggataagtctaatgacataatcctaatcaaaccaag 23771120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 21511888 - 21511815
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 528  Q
    |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21511888 agtagaccatttagtcttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtctaaatatct 21511815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 540 - 623
Target Start/End: Complemental strand, 21511717 - 21511634
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaa 623  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| ||||| || |||||||    
T  21511717 atttcatcatctcaaatatcaaacgaatgatcgaaagatgaagtttgatattggaacaaatgaaattagacaatacgacacaaa 21511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 21516367 - 21516314
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctatt 508  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  21516367 agtagaccatttagtgttgggattgttggaatagtctaatgacttaatcctatt 21516314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 540 - 624
Target Start/End: Complemental strand, 21516196 - 21516112
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||||||||||||||||| || |||||  |||||||||||||||||| ||| || ||| ||||| || ||||||||    
T  21516196 atttcatcatctcaaatatcaaacgaaggatcgaaaaatgaagtttgatattggaataaatgaaattagacaatacgacacaaaa 21516112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 540 - 624
Target Start/End: Complemental strand, 25592902 - 25592818
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||| ||||||||||||| || |||||| ||||||||||||| |||||||| || ||| || ||||| ||||||||    
T  25592902 atttcatcatctccaatatcaaacgaaggatcgaaagatgaagtttgatatgggaacaaatgaaattagaaaagacgacacaaaa 25592818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 455 - 518
Target Start/End: Original strand, 23482639 - 23482702
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 518  Q
    ||||||| ||||| | |||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  23482639 agtagactttctactcttgggattgtgggaatagtctaatgactaaattctattcaaaccaagt 23482702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 35406551 - 35406603
Alignment:
Q  397 caacaatttacattcagtcatttacaattatacaatttatttctatgcctttt 449  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  35406551 caacaatttatattcagtcatttacaattatgcaattcatttctatgtctttt 35406603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 540 - 598
Target Start/End: Complemental strand, 24371220 - 24371162
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 598  Q
    |||| |||||| |||||||||| |||| || |||||| |||||||||||||||||||||    
T  24371220 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaacaa 24371162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 613
Target Start/End: Original strand, 35406740 - 35406802
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaag 613  Q
    |||||||||||||||| ||||||||| |||||||||||||| || || | |||||| ||||||    
T  35406740 tcaaatatcaaacgaaggaccgaaagatgaagtttgatattagagcagatgagattagacaag 35406802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 36684447 - 36684496
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||||||    
T  36684447 ttgggattgttggataagtctaatgacataatcctaatcaaaccaagttt 36684496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 23340708 - 23340763
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  23340708 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 23340763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 24507446 - 24507501
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  24507446 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 24507501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 28496641 - 28496586
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  28496641 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 28496586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 20172754 - 20172708
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20172754 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 20282197 - 20282243
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20282197 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 20282243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 21468386 - 21468340
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  21468386 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 21468340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 23698754 - 23698700
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23698754 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 23698700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 24366250 - 24366196
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  24366250 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 24366196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 25358287 - 25358333
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25358287 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25358333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 25370276 - 25370230
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25370276 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25370230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 27745219 - 27745265
Alignment:
Q  474 ggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    |||||||||||  ||||||||||| |||||||| |||||||||||||    
T  27745219 ggattgttggataagtctaatgacataatcctaatcaaaccaagttt 27745265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 23139937 - 23139892
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23139937 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23139892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 23551727 - 23551682
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  23551727 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 23551682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 517
Target Start/End: Original strand, 32140122 - 32140167
Alignment:
Q  472 tgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    |||||||||||||  ||||||||||| |||||||| ||||||||||    
T  32140122 tgggattgttggagaagtctaatgacataatcctaatcaaaccaag 32140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 574 - 614
Target Start/End: Complemental strand, 31603103 - 31603063
Alignment:
Q  574 aaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    ||||||||||||||||||||| |||| |||||| |||||||    
T  31603103 aaggtgaagtttgatattggatcaaatgagattagacaaga 31603063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 5e-21; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 55268081 - 55268165
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||||||||||||||||| || |||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  55268081 atttcatcatctcaaatatcaaacgaaggatcgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 55268165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 540 - 661
Target Start/End: Original strand, 4743091 - 4743209
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgattatgaaaac 639  Q
    |||| |||||||||||||||||||||| || | |||| |||||||||||||||||||||| || ||| |||||||| ||||||||  ||   |||  |||    
T  4743091 atttcatcatctcaaatatcaaacgaaggatcaaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaacttg---atgggaac 4743187  T
Q  640 acaccagatgaatagttttgtg 661  Q
    || |||||||||||||||||||    
T  4743188 accccagatgaatagttttgtg 4743209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 540 - 614
Target Start/End: Complemental strand, 12634345 - 12634271
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||| |||||||    
T  12634345 atttcatcatctcaaatatcaaatgaatgaccgaaatgtgaagtttgatattagaacaaatgagattagacaaga 12634271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 466 - 528
Target Start/End: Original strand, 21276770 - 21276832
Alignment:
Q  466 tagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 528  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21276770 tagtcttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtctaaatatct 21276832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 15048201 - 15048141
Alignment:
Q  463 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 523  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15048201 ttctagtcttgggattgttggaatagtctaatgactaaatcctattcaaaccaagtctaga 15048141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 15106223 - 15106283
Alignment:
Q  463 ttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 523  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  15106223 ttctagtcttgggattgttggaatagtctaatgactaaatcctattcaaaccaagtctaga 15106283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 24493252 - 24493336
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||||||||||||||||| ||  ||||| |||||||||||||||||||||| || ||| |||||||| ||||||||    
T  24493252 atttcatcatctcaaatatcaaacgaaggattgaaagatgaagtttgatattggaacaaatgaaattagacaagacgacacaaaa 24493336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 471 - 528
Target Start/End: Original strand, 17464992 - 17465049
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatct 528  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  17464992 ttgggattgttggaatagtctaatgacttaatcttattcaaaccaagtctaaatatct 17465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 17465147 - 17465231
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| |||||||||||||||||| ||| ||  ||||| |||||||||||||||||| ||| || ||| |||||||| ||||||||    
T  17465147 atttcatcatctcaaatatcaaatgaaggattgaaagatgaagtttgatattggaataaatgaaattagacaagacgacacaaaa 17465231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 540 - 624
Target Start/End: Complemental strand, 26493137 - 26493053
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaa 624  Q
    |||| ||||||||||||||||| |||  || |||||| ||||||||||||||| |||||| | |||| |||||||| ||||||||    
T  26493137 atttcatcatctcaaatatcaaccgatggatcgaaagatgaagtttgatattgaaacaaatgtgattagacaagacaacacaaaa 26493053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 661
Target Start/End: Complemental strand, 11377335 - 11377217
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaagactacacaaaaaatgattatgaaaac 639  Q
    |||| ||||||| |||||||||||||  || |||||| |||| |||||| |||||||||| | |||| |||||||| ||||||||  ||   |||  |||    
T  11377335 atttcatcatctgaaatatcaaacgatggatcgaaagatgaattttgatgttggaacaaatgtgattagacaagacaacacaaaacttg---atgggaac 11377239  T
Q  640 acaccagatgaatagttttgtg 661  Q
    || |||||||||||||||||||    
T  11377238 accccagatgaatagttttgtg 11377217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 599
Target Start/End: Original strand, 21276930 - 21276989
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaa 599  Q
    |||| |||||||||||||||||||||| || |||||  ||||||||||||||||||||||    
T  21276930 atttcatcatctcaaatatcaaacgaaggatcgaaaaatgaagtttgatattggaacaaa 21276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 614
Target Start/End: Original strand, 8898740 - 8898804
Alignment:
Q  550 ctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||  ||| |||||| |||||||    
T  8898740 ctcaaatatcaaacgaataagcgagaggtgaagtttgatattggattaaatgagattagacaaga 8898804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 12347523 - 12347569
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  12347523 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 12347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 614
Target Start/End: Original strand, 15154624 - 15154686
Alignment:
Q  552 caaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagattcgacaaga 614  Q
    ||||||||||| ||  |||||||| |||||||||||||||||| |||| |||||| |||||||    
T  15154624 caaatatcaaatgagagaccgaaatgtgaagtttgatattggagcaaatgagattagacaaga 15154686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 455 - 544
Target Start/End: Complemental strand, 26493308 - 26493219
Alignment:
Q  455 agtagaccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttagatatcttttttgtttaaatttg 544  Q
    |||||| |||||||| |||||||| |||||  ||||||| |||| |||||||||||| |||||| ||||  | | |||| ||||||||||    
T  26493308 agtagatcttctagtcttgggattattggatgagtctaaggactaaatcctattcaagccaagtctagaactttgttttatttaaatttg 26493219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 21276696 - 21276772
Alignment:
Q  153 gctgttagaaaactctttggttttcc-tattttaaagcttgtaaatccgagtttaatgcattgtcttgaggttttag 228  Q
    ||||||| |||||||||||||||||| || ||||||| |||||| | || ||||||||  |||||||||| ||||||    
T  21276696 gctgttacaaaactctttggttttccttaatttaaagtttgtaatttcgtgtttaatgtcttgtcttgagattttag 21276772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 7197364 - 7197419
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  | |||||||||||||||||| ||||||||||    
T  7197364 cttcttgtcttgggattgttggataattctaatgacttaatcctaatcaaaccaag 7197419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 17169095 - 17169150
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaa 595  Q
    |||| |||||| |||||||||| |||| || |||||| ||||||||||||||||||    
T  17169095 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaa 17169150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 595
Target Start/End: Original strand, 17174655 - 17174710
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaa 595  Q
    |||| |||||| |||||||||| |||| || |||||| ||||||||||||||||||    
T  17174655 atttcatcatcacaaatatcaagcgaaggatcgaaagatgaagtttgatattggaa 17174710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 438
Target Start/End: Original strand, 17464909 - 17464944
Alignment:
Q  403 tttacattcagtcatttacaattatacaatttattt 438  Q
    ||||||||||||||||||||||||| ||||||||||    
T  17464909 tttacattcagtcatttacaattatgcaatttattt 17464944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 523
Target Start/End: Complemental strand, 36709646 - 36709600
Alignment:
Q  476 attgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 523  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  36709646 attgttggaat-gtctaatgactaaatcctattcaaaccaagtctaga 36709600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 3371768 - 3371814
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3371768 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3371814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 3419206 - 3419252
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3419206 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3419252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 6518521 - 6518567
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  6518521 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 6518567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 9857350 - 9857404
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  9857350 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaa 9857404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 9945090 - 9945136
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9945090 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9945136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 10631517 - 10631563
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  10631517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 10631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 12808128 - 12808074
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  12808128 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 12808074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 475 - 517
Target Start/End: Complemental strand, 13883401 - 13883359
Alignment:
Q  475 gattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||  ||||||||||| |||||||||||||||||||    
T  13883401 gattgttggatgagtctaatgacctaatcctattcaaaccaag 13883359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 14653424 - 14653378
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14653424 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14653378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 14690773 - 14690727
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14690773 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14690727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 16683510 - 16683556
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16683510 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16683556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 18078829 - 18078875
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  18078829 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 18078875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 5717537 - 5717582
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  5717537 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 5717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 18080893 - 18080848
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  18080893 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 18080848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 592
Target Start/End: Complemental strand, 53000328 - 53000287
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattg 592  Q
    ||||||||||||||||| || |||||||||||| ||||||||    
T  53000328 tcaaatatcaaacgaattactgaaaggtgaagtatgatattg 53000287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 515
Target Start/End: Original strand, 3392093 - 3392137
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 515  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  3392093 ttgggattgttggataagtctaatgacataatcctaatcaaacca 3392137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 461 - 517
Target Start/End: Original strand, 10731280 - 10731336
Alignment:
Q  461 ccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    |||||| || ||||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  10731280 ccttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaatcaag 10731336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 461 - 517
Target Start/End: Original strand, 10945049 - 10945105
Alignment:
Q  461 ccttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    |||||| || ||||||||||||||  ||||||||||| |||||||| ||||| ||||    
T  10945049 ccttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaatcaag 10945105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 523
Target Start/End: Complemental strand, 17295575 - 17295524
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagtttaga 523  Q
    |||||||||||||||  ||||||||||| ||||||||||||| ||||| ||||    
T  17295575 ttgggattgttggaag-gtctaatgactaaatcctattcaaatcaagtctaga 17295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 36654294 - 36654250
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaacca 515  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  36654294 ttgggattgttggataagtctaatgacataatcctaatcaaacca 36654250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 551 - 606
Target Start/End: Complemental strand, 31817684 - 31817629
Alignment:
Q  551 tcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaaacgagatt 606  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  31817684 tcaaatatcaaacgaaggaccgaaaggtgaagtttgatattagaacaaatgagatt 31817629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 23523891 - 23523836
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  23523891 cttcttgttttgggattgttggatgagtctaatgacttaatcctaatcaaaccaag 23523836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 25964058 - 25964113
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25964058 cttcttgtattgggattgttggataagtctaatgacataatcctaatcaaaccaag 25964113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 25968705 - 25968760
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25968705 cttcttgtattgggattgttggataagtctaatgacataatcctaatcaaaccaag 25968760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 13168526 - 13168572
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  13168526 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 13168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 596
Target Start/End: Original strand, 17756829 - 17756885
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaac 596  Q
    |||| |||||||||||||||||||||| || | |||| ||||||| |||||||||||    
T  17756829 atttcatcatctcaaatatcaaacgaaggatcaaaagatgaagttagatattggaac 17756885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 5399371 - 5399426
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  5399371 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 5399426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 18396443 - 18396388
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  |||||||||| ||||||||| ||||||||||    
T  18396443 cttcttgtcttgggattgttggacaagtctaatgatttaatcctaatcaaaccaag 18396388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 20218419 - 20218364
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  20218419 cttcttgtcttgggattgttggatgagtctaatgacataatcctaatcaaaccaag 20218364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Complemental strand, 22112444 - 22112389
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22112444 cttcttgtcttgggattgttggatgagtctaatgacataatcctaatcaaaccaag 22112389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 4188292 - 4188338
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4188292 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 4188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 8603651 - 8603697
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8603651 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8603697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 15700333 - 15700379
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  15700333 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 15700379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 17743654 - 17743700
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  17743654 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 17743700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 19075283 - 19075237
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19075283 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19075237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 22005916 - 22005962
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  22005916 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 22005962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 25786301 - 25786255
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  25786301 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 25786255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 26138804 - 26138858
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  26138804 cttcttgtcttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 26138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 520
Target Start/End: Original strand, 30245344 - 30245402
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||| || ||||||||||||||  ||||||||||| ||||| || |||||||||||||    
T  30245344 cttcttgtcttgggattgttggataagtctaatgacataatcatagtcaaaccaagttt 30245402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 4741136 - 4741181
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  4741136 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaa 4741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 516
Target Start/End: Complemental strand, 20993706 - 20993661
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaa 516  Q
    ||||||||||||||  ||||||||||| |||||||| |||||||||    
T  20993706 ttgggattgttggataagtctaatgacataatcctaatcaaaccaa 20993661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 28973997 - 28974041
Alignment:
Q  475 gattgttggaatagtctaatgacttaatcctattcaaaccaagtt 519  Q
    ||||||||||||| |||||||||| ||||||| |||| |||||||    
T  28973997 gattgttggaataatctaatgactcaatcctaatcaacccaagtt 28974041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 1802 - 1848
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||    
T  1802 ttgggattgttggatgagtctaatgacctaatcctattcaaaccaag 1848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 8772 - 8716
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaagt 518  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| |||||||||||    
T  8772 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaagt 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 517
Target Start/End: Original strand, 77972 - 78027
Alignment:
Q  462 cttctagtattgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||| || ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  77972 cttcttgtcttgggattgttggataagtctaatgacataatcctaatcaaaccaag 78027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 1618 - 1572
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1618 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 2995 - 2949
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  2995 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 598
Target Start/End: Original strand, 3777 - 3835
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 598  Q
    |||| |||||| ||||||||||  ||| || |||||| |||||||||||||||||||||    
T  3777 atttcatcatcacaaatatcaagagaaggatcgaaagatgaagtttgatattggaacaa 3835  T

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Target: scaffold0847 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 598
Target Start/End: Original strand, 3942 - 4000
Alignment:
Q  540 atttgatcatctcaaatatcaaacgaatgaccgaaaggtgaagtttgatattggaacaa 598  Q
    |||| |||||| ||||||||||  ||| || |||||| |||||||||||||||||||||    
T  3942 atttcatcatcacaaatatcaagagaaggatcgaaagatgaagtttgatattggaacaa 4000  T

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Target: scaffold0816 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 1269 - 1223
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  1269 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 1223  T

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Target: scaffold0673 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 3153 - 3107
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  3153 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 3107  T

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Target: scaffold0624 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 4830 - 4876
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  4830 ttgggattgttggataagtctaatgacgtaatcctaatcaaaccaag 4876  T

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Target: scaffold0607 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 9658 - 9704
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  9658 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 9704  T

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Target: scaffold0489 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 821 - 867
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  821 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 867  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 8887 - 8933
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  8887 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 8933  T

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Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 16413 - 16459
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  16413 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 16459  T

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Target: scaffold0215 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 78 - 32
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  78 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 32  T

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Target: scaffold0146 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 38219 - 38265
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  38219 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 38265  T

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Target: scaffold0111 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 34983 - 34937
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  34983 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 34937  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 19585 - 19631
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  19585 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 19631  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 32232 - 32186
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  32232 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 32186  T

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Target: scaffold0071; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 37132 - 37178
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  37132 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 37178  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 14517 - 14471
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  14517 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 14471  T

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Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 49965 - 49919
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  49965 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 49919  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 117904 - 117950
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  117904 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 117950  T

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Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Original strand, 124148 - 124194
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  124148 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 124194  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 33320 - 33274
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  33320 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 33274  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 369449 - 369403
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaag 517  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||||    
T  369449 ttgggattgttggataagtctaatgacataatcctaatcaaaccaag 369403  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 8790 - 8741
Alignment:
Q  471 ttgggattgttggaatagtctaatgacttaatcctattcaaaccaagttt 520  Q
    ||||||||||| ||  ||||||||||| |||||||| |||||||||||||    
T  8790 ttgggattgtttgataagtctaatgacataatcctaatcaaaccaagttt 8741  T

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