View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8921_low_3 (Length: 1103)
Name: NF8921_low_3
Description: NF8921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8921_low_3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 1046; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 1046; E-Value: 0
Query Start/End: Original strand, 1 - 1082
Target Start/End: Original strand, 54948505 - 54949586
Alignment:
| Q |
1 |
agtgttcgaaccaacaggaatacctcaagggttctctatgttaggcagctacagccaacccaacaacaaacctctttttgggtatgttcttgtggcaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
54948505 |
agtgttcgaaccaacaggaatacctcaaggattctctatgttaggcagctacagccaacccaacaacaaacctctttttgggtatgttcttgtagcaaaa |
54948604 |
T |
|
| Q |
101 |
gatgtttcttcaagcactacaaaaagcacattaaagccaccaattgattacacatttgtattgaaagctaaatcctattcagctactcaagtcttgcctt |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54948605 |
gatgtttcttcaagcaccacaaaaagcacattaaagccaccaattgattacacatttgtattgaaagctaaatcctattcagctactcaagtcttgcctt |
54948704 |
T |
|
| Q |
201 |
tgtatatttggctaccagtagcccctaatggctaccgtgctttaggccatgttgtcaccgaaacacgagacaaacctccccttgacaaaatcatgtgtgt |
300 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54948705 |
tgtatatttggctaccagtagcacctaatggctaccgtgctttaggccatgttgtcaccaaaacacgagacaaacctccccttgacaaaatcatgtgtgt |
54948804 |
T |
|
| Q |
301 |
tagatcagacctcacagagaaatgcgaaacttcttcgttgatttgggaatccgaagacttcaatttctatgacgttagaccaataagtagaggaactcaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54948805 |
tagatcagacctcacagagaaatgcgaaacttcttcgttgatttgggaatccgaagacttcaatttctatgacgttagaccaataagtagaggaactcaa |
54948904 |
T |
|
| Q |
401 |
gctcgaggcattcatgtaggtacttttgttgcacaaaatggtagacttactaaccctccatctatttcatgtttgaaaaaccttaattccatttcaaaga |
500 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54948905 |
gctcgaggcattcatgtaggcacttttgttgcacaaaatggtagacttactaaccctccatctatttcatgtttgaaaaaccttaattccatttcaaaga |
54949004 |
T |
|
| Q |
501 |
tcatgcctaatctacaacaaattaaagcaatactcaaagtttactctccatttctatacctacatcctgatgaaaaatacttaccttcatcagtcaattg |
600 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54949005 |
tcatgcctaatctacaacaaattaaagcaatactcaaagtttactctccatttgtatacctacatcctgatgaaaaatacttaccttcatcagtcaattg |
54949104 |
T |
|
| Q |
601 |
gtttttctccaatggagcattactatacaagaaaggtgatgagtcaaatcctagaccaatagcacaaaatggtactaaccttcctcagggtcctaatcct |
700 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54949105 |
gtttttctccaatggagcattactatacaagaaaggtcatgagtcaaatcctagaccaatagcacaaaatggtactaaccttcctcagggtcctaatcct |
54949204 |
T |
|
| Q |
701 |
aaacatgaccgcgcctattggatagacctaccagctgatcatgcaaataaagatagggtaaagcaaggtaatttacaaagtgcggaatcttatgtacatg |
800 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54949205 |
aaacatgaccgcgcctattggatagacctaccagctgatcatgcaaataaagatagggtaaagcaaggtaatttacaaagtgcggaatcttatgtacatg |
54949304 |
T |
|
| Q |
801 |
ttaagccaatgtttggaggaaccttcactgattttgcaatgtggactttttaccctttcaatggacctggaaggttaaaaatagggtttataaatattaa |
900 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54949305 |
tgaagccaatgtttggaggaaccttcactgattttgcaatgtggactttttaccctttcaatggacctggaaggttaaaaatagggtttataaatattaa |
54949404 |
T |
|
| Q |
901 |
attagagagaataggtgaacatgttggtgactgggagcatgtgacattaagggtaagtaatttggatggtaaattatggaaagtctatttctcacatcat |
1000 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54949405 |
attagagagaataggtgaacatgttggtgactgggagcatgtgacattaagggtaagtaatttggatggtaaattatggaaagtctatttctcacatcat |
54949504 |
T |
|
| Q |
1001 |
aagacaggttcatgggttgattcctctcaacttgaattccaaaatgatactagcaatattgattttccaacaaaaagacctg |
1082 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54949505 |
aagacaggttcatgggttgattcctctcaacttgaattccaaaatgatactagcaatattgattttccaacaaaaagacctg |
54949586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 384; Significance: 0; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 8 - 1035
Target Start/End: Original strand, 26355455 - 26356476
Alignment:
| Q |
8 |
gaaccaacaggaatacctcaagggttctctatgttaggcagctacagccaacccaacaacaaacctctttttgggtatgttcttgtggcaaaagatgttt |
107 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
26355455 |
gaaccaacaggtatacctcaaggattctctatgttgggttgctacagccaacctaacaacaaacctctttttggatatgttcttgtggcaaaggatgttt |
26355554 |
T |
|
| Q |
108 |
cttcaagcactacaaaaagcacattaaagccaccaattgattacacatttgtattgaaagc-taaatcctattcagct-actcaagtcttgcctttgtat |
205 |
Q |
| |
|
||||||| ||||| || ||||| |||||| |||||||||||| ||| |||||||||| | | || ||||| || | | ||||| | | ||| |
|
|
| T |
26355555 |
cttcaagtactactaatagcactttaaagaaaccaattgattatacacttgtattgaacacatcaa--ctattaaggttaatcaagataccacatgttat |
26355652 |
T |
|
| Q |
206 |
atttggctaccagtagcccctaatggctaccgtgctttaggccatgttgtcaccgaaacacgagacaaacctccccttgacaaaatcatgtgtgttagat |
305 |
Q |
| |
|
|||||| ||||| |||| ||| |||| ||| |||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||| |||| |
|
|
| T |
26355653 |
atttggttaccaatagcacctgatggttacaaagctttaggccatgttgtcaccgcaacacaagataaaccttcccttgacaaaatcatgtgtgtcagat |
26355752 |
T |
|
| Q |
306 |
cagacctcacagagaaatgcgaaacttcttcgttgatttgggaatccgaagacttcaatttctatgacgttagaccaataagtagaggaactcaagctcg |
405 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| ||| |||| ||| | ||||||||||| ||||| |||||||| || | ||||||||||||||||| |
|
|
| T |
26355753 |
cagacctcacagaccaatgcgagtcttcttcgtggatctggggatcaaacgacttcaatttttatgatgttagaccgatcaatagaggaactcaagctcc |
26355852 |
T |
|
| Q |
406 |
aggcattcatgtaggtacttttgttgcacaaaatggtagacttactaaccctccatctatttcatgtttgaaaaaccttaattccatttcaaagatcatg |
505 |
Q |
| |
|
|| |||| || || | |||||||||||||||||| | || || ||||||||||||||||||||||||||| || ||||| ||||| || |||||| |
|
|
| T |
26355853 |
cggtgttcacgttggcgcctttgttgcacaaaatggtgggactaatatccctccatctatttcatgtttgaaaaatctcaattcaatttccaaaatcatg |
26355952 |
T |
|
| Q |
506 |
cctaatctacaacaaattaaagcaatactcaaagtttactctccatttctatacctacatcctgatgaaaaatacttaccttcatcagtcaattggtttt |
605 |
Q |
| |
|
|| |||||| ||||||| | |||||||||||||||||||||||||| | ||| |||||||||||||| ||||||||||||| || || |||||||||| |
|
|
| T |
26355953 |
ccaaatctagtacaaattgatgcaatactcaaagtttactctccattgatgtacttacatcctgatgaagaatacttaccttcctcggttaattggtttt |
26356052 |
T |
|
| Q |
606 |
tctccaatggagcattactatacaagaaaggtgatgagtcaaatcctagaccaatagcacaaaatggtactaaccttcctcagggtcctaatcctaaaca |
705 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| | |
|
|
| T |
26356053 |
tctccaatggagcattactatacaaaaaaggtgaagagtcaaatcctgttccaatagcacaaaatggtattaaccttcctcagg------atcctaacaa |
26356146 |
T |
|
| Q |
706 |
tgaccgcgcctattggatagacctaccagctgatcatgcaaataaagatagggtaaagcaaggtaatttacaaagtgcggaatcttatgtacatgttaag |
805 |
Q |
| |
|
||| | ||||||| | ||||||||| ||||| ||||||| ||||| |||||||| |||| |||||||||||||| ||||||||||||||||| || |
|
|
| T |
26356147 |
tgatggtatctattggcttgacctaccatctgatgatgcaaacaaagagagggtaaaaaaaggaaatttacaaagtgcagaatcttatgtacatgtgaaa |
26356246 |
T |
|
| Q |
806 |
ccaatgtttggaggaaccttcactgattttgcaatgtggactttttaccctttcaatggacctggaaggttaaaaatagggtttataaatattaaattag |
905 |
Q |
| |
|
|||||| |||||||||||||||| ||| |||| ||||||| |||||||||||| |||||||| ||||| |||| | |||||||||| ||||||||| |
|
|
| T |
26356247 |
ccaatgcttggaggaaccttcacagatattgccatgtggattttttacccttttaatggaccaggaagagcaaaagtgaagtttataaatgttaaattag |
26356346 |
T |
|
| Q |
906 |
agagaataggtgaacatgttggtgactgggagcatgtgacattaagggtaagtaatttggatggtaaattatggaaagtctatttctcacatcataagac |
1005 |
Q |
| |
|
|| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| |||| | |
|
|
| T |
26356347 |
ggaaaataggtgaacatattggtgattgggagcatgtgacattaagggtaagtaatttggatggtaaattatggcatttatatttctcacaacatagtaa |
26356446 |
T |
|
| Q |
1006 |
aggttcatgggttgattcctctcaacttga |
1035 |
Q |
| |
|
|||| |||| ||||||| ||||| ||||| |
|
|
| T |
26356447 |
aggtgaatggattgattcttctcagcttga |
26356476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 8 - 1042
Target Start/End: Complemental strand, 26348973 - 26347945
Alignment:
| Q |
8 |
gaaccaacaggaatacctcaagggttctctatgttaggcagctacagccaacccaacaacaaacctctttttgggtatgttcttgtggcaaaagatgttt |
107 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||| || ||||||||||| |||||| |||| ||||| ||||||| |
|
|
| T |
26348973 |
gaaccaacaggaatacctaaaggattctctatgttaggtagctacagccaaccaaacaataagcctctttttggatatgtttttgtagcaaaggatgttt |
26348874 |
T |
|
| Q |
108 |
cttcaagcactacaaaaagcacattaaagccaccaattgattacacatttgtattgaaagctaaatcctattcagctactcaagtcttgcctttgtatat |
207 |
Q |
| |
|
||||||| || ||| || || ||||| |||||| ||||||||||| |||||| ||| | ||||| |||||||||| | || | ||||| |
|
|
| T |
26348873 |
cttcaagtaccacaggtagaactttaaaaccaccagttgattacacacttgtatcgaacaccgcatccttcaaggctactcaagattccactctttatat |
26348774 |
T |
|
| Q |
208 |
ttggctaccagtagcccctaatggctaccgtgctttaggccatgttgtcaccgaaacacgagacaaacctccccttgacaaaatcatgtgtgttagatca |
307 |
Q |
| |
|
|||| ||||| |||| |||||||| ||| |||||||| |||||||||||| ||||| ||| |||||| | |||||||||||||||||||| |||||| |
|
|
| T |
26348773 |
ttggttaccaatagcacctaatggatacaaagctttaggacatgttgtcaccacaacacaagataaaccttcacttgacaaaatcatgtgtgtcagatca |
26348674 |
T |
|
| Q |
308 |
gacctcacagagaaatgcgaaacttcttcgttgatttgggaatccgaagacttcaatttctatgacgttagaccaataagtagaggaactcaagctcgag |
407 |
Q |
| |
|
||||||||||| |||| || ||||||||| |||||||| ||| | ||||||||||||| | ||||||||||| | ||||||||||||||||| | |
|
|
| T |
26348673 |
gacctcacagaccaatgtgagtcttcttcgtggatttggggatcaaacaacttcaatttctacaatgttagaccaatcaatagaggaactcaagctcctg |
26348574 |
T |
|
| Q |
408 |
gcattcatgtaggtacttttgttgcacaaaatggtagacttactaaccctccatctatttcatgtttgaaaaaccttaattccatttcaaagatcatgcc |
507 |
Q |
| |
|
| ||| || ||||| || |||| ||||||||| | ||||||||||||||| |||||||||||||| || || ||||| |||||| | |||||||| |
|
|
| T |
26348573 |
gtgttcgagtcggtaccttctttgctcaaaatggtgggaatactaaccctccatcaatttcatgtttgaagaatctcaattctatttcacaaatcatgcc |
26348474 |
T |
|
| Q |
508 |
taatctacaacaaattaaagcaatactcaaagtttactctccatttctatacctacatcctgatgaaaaatacttaccttcatcagtcaattggtttttc |
607 |
Q |
| |
|
|||| | |||||||| | ||||| ||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||| || || |||||||||||| |
|
|
| T |
26348473 |
taataaaaaacaaattgaggcaatgctccaagtttactctccatttctatacttacattctgatgaagaatacttaccttcctcggttaattggtttttc |
26348374 |
T |
|
| Q |
608 |
tccaatggagcattactatacaagaaaggtgatgagtcaaatcctagaccaatagcacaaaatggtactaaccttcctcagggtcctaatcctaaacatg |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||||||||||| ||| ||| | || |
|
|
| T |
26348373 |
tccaatggagcattactatacaagaaaggtgaagaatcaaatcctgttcccatagcacaaaatggtactaaccttcctcaggatcccaatac------tg |
26348280 |
T |
|
| Q |
708 |
accgcgcctattggatagacctaccagctgatcatgcaaataaagatagggtaaagcaaggtaatttacaaagtgcggaatcttatgtacatgttaagcc |
807 |
Q |
| |
|
| | |||||||||||||||||||| |||||| |||||| ||||| || || ||| |||||||| |||||||||| ||||| || |||||||| || || |
|
|
| T |
26348279 |
atggtgcctattggatagacctacctgctgatgctgcaaacaaagagagagtcaagaaaggtaatctacaaagtgcagaatcatacgtacatgtgaaacc |
26348180 |
T |
|
| Q |
808 |
aatgtttggaggaaccttcactgattttgcaatgtggactttttaccctttcaatggacctggaaggttaaaaatagggtttataaatattaaattagag |
907 |
Q |
| |
|
||||| ||||||||| ||||||||| |||| |||||| |||||||||||| ||||||||||| || |||| | | ||| ||||| | ||||||| | |
|
|
| T |
26348179 |
aatgtatggaggaacattcactgatattgccatgtgggttttttacccttttaatggacctgggagagcaaaagtggagttcttaaatgtgaaattaggg |
26348080 |
T |
|
| Q |
908 |
agaataggtgaacatgttggtgactgggagcatgtgacattaagggtaagtaatttggatggtaaattatggaaagtctatttctcacatcataagacag |
1007 |
Q |
| |
|
| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| | || ||||||||||| ||||| | |
|
|
| T |
26348079 |
aaaataggtgaacatgttggtgattgggagcacgtgacattaagggtaagtaatttggatggtcaattatggcatgtatatttctcacaacataatcttg |
26347980 |
T |
|
| Q |
1008 |
gttcatgggttgattcctctcaacttgaattccaa |
1042 |
Q |
| |
|
|||||||| ||||||| || |||||||| |||||| |
|
|
| T |
26347979 |
gttcatggattgattcatcccaacttgagttccaa |
26347945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 35 - 1082
Target Start/End: Complemental strand, 26333713 - 26332672
Alignment:
| Q |
35 |
tctatgttaggcagctacagccaacccaacaacaaacctctttttgggtatgttcttgtggcaaaagatgtttcttcaagcactacaaaaagcacattaa |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||| ||| || || || |||| |||| |
|
|
| T |
26333713 |
tctatgttaggcagctacagccaacccaacaacaaacctctttttggatatgttcttgcagcaaaggatatttcaggaagtaccactaatggcactttaa |
26333614 |
T |
|
| Q |
135 |
agccaccaattgattacacatttgtattgaaagctaaatcctattcagctactcaagtcttgcctttgtatatttggctaccagtagcccctaatggcta |
234 |
Q |
| |
|
|||||||| ||||||||||||| |||| || | |||| | | ||||| || ||||||||||||||| |||| |||| ||| ||||||| |
|
|
| T |
26333613 |
agccaccagttgattacacattagtatcaaacaccgcatccgtcatggttgatcaagactcccctttgtatatttggttaccgatagcacctgatggcta |
26333514 |
T |
|
| Q |
235 |
ccgtgctttaggccatgttgtcaccgaaacacgagacaaacctccccttgacaaaatcatgtgtgttagatcagacctcacagagaaatgcgaaacttct |
334 |
Q |
| |
|
|| |||| ||||||||||||||||| ||||| |||||||||| ||| |||||| |||||||||| ||| |||||||||| ||| |||| || ||||| |
|
|
| T |
26333513 |
ccatgctgtaggccatgttgtcaccacaacacaagacaaaccttcccccgacaaagtcatgtgtgtcagagcagacctcactgagcaatgtgagtcttct |
26333414 |
T |
|
| Q |
335 |
tcgttgatttgggaatccgaagacttcaatttctatgacgttagaccaataagtagaggaactcaagctcgaggcattcatgtaggtacttttgttgcac |
434 |
Q |
| |
|
| | |||||||| ||| | ||||| |||||||| |||||||||||||| | |||||||| | |||||| || ||| || || || || ||||| | |
|
|
| T |
26333413 |
acatggatttggggatcaaacgacttaaatttctacgacgttagaccaattaatagaggaagtaaagctcccggtgttcgcgttggcaccttcgttgctc |
26333314 |
T |
|
| Q |
435 |
aaaatggtagacttactaaccctccatctatttcatgtttgaaaaaccttaattccatttcaaagatcatgcctaatctacaacaaattaaagcaatact |
534 |
Q |
| |
|
|||||||| | ||||||||||||||| ||||| |||||||| || || ||||| |||||| | ||||||||||||| | ||||||| | || |||| |
|
|
| T |
26333313 |
aaaatggtgggaatactaaccctccatcaatttcgtgtttgaagaatctcaattctatttcacaaatcatgcctaatcaaacacaaattgagacattact |
26333214 |
T |
|
| Q |
535 |
caaagtttactctccatttctatacctacatcctgatgaaaaatacttaccttcatcagtcaattggtttttctccaatggagcattactatacaagaaa |
634 |
Q |
| |
|
| | |||||||||||| |||||| |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26333213 |
ccactcttactctccattcctatacttacatcctgatgaagaatacttaccttcctctgtcaattggtttttctccaatggagcgttactatacaagaaa |
26333114 |
T |
|
| Q |
635 |
ggtgatgagtcaaatcctagaccaatagcacaaaatggtactaaccttcctcagggtcctaatcctaaacatgaccgcgcctattggatagacctaccag |
734 |
Q |
| |
|
||||| |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||| | ||||||||| | |||||||| | |
|
|
| T |
26333113 |
ggtgaagagtcaaatcctgttccaatagaacaaaatggtactaaccttcctcagg------atcctaacaatgatggtgcctattggcttgacctacctg |
26333020 |
T |
|
| Q |
735 |
ctgatcatgcaaataaagatagggtaaagcaaggtaatttacaaagtgcggaatcttatgtacatgttaagccaatgtttggaggaaccttcactgattt |
834 |
Q |
| |
|
|||| ||||||| ||||| ||||| |||||||||||| |||||||||| ||||| ||||||||||| || ||||||| ||||||||| ||||||||| | |
|
|
| T |
26333019 |
ttgatgatgcaaacaaagaaagggtcaagcaaggtaatctacaaagtgcagaatcatatgtacatgtgaaaccaatgtatggaggaacattcactgatat |
26332920 |
T |
|
| Q |
835 |
tgcaatgtggactttttaccctttcaatggacctggaaggttaaaaatagggtttataaatattaaattagagagaataggtgaacatgttggtgactgg |
934 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||| || |||||| |||||||||| ||||||| | | | ||||||||||||||||||| ||| |
|
|
| T |
26332919 |
tgccatgtgggttttttaccctttcaatggacctgcaaaagctaaaataaagtttataaatgttaaattgggaaaagtaggtgaacatgttggtgattgg |
26332820 |
T |
|
| Q |
935 |
gagcatgtgacattaagggtaagtaatttggatggtaaattatggaaagtctatttctcacatcataagacaggttcatgggttgattcctctcaacttg |
1034 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| | |||||| | ||||||||||| || ||||| ||||||||||||||| | |||||||||| |
|
|
| T |
26332819 |
gagcatgtgacattaagggtaagtaacttggatggtcagttatggcatgtctatttctctcaacataatggtggttcatgggttgatgcatctcaacttg |
26332720 |
T |
|
| Q |
1035 |
aattccaaaatgatactagcaatattgattttccaacaaaaagacctg |
1082 |
Q |
| |
|
| || |||| |||| ||||| | |||||||||| ||| ||||||||| |
|
|
| T |
26332719 |
agtttcaaatggataatagcagttttgattttccgacacaaagacctg |
26332672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 34 - 1081
Target Start/End: Complemental strand, 26339032 - 26337994
Alignment:
| Q |
34 |
ctctatgttaggcagctacagccaacccaacaacaaacctctttttgggtatgttcttgtggcaaaagatgtttcttcaagcactacaaaaagcacatta |
133 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||| ||||| ||| |||| || |||| | |||| ||| |
|
|
| T |
26339032 |
ctctatgttaggcagttacagccaacccaacagcaagcctctttttggttatgttcttgtagcaaaggatatttcaggaaagacta---atggcacttta |
26338936 |
T |
|
| Q |
134 |
aagccaccaattgattacacatttgtattgaaagctaaatcctattcagctactcaagtcttgcctttgtatatttggctaccagtagcccctaatggct |
233 |
Q |
| |
|
|||||||| |||||||| || | |||||||| || |||| | | |||||||| || |||||||||| ||||||||| |||| |||||||||| |
|
|
| T |
26338935 |
aagccacctgttgattactcactagtattgaacactgcatccatcacggttactcaagactcttctttgtatatctggctaccaatagcacctaatggct |
26338836 |
T |
|
| Q |
234 |
accgtgctttaggccatgttgtcaccgaaacacgagacaaacctccccttgacaaaatcatgtgtgttagatcagacctcacagagaaatgcgaaacttc |
333 |
Q |
| |
|
||| |||| ||||||||||||||||| |||||| ||| |||||| || ||||| |||||||||| |||||||||||||||||| |||| ||| | || |
|
|
| T |
26338835 |
accatgctgtaggccatgttgtcaccaaaacacaagataaaccttccaccaacaaagtcatgtgtgtcagatcagacctcacagagcaatgtgaatcgtc |
26338736 |
T |
|
| Q |
334 |
ttcgttgatttgggaatccgaagacttcaatttctatgacgttagaccaataagtagaggaactcaagctcgaggcattcatgtaggtacttttgttgca |
433 |
Q |
| |
|
| | |||||||||| ||| | | ||| |||||||| || ||||||||||| | |||||||| | |||||| || ||| || || || || ||||| |
|
|
| T |
26338735 |
tacattgatttggggatcaaacggcttaaatttctacgatgttagaccaattaatagaggaattaaagctctcggtgttcgagttggcacattcgttgct |
26338636 |
T |
|
| Q |
434 |
caaaatggtagacttactaaccctccatctatttcatgtttgaaaaaccttaattccatttcaaagatcatgcctaatctacaacaaattaaagcaatac |
533 |
Q |
| |
|
||||||||| | || |||||| ||||| |||||||||||||| || || |||| ||| || | |||||||||| | | |||||||| | ||| ||| |
|
|
| T |
26338635 |
caaaatggtgggaatattaacccgccatcaatttcatgtttgaagaatattgattctattacacaaatcatgcctagtaaaaaacaaattgatgcactac |
26338536 |
T |
|
| Q |
534 |
tcaaagtttactctccatttctatacctacatcctgatgaaaaatacttaccttcatcagtcaattggtttttctccaatggagcattactatacaagaa |
633 |
Q |
| |
|
|| ||||| | ||||||| ||||| ||||| | |||||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26338535 |
tccaagttaatgctccattcttatacttacattccgatgaagaatacttaccttcctcggttaattggtttttctccaatggagcattactatacaagaa |
26338436 |
T |
|
| Q |
634 |
aggtgatgagtcaaatcctagaccaatagcacaaaatggtactaaccttcctcagggtcctaatcctaaacatgaccgcgcctattggatagacctacca |
733 |
Q |
| |
|
|||| || ||||||||| ||||||||||||||||||| |||||||||||||| |||||| || || | ||| |||| | ||||||||| |
|
|
| T |
26338435 |
aggtcgagaatcaaatcctgttccaatagcacaaaatggtaataaccttcctcaggatcctaacact------gatggttcctgttggcttgacctacca |
26338342 |
T |
|
| Q |
734 |
gctgatcatgcaaataaagatagggtaaagcaaggtaatttacaaagtgcggaatcttatgtacatgttaagccaatgtttggaggaaccttcactgatt |
833 |
Q |
| |
|
| |||| ||||||| ||||| || || ||| |||||||| |||||||||| ||||| ||||||||||| || ||||||| ||||||||| ||||||||| |
|
|
| T |
26338341 |
gttgataatgcaaacaaagagagagtcaagaaaggtaatctacaaagtgcagaatcatatgtacatgtgaaaccaatgtatggaggaacattcactgata |
26338242 |
T |
|
| Q |
834 |
ttgcaatgtggactttttaccctttcaatggacctggaaggttaaaaatagggtttataaatattaaattagagagaataggtgaacatgttggtgactg |
933 |
Q |
| |
|
|||| |||||| |||||| |||||||||||| ||||||| ||| ||| ||||||| |||||||||| | | | |||||||||||||||||| || |
|
|
| T |
26338241 |
ttgccatgtgggttttttatcctttcaatggagctggaagagctaaagtagagtttatagatattaaattgggaaaagcaggtgaacatgttggtgattg |
26338142 |
T |
|
| Q |
934 |
ggagcatgtgacattaagggtaagtaatttggatggtaaattatggaaagtctatttctcacatcataagacaggttcatgggttgattcctctcaactt |
1033 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||| |||||||| | || || ||||| || || || | ||| |||| ||||||| ||||||||| |
|
|
| T |
26338141 |
ggagcatgtgacattaagggtaagtaacttcgatggtcaattatggcatgtatacttctctcaacacaatgctggtaaatggattgattcatctcaactt |
26338042 |
T |
|
| Q |
1034 |
gaattccaaaatgatactagcaatattgattttccaacaaaaagacct |
1081 |
Q |
| |
|
|| ||||||| |||| |||| | | ||||||||||||||||||||||| |
|
|
| T |
26338041 |
gagttccaaagtgatgctagtagttttgattttccaacaaaaagacct |
26337994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 913 - 957
Target Start/End: Complemental strand, 26324912 - 26324868
Alignment:
| Q |
913 |
aggtgaacatgttggtgactgggagcatgtgacattaagggtaag |
957 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
26324912 |
aggtgaacatgtgggagactgggagcatgtgacattaagggtaag |
26324868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 911 - 963
Target Start/End: Complemental strand, 28315338 - 28315286
Alignment:
| Q |
911 |
ataggtgaacatgttggtgactgggagcatgtgacattaagggtaagtaattt |
963 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| || ||||||||||||||||| |
|
|
| T |
28315338 |
ataggtgaacatattggtgattgggagcatgtaactttaagggtaagtaattt |
28315286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 797 - 870
Target Start/End: Complemental strand, 28315455 - 28315382
Alignment:
| Q |
797 |
catgttaagccaatgtttggaggaaccttcactgattttgcaatgtggactttttaccctttcaatggacctgg |
870 |
Q |
| |
|
||||| || ||||| ||||| ||||| || |||||||| || ||||||| |||||||||||| ||||||||||| |
|
|
| T |
28315455 |
catgtaaaaccaatatttggtggaacatttactgatttggccatgtggattttttacccttttaatggacctgg |
28315382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 315
Target Start/End: Complemental strand, 26325562 - 26325531
Alignment:
| Q |
284 |
gacaaaatcatgtgtgttagatcagacctcac |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
26325562 |
gacaaaatcatgtgtgttagatcagacctcac |
26325531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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